AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81818

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81818.t1 MTR_5g076370 92.647 340 25 0 1 340 1 340 0.0 648
MS.gene81818.t1 MTR_5g076660 65.192 339 117 1 1 339 1 338 2.78e-148 421
MS.gene81818.t1 MTR_5g067400 65.287 314 105 2 26 339 4 313 5.92e-143 407
MS.gene81818.t1 MTR_7g024290 66.667 315 100 3 26 339 4 314 3.73e-142 405
MS.gene81818.t1 MTR_1g046640 65.287 314 104 3 26 339 4 312 3.60e-141 402
MS.gene81818.t1 MTR_1g046650 64.013 314 108 3 26 339 4 312 2.89e-139 397
MS.gene81818.t1 MTR_1g046650 63.240 321 113 3 19 339 28 343 3.70e-139 398
MS.gene81818.t1 MTR_5g076720 60.704 341 127 3 2 339 51 387 1.54e-138 398
MS.gene81818.t1 MTR_7g094390 62.538 331 120 2 9 339 148 474 2.55e-137 399
MS.gene81818.t1 MTR_1g046650 65.979 291 95 2 49 339 26 312 5.91e-134 384
MS.gene81818.t1 MTR_2g038420 61.194 335 121 4 10 339 2 332 8.28e-131 377
MS.gene81818.t1 MTR_2g038430 57.434 343 129 4 10 339 2 340 1.06e-127 369
MS.gene81818.t1 MTR_5g061290 60.123 326 118 5 20 339 5 324 2.37e-125 362
MS.gene81818.t1 MTR_5g076810 68.030 269 82 2 72 339 2 267 4.97e-125 360
MS.gene81818.t1 MTR_5g076520 60.127 316 118 4 26 337 4 315 6.09e-120 348
MS.gene81818.t1 MTR_5g076505 58.199 311 118 3 38 339 5 312 8.01e-118 343
MS.gene81818.t1 MTR_1g046650 65.587 247 81 2 93 339 1 243 2.74e-111 324
MS.gene81818.t1 MTR_5g076820 63.178 258 87 4 48 301 33 286 2.37e-103 305
MS.gene81818.t1 MTR_5g076540 64.286 224 79 1 26 249 4 226 2.41e-93 278
MS.gene81818.t1 MTR_5g077020 58.081 198 69 4 76 265 17 208 2.36e-66 209
MS.gene81818.t1 MTR_4g094468 42.500 240 135 3 24 263 88 324 6.92e-61 198
MS.gene81818.t1 MTR_4g058025 76.106 113 26 1 104 215 14 126 5.47e-51 168
MS.gene81818.t1 MTR_5g092700 63.014 73 27 0 267 339 1 73 1.80e-23 95.1
MS.gene81818.t1 MTR_4g073580 63.014 73 27 0 267 339 1 73 1.80e-23 95.1
MS.gene81818.t1 MTR_7g105080 63.014 73 27 0 267 339 1 73 3.82e-23 93.6
MS.gene81818.t1 MTR_3g092130 63.014 73 27 0 267 339 1 73 3.82e-23 93.6
MS.gene81818.t1 MTR_1g059690 63.014 73 27 0 267 339 1 73 3.82e-23 93.6
MS.gene81818.t1 MTR_4g073580 63.014 73 27 0 267 339 1 73 5.28e-23 94.7
MS.gene81818.t1 MTR_4g088485 57.831 83 35 0 257 339 128 210 5.82e-23 95.5
MS.gene81818.t1 MTR_4g088485 63.014 73 27 0 267 339 1 73 1.11e-22 94.7
MS.gene81818.t1 MTR_4g088485 43.373 83 32 1 257 339 67 134 1.71e-12 66.2
MS.gene81818.t1 MTR_1g066390 57.831 83 35 0 257 339 67 149 6.20e-23 95.9
MS.gene81818.t1 MTR_1g066390 57.831 83 35 0 257 339 143 225 6.20e-23 95.9
MS.gene81818.t1 MTR_1g066390 63.014 73 27 0 267 339 1 73 1.16e-22 95.1
MS.gene81818.t1 MTR_8g088060 63.014 73 27 0 267 339 1 73 6.73e-23 93.6
MS.gene81818.t1 MTR_5g033960 63.014 73 27 0 267 339 1 73 7.01e-23 93.6
MS.gene81818.t1 MTR_7g116360 57.831 83 35 0 257 339 67 149 7.58e-23 95.5
MS.gene81818.t1 MTR_7g116360 57.831 83 35 0 257 339 143 225 7.58e-23 95.5
MS.gene81818.t1 MTR_7g116360 63.014 73 27 0 267 339 1 73 1.37e-22 94.7
MS.gene81818.t1 MTR_3g092130 63.014 73 27 0 267 339 1 73 7.90e-23 92.8
MS.gene81818.t1 MTR_7g116360 63.514 74 27 0 266 339 48 121 1.05e-22 96.3
MS.gene81818.t1 MTR_7g116360 57.831 83 35 0 257 339 115 197 1.93e-22 95.5
MS.gene81818.t1 MTR_7g116360 57.831 83 35 0 257 339 191 273 1.93e-22 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 67 149 1.35e-22 95.9
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 143 225 1.35e-22 95.9
MS.gene81818.t1 MTR_8g018230 63.014 73 27 0 267 339 1 73 2.63e-22 95.1
MS.gene81818.t1 MTR_6g061930 57.831 83 35 0 257 339 67 149 2.01e-22 95.5
MS.gene81818.t1 MTR_6g061930 57.831 83 35 0 257 339 204 286 2.01e-22 95.5
MS.gene81818.t1 MTR_6g061930 63.014 73 27 0 267 339 1 73 3.86e-22 94.7
MS.gene81818.t1 MTR_4g080920 56.627 83 36 0 257 339 67 149 2.18e-22 94.4
MS.gene81818.t1 MTR_4g080920 61.644 73 28 0 267 339 1 73 9.41e-22 92.4
MS.gene81818.t1 MTR_4g080920 46.988 83 44 0 257 339 143 225 3.38e-15 74.3
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 67 149 2.85e-22 95.5
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 143 225 2.85e-22 95.5
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 219 301 2.85e-22 95.5
MS.gene81818.t1 MTR_4g081010 63.014 73 27 0 267 339 1 73 4.98e-22 94.7
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 67 149 3.00e-22 95.1
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 143 225 3.00e-22 95.1
MS.gene81818.t1 MTR_4g081010 63.014 73 27 0 267 339 1 73 5.26e-22 94.4
MS.gene81818.t1 MTR_5g061310 61.111 72 28 0 267 338 2 73 3.88e-22 89.0
MS.gene81818.t1 MTR_4g091580 57.831 83 35 0 257 339 295 377 6.63e-22 96.7
MS.gene81818.t1 MTR_4g091580 57.831 83 35 0 257 339 67 149 1.61e-21 95.9
MS.gene81818.t1 MTR_4g091580 57.831 83 35 0 257 339 143 225 1.61e-21 95.9
MS.gene81818.t1 MTR_4g091580 57.831 83 35 0 257 339 219 301 1.61e-21 95.9
MS.gene81818.t1 MTR_4g091580 57.831 83 35 0 257 339 371 453 1.61e-21 95.9
MS.gene81818.t1 MTR_4g091580 57.831 83 35 0 257 339 447 529 1.61e-21 95.9
MS.gene81818.t1 MTR_4g091580 63.014 73 27 0 267 339 1 73 2.64e-21 95.1
MS.gene81818.t1 MTR_4g091580 57.831 83 35 0 257 339 67 149 6.99e-22 95.5
MS.gene81818.t1 MTR_4g091580 57.831 83 35 0 257 339 143 225 6.99e-22 95.5
MS.gene81818.t1 MTR_4g091580 57.831 83 35 0 257 339 295 377 6.99e-22 95.5
MS.gene81818.t1 MTR_4g091580 63.014 73 27 0 267 339 1 73 1.18e-21 95.1
MS.gene81818.t1 MTR_4g091580 56.627 83 36 0 257 339 219 301 2.48e-21 94.0
MS.gene81818.t1 MTR_8g081020 57.831 83 35 0 257 339 67 149 6.99e-22 95.5
MS.gene81818.t1 MTR_8g081020 57.831 83 35 0 257 339 143 225 6.99e-22 95.5
MS.gene81818.t1 MTR_8g081020 57.831 83 35 0 257 339 219 301 6.99e-22 95.5
MS.gene81818.t1 MTR_8g081020 57.831 83 35 0 257 339 295 377 6.99e-22 95.5
MS.gene81818.t1 MTR_8g081020 63.014 73 27 0 267 339 1 73 1.18e-21 95.1
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 67 149 7.20e-22 95.5
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 143 225 7.20e-22 95.5
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 219 301 7.20e-22 95.5
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 295 377 7.20e-22 95.5
MS.gene81818.t1 MTR_4g081010 63.014 73 27 0 267 339 1 73 1.22e-21 95.1
MS.gene81818.t1 MTR_4g080797 57.831 83 35 0 257 339 67 149 7.34e-22 95.5
MS.gene81818.t1 MTR_4g080797 57.831 83 35 0 257 339 143 225 7.34e-22 95.5
MS.gene81818.t1 MTR_4g080797 57.831 83 35 0 257 339 219 301 7.34e-22 95.5
MS.gene81818.t1 MTR_4g080797 57.831 83 35 0 257 339 295 377 7.34e-22 95.5
MS.gene81818.t1 MTR_4g080797 63.014 73 27 0 267 339 1 73 1.23e-21 95.1
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 67 149 7.34e-22 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 143 225 7.34e-22 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 219 301 7.34e-22 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 295 377 7.34e-22 95.5
