AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74054


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74054.t1 MTR_7g024290 89.062 320 32 1 1 320 1 317 0.0 580
MS.gene74054.t1 MTR_5g067400 77.743 319 67 2 1 319 1 315 6.85e-178 494
MS.gene74054.t1 MTR_1g046640 76.875 320 69 3 1 320 1 315 6.30e-176 489
MS.gene74054.t1 MTR_1g046650 73.750 320 79 3 1 320 1 315 1.17e-168 471
MS.gene74054.t1 MTR_1g046650 73.750 320 79 3 1 320 32 346 3.22e-168 471
MS.gene74054.t1 MTR_7g094390 73.270 318 81 2 3 320 164 477 5.42e-163 463
MS.gene74054.t1 MTR_5g076720 71.340 321 85 3 3 320 74 390 2.95e-158 447
MS.gene74054.t1 MTR_1g046650 74.237 295 71 3 26 320 26 315 2.15e-154 435
MS.gene74054.t1 MTR_5g076810 78.676 272 53 3 49 319 2 269 2.91e-146 412
MS.gene74054.t1 MTR_5g076660 69.401 317 90 3 4 317 26 338 1.08e-145 414
MS.gene74054.t1 MTR_5g061290 65.635 323 99 5 4 320 11 327 3.80e-144 409
MS.gene74054.t1 MTR_2g038430 64.545 330 100 4 4 320 18 343 5.34e-144 410
MS.gene74054.t1 MTR_5g076370 66.667 318 98 4 4 317 26 339 9.41e-143 406
MS.gene74054.t1 MTR_5g076520 68.139 317 93 4 1 313 1 313 6.63e-142 404
MS.gene74054.t1 MTR_2g038420 66.149 322 100 4 4 320 18 335 7.35e-142 404
MS.gene74054.t1 MTR_5g076505 68.350 297 87 3 27 320 23 315 8.05e-137 390
MS.gene74054.t1 MTR_5g076820 71.626 289 72 6 1 284 10 293 4.00e-136 388
MS.gene74054.t1 MTR_1g046650 72.908 251 63 3 70 320 1 246 1.72e-126 362
MS.gene74054.t1 MTR_5g076540 73.160 231 59 1 1 231 1 228 3.95e-114 330
MS.gene74054.t1 MTR_5g077020 68.159 201 48 5 53 244 17 210 2.68e-84 254
MS.gene74054.t1 MTR_4g094468 46.396 222 115 2 6 227 92 309 9.21e-66 210
MS.gene74054.t1 MTR_4g058025 75.573 131 28 2 68 197 1 128 2.10e-59 189
MS.gene74054.t1 MTR_5g061310 70.513 78 22 1 243 320 1 77 5.71e-29 106
MS.gene74054.t1 MTR_3g017590 26.606 218 151 4 5 213 45 262 4.47e-23 97.4
MS.gene74054.t1 MTR_8g038370 28.910 211 143 4 10 213 111 321 1.11e-22 97.1
MS.gene74054.t1 MTR_7g085590 26.337 243 161 4 5 243 57 285 1.56e-22 95.5
MS.gene74054.t1 MTR_3g091510 28.436 211 144 3 10 213 59 269 1.53e-21 93.6
MS.gene74054.t1 MTR_7g117415 25.660 265 177 4 3 260 53 304 1.59e-21 93.6
MS.gene74054.t1 MTR_8g027520 26.038 265 176 4 3 260 36 287 6.13e-21 91.7
MS.gene74054.t1 MTR_8g027520 26.038 265 176 4 3 260 45 296 7.01e-21 91.7
MS.gene74054.t1 MTR_1g054335 27.143 210 146 3 11 213 58 267 2.64e-20 89.7
MS.gene74054.t1 MTR_1g008120 27.014 211 147 3 10 213 67 277 8.93e-20 88.6
MS.gene74054.t1 MTR_7g093600 26.667 210 147 3 11 213 59 268 2.22e-19 87.0
MS.gene74054.t1 MTR_7g105080 63.158 76 27 1 244 319 1 75 1.09e-18 81.3
MS.gene74054.t1 MTR_3g092130 63.158 76 27 1 244 319 1 75 1.09e-18 81.3
MS.gene74054.t1 MTR_1g059690 63.158 76 27 1 244 319 1 75 1.09e-18 81.3
MS.gene74054.t1 MTR_5g092700 63.158 76 27 1 244 319 1 75 1.39e-18 81.6
MS.gene74054.t1 MTR_4g073580 63.158 76 27 1 244 319 1 75 1.39e-18 81.6
MS.gene74054.t1 MTR_7g116360 55.789 95 41 1 225 319 30 123 1.69e-18 84.3
MS.gene74054.t1 MTR_7g116360 58.140 86 35 1 234 319 115 199 2.48e-17 80.9
MS.gene74054.t1 MTR_7g116360 58.140 86 35 1 234 319 191 275 2.48e-17 80.9
MS.gene74054.t1 MTR_8g088060 63.158 76 27 1 244 319 1 75 1.72e-18 81.3
MS.gene74054.t1 MTR_5g033960 63.158 76 27 1 244 319 1 75 1.87e-18 81.3
MS.gene74054.t1 MTR_3g092130 63.158 76 27 1 244 319 1 75 2.13e-18 80.5
MS.gene74054.t1 MTR_4g073580 63.158 76 27 1 244 319 1 75 3.48e-18 81.3
MS.gene74054.t1 MTR_4g009980 54.167 72 32 1 249 320 1 71 4.79e-18 77.4
MS.gene74054.t1 MTR_4g088485 63.158 76 27 1 244 319 1 75 7.14e-18 81.3
MS.gene74054.t1 MTR_4g088485 63.158 76 27 1 244 319 138 212 7.14e-18 81.3
MS.gene74054.t1 MTR_1g066390 63.158 76 27 1 244 319 1 75 7.81e-18 81.6
MS.gene74054.t1 MTR_1g066390 63.158 76 27 1 244 319 77 151 7.81e-18 81.6
MS.gene74054.t1 MTR_1g066390 63.158 76 27 1 244 319 153 227 7.81e-18 81.6
MS.gene74054.t1 MTR_7g116360 63.158 76 27 1 244 319 1 75 8.37e-18 81.3