MS.gene81818.t1 MTR_8g018230 63.014 73 27 0 267 339 1 73 1.23e-21 95.1
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 67 149 1.29e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 143 225 1.29e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 219 301 1.29e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 295 377 1.29e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 371 453 1.29e-21 95.5
MS.gene81818.t1 MTR_8g018230 63.014 73 27 0 267 339 1 73 2.15e-21 95.1
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 67 149 1.29e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 143 225 1.29e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 219 301 1.29e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 295 377 1.29e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 371 453 1.29e-21 95.5
MS.gene81818.t1 MTR_8g018230 63.014 73 27 0 267 339 1 73 2.15e-21 95.1
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 67 149 1.67e-21 95.5
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 143 225 1.67e-21 95.5
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 219 301 1.67e-21 95.5
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 295 377 1.67e-21 95.5
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 371 453 1.67e-21 95.5
MS.gene81818.t1 MTR_4g081010 57.831 83 35 0 257 339 447 529 1.67e-21 95.5
MS.gene81818.t1 MTR_4g081010 63.014 73 27 0 267 339 1 73 2.72e-21 95.1
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 67 149 1.75e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 143 225 1.75e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 219 301 1.75e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 295 377 1.75e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 371 453 1.75e-21 95.5
MS.gene81818.t1 MTR_8g018230 57.831 83 35 0 257 339 447 529 1.75e-21 95.5
MS.gene81818.t1 MTR_8g018230 63.014 73 27 0 267 339 1 73 2.85e-21 95.1
MS.gene81818.t1 MTR_8g479250 60.241 83 33 0 257 339 131 213 1.92e-21 93.2
MS.gene81818.t1 MTR_8g479250 45.238 84 35 1 257 340 207 279 2.44e-13 70.1
MS.gene81818.t1 MTR_4g088495 57.831 83 35 0 257 339 67 149 2.23e-21 95.9
MS.gene81818.t1 MTR_4g088495 57.831 83 35 0 257 339 143 225 2.23e-21 95.9
MS.gene81818.t1 MTR_4g088495 57.831 83 35 0 257 339 219 301 2.23e-21 95.9
MS.gene81818.t1 MTR_4g088495 57.831 83 35 0 257 339 295 377 2.23e-21 95.9
MS.gene81818.t1 MTR_4g088495 57.831 83 35 0 257 339 371 453 2.23e-21 95.9
MS.gene81818.t1 MTR_4g088495 57.831 83 35 0 257 339 447 529 2.23e-21 95.9
MS.gene81818.t1 MTR_4g088495 57.831 83 35 0 257 339 523 605 2.23e-21 95.9
MS.gene81818.t1 MTR_4g088495 57.831 83 35 0 257 339 599 681 2.23e-21 95.9
MS.gene81818.t1 MTR_4g088495 57.831 83 35 0 257 339 675 757 2.23e-21 95.9
MS.gene81818.t1 MTR_4g088495 57.831 83 35 0 257 339 751 833 2.23e-21 95.9
MS.gene81818.t1 MTR_4g088495 63.014 73 27 0 267 339 1 73 4.39e-21 94.7
MS.gene81818.t1 MTR_8g038370 28.070 228 139 8 26 236 105 324 2.54e-18 85.1
MS.gene81818.t1 MTR_5g076740 59.211 76 28 2 266 338 85 160 3.00e-18 81.3
MS.gene81818.t1 MTR_5g076350 55.405 74 32 1 267 339 8 81 1.45e-17 77.0
MS.gene81818.t1 MTR_1g054335 26.829 246 158 9 42 267 62 305 1.82e-17 82.0
MS.gene81818.t1 MTR_5g076760 64.912 57 20 0 277 333 5 61 2.23e-17 76.3
MS.gene81818.t1 MTR_7g093600 26.582 237 156 7 48 268 73 307 2.53e-17 81.6
MS.gene81818.t1 MTR_3g017590 25.118 211 147 6 34 234 54 263 3.38e-17 81.3
MS.gene81818.t1 MTR_3g091510 27.049 244 161 7 34 261 61 303 5.61e-17 80.9
MS.gene81818.t1 MTR_7g085590 27.717 184 117 4 34 215 64 233 7.71e-17 80.1
MS.gene81818.t1 MTR_8g027520 26.506 249 168 7 34 268 54 301 2.94e-16 78.6
MS.gene81818.t1 MTR_8g027520 26.506 249 168 7 34 268 45 292 3.25e-16 78.6
MS.gene81818.t1 MTR_1g008120 24.904 261 179 7 17 261 52 311 3.39e-16 78.6
MS.gene81818.t1 MTR_7g117415 24.900 249 172 6 34 268 62 309 1.29e-15 77.0
MS.gene81818.t1 MTR_5g076780 58.065 62 26 0 278 339 1 62 1.71e-15 70.9
MS.gene81818.t1 MTR_5g076340 54.667 75 32 2 267 339 9 83 1.79e-15 71.2
MS.gene81818.t1 MTR_4g009980 51.562 64 31 0 276 339 5 68 7.22e-15 68.9
MS.gene81818.t1 MTR_5g076750 58.000 50 21 0 291 340 17 66 1.21e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81818.t1 AT5G37930 32.400 250 159 3 26 274 103 343 1.00e-40 146
MS.gene81818.t1 AT1G66620 29.457 258 174 6 12 263 19 274 8.58e-33 124
MS.gene81818.t1 AT5G37870 31.250 240 157 6 13 247 24 260 4.71e-32 121
MS.gene81818.t1 AT5G37890 32.389 247 144 8 13 247 30 265 4.27e-31 119
MS.gene81818.t1 AT5G37910 27.801 241 167 4 13 247 15 254 3.35e-28 111
MS.gene81818.t1 AT1G66650 30.579 242 157 7 34 266 84 323 2.42e-27 110
MS.gene81818.t1 AT5G62800 31.720 186 120 5 34 213 41 225 1.43e-24 102
MS.gene81818.t1 AT5G62800 31.720 186 120 5 34 213 41 225 1.55e-24 102
MS.gene81818.t1 AT1G66630 28.571 252 156 7 34 263 47 296 6.22e-24 100
MS.gene81818.t1 AT4G05050 57.831 83 35 0 257 339 67 149 1.19e-23 95.5
MS.gene81818.t1 AT4G05050 63.014 73 27 0 267 339 1 73 2.34e-23 94.7
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 67 149 1.19e-23 95.5
MS.gene81818.t1 AT4G05320 63.014 73 27 0 267 339 1 73 2.34e-23 94.7
MS.gene81818.t1 AT2G35635 63.014 73 27 0 267 339 1 73 2.21e-23 94.7
MS.gene81818.t1 AT1G31340 63.014 73 27 0 267 339 1 73 2.38e-23 94.7
MS.gene81818.t1 AT2G47110 63.014 73 27 0 267 339 1 73 4.21e-23 94.4
MS.gene81818.t1 AT2G47110 63.014 73 27 0 267 339 1 73 4.21e-23 94.4
MS.gene81818.t1 AT3G62250 63.014 73 27 0 267 339 1 73 4.43e-23 94.4
MS.gene81818.t1 AT1G23410 63.014 73 27 0 267 339 1 73 4.60e-23 94.0
MS.gene81818.t1 AT3G52590 63.014 73 27 0 267 339 1 73 4.87e-23 93.2
MS.gene81818.t1 AT2G36170 63.014 73 27 0 267 339 1 73 4.87e-23 93.2
MS.gene81818.t1 AT4G05050 57.831 83 35 0 257 339 67 149 7.94e-23 95.5
MS.gene81818.t1 AT4G05050 57.831 83 35 0 257 339 143 225 7.94e-23 95.5
MS.gene81818.t1 AT4G05050 63.014 73 27 0 267 339 1 73 1.43e-22 94.7
MS.gene81818.t1 AT4G05050 57.831 83 35 0 257 339 67 149 7.94e-23 95.5
MS.gene81818.t1 AT4G05050 57.831 83 35 0 257 339 143 225 7.94e-23 95.5
MS.gene81818.t1 AT4G05050 63.014 73 27 0 267 339 1 73 1.43e-22 94.7
MS.gene81818.t1 AT4G05050 57.831 83 35 0 257 339 67 149 7.94e-23 95.5
MS.gene81818.t1 AT4G05050 57.831 83 35 0 257 339 143 225 7.94e-23 95.5
MS.gene81818.t1 AT4G05050 63.014 73 27 0 267 339 1 73 1.43e-22 94.7
MS.gene81818.t1 AT4G02890 57.831 83 35 0 257 339 67 149 7.94e-23 95.5
MS.gene81818.t1 AT4G02890 57.831 83 35 0 257 339 143 225 7.94e-23 95.5
MS.gene81818.t1 AT4G02890 63.014 73 27 0 267 339 1 73 1.43e-22 94.7
MS.gene81818.t1 AT4G02890 57.831 83 35 0 257 339 67 149 7.94e-23 95.5
MS.gene81818.t1 AT4G02890 57.831 83 35 0 257 339 143 225 7.94e-23 95.5
MS.gene81818.t1 AT4G02890 63.014 73 27 0 267 339 1 73 1.43e-22 94.7
MS.gene81818.t1 AT5G37640 57.831 83 35 0 257 339 69 151 8.97e-23 97.4
MS.gene81818.t1 AT5G37640 55.422 83 37 0 257 339 145 227 4.74e-20 89.7
MS.gene81818.t1 AT5G37640 56.818 88 35 2 253 339 219 304 1.18e-18 85.9
MS.gene81818.t1 AT5G37640 54.795 73 33 0 267 339 3 75 3.25e-15 75.9
MS.gene81818.t1 AT1G66660 28.030 264 172 7 19 274 89 342 1.06e-22 97.4
MS.gene81818.t1 AT5G03240 57.831 83 35 0 257 339 67 149 2.72e-22 95.5
MS.gene81818.t1 AT5G03240 57.831 83 35 0 257 339 143 225 2.72e-22 95.5
MS.gene81818.t1 AT5G03240 57.831 83 35 0 257 339 219 301 2.72e-22 95.5
MS.gene81818.t1 AT5G03240 63.014 73 27 0 267 339 1 73 4.75e-22 95.1
MS.gene81818.t1 AT5G03240 57.831 83 35 0 257 339 67 149 2.72e-22 95.5
MS.gene81818.t1 AT5G03240 57.831 83 35 0 257 339 143 225 2.72e-22 95.5
MS.gene81818.t1 AT5G03240 57.831 83 35 0 257 339 219 301 2.72e-22 95.5
MS.gene81818.t1 AT5G03240 63.014 73 27 0 267 339 1 73 4.75e-22 95.1
MS.gene81818.t1 AT5G03240 57.831 83 35 0 257 339 67 149 2.72e-22 95.5
MS.gene81818.t1 AT5G03240 57.831 83 35 0 257 339 143 225 2.72e-22 95.5
MS.gene81818.t1 AT5G03240 57.831 83 35 0 257 339 219 301 2.72e-22 95.5
MS.gene81818.t1 AT5G03240 63.014 73 27 0 267 339 1 73 4.75e-22 95.1
MS.gene81818.t1 AT5G20620 57.831 83 35 0 257 339 67 149 2.72e-22 95.5
MS.gene81818.t1 AT5G20620 57.831 83 35 0 257 339 143 225 2.72e-22 95.5
MS.gene81818.t1 AT5G20620 57.831 83 35 0 257 339 219 301 2.72e-22 95.5
MS.gene81818.t1 AT5G20620 63.014 73 27 0 267 339 1 73 4.75e-22 95.1
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 67 149 2.84e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 143 225 2.84e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 219 301 2.84e-22 95.5
MS.gene81818.t1 AT4G05320 63.014 73 27 0 267 339 1 73 4.97e-22 95.1
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 67 149 2.84e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 143 225 2.84e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 219 301 2.84e-22 95.5
MS.gene81818.t1 AT4G05320 63.014 73 27 0 267 339 1 73 4.97e-22 95.1
MS.gene81818.t1 AT4G02890 57.831 83 35 0 257 339 67 149 2.84e-22 95.5
MS.gene81818.t1 AT4G02890 57.831 83 35 0 257 339 143 225 2.84e-22 95.5
MS.gene81818.t1 AT4G02890 57.831 83 35 0 257 339 219 301 2.84e-22 95.5
MS.gene81818.t1 AT4G02890 63.014 73 27 0 267 339 1 73 4.97e-22 95.1
MS.gene81818.t1 AT4G02890 57.831 83 35 0 257 339 67 149 2.84e-22 95.5
MS.gene81818.t1 AT4G02890 57.831 83 35 0 257 339 143 225 2.84e-22 95.5
MS.gene81818.t1 AT4G02890 57.831 83 35 0 257 339 219 301 2.84e-22 95.5
MS.gene81818.t1 AT4G02890 63.014 73 27 0 267 339 1 73 4.97e-22 95.1
MS.gene81818.t1 AT1G55060 61.644 73 28 0 267 339 77 149 4.80e-22 93.2
MS.gene81818.t1 AT1G55060 55.422 83 37 0 257 339 143 225 2.00e-20 89.0
MS.gene81818.t1 AT1G55060 58.904 73 30 0 267 339 1 73 1.23e-19 86.7
MS.gene81818.t1 AT1G65350 63.014 73 27 0 267 339 1 73 6.34e-22 94.7
MS.gene81818.t1 AT1G65350 57.831 83 35 0 257 339 142 224 6.41e-22 94.7
MS.gene81818.t1 AT1G65350 56.627 83 35 1 257 339 67 148 2.17e-19 87.8
MS.gene81818.t1 AT1G65350 46.392 97 38 1 257 339 218 314 1.61e-15 76.6
MS.gene81818.t1 AT5G20620 57.831 83 35 0 257 339 67 149 7.32e-22 95.5
MS.gene81818.t1 AT5G20620 57.831 83 35 0 257 339 143 225 7.32e-22 95.5
MS.gene81818.t1 AT5G20620 57.831 83 35 0 257 339 219 301 7.32e-22 95.5
MS.gene81818.t1 AT5G20620 57.831 83 35 0 257 339 295 377 7.32e-22 95.5
MS.gene81818.t1 AT5G20620 63.014 73 27 0 267 339 1 73 1.24e-21 95.1
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 67 149 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 143 225 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 219 301 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 295 377 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 63.014 73 27 0 267 339 1 73 1.29e-21 95.1
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 67 149 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 143 225 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 219 301 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 295 377 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 63.014 73 27 0 267 339 1 73 1.29e-21 95.1
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 67 149 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 143 225 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 219 301 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 295 377 7.69e-22 95.5
MS.gene81818.t1 AT4G05320 63.014 73 27 0 267 339 1 73 1.29e-21 95.1
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 67 149 1.35e-21 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 143 225 1.35e-21 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 219 301 1.35e-21 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 295 377 1.35e-21 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 371 453 1.35e-21 95.5
MS.gene81818.t1 AT4G05320 63.014 73 27 0 267 339 1 73 2.26e-21 95.1
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 67 149 1.35e-21 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 143 225 1.35e-21 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 219 301 1.35e-21 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 295 377 1.35e-21 95.5
MS.gene81818.t1 AT4G05320 57.831 83 35 0 257 339 371 453 1.35e-21 95.5
MS.gene81818.t1 AT4G05320 63.014 73 27 0 267 339 1 73 2.26e-21 95.1
MS.gene81818.t1 AT3G09790 55.422 83 37 0 257 339 69 151 1.25e-19 90.5
MS.gene81818.t1 AT3G09790 54.795 73 33 0 267 339 3 75 1.95e-16 80.9
MS.gene81818.t1 AT3G09790 56.164 73 32 0 267 339 552 624 1.40e-15 78.2
MS.gene81818.t1 AT3G09790 55.932 59 26 0 281 339 257 315 6.06e-12 67.0
MS.gene81818.t1 AT3G09790 46.809 94 41 3 253 339 143 234 1.31e-11 66.2
MS.gene81818.t1 AT3G09790 47.945 73 38 0 267 339 393 465 1.61e-11 65.9
MS.gene81818.t1 AT3G09790 55.422 83 37 0 257 339 69 151 1.25e-19 90.5
MS.gene81818.t1 AT3G09790 54.795 73 33 0 267 339 3 75 1.95e-16 80.9
MS.gene81818.t1 AT3G09790 56.164 73 32 0 267 339 552 624 1.40e-15 78.2
MS.gene81818.t1 AT3G09790 55.932 59 26 0 281 339 257 315 6.06e-12 67.0
MS.gene81818.t1 AT3G09790 46.809 94 41 3 253 339 143 234 1.31e-11 66.2
MS.gene81818.t1 AT3G09790 47.945 73 38 0 267 339 393 465 1.61e-11 65.9
MS.gene81818.t1 AT1G53930 46.465 99 41 1 253 339 60 158 5.59e-17 77.4
MS.gene81818.t1 AT3G58040 25.279 269 172 11 17 267 47 304 1.53e-16 79.3
MS.gene81818.t1 AT3G58040 25.279 269 172 11 17 267 47 304 1.53e-16 79.3
MS.gene81818.t1 AT1G66610 24.254 268 135 7 48 247 67 334 1.77e-16 80.1
MS.gene81818.t1 AT2G41980 26.378 254 160 11 34 267 55 301 3.32e-16 78.6
MS.gene81818.t1 AT4G27880 26.230 244 163 7 34 261 62 304 1.08e-15 77.4
MS.gene81818.t1 AT3G61790 25.820 244 164 7 34 261 61 303 5.66e-15 75.1
MS.gene81818.t1 AT1G66660 27.586 203 130 6 80 274 25 218 3.54e-14 71.2