MS.gene74054.t1 MTR_7g116360 63.158 76 27 1 244 319 77 151 8.37e-18 81.3
MS.gene74054.t1 MTR_7g116360 63.158 76 27 1 244 319 153 227 8.37e-18 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 1 75 1.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 77 151 1.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 153 227 1.94e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 1 75 1.98e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 77 151 1.98e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 153 227 1.98e-17 81.3
MS.gene74054.t1 MTR_6g061930 63.158 76 27 1 244 319 1 75 2.56e-17 81.3
MS.gene74054.t1 MTR_6g061930 63.158 76 27 1 244 319 77 151 2.56e-17 81.3
MS.gene74054.t1 MTR_6g061930 63.158 76 27 1 244 319 214 288 2.56e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 1 75 2.66e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 77 151 2.66e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 153 227 2.66e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 229 303 2.66e-17 81.3
MS.gene74054.t1 MTR_4g080920 61.842 76 28 1 244 319 77 151 3.20e-17 79.7
MS.gene74054.t1 MTR_4g080920 61.842 76 28 1 244 319 1 75 6.49e-17 79.0
MS.gene74054.t1 MTR_4g080920 52.632 76 35 1 244 319 153 227 1.58e-12 66.6
MS.gene74054.t1 MTR_4g091580 63.158 76 27 1 244 319 1 75 4.80e-17 81.3
MS.gene74054.t1 MTR_4g091580 63.158 76 27 1 244 319 77 151 4.80e-17 81.3
MS.gene74054.t1 MTR_4g091580 63.158 76 27 1 244 319 153 227 4.80e-17 81.3
MS.gene74054.t1 MTR_4g091580 63.158 76 27 1 244 319 305 379 4.80e-17 81.3
MS.gene74054.t1 MTR_4g091580 61.842 76 28 1 244 319 229 303 1.56e-16 79.7
MS.gene74054.t1 MTR_4g080797 63.158 76 27 1 244 319 1 75 4.84e-17 81.3
MS.gene74054.t1 MTR_4g080797 63.158 76 27 1 244 319 77 151 4.84e-17 81.3
MS.gene74054.t1 MTR_4g080797 63.158 76 27 1 244 319 153 227 4.84e-17 81.3
MS.gene74054.t1 MTR_4g080797 63.158 76 27 1 244 319 229 303 4.84e-17 81.3
MS.gene74054.t1 MTR_4g080797 63.158 76 27 1 244 319 305 379 4.84e-17 81.3
MS.gene74054.t1 MTR_8g081020 63.158 76 27 1 244 319 1 75 4.84e-17 81.3
MS.gene74054.t1 MTR_8g081020 63.158 76 27 1 244 319 77 151 4.84e-17 81.3
MS.gene74054.t1 MTR_8g081020 63.158 76 27 1 244 319 153 227 4.84e-17 81.3
MS.gene74054.t1 MTR_8g081020 63.158 76 27 1 244 319 229 303 4.84e-17 81.3
MS.gene74054.t1 MTR_8g081020 63.158 76 27 1 244 319 305 379 4.84e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 1 75 4.84e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 77 151 4.84e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 153 227 4.84e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 229 303 4.84e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 305 379 4.84e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 1 75 5.13e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 77 151 5.13e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 153 227 5.13e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 229 303 5.13e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 305 379 5.13e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 1 75 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 77 151 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 153 227 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 229 303 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 305 379 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 381 455 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 1 75 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 77 151 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 153 227 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 229 303 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 305 379 6.94e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 381 455 6.94e-17 81.3
MS.gene74054.t1 MTR_4g091580 61.842 76 28 1 244 319 305 379 7.87e-17 81.3