MS.gene81818.t1 AT3G58040 27.922 154 93 5 17 163 47 189 5.17e-14 70.9
MS.gene81818.t1 AT1G53950 39.773 88 49 1 254 337 52 139 6.24e-14 68.6
MS.gene81818.t1 AT5G37900 27.586 174 112 4 84 247 50 219 3.01e-11 63.2

Find 70 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATTCCATTTGGTTATTT+TGG 0.086917 5.2:-64532534 MS.gene81818:CDS
GTCAAGTAATCTGGTCTTTC+AGG 0.185963 5.2:-64535401 MS.gene81818:intron
CAATAATAGTACTATGCTTC+TGG 0.233524 5.2:-64532715 MS.gene81818:CDS
CTTCTCTTGGATGTTGTAAT+TGG 0.240266 5.2:+64531982 None:intergenic
ATGCAGCACTCGAAATCTTT+TGG 0.242612 5.2:+64535439 None:intergenic
TGACAGTTGTTCACAAGTTC+AGG 0.295859 5.2:+64533080 None:intergenic
CCATGTTACTGTCCCGTTAA+AGG 0.322107 5.2:-64532903 MS.gene81818:CDS
TTTCGTTTGGGCATGGCATT+TGG 0.327374 5.2:+64532994 None:intergenic
GGAGGCGGAGGATGAGGTGG+AGG 0.331331 5.2:+64531954 None:intergenic
TAAGAGAGTCCCCGTGCTTA+TGG 0.345901 5.2:+64532835 None:intergenic
CAATATATCATAACTATAAC+TGG 0.346901 5.2:+64532647 None:intergenic
CAGTTATAGTTATGATATAT+TGG 0.353220 5.2:-64532646 MS.gene81818:CDS
AACAAAATCACAACCTTTAA+CGG 0.356146 5.2:+64532890 None:intergenic
GTCTGAACTCTCCACCTTCA+AGG 0.377884 5.2:+64532111 None:intergenic
GGTGGAGGGTTGCCTTCTCT+TGG 0.398143 5.2:+64531969 None:intergenic
AATGTCCAACGGTCTACTTC+AGG 0.411516 5.2:-64532579 MS.gene81818:CDS
GTTGCAATTCAGTGTGATAA+TGG 0.413314 5.2:-64533128 MS.gene81818:intron
TCAACCATCGTCAAGTAATC+TGG 0.414634 5.2:-64535410 MS.gene81818:CDS
AGGGGAGGCGGAGGATGAGG+TGG 0.449589 5.2:+64531951 None:intergenic
TGTTGTAATTGGCGAGGGTC+TGG 0.449822 5.2:+64531993 None:intergenic
AATAATAGTACTATGCTTCT+GGG 0.452747 5.2:-64532714 MS.gene81818:CDS
CCCCGTGCTTATGGTTGAAA+TGG 0.453443 5.2:+64532844 None:intergenic
GAGTTTCTCATGATTCCATT+TGG 0.455953 5.2:-64532543 MS.gene81818:CDS
TCTAGGGGAGGCGGAGGATG+AGG 0.456752 5.2:+64531948 None:intergenic
TCTGAACTCTCCACCTTCAA+GGG 0.459451 5.2:+64532112 None:intergenic
ATCAGACGTTGTTGGTGCAC+TGG 0.461760 5.2:+64532043 None:intergenic
ACAAAATCACAACCTTTAAC+GGG 0.462017 5.2:+64532891 None:intergenic
GGACATTCTTCGGAGAAGAA+TGG 0.465579 5.2:+64532595 None:intergenic
GAAGGAAATCATAACTTTGA+CGG 0.467465 5.2:+64535462 None:intergenic
GTAGACCGTTGGACATTCTT+CGG 0.472280 5.2:+64532585 None:intergenic
CTGAACTCTCCACCTTCAAG+GGG 0.482491 5.2:+64532113 None:intergenic
GTTCACAAGTTCAGGAAAGC+AGG 0.486473 5.2:+64533088 None:intergenic
GTGCTTCAAGAGGAAAATGA+TGG 0.498172 5.2:-64532753 MS.gene81818:CDS
GAAGAACCAAAATAACCAAA+TGG 0.502893 5.2:+64532528 None:intergenic
GCTGTCATCTAGTAGCTCAT+TGG 0.513698 5.2:+64532015 None:intergenic
GAGGCGGAGGATGAGGTGGA+GGG 0.516224 5.2:+64531955 None:intergenic
TTGGATGTTGTAATTGGCGA+GGG 0.519187 5.2:+64531988 None:intergenic
ATATTCATAGCACATGGTTG+TGG 0.520000 5.2:-64532145 MS.gene81818:CDS
ACCATTTCAACCATAAGCAC+GGG 0.528271 5.2:-64532845 MS.gene81818:CDS
TCAGACGTTGTTGGTGCACT+GGG 0.533496 5.2:+64532044 None:intergenic
GTGCTTATGGTTGAAATGGT+TGG 0.537800 5.2:+64532848 None:intergenic
TGGCAAACATCAGACGTTGT+TGG 0.553355 5.2:+64532035 None:intergenic
GAGAAGAATGGAACTTCAGA+CGG 0.556547 5.2:+64532607 None:intergenic
TGATCTACTTCTAGGGGAGG+CGG 0.556707 5.2:+64531939 None:intergenic
CTTGGATGTTGTAATTGGCG+AGG 0.562146 5.2:+64531987 None:intergenic
CAATAAGTCAAAGTGGAAAG+AGG 0.567412 5.2:-64532953 MS.gene81818:CDS
AGAATTCAACGAGACAATGA+AGG 0.570430 5.2:+64532791 None:intergenic
AACCATTTCAACCATAAGCA+CGG 0.578863 5.2:-64532846 MS.gene81818:CDS
ATAGTTATGATATATTGGCT+AGG 0.585445 5.2:-64532641 MS.gene81818:CDS
GAGATCGTTGATTCTGCAGA+AGG 0.590110 5.2:-64535502 MS.gene81818:CDS
CCTTTAACGGGACAGTAACA+TGG 0.593119 5.2:+64532903 None:intergenic
TGCTTCAAGAGGAAAATGAT+GGG 0.595045 5.2:-64532752 MS.gene81818:CDS
ATGCAAATTTCAAGCTCGAG+TGG 0.595202 5.2:+64532501 None:intergenic
GTTGGACAACACTTCTAATG+AGG 0.599282 5.2:+64532866 None:intergenic
TGAAGACATTGTGCTTCAAG+AGG 0.601484 5.2:-64532763 MS.gene81818:CDS
TCTACTTCTAGGGGAGGCGG+AGG 0.607892 5.2:+64531942 None:intergenic
CAATTACAACATCCAAGAGA+AGG 0.616839 5.2:-64531981 MS.gene81818:CDS
GTCTGATCTACTTCTAGGGG+AGG 0.617005 5.2:+64531936 None:intergenic
AAGAATCTTATCCTTCACAT+TGG 0.625557 5.2:+64532081 None:intergenic
AGAAGAATGGAACTTCAGAC+GGG 0.634366 5.2:+64532608 None:intergenic
GAGTTCCTGAAGTAGACCGT+TGG 0.656188 5.2:+64532574 None:intergenic
CTTCTCCGAAGAATGTCCAA+CGG 0.662024 5.2:-64532590 MS.gene81818:CDS
AAGACCAGATTACTTGACGA+TGG 0.664980 5.2:+64535406 None:intergenic
GAAGGATAAGATTCTTGACA+AGG 0.670445 5.2:-64532074 MS.gene81818:CDS
AGACACGATAGCCAATGTGA+AGG 0.673184 5.2:-64532092 MS.gene81818:CDS
ATGCAAATATTCATAGCACA+TGG 0.683285 5.2:-64532151 MS.gene81818:CDS
AGGGAGACAATAAGTCAAAG+TGG 0.684751 5.2:-64532960 MS.gene81818:CDS
CCATTTCAACCATAAGCACG+GGG 0.709635 5.2:-64532844 MS.gene81818:CDS
TGAACTCTCCACCTTCAAGG+GGG 0.721718 5.2:+64532114 None:intergenic
GAAGATAAGAGGTACCTTGG+GGG 0.731867 5.2:+64532476 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAAATTAAATAAGTAT+TGG + chr5.2:64534055-64534074 None:intergenic 10.0%
!! TGAAATAAATAAAAATATGT+GGG - chr5.2:64532984-64533003 MS.gene81818:CDS 10.0%
!! TGAAATAAATAAAAATATGT+GGG + chr5.2:64533003-64532984 None:intergenic 10.0%
!! TTGAAATAAATAAAAATATG+TGG - chr5.2:64532983-64533002 MS.gene81818:CDS 10.0%
!! TTGAAATAAATAAAAATATG+TGG + chr5.2:64533002-64532983 None:intergenic 10.0%
!!! AATACTTATTTAATTTACAT+TGG - chr5.2:64534054-64534073 MS.gene81818:intron 10.0%
!!! ATACTTATTTAATTTACATT+GGG - chr5.2:64534055-64534074 MS.gene81818:intron 10.0%
!!! TTTTATTTTATTCTACTTAA+TGG - chr5.2:64534296-64534315 MS.gene81818:intron 10.0%
!! ACGAAATTCTAAATATTTAT+AGG + chr5.2:64533275-64533294 None:intergenic 15.0%
!! CGAAATTCTAAATATTTATA+GGG + chr5.2:64533274-64533293 None:intergenic 15.0%
!! GAAATAAATAAAAATATGTG+GGG - chr5.2:64532985-64533004 MS.gene81818:CDS 15.0%
!! GAAATAAATAAAAATATGTG+GGG + chr5.2:64533004-64532985 None:intergenic 15.0%
!! TATAAAAGTTCAAAAATTGA+AGG + chr5.2:64534119-64534138 None:intergenic 15.0%
!!! ATTCTTTTTAGCATTTTTAA+AGG + chr5.2:64533499-64533518 None:intergenic 15.0%
!!! GTTTTTTCTTTTGTTTTTTT+GGG - chr5.2:64532170-64532189 MS.gene81818:intron 15.0%
!!! TTCATTATTGATTTATTTGT+TGG - chr5.2:64535290-64535309 MS.gene81818:intron 15.0%
!!! TTTTTTTGTAAGACTATAAT+TGG + chr5.2:64535054-64535073 None:intergenic 15.0%
!! AAAGAAAAAACCATAAATTG+AGG + chr5.2:64532161-64532180 None:intergenic 20.0%
!! AATTCAGTATATTTATGTGT+CGG - chr5.2:64533359-64533378 MS.gene81818:intron 20.0%
!! ACATAAATATACTGAATTAG+CGG + chr5.2:64533357-64533376 None:intergenic 20.0%
!! ATAAATATTGTTCTTTGCAT+TGG - chr5.2:64533042-64533061 MS.gene81818:CDS 20.0%
!! ATAAATATTGTTCTTTGCAT+TGG + chr5.2:64533061-64533042 None:intergenic 20.0%
!! ATGTTCTTAACTTACATTAT+AGG - chr5.2:64532444-64532463 MS.gene81818:intron 20.0%
!! ATGTTCTTAACTTACATTAT+AGG + chr5.2:64532463-64532444 None:intergenic 20.0%
!! ATGTTTCAAGAACATAAATA+TGG - chr5.2:64533121-64533140 MS.gene81818:intron 20.0%
!! ATTATTGACCATTAAAAAAG+AGG - chr5.2:64533230-64533249 MS.gene81818:intron 20.0%
!! CAATATATCATAACTATAAC+TGG + chr5.2:64534834-64534853 None:intergenic 20.0%
!! CAGTTATAGTTATGATATAT+TGG - chr5.2:64534832-64534851 MS.gene81818:intron 20.0%
!! TGTTCTTAACTTACATTATA+GGG - chr5.2:64532445-64532464 MS.gene81818:intron 20.0%
!! TGTTCTTAACTTACATTATA+GGG + chr5.2:64532464-64532445 None:intergenic 20.0%
!! TTATTGACCATTAAAAAAGA+GGG - chr5.2:64533231-64533250 MS.gene81818:intron 20.0%
!!! AAAAAGTGCAATTTTTTGTA+GGG + chr5.2:64533443-64533462 None:intergenic 20.0%
!!! ACTTTAAGAAGAAAAATTTG+AGG - chr5.2:64534187-64534206 MS.gene81818:intron 20.0%
!!! ATTTTTTTGTATGAACTAAG+AGG - chr5.2:64533542-64533561 MS.gene81818:intron 20.0%
!!! CTTTTTTTGTATGAACTAAA+CGG - chr5.2:64533737-64533756 MS.gene81818:intron 20.0%
!!! GGTTTTTTCTTTTGTTTTTT+TGG - chr5.2:64532169-64532188 MS.gene81818:intron 20.0%
!!! GTTTAGTTCATACAAAAAAA+GGG + chr5.2:64533738-64533757 None:intergenic 20.0%
!!! TAAAAAGTGCAATTTTTTGT+AGG + chr5.2:64533444-64533463 None:intergenic 20.0%
!!! TCTCTTATTGAATTTTCTTA+TGG - chr5.2:64534659-64534678 MS.gene81818:intron 20.0%
!!! TGTTTTCCATTTTTCAATTT+TGG - chr5.2:64535151-64535170 MS.gene81818:intron 20.0%
!!! TTTATGTTCTTGAAACATTT+TGG + chr5.2:64533119-64533138 None:intergenic 20.0%
!!! TTTTTTTGTATGAACTAAGA+GGG - chr5.2:64533543-64533562 MS.gene81818:intron 20.0%
! AAAGTCTATGTCAAAGTTTA+GGG + chr5.2:64534172-64534191 None:intergenic 25.0%
! AAATAAGAGATTTCTTTGCT+AGG + chr5.2:64534264-64534283 None:intergenic 25.0%
! AACAAAATCACAACCTTTAA+CGG + chr5.2:64534591-64534610 None:intergenic 25.0%
! AACCATAAATTGAGGTATAT+TGG + chr5.2:64532153-64532172 None:intergenic 25.0%
! AATAATAGTACTATGCTTCT+GGG - chr5.2:64534764-64534783 MS.gene81818:intron 25.0%
! AATGAAAAAGAGAAGATAAG+AGG + chr5.2:64535016-64535035 None:intergenic 25.0%
! AATGCTAAAAAGAATGTTAC+AGG - chr5.2:64533504-64533523 MS.gene81818:intron 25.0%
! AATTAGCCCAAGAAAAATTA+AGG - chr5.2:64533792-64533811 MS.gene81818:intron 25.0%
! ACCATAAATTGAGGTATATT+GGG + chr5.2:64532152-64532171 None:intergenic 25.0%
! ACTGATCCAAAATTGAAAAA+TGG + chr5.2:64535160-64535179 None:intergenic 25.0%
! AGGAATAGAAAAGGAAAAAA+AGG - chr5.2:64532888-64532907 MS.gene81818:CDS 25.0%
! ATGCTAAAAAGAATGTTACA+GGG - chr5.2:64533505-64533524 MS.gene81818:intron 25.0%
! ATGCTTCAAGAACATAAATA+TGG + chr5.2:64532347-64532366 None:intergenic 25.0%
! GGAATAGAAAAGGAAAAAAA+GGG - chr5.2:64532889-64532908 MS.gene81818:CDS 25.0%
! TAAAGTCTATGTCAAAGTTT+AGG + chr5.2:64534173-64534192 None:intergenic 25.0%
! TACAATATGAACTTCTTGTA+TGG - chr5.2:64534143-64534162 MS.gene81818:intron 25.0%
!! AAAACACTAACAATCCTTTT+TGG + chr5.2:64535137-64535156 None:intergenic 25.0%
!! AAATAGTTTGATAAGAGCAT+TGG + chr5.2:64532259-64532278 None:intergenic 25.0%
!! ATAGTTATGATATATTGGCT+AGG - chr5.2:64534837-64534856 MS.gene81818:intron 25.0%
!! ATGATTCCATTTGGTTATTT+TGG - chr5.2:64534944-64534963 MS.gene81818:intron 25.0%
!! CGTTTAGTTCATACAAAAAA+AGG + chr5.2:64533739-64533758 None:intergenic 25.0%
!!! CATAAATATGGTTTTAGCAT+TGG - chr5.2:64533133-64533152 MS.gene81818:intron 25.0%
!!! GTTTGATATTTTTTAGCAGT+GGG - chr5.2:64532105-64532124 MS.gene81818:CDS 25.0%
!!! TCTTCTCTTTTTCATTACTT+TGG - chr5.2:64535020-64535039 MS.gene81818:intron 25.0%
!!! TTTATGTTCTTGAAGCATTT+TGG - chr5.2:64532349-64532368 MS.gene81818:intron 25.0%
!!! TTTTTTGTATGAACTAAGAG+GGG - chr5.2:64533544-64533563 MS.gene81818:intron 25.0%
AAAGAGAAAACATGGGAAAT+GGG - chr5.2:64532934-64532953 MS.gene81818:CDS 30.0%
AACATTTATTACAGCACATC+AGG + chr5.2:64535240-64535259 None:intergenic 30.0%
AAGAATCTTATCCTTCACAT+TGG + chr5.2:64535400-64535419 None:intergenic 30.0%
AATAAAGCAAAGAGAGAGAA+AGG + chr5.2:64532592-64532611 None:intergenic 30.0%
ACAAAATCACAACCTTTAAC+GGG + chr5.2:64534590-64534609 None:intergenic 30.0%
ACATGAATACCTCTAATTTG+AGG - chr5.2:64533397-64533416 MS.gene81818:intron 30.0%
ACATTTATTACAGCACATCA+GGG + chr5.2:64535239-64535258 None:intergenic 30.0%
AGCACAAAAACACAACAATT+TGG - chr5.2:64532752-64532771 MS.gene81818:CDS 30.0%
ATAGAAAAGGAAAAAAAGGG+TGG - chr5.2:64532892-64532911 MS.gene81818:CDS 30.0%
ATGCAAATATTCATAGCACA+TGG - chr5.2:64535327-64535346 MS.gene81818:intron 30.0%
CAATAATAGTACTATGCTTC+TGG - chr5.2:64534763-64534782 MS.gene81818:intron 30.0%
GAAGAACCAAAATAACCAAA+TGG + chr5.2:64534953-64534972 None:intergenic 30.0%
GAAGGAAATCATAACTTTGA+CGG + chr5.2:64532019-64532038 None:intergenic 30.0%
GTATGAACTAAACGGAATTT+GGG - chr5.2:64533745-64533764 MS.gene81818:intron 30.0%
TAGAAAAGGAAAAAAAGGGT+GGG - chr5.2:64532893-64532912 MS.gene81818:CDS 30.0%
TCCCAATATACCTCAATTTA+TGG - chr5.2:64532148-64532167 MS.gene81818:CDS 30.0%
TCTTGTGTAAAAACAGTGTA+AGG - chr5.2:64533638-64533657 MS.gene81818:intron 30.0%
TGCATTGGAGTAAAAATGAA+AGG - chr5.2:64533057-64533076 MS.gene81818:CDS 30.0%
TGCATTGGAGTAAAAATGAA+AGG + chr5.2:64533076-64533057 None:intergenic 30.0%
TGCTCTTAAAGTGAATTACT+CGG + chr5.2:64532233-64532252 None:intergenic 30.0%
TGCTGTAATAAATGTTGCAA+GGG - chr5.2:64535244-64535263 MS.gene81818:intron 30.0%
TGTATGAACTAAACGGAATT+TGG - chr5.2:64533744-64533763 MS.gene81818:intron 30.0%
! ACCCATCCTTAATTTTTCTT+GGG + chr5.2:64533801-64533820 None:intergenic 30.0%
! ATGTTCTTGAAACATTTTGG+TGG + chr5.2:64533116-64533135 None:intergenic 30.0%
! TACCCATCCTTAATTTTTCT+TGG + chr5.2:64533802-64533821 None:intergenic 30.0%
!! AACAATTTGGTTCTATGCAT+TGG - chr5.2:64532765-64532784 MS.gene81818:CDS 30.0%
!! CAGTTTTTCAAATGCCAAAA+AGG - chr5.2:64535120-64535139 MS.gene81818:intron 30.0%
!! CATAAATATGGTTCTAGCAT+TGG + chr5.2:64532335-64532354 None:intergenic 30.0%
!! GACTCTTCTAAAGTGAATAA+AGG + chr5.2:64533890-64533909 None:intergenic 30.0%
!! TGTTCTTGAAACATTTTGGT+GGG + chr5.2:64533115-64533134 None:intergenic 30.0%
!!! CGTTTGATATTTTTTAGCAG+TGG - chr5.2:64532104-64532123 MS.gene81818:CDS 30.0%
!!! GAGGATGATTAGTTTTATGT+TGG - chr5.2:64534206-64534225 MS.gene81818:intron 30.0%
!!! TATCGAACCCTCTTTTTTAA+TGG + chr5.2:64533241-64533260 None:intergenic 30.0%
!!! TTACACTGTTTTTACACAAG+AGG + chr5.2:64533639-64533658 None:intergenic 30.0%
AAACGAAAAATATGGCTGCA+GGG - chr5.2:64534499-64534518 MS.gene81818:intron 35.0%
AACCATTTCAACCATAAGCA+CGG - chr5.2:64534632-64534651 MS.gene81818:intron 35.0%
AAGAGGGTTCGATAAGTAAA+TGG - chr5.2:64533247-64533266 MS.gene81818:intron 35.0%
ACTATTTACTATAGCCAACC+CGG - chr5.2:64532272-64532291 MS.gene81818:intron 35.0%
AGAAAAGGAAAAAAAGGGTG+GGG - chr5.2:64532894-64532913 MS.gene81818:CDS 35.0%
AGAATTCAACGAGACAATGA+AGG + chr5.2:64534690-64534709 None:intergenic 35.0%
AGAGAGAAGAGGAATAGAAA+AGG - chr5.2:64532879-64532898 MS.gene81818:CDS 35.0%