MS.gene74054.t1 MTR_4g091580 63.158 76 27 1 244 319 1 75 8.40e-17 81.3
MS.gene74054.t1 MTR_4g091580 63.158 76 27 1 244 319 77 151 8.40e-17 81.3
MS.gene74054.t1 MTR_4g091580 63.158 76 27 1 244 319 153 227 8.40e-17 81.3
MS.gene74054.t1 MTR_4g091580 63.158 76 27 1 244 319 229 303 8.40e-17 81.3
MS.gene74054.t1 MTR_4g091580 63.158 76 27 1 244 319 381 455 8.40e-17 81.3
MS.gene74054.t1 MTR_4g091580 63.158 76 27 1 244 319 457 531 8.40e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 1 75 8.02e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 77 151 8.02e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 153 227 8.02e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 229 303 8.02e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 305 379 8.02e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 381 455 8.02e-17 81.3
MS.gene74054.t1 MTR_8g018230 63.158 76 27 1 244 319 457 531 8.02e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 1 75 8.17e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 77 151 8.17e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 153 227 8.17e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 229 303 8.17e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 305 379 8.17e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 381 455 8.17e-17 81.3
MS.gene74054.t1 MTR_4g081010 63.158 76 27 1 244 319 457 531 8.17e-17 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 77 151 1.08e-16 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 153 227 1.08e-16 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 229 303 1.08e-16 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 305 379 1.08e-16 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 381 455 1.08e-16 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 457 531 1.08e-16 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 533 607 1.08e-16 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 609 683 1.08e-16 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 685 759 1.08e-16 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 761 835 1.08e-16 81.3
MS.gene74054.t1 MTR_4g088495 63.158 76 27 1 244 319 1 75 1.43e-16 80.9
MS.gene74054.t1 MTR_8g479250 58.140 86 35 1 234 319 131 215 6.43e-16 77.4
MS.gene74054.t1 MTR_5g076760 63.793 58 20 1 254 311 5 61 8.17e-15 68.9
MS.gene74054.t1 MTR_5g076780 58.730 63 25 1 255 317 1 62 5.48e-14 66.2
MS.gene74054.t1 MTR_5g076350 51.282 78 36 2 244 320 8 84 1.95e-13 65.5
MS.gene74054.t1 MTR_5g076740 58.824 68 26 2 244 310 86 152 3.60e-13 67.0
MS.gene74054.t1 MTR_5g076340 50.633 79 36 3 244 320 9 86 1.05e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74054.t1 AT5G37930 35.685 241 148 3 4 240 103 340 9.17e-47 161
MS.gene74054.t1 AT1G66660 32.389 247 160 4 2 241 94 340 1.16e-38 140
MS.gene74054.t1 AT5G37870 32.661 248 157 7 6 246 37 281 1.72e-38 138
MS.gene74054.t1 AT1G66620 32.377 244 153 4 5 240 35 274 4.69e-38 137
MS.gene74054.t1 AT5G37890 34.081 223 138 5 10 227 47 265 5.99e-38 136
MS.gene74054.t1 AT1G66630 32.685 257 152 4 5 240 40 296 1.42e-37 136
MS.gene74054.t1 AT1G66650 32.389 247 155 8 4 240 76 320 6.00e-36 132
MS.gene74054.t1 AT5G37910 30.488 246 154 6 11 249 35 270 1.29e-31 119
MS.gene74054.t1 AT5G62800 30.620 258 169 6 11 260 40 295 6.96e-30 116
MS.gene74054.t1 AT5G62800 35.638 188 114 4 11 193 40 225 3.95e-29 114
MS.gene74054.t1 AT3G61790 27.650 217 150 3 3 212 52 268 3.18e-21 92.8
MS.gene74054.t1 AT1G66660 28.641 206 138 5 43 241 13 216 2.44e-20 88.2
MS.gene74054.t1 AT4G27880 27.143 210 146 3 10 212 60 269 9.43e-20 88.6
MS.gene74054.t1 AT3G58040 26.106 226 159 4 10 227 56 281 6.08e-19 85.9
MS.gene74054.t1 AT3G58040 26.106 226 159 4 10 227 56 281 6.08e-19 85.9
MS.gene74054.t1 AT2G41980 25.203 246 170 5 10 241 53 298 7.34e-19 85.9
MS.gene74054.t1 AT2G47110 63.158 76 27 1 244 319 1 75 1.22e-18 82.0
MS.gene74054.t1 AT2G47110 63.158 76 27 1 244 319 1 75 1.22e-18 82.0