AGCCCAAGAAAAATTAAGGA+TGG - chr5.2:64533796-64533815 MS.gene81818:intron 35.0%
ATATTCATAGCACATGGTTG+TGG - chr5.2:64535333-64535352 MS.gene81818:intron 35.0%
CAATAAGTCAAAGTGGAAAG+AGG - chr5.2:64534525-64534544 MS.gene81818:intron 35.0%
CAATTACAACATCCAAGAGA+AGG - chr5.2:64535497-64535516 MS.gene81818:CDS 35.0%
CTTCTCTTGGATGTTGTAAT+TGG + chr5.2:64535499-64535518 None:intergenic 35.0%
GAAAGAGAAAACATGGGAAA+TGG - chr5.2:64532933-64532952 MS.gene81818:CDS 35.0%
GAAGGATAAGATTCTTGACA+AGG - chr5.2:64535404-64535423 MS.gene81818:CDS 35.0%
GAGTTTCTCATGATTCCATT+TGG - chr5.2:64534935-64534954 MS.gene81818:intron 35.0%
GCCCAAGAAAAATTAAGGAT+GGG - chr5.2:64533797-64533816 MS.gene81818:intron 35.0%
GCTGTAATAAATGTTGCAAG+GGG - chr5.2:64535245-64535264 MS.gene81818:intron 35.0%
GGAGATAGTGATTATGTTCA+AGG - chr5.2:64533982-64534001 MS.gene81818:intron 35.0%
GGATGTTCTTAATACACATG+TGG + chr5.2:64533097-64533078 None:intergenic 35.0%
GTGCTGTAATAAATGTTGCA+AGG - chr5.2:64535243-64535262 MS.gene81818:intron 35.0%
GTTGCAATTCAGTGTGATAA+TGG - chr5.2:64534350-64534369 MS.gene81818:intron 35.0%
TAATACACATGTGACACCTT+TGG - chr5.2:64533087-64533106 MS.gene81818:CDS 35.0%
TCTACCAATGAAGCATGATA+AGG - chr5.2:64533304-64533323 MS.gene81818:intron 35.0%
TCTTGGGCTAATTAAGCAAA+TGG + chr5.2:64533785-64533804 None:intergenic 35.0%
TGCTTCAAGAGGAAAATGAT+GGG - chr5.2:64534726-64534745 MS.gene81818:intron 35.0%
TGTAGACAGCAGAAAAGAAT+GGG - chr5.2:64533960-64533979 MS.gene81818:intron 35.0%
TTATCATGCTTCATTGGTAG+AGG + chr5.2:64533305-64533324 None:intergenic 35.0%
TTGTAGACAGCAGAAAAGAA+TGG - chr5.2:64533959-64533978 MS.gene81818:intron 35.0%
! TGCAGCCATATTTTTCGTTT+GGG + chr5.2:64534499-64534518 None:intergenic 35.0%
! TTCTTTTCTGCTGTCTACAA+AGG + chr5.2:64533959-64533978 None:intergenic 35.0%
!! AATTTGGTTCTATGCATTGG+AGG - chr5.2:64532768-64532787 MS.gene81818:CDS 35.0%
!! ATGTTCTTGAAGCATTTTGG+TGG - chr5.2:64532352-64532371 MS.gene81818:intron 35.0%
!! GTTCTTGAAACATTTTGGTG+GGG + chr5.2:64533114-64533133 None:intergenic 35.0%
!! TAAATAAGTATTGGCCTCCA+AGG + chr5.2:64534046-64534065 None:intergenic 35.0%
!! TGTTCTTGAAGCATTTTGGT+GGG - chr5.2:64532353-64532372 MS.gene81818:intron 35.0%
!! TTTGCAACGTTTTGAGCTAA+CGG + chr5.2:64534438-64534457 None:intergenic 35.0%
!!! AGGGGTTTTTGTTTTCTTTC+TGG - chr5.2:64535263-64535282 MS.gene81818:intron 35.0%
!!! GGTTTTTGTTTTCTTTCTGG+TGG - chr5.2:64535266-64535285 MS.gene81818:intron 35.0%
AAAATATGTGGGGCCAATTG+TGG - chr5.2:64532995-64533014 MS.gene81818:CDS 40.0%
AAAATATGTGGGGCCAATTG+TGG + chr5.2:64533014-64532995 None:intergenic 40.0%
AAAGCAAAGAGAGAGAAAGG+AGG + chr5.2:64532589-64532608 None:intergenic 40.0%
AAAGCAAAGAGAGAGAGAAG+AGG - chr5.2:64532868-64532887 MS.gene81818:CDS 40.0%
AAATATGTGGGGCCAATTGT+GGG - chr5.2:64532996-64533015 MS.gene81818:CDS 40.0%
AAATATGTGGGGCCAATTGT+GGG + chr5.2:64533015-64532996 None:intergenic 40.0%
AAGACCAGATTACTTGACGA+TGG + chr5.2:64532075-64532094 None:intergenic 40.0%
ACATTATAGGGTCCCACAAT+TGG - chr5.2:64532457-64532476 MS.gene81818:intron 40.0%
ACATTATAGGGTCCCACAAT+TGG + chr5.2:64532476-64532457 None:intergenic 40.0%
ACCATTTCAACCATAAGCAC+GGG - chr5.2:64534633-64534652 MS.gene81818:intron 40.0%
AGAAGAATGGAACTTCAGAC+GGG + chr5.2:64534873-64534892 None:intergenic 40.0%
AGAGAGAAAGGAGGAAAAGA+AGG + chr5.2:64532580-64532599 None:intergenic 40.0%
AGGGAGACAATAAGTCAAAG+TGG - chr5.2:64534518-64534537 MS.gene81818:intron 40.0%
ATGCAAATTTCAAGCTCGAG+TGG + chr5.2:64534980-64534999 None:intergenic 40.0%
ATGCTTAGATGAGTAAGCCT+TGG - chr5.2:64534026-64534045 MS.gene81818:intron 40.0%
CAAACGAAAAATATGGCTGC+AGG - chr5.2:64534498-64534517 MS.gene81818:intron 40.0%
CATACAAAAAAAGGGCAACC+CGG + chr5.2:64533730-64533749 None:intergenic 40.0%
CCATGCCCAAACGAAAAATA+TGG - chr5.2:64534491-64534510 MS.gene81818:intron 40.0%
CTATTTACTATAGCCAACCC+GGG - chr5.2:64532273-64532292 MS.gene81818:intron 40.0%
GAGAAGAATGGAACTTCAGA+CGG + chr5.2:64534874-64534893 None:intergenic 40.0%
GAGAGAAAGGAGGAAAAGAA+GGG + chr5.2:64532579-64532598 None:intergenic 40.0%
GCTAGGGAAAGAGAAAACAT+GGG + chr5.2:64532541-64532560 None:intergenic 40.0%
GTAGACAGCAGAAAAGAATG+GGG - chr5.2:64533961-64533980 MS.gene81818:intron 40.0%
GTGCTTATGGTTGAAATGGT+TGG + chr5.2:64534633-64534652 None:intergenic 40.0%
GTGCTTCAAGAGGAAAATGA+TGG - chr5.2:64534725-64534744 MS.gene81818:intron 40.0%
GTGTCCTTATCATGCTTCAT+TGG + chr5.2:64533311-64533330 None:intergenic 40.0%
GTTGGACAACACTTCTAATG+AGG + chr5.2:64534615-64534634 None:intergenic 40.0%
TAATACACATGTGGCACCTT+TGG + chr5.2:64532381-64532400 None:intergenic 40.0%
TCAACCATCGTCAAGTAATC+TGG - chr5.2:64532068-64532087 MS.gene81818:CDS 40.0%
TGAAATTTGCATAACCCCCA+AGG - chr5.2:64534988-64535007 MS.gene81818:intron 40.0%
TGAAGACATTGTGCTTCAAG+AGG - chr5.2:64534715-64534734 MS.gene81818:intron 40.0%
TGACAGTTGTTCACAAGTTC+AGG + chr5.2:64534401-64534420 None:intergenic 40.0%
TTGGATGTTGTAATTGGCGA+GGG + chr5.2:64535493-64535512 None:intergenic 40.0%
! ATGCAGCACTCGAAATCTTT+TGG + chr5.2:64532042-64532061 None:intergenic 40.0%
! CCATATTTTTCGTTTGGGCA+TGG + chr5.2:64534494-64534513 None:intergenic 40.0%
! CTGCAGCCATATTTTTCGTT+TGG + chr5.2:64534500-64534519 None:intergenic 40.0%
! GATTTATTTGTTGGCGACTG+CGG - chr5.2:64535299-64535318 MS.gene81818:intron 40.0%
! GTATTCATGTGTCACTGACA+CGG + chr5.2:64533387-64533406 None:intergenic 40.0%
! GTCAAGTAATCTGGTCTTTC+AGG - chr5.2:64532077-64532096 MS.gene81818:CDS 40.0%
! TGCAGCACTCGAAATCTTTT+GGG + chr5.2:64532041-64532060 None:intergenic 40.0%
!! AGAAGATAAGAGGTACCTTG+GGG + chr5.2:64535006-64535025 None:intergenic 40.0%
!! AGAGAAGATAAGAGGTACCT+TGG + chr5.2:64535008-64535027 None:intergenic 40.0%
!! GAGAAGATAAGAGGTACCTT+GGG + chr5.2:64535007-64535026 None:intergenic 40.0%
!! GTTCTTGAAGCATTTTGGTG+GGG - chr5.2:64532354-64532373 MS.gene81818:intron 40.0%
!! TTGCAACGTTTTGAGCTAAC+GGG + chr5.2:64534437-64534456 None:intergenic 40.0%
AAAGGAGGAAAAGAAGGGTG+GGG + chr5.2:64532574-64532593 None:intergenic 45.0%
AATGTCCAACGGTCTACTTC+AGG - chr5.2:64534899-64534918 MS.gene81818:intron 45.0%
ACAACTTTACCAGTTGCCCA+AGG + chr5.2:64533573-64533592 None:intergenic 45.0%
ACGGACACTCCTCAAATTAG+AGG + chr5.2:64533409-64533428 None:intergenic 45.0%
AGAAAGGAGGAAAAGAAGGG+TGG + chr5.2:64532576-64532595 None:intergenic 45.0%
AGACACGATAGCCAATGTGA+AGG - chr5.2:64535386-64535405 MS.gene81818:intron 45.0%
AGCACAAGAACACAGCAGTT+TGG + chr5.2:64532705-64532724 None:intergenic 45.0%
CCATGTTACTGTCCCGTTAA+AGG - chr5.2:64534575-64534594 MS.gene81818:intron 45.0%
CCATTTCAACCATAAGCACG+GGG - chr5.2:64534634-64534653 MS.gene81818:intron 45.0%
CCTTTAACGGGACAGTAACA+TGG + chr5.2:64534578-64534597 None:intergenic 45.0%
CGCTAGGGAAAGAGAAAACA+TGG + chr5.2:64532542-64532561 None:intergenic 45.0%
CGTACAATACACCGAATGGT+GGG - chr5.2:64533664-64533683 MS.gene81818:intron 45.0%