MS.gene74054.t1 AT1G23410 63.158 76 27 1 244 319 1 75 1.25e-18 81.6
MS.gene74054.t1 AT3G62250 63.158 76 27 1 244 319 1 75 1.28e-18 81.6
MS.gene74054.t1 AT3G52590 63.158 76 27 1 244 319 1 75 1.48e-18 80.9
MS.gene74054.t1 AT2G36170 63.158 76 27 1 244 319 1 75 1.48e-18 80.9
MS.gene74054.t1 AT2G35635 63.158 76 27 1 244 319 1 75 1.72e-18 81.3
MS.gene74054.t1 AT1G31340 63.158 76 27 1 244 319 1 75 1.79e-18 81.3
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 1 75 1.86e-18 81.3
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 77 151 1.86e-18 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 1 75 1.86e-18 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 77 151 1.86e-18 81.3
MS.gene74054.t1 AT5G37640 59.302 86 34 1 234 319 69 153 5.13e-18 83.6
MS.gene74054.t1 AT5G37640 63.158 76 27 1 244 319 155 229 2.68e-17 81.6
MS.gene74054.t1 AT5G37640 62.338 77 27 2 244 319 231 306 3.85e-16 78.2
MS.gene74054.t1 AT5G37640 55.263 76 33 1 244 319 3 77 1.17e-12 68.2
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 1 75 8.76e-18 81.3
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 77 151 8.76e-18 81.3
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 153 227 8.76e-18 81.3
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 1 75 8.76e-18 81.3
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 77 151 8.76e-18 81.3
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 153 227 8.76e-18 81.3
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 1 75 8.76e-18 81.3
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 77 151 8.76e-18 81.3
MS.gene74054.t1 AT4G05050 63.158 76 27 1 244 319 153 227 8.76e-18 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 1 75 8.76e-18 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 77 151 8.76e-18 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 153 227 8.76e-18 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 1 75 8.76e-18 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 77 151 8.76e-18 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 153 227 8.76e-18 81.3
MS.gene74054.t1 AT1G65350 63.158 76 27 1 244 319 152 226 2.62e-17 81.6
MS.gene74054.t1 AT1G65350 63.158 76 27 1 244 319 1 75 2.83e-17 81.3
MS.gene74054.t1 AT1G65350 61.842 76 27 2 244 319 77 150 1.42e-14 73.6
MS.gene74054.t1 AT1G65350 51.111 90 29 3 244 319 228 316 3.98e-11 63.5
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 1 75 2.68e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 77 151 2.68e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 153 227 2.68e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 229 303 2.68e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 1 75 2.68e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 77 151 2.68e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 153 227 2.68e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 229 303 2.68e-17 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 1 75 2.68e-17 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 77 151 2.68e-17 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 153 227 2.68e-17 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 229 303 2.68e-17 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 1 75 2.68e-17 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 77 151 2.68e-17 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 153 227 2.68e-17 81.3
MS.gene74054.t1 AT4G02890 63.158 76 27 1 244 319 229 303 2.68e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 1 75 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 77 151 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 153 227 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 229 303 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 1 75 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 77 151 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 153 227 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 229 303 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 1 75 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 77 151 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 153 227 2.76e-17 81.3
MS.gene74054.t1 AT5G03240 63.158 76 27 1 244 319 229 303 2.76e-17 81.3
MS.gene74054.t1 AT5G20620 63.158 76 27 1 244 319 1 75 2.76e-17 81.3
MS.gene74054.t1 AT5G20620 63.158 76 27 1 244 319 77 151 2.76e-17 81.3
MS.gene74054.t1 AT5G20620 63.158 76 27 1 244 319 153 227 2.76e-17 81.3
MS.gene74054.t1 AT5G20620 63.158 76 27 1 244 319 229 303 2.76e-17 81.3
MS.gene74054.t1 AT1G55060 61.842 76 28 1 244 319 77 151 3.04e-17 79.7
MS.gene74054.t1 AT1G55060 56.977 86 36 1 234 319 143 227 6.95e-17 79.0
MS.gene74054.t1 AT1G55060 55.263 76 33 1 244 319 1 75 1.23e-13 69.7
MS.gene74054.t1 AT5G20620 63.158 76 27 1 244 319 1 75 4.82e-17 81.3
MS.gene74054.t1 AT5G20620 63.158 76 27 1 244 319 77 151 4.82e-17 81.3
MS.gene74054.t1 AT5G20620 63.158 76 27 1 244 319 153 227 4.82e-17 81.3
MS.gene74054.t1 AT5G20620 63.158 76 27 1 244 319 229 303 4.82e-17 81.3
MS.gene74054.t1 AT5G20620 63.158 76 27 1 244 319 305 379 4.82e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 1 75 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 77 151 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 153 227 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 229 303 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 305 379 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 1 75 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 77 151 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 153 227 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 229 303 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 305 379 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 1 75 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 77 151 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 153 227 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 229 303 5.07e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 305 379 5.07e-17 81.3
MS.gene74054.t1 AT3G09790 59.302 86 34 1 234 319 69 153 6.24e-17 82.0
MS.gene74054.t1 AT3G09790 59.211 76 30 1 244 319 3 77 1.45e-15 77.8
MS.gene74054.t1 AT3G09790 59.722 72 28 1 244 314 319 390 9.05e-15 75.5
MS.gene74054.t1 AT3G09790 56.757 74 31 1 244 317 552 624 4.77e-13 70.1
MS.gene74054.t1 AT3G09790 59.302 86 34 1 234 319 69 153 6.24e-17 82.0
MS.gene74054.t1 AT3G09790 59.211 76 30 1 244 319 3 77 1.45e-15 77.8
MS.gene74054.t1 AT3G09790 59.722 72 28 1 244 314 319 390 9.05e-15 75.5
MS.gene74054.t1 AT3G09790 56.757 74 31 1 244 317 552 624 4.77e-13 70.1
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 1 75 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 77 151 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 153 227 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 229 303 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 305 379 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 381 455 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 1 75 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 77 151 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 153 227 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 229 303 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 305 379 7.27e-17 81.3
MS.gene74054.t1 AT4G05320 63.158 76 27 1 244 319 381 455 7.27e-17 81.3
MS.gene74054.t1 AT3G58040 31.343 134 89 2 10 140 56 189 2.24e-16 77.0
MS.gene74054.t1 AT1G66610 24.915 293 145 10 5 227 47 334 4.60e-15 75.5
MS.gene74054.t1 AT1G53930 53.333 75 34 1 243 317 85 158 6.80e-15 71.6
MS.gene74054.t1 AT1G66610 43.210 81 46 0 5 85 152 232 2.73e-14 71.6
MS.gene74054.t1 AT1G66610 43.478 69 39 0 5 73 47 115 9.26e-12 64.3
MS.gene74054.t1 AT5G37900 24.779 226 135 4 5 227 26 219 9.45e-12 64.3