CTTAGATGAGTAAGCCTTGG+AGG - chr5.2:64534029-64534048 MS.gene81818:intron 45.0%
CTTCTCCGAAGAATGTCCAA+CGG - chr5.2:64534888-64534907 MS.gene81818:intron 45.0%
CTTGGATGTTGTAATTGGCG+AGG + chr5.2:64535494-64535513 None:intergenic 45.0%
GAAAGGAGGAAAAGAAGGGT+GGG + chr5.2:64532575-64532594 None:intergenic 45.0%
GAACTAAGAGGGGTAACCTT+GGG - chr5.2:64533554-64533573 MS.gene81818:intron 45.0%
GCTGGGGAAAGAGAAAACAT+GGG - chr5.2:64532927-64532946 MS.gene81818:CDS 45.0%
GCTGTCATCTAGTAGCTCAT+TGG + chr5.2:64535466-64535485 None:intergenic 45.0%
GGACATTCTTCGGAGAAGAA+TGG + chr5.2:64534886-64534905 None:intergenic 45.0%
GTAGACCGTTGGACATTCTT+CGG + chr5.2:64534896-64534915 None:intergenic 45.0%
GTTCACAAGTTCAGGAAAGC+AGG + chr5.2:64534393-64534412 None:intergenic 45.0%
GTTGTTGTCATGTGACTGAC+AGG - chr5.2:64533588-64533607 MS.gene81818:intron 45.0%
TATAGCCAACCCCACTTAGT+GGG + chr5.2:64533192-64533211 None:intergenic 45.0%
TCTGAACTCTCCACCTTCAA+GGG + chr5.2:64535369-64535388 None:intergenic 45.0%
TGAACTAAGAGGGGTAACCT+TGG - chr5.2:64533553-64533572 MS.gene81818:intron 45.0%
TGGCAAACATCAGACGTTGT+TGG + chr5.2:64535446-64535465 None:intergenic 45.0%
TTTCGTTTGGGCATGGCATT+TGG + chr5.2:64534487-64534506 None:intergenic 45.0%
! AAAAAAAGGGTGGGGAGTGT+GGG - chr5.2:64532902-64532921 MS.gene81818:CDS 45.0%
! AAAGGCACACAAGACAAGGA+GGG + chr5.2:64533941-64533960 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr5.2:64533180-64533199 MS.gene81818:intron 45.0%
! ACAACAACCAAGCCTTATCC+CGG + chr5.2:64533190-64533171 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr5.2:64533179-64533198 MS.gene81818:intron 45.0%
! CTACAAAGGCACACAAGACA+AGG + chr5.2:64533945-64533964 None:intergenic 45.0%
! TGGTTCTATGCATTGGAGGA+GGG - chr5.2:64532772-64532791 MS.gene81818:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr5.2:64533628-64533647 None:intergenic 45.0%
!! AACATTTTGGTGGGGTCCAA+AGG + chr5.2:64533106-64533125 None:intergenic 45.0%
!! AGCAGTTTGGTTCTATGCAC+TGG + chr5.2:64532692-64532711 None:intergenic 45.0%
!! AGTTTGGTTCTATGCACTGG+AGG + chr5.2:64532689-64532708 None:intergenic 45.0%
!! GAAGATAAGAGGTACCTTGG+GGG + chr5.2:64535005-64535024 None:intergenic 45.0%
!! GAGATCGTTGATTCTGCAGA+AGG - chr5.2:64531976-64531995 MS.gene81818:CDS 45.0%
!! GCACTCGAAATCTTTTGGGA+AGG + chr5.2:64532037-64532056 None:intergenic 45.0%
!! TTGGTTCTATGCATTGGAGG+AGG - chr5.2:64532771-64532790 MS.gene81818:CDS 45.0%
!!! GGGTGAACAATGTCGCTTTT+TGG + chr5.2:64533921-64533940 None:intergenic 45.0%
AAAGATGACCCCCTTGAAGG+TGG - chr5.2:64535356-64535375 MS.gene81818:intron 50.0%
ACAACACGACACTGACACGT+TGG - chr5.2:64533329-64533348 MS.gene81818:intron 50.0%
ACTATAGCCAACCCGGGATA+AGG - chr5.2:64532279-64532298 MS.gene81818:intron 50.0%
ATCAGACGTTGTTGGTGCAC+TGG + chr5.2:64535438-64535457 None:intergenic 50.0%
CAACCCCACTTAGTGGGATA+AGG + chr5.2:64533186-64533205 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr5.2:64533181-64533200 None:intergenic 50.0%
CCCCGTGCTTATGGTTGAAA+TGG + chr5.2:64534637-64534656 None:intergenic 50.0%
CGCTGGGGAAAGAGAAAACA+TGG - chr5.2:64532926-64532945 MS.gene81818:CDS 50.0%
CTATAGCCAACCCCACTTAG+TGG + chr5.2:64533193-64533212 None:intergenic 50.0%
CTGAACTCTCCACCTTCAAG+GGG + chr5.2:64535368-64535387 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+TGG - chr5.2:64533184-64533203 MS.gene81818:intron 50.0%
GAAAAAAAGGGTGGGGAGTG+TGG - chr5.2:64532901-64532920 MS.gene81818:CDS 50.0%
GAGTTCCTGAAGTAGACCGT+TGG + chr5.2:64534907-64534926 None:intergenic 50.0%
GCGTACAATACACCGAATGG+TGG - chr5.2:64533663-64533682 MS.gene81818:intron 50.0%
GCTGCGTACAATACACCGAA+TGG - chr5.2:64533660-64533679 MS.gene81818:intron 50.0%
GTCATGTGACTGACAGGTCA+CGG - chr5.2:64533594-64533613 MS.gene81818:intron 50.0%
GTCTGAACTCTCCACCTTCA+AGG + chr5.2:64535370-64535389 None:intergenic 50.0%
TAAGAGAGTCCCCGTGCTTA+TGG + chr5.2:64534646-64534665 None:intergenic 50.0%
TCAGACGTTGTTGGTGCACT+GGG + chr5.2:64535437-64535456 None:intergenic 50.0%
TCATGTGACTGACAGGTCAC+GGG - chr5.2:64533595-64533614 MS.gene81818:intron 50.0%
TGAACTCTCCACCTTCAAGG+GGG + chr5.2:64535367-64535386 None:intergenic 50.0%
TGGAAAGATGACCCCCTTGA+AGG - chr5.2:64535353-64535372 MS.gene81818:intron 50.0%
TGTTGTAATTGGCGAGGGTC+TGG + chr5.2:64535488-64535507 None:intergenic 50.0%
TTGTAGGGACCTGTGAAGCA+CGG + chr5.2:64533428-64533447 None:intergenic 50.0%
! AAAAGAAGGGTGGGGAGTGT+GGG + chr5.2:64532566-64532585 None:intergenic 50.0%
! CAAAGGCACACAAGACAAGG+AGG + chr5.2:64533942-64533961 None:intergenic 50.0%
! CAACAACCAAGCCTTATCCC+GGG + chr5.2:64533191-64533172 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr5.2:64533178-64533197 MS.gene81818:intron 50.0%
! TGGTTCTATGCACTGGAGGA+GGG + chr5.2:64532685-64532704 None:intergenic 50.0%
!! AGCATTTTGGTGGGGTCCAA+AGG - chr5.2:64532362-64532381 MS.gene81818:intron 50.0%
!! TTGGTTCTATGCACTGGAGG+AGG + chr5.2:64532686-64532705 None:intergenic 50.0%
AGGTTGGAGAACGGTTCCTG+TGG - chr5.2:64532808-64532827 MS.gene81818:CDS 55.0%
AGGTTGGAGAACGGTTCCTG+TGG + chr5.2:64532827-64532808 None:intergenic 55.0%
GAAAAGAAGGGTGGGGAGTG+TGG + chr5.2:64532567-64532586 None:intergenic 55.0%
GGTTGGAGAACGGTTCCTGT+GGG - chr5.2:64532809-64532828 MS.gene81818:CDS 55.0%
GGTTGGAGAACGGTTCCTGT+GGG + chr5.2:64532828-64532809 None:intergenic 55.0%
GTTGGAGAACGGTTCCTGTG+GGG - chr5.2:64532810-64532829 MS.gene81818:CDS 55.0%
GTTGGAGAACGGTTCCTGTG+GGG + chr5.2:64532829-64532810 None:intergenic 55.0%
TTGGAGAACGGTTCCTGTGG+GGG - chr5.2:64532811-64532830 MS.gene81818:CDS 55.0%
TTGGAGAACGGTTCCTGTGG+GGG + chr5.2:64532830-64532811 None:intergenic 55.0%
! AACCAAGCCTTATCCCGGGT+TGG + chr5.2:64532289-64532308 None:intergenic 55.0%
! CTGGAGGACAGGTTGGAGAA+CGG - chr5.2:64532799-64532818 MS.gene81818:CDS 55.0%
! CTGGAGGACAGGTTGGAGAA+CGG + chr5.2:64532818-64532799 None:intergenic 55.0%
ACCAAAGCTCCCGCATACGC+AGG + chr5.2:64533704-64533723 None:intergenic 60.0%
AGCCAACCCGGGATAAGGCT+TGG - chr5.2:64532284-64532303 MS.gene81818:intron 60.0%
ATTGGAGGAGGGTGAGCTGG+AGG - chr5.2:64532783-64532802 MS.gene81818:CDS 60.0%
CAGGTCACGGGTTCAAGTCC+TGG - chr5.2:64533607-64533626 MS.gene81818:intron 60.0%
CCAAAGCTCCCGCATACGCA+GGG + chr5.2:64533703-64533722 None:intergenic 60.0%
GAGGGGTAACCTTGGGCAAC+TGG - chr5.2:64533561-64533580 MS.gene81818:intron 60.0%
GCAAGAACGTGTTCCCCCAC+AGG - chr5.2:64532630-64532649 MS.gene81818:CDS 60.0%
GCAAGAACGTGTTCCCCCAC+AGG + chr5.2:64532649-64532630 None:intergenic 60.0%
GGTGGAGGGTTGCCTTCTCT+TGG + chr5.2:64535512-64535531 None:intergenic 60.0%
GTGGGGGAACACGTTCTTGC+AGG - chr5.2:64532827-64532846 MS.gene81818:CDS 60.0%
GTGGGGGAACACGTTCTTGC+AGG + chr5.2:64532846-64532827 None:intergenic 60.0%
TGCATTGGAGGAGGGTGAGC+TGG - chr5.2:64532780-64532799 MS.gene81818:CDS 60.0%
! ATGCGGGAGCTTTGGTGCAC+CGG - chr5.2:64533708-64533727 MS.gene81818:intron 60.0%