MS.gene74054.t1 AT1G11980 44.737 76 41 1 244 319 1 75 3.24e-11 58.9

Find 69 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGTTACTGTCCCCTTTC+AGG 0.120847 7.4:+77076478 MS.gene74054:CDS
TGCATTGGTCCTAACTCTTC+TGG 0.129441 7.4:+77076718 MS.gene74054:CDS
TTTGAGAATCCCCATGTTTA+TGG 0.156135 7.4:-77076546 None:intergenic
TCTAAGTATTCCTGTCTTTC+AGG 0.178018 7.4:+77075064 MS.gene74054:CDS
CTTCTCTTGGATGTTGTAAT+TGG 0.203344 7.4:-77077436 None:intergenic
ACCTCGTCCGCCGCCTCATT+GGG 0.219551 7.4:+77077469 MS.gene74054:CDS
CACCTCGTCCGCCGCCTCAT+TGG 0.223387 7.4:+77077468 MS.gene74054:CDS
CAATAATAATACTATGAGTT+TGG 0.238456 7.4:+77076675 MS.gene74054:CDS
AAATGAGTTACACTGGAAAT+AGG 0.344851 7.4:+77076428 MS.gene74054:CDS
TGACACTTGTTCCTAAGTTT+AGG 0.348740 7.4:-77076301 None:intergenic
ATTGTCTCTTTGAAGTCTAA+TGG 0.349492 7.4:+77076595 MS.gene74054:CDS
AATAATAATACTATGAGTTT+GGG 0.365875 7.4:+77076676 MS.gene74054:CDS
CGAGTATAGTTATGATATAT+TGG 0.382189 7.4:+77076744 MS.gene74054:CDS
CGAATGCAAAACATGGTTGC+AGG 0.390717 7.4:+77076401 MS.gene74054:CDS
TGAGGCGGCGGACGAGGTGG+AGG 0.397557 7.4:-77077464 None:intergenic
GTTGTAATTCAGTGTAATAA+TGG 0.398533 7.4:+77076253 MS.gene74054:intron
GCATTGGTCCTAACTCTTCT+GGG 0.401380 7.4:+77076719 MS.gene74054:CDS
CCCCATGTTTATGGCTGAAA+TGG 0.405710 7.4:-77076537 None:intergenic
GGTGGAGGGTTGACTTCTCT+TGG 0.426648 7.4:-77077449 None:intergenic
TTGAAGTCTAATGGTGAAAC+TGG 0.431863 7.4:+77076604 MS.gene74054:CDS
CCCCAATGAGGCGGCGGACG+AGG 0.435771 7.4:-77077470 None:intergenic
GCAGTCAATATTTGCTGCAT+TGG 0.437797 7.4:+77076703 MS.gene74054:CDS
GTGCAACGTCTGATCTTTGA+TGG 0.439374 7.4:+77077384 MS.gene74054:CDS
AACAAAGTCACAACCTGAAA+GGG 0.450677 7.4:-77076491 None:intergenic
CTTGGATGTTGTAATTGGCA+AGG 0.467473 7.4:-77077431 None:intergenic
TGTTGTAATTGGCAAGGGTC+AGG 0.472186 7.4:-77077425 None:intergenic
TGTCTGAACTCTTAACCCTC+AGG 0.476108 7.4:-77077305 None:intergenic
TGAAAGACAGGAATACTTAG+AGG 0.482175 7.4:-77075062 None:intergenic
TACTCGGACCCAGAAGAGTT+AGG 0.488196 7.4:-77076727 None:intergenic
GTTCCTAAGTTTAGGACAGC+AGG 0.503985 7.4:-77076293 None:intergenic
CTACCTGCTGTCCTAAACTT+AGG 0.504618 7.4:+77076290 MS.gene74054:CDS
CAATATATCATAACTATACT+CGG 0.508438 7.4:-77076743 None:intergenic
CAAATGCATACCTGAAAGAC+AGG 0.508688 7.4:-77075074 None:intergenic
GGGGATCATCTTCCTAGTCT+GGG 0.516522 7.4:-77077283 None:intergenic
ATGCAAATTTCTAGCTTGAG+AGG 0.521687 7.4:-77076880 None:intergenic
TGACAAGGCAGAAGAGTACC+AGG 0.525376 7.4:+77077356 MS.gene74054:CDS
AGAGGTTCAGAAGAACGAAA+AGG 0.531913 7.4:-77076862 None:intergenic
AGATTGCAATAGATTCTCAA+TGG 0.536387 7.4:-77076362 None:intergenic
GTCTGAACTCTTAACCCTCA+GGG 0.537566 7.4:-77077304 None:intergenic
TCAGACGTTGCACGTGCACC+TGG 0.539988 7.4:-77077374 None:intergenic
CAACAAAGTCACAACCTGAA+AGG 0.540955 7.4:-77076492 None:intergenic
TTGGATGTTGTAATTGGCAA+GGG 0.555821 7.4:-77077430 None:intergenic
TGAAACCATTGTTCTTCAAG+AGG 0.562120 7.4:+77076627 MS.gene74054:CDS
AACCATTTCAGCCATAAACA+TGG 0.562638 7.4:+77076535 MS.gene74054:CDS
CCTCGTCCGCCGCCTCATTG+GGG 0.567548 7.4:+77077470 MS.gene74054:CDS
CAATGAGGCGGCGGACGAGG+TGG 0.572390 7.4:-77077467 None:intergenic
GAGGCGGCGGACGAGGTGGA+GGG 0.577818 7.4:-77077463 None:intergenic
ACCATTTCAGCCATAAACAT+GGG 0.579017 7.4:+77076536 MS.gene74054:CDS
ATGTTTATGGCTGAAATGGT+TGG 0.588725 7.4:-77076533 None:intergenic
TCTAGTCCCCAATGAGGCGG+CGG 0.601596 7.4:-77077476 None:intergenic
TCTACGTAATCACCCAGACT+AGG 0.601778 7.4:+77077271 MS.gene74054:CDS
ATAGTTATGATATATTGGCT+AGG 0.603327 7.4:+77076749 MS.gene74054:CDS
TTAGAGTTTGAAATCGTCAG+AGG 0.607477 7.4:-77075011 None:intergenic
CCTGAAAGGGGACAGTAACA+TGG 0.607535 7.4:-77076478 None:intergenic
AGACTTCAAAGAGACAATGA+AGG 0.614201 7.4:-77076590 None:intergenic
GAGTTGCTAAAGTAAACTGT+TGG 0.616702 7.4:-77076816 None:intergenic
GTTCTTCAAGAGGAAAATGA+CGG 0.617899 7.4:+77076637 MS.gene74054:CDS
GAATGCAAAACATGGTTGCA+GGG 0.629567 7.4:+77076402 MS.gene74054:CDS
AGAAATTTGCATAACACCCA+TGG 0.629605 7.4:+77076891 MS.gene74054:CDS
AGGGAGAAAATGAGTTACAC+TGG 0.636460 7.4:+77076421 MS.gene74054:CDS
CCATGTCCGAATGCAAAACA+TGG 0.639006 7.4:+77076394 MS.gene74054:CDS
ACAAAGTCACAACCTGAAAG+GGG 0.645303 7.4:-77076490 None:intergenic
CCATTTCAGCCATAAACATG+GGG 0.653718 7.4:+77076537 MS.gene74054:CDS
AGACACAATAGCCAATGTGA+AGG 0.658191 7.4:+77077323 MS.gene74054:CDS
CTGAACTCTTAACCCTCAGG+GGG 0.662405 7.4:-77077302 None:intergenic
TCATCTAGTCCCCAATGAGG+CGG 0.663039 7.4:-77077479 None:intergenic
TCTGAACTCTTAACCCTCAG+GGG 0.679402 7.4:-77077303 None:intergenic
AAGAACGAAAAGGAATCACA+AGG 0.699518 7.4:-77076852 None:intergenic
TGGTCATCTAGTCCCCAATG+AGG 0.703849 7.4:-77077482 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTTTGATAATATCTT+AGG + chr7.4:77075368-77075387 MS.gene74054:intron 10.0%
!!! ATATTCTTTTATTGATTTAA+TGG + chr7.4:77077228-77077247 MS.gene74054:intron 10.0%
!! AAAAAAAAAAAACAGAGAAA+AGG - chr7.4:77076929-77076948 None:intergenic 15.0%
!! AATAATAATACTATGAGTTT+GGG + chr7.4:77076676-77076695 MS.gene74054:CDS 15.0%
!! CTAAATATGAGTATATAATT+GGG - chr7.4:77075449-77075468 None:intergenic 15.0%
!! GAAAATAATAAGACTTTAAT+TGG - chr7.4:77076958-77076977 None:intergenic 15.0%
!! TAAATATGAGTATATAATTG+GGG - chr7.4:77075448-77075467 None:intergenic 15.0%
!! ATATATATGCAATATGTATC+TGG + chr7.4:77075143-77075162 MS.gene74054:intron 20.0%
!! CAATAATAATACTATGAGTT+TGG + chr7.4:77076675-77076694 MS.gene74054:CDS 20.0%
!! CAATATATCATAACTATACT+CGG - chr7.4:77076746-77076765 None:intergenic 20.0%
!! CCAATTATATACTCATATTT+AGG + chr7.4:77075447-77075466 MS.gene74054:intron 20.0%
!! CCTAAATATGAGTATATAAT+TGG - chr7.4:77075450-77075469 None:intergenic 20.0%
!! TATAAAAGCTCAAAAATAGA+AGG - chr7.4:77075969-77075988 None:intergenic 20.0%
!!! CTATTTTTGAGCTTTTATAT+GGG + chr7.4:77075970-77075989 MS.gene74054:intron 20.0%
!!! TCTATTTTTGAGCTTTTATA+TGG + chr7.4:77075969-77075988 MS.gene74054:intron 20.0%
!!! TCTCAAATCAAATTTTCTTA+TGG + chr7.4:77076562-77076581 MS.gene74054:CDS 20.0%
!!! TTTTATTGATTTAATGGCAA+TGG + chr7.4:77077234-77077253 MS.gene74054:intron 20.0%
! AAAATCAATGTACTCAAAGA+CGG - chr7.4:77076091-77076110 None:intergenic 25.0%
! AAAATTTATCCAAAATCCGT+TGG - chr7.4:77075357-77075376 None:intergenic 25.0%
! AAAATTTATTACGGTACAAC+TGG - chr7.4:77077136-77077155 None:intergenic 25.0%
! AAAGTTTAGAGAAACAATAC+AGG - chr7.4:77076007-77076026 None:intergenic 25.0%
! AAATTTATCCAAAATCCGTT+GGG - chr7.4:77075356-77075375 None:intergenic 25.0%
! AAATTTATTACGGTACAACT+GGG - chr7.4:77077135-77077154 None:intergenic 25.0%
! AACATAGAATTCACTTTAGA+GGG + chr7.4:77075492-77075511 MS.gene74054:intron 25.0%
! AACTGTTAATTAGAAAATGC+AGG + chr7.4:77075531-77075550 MS.gene74054:intron 25.0%
! ATAGAGACACAAAACAATTA+GGG + chr7.4:77075695-77075714 MS.gene74054:intron 25.0%
! CGAGTATAGTTATGATATAT+TGG + chr7.4:77076744-77076763 MS.gene74054:CDS 25.0%
! GTTGTAATTCAGTGTAATAA+TGG + chr7.4:77076253-77076272 MS.gene74054:intron 25.0%
! TAACATAGAATTCACTTTAG+AGG + chr7.4:77075491-77075510 MS.gene74054:intron 25.0%
! TATAGAGACACAAAACAATT+AGG + chr7.4:77075694-77075713 MS.gene74054:intron 25.0%
!! AAGACTTGTTTGATTTACAT+TGG + chr7.4:77075881-77075900 MS.gene74054:intron 25.0%
!! ACTTGATTTTCTCACTTTAA+AGG + chr7.4:77075604-77075623 MS.gene74054:intron 25.0%
!! AGACTTGTTTGATTTACATT+GGG + chr7.4:77075882-77075901 MS.gene74054:intron 25.0%
!! ATAGTTATGATATATTGGCT+AGG + chr7.4:77076749-77076768 MS.gene74054:CDS 25.0%
!! CTATACTGCTATAGTATTTT+GGG + chr7.4:77076052-77076071 MS.gene74054:intron 25.0%
!! CTTTATTTGATTCTAGCAAA+TGG + chr7.4:77076199-77076218 MS.gene74054:intron 25.0%
!! TACCGTAATAAATTTTGCAA+GGG + chr7.4:77077140-77077159 MS.gene74054:intron 25.0%
!! TGTATTGTTTCTCTAAACTT+TGG + chr7.4:77076006-77076025 MS.gene74054:intron 25.0%
!!! AAAGACTAACAACCTTATTT+TGG - chr7.4:77077040-77077059 None:intergenic 25.0%