!! GAGGAGTGTCCGTGCTTCAC+AGG - chr5.2:64533416-64533435 MS.gene81818:intron 60.0%
ACTGGAGGAGGGTGAGCTGG+AGG + chr5.2:64532674-64532693 None:intergenic 65.0%
AGGAGGGTGAGCTGGAGGAC+AGG - chr5.2:64532788-64532807 MS.gene81818:CDS 65.0%
AGGAGGGTGAGCTGGAGGAC+AGG + chr5.2:64532807-64532788 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr5.2:64533691-64533710 None:intergenic 65.0%
CCCTGCGTATGCGGGAGCTT+TGG - chr5.2:64533700-64533719 MS.gene81818:intron 65.0%
CGGGAAGGGGTCCCACCATT+CGG + chr5.2:64533678-64533697 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr5.2:64533691-64533710 MS.gene81818:intron 65.0%
GAGGCGGAGGATGAGGTGGA+GGG + chr5.2:64535526-64535545 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr5.2:64533692-64533711 None:intergenic 65.0%
GGGTGAGCTGGAGGACAGGT+TGG - chr5.2:64532792-64532811 MS.gene81818:CDS 65.0%
GGGTGAGCTGGAGGACAGGT+TGG + chr5.2:64532811-64532792 None:intergenic 65.0%
TGCACTGGAGGAGGGTGAGC+TGG + chr5.2:64532677-64532696 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr5.2:64533692-64533711 MS.gene81818:intron 65.0%
! CGAATGGTGGGACCCCTTCC+CGG - chr5.2:64533676-64533695 MS.gene81818:intron 65.0%
! GTGGGGAGTGTGGGACGCTA+GGG + chr5.2:64532557-64532576 None:intergenic 65.0%
! TGCGGGAGCTTTGGTGCACC+GGG - chr5.2:64533709-64533728 MS.gene81818:intron 65.0%
AGGGGAGGCGGAGGATGAGG+TGG + chr5.2:64535530-64535549 None:intergenic 70.0%
CGCATACGCAGGGTCCGGGA+AGG + chr5.2:64533693-64533712 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr5.2:64533697-64533716 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + chr5.2:64533698-64533717 None:intergenic 70.0%
GGAGGCGGAGGATGAGGTGG+AGG + chr5.2:64535527-64535546 None:intergenic 70.0%
! GGTGGGGAGTGTGGGACGCT+AGG + chr5.2:64532929-64532910 None:intergenic 70.0%
! GGTGGGGAGTGTGGGACGCT+GGG - chr5.2:64532910-64532929 MS.gene81818:CDS 70.0%
! GTGGGGAGTGTGGGACGCTG+GGG - chr5.2:64532911-64532930 MS.gene81818:CDS 70.0%
! GGGTGGGGAGTGTGGGACGC+TGG - chr5.2:64532909-64532928 MS.gene81818:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 64531949 64535551 64531949 ID=MS.gene81818
chr5.2 mRNA 64531949 64535551 64531949 ID=MS.gene81818.t1;Parent=MS.gene81818
chr5.2 exon 64535402 64535551 64535402 ID=MS.gene81818.t1.exon1;Parent=MS.gene81818.t1
chr5.2 CDS 64535402 64535551 64535402 ID=cds.MS.gene81818.t1;Parent=MS.gene81818.t1
chr5.2 exon 64532491 64533138 64532491 ID=MS.gene81818.t1.exon2;Parent=MS.gene81818.t1
chr5.2 CDS 64532491 64533138 64532491 ID=cds.MS.gene81818.t1;Parent=MS.gene81818.t1
chr5.2 exon 64531949 64532173 64531949 ID=MS.gene81818.t1.exon3;Parent=MS.gene81818.t1
chr5.2 CDS 64531949 64532173 64531949 ID=cds.MS.gene81818.t1;Parent=MS.gene81818.t1
Gene Sequence

>MS.gene81818

ATGGAGACATGCAACAAAGAAAATAAAGAGATCGTTGATTCTGCAGAAGGTATTAGTAAGAATAGTTCCGTCAAAGTTATGATTTCCTTCCCAAAAGATTTCGAGTGCTGCATTTGTCTTCAACCATCGTCAAGTAATCTGGTCTTTCAGGTATGCGTTTGATATTTTTTAGCAGTGGGAAATGAAGCTCATATGAAAATCCCAATATACCTCAATTTATGGTTTTTTCTTTTGTTTTTTTGGGCTTTTTTTGTCATTTCATCATAAAATATTGAATGACACCGAGTAATTCACTTTAAGAGCATCTCCAATGCTCTTATCAAACTATTTACTATAGCCAACCCGGGATAAGGCTTGGTTGTTGTTGTTCTATAAGAGCATCTCCAATGCTAGAACCATATTTATGTTCTTGAAGCATTTTGGTGGGGTCCAAAGGTGCCACATGTGTATTAAGAACATCCTTTCATTTTTACTCCAATGCAAAGAACAATATTTATGTTCTTAACTTACATTATAGGGTCCCACAATTGGCCCCACATATTTTTATTTATTTCAATACTTATTATTTTTCAAAAACTTAAACTCATTTCCCATGTTTTCTCTTTCCCTAGCGTCCCACACTCCCCACCCTTCTTTTCCTCCTTTCTCTCTCTTTGCTTTATTTTGTCTGACACAAAACCTGCAAGAACGTGTTCCCCCACAGGAACCGTTCTCCAACCTGTCCTCCAGCTCACCCTCCTCCAGTGCATAGAACCAAACTGCTGTGTTCTTGTGCTTCGAGAACTTCTACACACTGTTCTCTAAGCACAAAAACACAACAATTTGGTTCTATGCATTGGAGGAGGGTGAGCTGGAGGACAGGTTGGAGAACGGTTCCTGTGGGGGAACACGTTCTTGCAGGTTCTGTGTCAGACAAAAGAAAGCAAAGAGAGAGAGAAGAGGAATAGAAAAGGAAAAAAAGGGTGGGGAGTGTGGGACGCTGGGGAAAGAGAAAACATGGGAAATGGGTTTAAGTTTTTGAAAAATAATAAGTATTGAAATAAATAAAAATATGTGGGGCCAATTGTGGGACCCTATAATGTAAGTTAAGAACATAAATATTGTTCTTTGCATTGGAGTAAAAATGAAAGGATGTTCTTAATACACATGTGACACCTTTGGACCCCACCAAAATGTTTCAAGAACATAAATATGGTTTTAGCATTGGAGATGCTCTTATAGAACAACAACCAAGCCTTATCCCACTAAGTGGGGTTGGCTATAGTAAATAGTTTGATAAATATTATTGACCATTAAAAAAGAGGGTTCGATAAGTAAATGGTCCCTATAAATATTTAGAATTTCGTTTTTAGTCCTCTACCAATGAAGCATGATAAGGACACAACACGACACTGACACGTTGGCACCGCTAATTCAGTATATTTATGTGTCGGTACCGTGTCAGTGACACATGAATACCTCTAATTTGAGGAGTGTCCGTGCTTCACAGGTCCCTACAAAAAATTGCACTTTTTAGTGTTGTAAAATTTTTAATCAACATTTTTAGTCCTTTAAAAATGCTAAAAAGAATGTTACAGGGTCTAAAAAGTTATGATTTTTTTGTATGAACTAAGAGGGGTAACCTTGGGCAACTGGTAAAGTTGTTGTCATGTGACTGACAGGTCACGGGTTCAAGTCCTGGAAACAGCCTCTTGTGTAAAAACAGTGTAAGGCTGCGTACAATACACCGAATGGTGGGACCCCTTCCCGGACCCTGCGTATGCGGGAGCTTTGGTGCACCGGGTTGCCCTTTTTTTGTATGAACTAAACGGAATTTGGGATATTTAATAGAGACCATTTGCTTAATTAGCCCAAGAAAAATTAAGGATGGGTATTAGAGATACATCATAACAACAAGAAGTTTGTTAAAATATCAGTAACTTGATTTTCTCACTTTATCCTTTATTCACTTTAGAAGAGTCAAATTCAGCCAAAAAGCGACATTGTTCACCCTCCTTGTCTTGTGTGCCTTTGTAGACAGCAGAAAAGAATGGGGAGATAGTGATTATGTTCAAGGAATCAATTTTGTTTATTATAAATGCTTAGATGAGTAAGCCTTGGAGGCCAATACTTATTTAATTTACATTGGGTTTGAATATTAATTATGAATGTCTTTAATTTTGTATAACCTTCAATTTTTGAACTTTTATATGTGTACAATATGAACTTCTTGTATGGTTTCCCTAAACTTTGACATAGACTTTAAGAAGAAAAATTTGAGGATGATTAGTTTTATGTTGGTTATACTTTTGATTGCACAACATGCTAACAAACCTAGCAAAGAAATCTCTTATTTTATTTTATTTTATTTTATTTTATTCTACTTAATGGTTCAAAGTCTAATTTGATGACTATCTTTTATGTTGCAATTCAGTGTGATAATGGTCATATTGTTTGCTCTACCTGCTTTCCTGAACTTGTGAACAACTGTCACAAGTGCTCGTTGCCCGTTAGCTCAAAACGTTGCAAAGTCATTGAGAATATATCGCAATCTATCCAAATGCCATGCCCAAACGAAAAATATGGCTGCAGGGAGACAATAAGTCAAAGTGGAAAGAGGAAACATGAAGAAGAATGCATCTATGTGCCATGTTACTGTCCCGTTAAAGGTTGTGATTTTGTTGCCTCATTAGAAGTGTTGTCCAACCATTTCAACCATAAGCACGGGGACTCTCTTATTGAATTTTCTTATGGTCACTCCTTCATTGTCTCGTTGAATTCTAATGATGAAGACATTGTGCTTCAAGAGGAAAATGATGGGAAACTATTTACTCTCAATAATAGTACTATGCTTCTGGGAAATGCAGTCAATATTAGCTGCATTGATGTCAACTCTTCTGAAGCCAGTTATAGTTATGATATATTGGCTAGGTCTAAGATGTCCCGTCTGAAGTTCCATTCTTCTCCGAAGAATGTCCAACGGTCTACTTCAGGAACTCTTTCATCAGAGTTTCTCATGATTCCATTTGGTTATTTTGGTTCTTCTAAACCACTCGAGCTTGAAATTTGCATAACCCCCAAGGTACCTCTTATCTTCTCTTTTTCATTACTTTGGTTGTTTTTCCAATTATAGTCTTACAAAAAAAAAATTATCTTTCGAATATATACTCAAGCATTTTATCTCAAATTCATCAGTTTTTCAAATGCCAAAAAGGATTGTTAGTGTTTTCCATTTTTCAATTTTGGATCAGTTCTTGAAATATTAAAATTAAATTTTCTTTTATTCGTTTGATCATGATATTTGTTTGCCCTGATGTGCTGTAATAAATGTTGCAAGGGGTTTTTGTTTTCTTTCTGGTGGTTTCATTATTGATTTATTTGTTGGCGACTGCGGTGCAGATGCAAATATTCATAGCACATGGTTGTGGAAAGATGACCCCCTTGAAGGTGGAGAGTTCAGACACGATAGCCAATGTGAAGGATAAGATTCTTGACAAGGAAGCGATCCCAGTGCACCAACAACGTCTGATGTTTGCCAATGAGCTACTAGATGACAGCCAGACCCTCGCCAATTACAACATCCAAGAGAAGGCAACCCTCCACCTCATCCTCCGCCTCCCCTAG
Protein sequence

>MS.gene81818.t1

METCNKENKEIVDSAEGISKNSSVKVMISFPKDFECCICLQPSSSNLVFQCDNGHIVCSTCFPELVNNCHKCSLPVSSKRCKVIENISQSIQMPCPNEKYGCRETISQSGKRKHEEECIYVPCYCPVKGCDFVASLEVLSNHFNHKHGDSLIEFSYGHSFIVSLNSNDEDIVLQEENDGKLFTLNNSTMLLGNAVNISCIDVNSSEASYSYDILARSKMSRLKFHSSPKNVQRSTSGTLSSEFLMIPFGYFGSSKPLELEICITPKMQIFIAHGCGKMTPLKVESSDTIANVKDKILDKEAIPVHQQRLMFANELLDDSQTLANYNIQEKATLHLILRLP