!!! AAGACTAACAACCTTATTTT+GGG - chr7.4:77077039-77077058 None:intergenic 25.0%
!!! AATTGTTTTGTGTCTCTATA+GGG - chr7.4:77075694-77075713 None:intergenic 25.0%
!!! TAATTGTTTTGTGTCTCTAT+AGG - chr7.4:77075695-77075714 None:intergenic 25.0%
!!! TGGTTCAAAGTTTAATTTGA+TGG + chr7.4:77076219-77076238 MS.gene74054:intron 25.0%
AAAAACAGAGAAAAGGAGAT+AGG - chr7.4:77076922-77076941 None:intergenic 30.0%
AAAAATCATCTCCTTCACAT+TGG - chr7.4:77077337-77077356 None:intergenic 30.0%
AAATACTATAGCAGTATAGC+AGG - chr7.4:77076051-77076070 None:intergenic 30.0%
AAATGAGTTACACTGGAAAT+AGG + chr7.4:77076428-77076447 MS.gene74054:CDS 30.0%
ACCCCTTGCAAAATTTATTA+CGG - chr7.4:77077145-77077164 None:intergenic 30.0%
AGATTGCAATAGATTCTCAA+TGG - chr7.4:77076365-77076384 None:intergenic 30.0%
GATTAATGTGTTGTCAATTG+CGG + chr7.4:77077194-77077213 MS.gene74054:intron 30.0%
GTCGCTAATTTAAAAACTCT+TGG - chr7.4:77075584-77075603 None:intergenic 30.0%
TAGTAGGAAACAGAAAAGAA+TGG + chr7.4:77075655-77075674 MS.gene74054:intron 30.0%
TTCTCTAAACTTTGGTATTG+TGG + chr7.4:77076014-77076033 MS.gene74054:intron 30.0%
! AATTCATGATGATGAGTAAG+TGG + chr7.4:77075774-77075793 MS.gene74054:intron 30.0%
! ACCGTAATAAATTTTGCAAG+GGG + chr7.4:77077141-77077160 MS.gene74054:intron 30.0%
! ATTTTCCTCTTGAAGAACAA+TGG - chr7.4:77076635-77076654 None:intergenic 30.0%
! GCGTTTTATCTCAAATTCAT+CGG + chr7.4:77077003-77077022 MS.gene74054:intron 30.0%
! GCTATACTGCTATAGTATTT+TGG + chr7.4:77076051-77076070 MS.gene74054:intron 30.0%
! GTACCGTAATAAATTTTGCA+AGG + chr7.4:77077139-77077158 MS.gene74054:intron 30.0%
! GTTTTGCATATCCCAAAATA+AGG + chr7.4:77077025-77077044 MS.gene74054:intron 30.0%
!! ATTGTCTCTTTGAAGTCTAA+TGG + chr7.4:77076595-77076614 MS.gene74054:CDS 30.0%
!! CAGTTTTGTAAAGTTGAGTT+AGG - chr7.4:77075406-77075425 None:intergenic 30.0%
!! CTTTACAAAACTGACTTGTA+AGG + chr7.4:77075413-77075432 MS.gene74054:intron 30.0%
!!! ATGTGTTTTTTAAGCCTTAG+AGG + chr7.4:77075856-77075875 MS.gene74054:intron 30.0%
AACAAAGTCACAACCTGAAA+GGG - chr7.4:77076494-77076513 None:intergenic 35.0%
AACCATTTCAGCCATAAACA+TGG + chr7.4:77076535-77076554 MS.gene74054:CDS 35.0%
AAGAACGAAAAGGAATCACA+AGG - chr7.4:77076855-77076874 None:intergenic 35.0%
ACCATTTCAGCCATAAACAT+GGG + chr7.4:77076536-77076555 MS.gene74054:CDS 35.0%
AGAAAATGCAGGATCGATAT+TGG + chr7.4:77075542-77075561 MS.gene74054:intron 35.0%
AGAAATTTGCATAACACCCA+TGG + chr7.4:77076891-77076910 MS.gene74054:CDS 35.0%
AGACTTCAAAGAGACAATGA+AGG - chr7.4:77076593-77076612 None:intergenic 35.0%
ATGTTTATGGCTGAAATGGT+TGG - chr7.4:77076536-77076555 None:intergenic 35.0%
CTTCTCTTGGATGTTGTAAT+TGG - chr7.4:77077439-77077458 None:intergenic 35.0%
GAGTTGCTAAAGTAAACTGT+TGG - chr7.4:77076819-77076838 None:intergenic 35.0%
GTTCTTCAAGAGGAAAATGA+CGG + chr7.4:77076637-77076656 MS.gene74054:CDS 35.0%
TCTAAGTATTCCTGTCTTTC+AGG + chr7.4:77075064-77075083 MS.gene74054:CDS 35.0%
TGAAACCATTGTTCTTCAAG+AGG + chr7.4:77076627-77076646 MS.gene74054:CDS 35.0%
TGAAAGACAGGAATACTTAG+AGG - chr7.4:77075065-77075084 None:intergenic 35.0%
TGACACTTGTTCCTAAGTTT+AGG - chr7.4:77076304-77076323 None:intergenic 35.0%
TTGAAGTCTAATGGTGAAAC+TGG + chr7.4:77076604-77076623 MS.gene74054:CDS 35.0%
TTGGATGTTGTAATTGGCAA+GGG - chr7.4:77077433-77077452 None:intergenic 35.0%
TTTGAGAATCCCCATGTTTA+TGG - chr7.4:77076549-77076568 None:intergenic 35.0%
! GAAGGAGATGATTTTTGACA+AGG + chr7.4:77077341-77077360 MS.gene74054:CDS 35.0%
! TTAGAGTTTGAAATCGTCAG+AGG - chr7.4:77075014-77075033 None:intergenic 35.0%
!! ATGCAAATTTCTAGCTTGAG+AGG - chr7.4:77076883-77076902 None:intergenic 35.0%
AACAGAGAAAAGGAGATAGG+AGG - chr7.4:77076919-77076938 None:intergenic 40.0%
ACAAAGTCACAACCTGAAAG+GGG - chr7.4:77076493-77076512 None:intergenic 40.0%
AGACACAATAGCCAATGTGA+AGG + chr7.4:77077323-77077342 MS.gene74054:CDS 40.0%
AGAGGTTCAGAAGAACGAAA+AGG - chr7.4:77076865-77076884 None:intergenic 40.0%
AGGGAGAAAATGAGTTACAC+TGG + chr7.4:77076421-77076440 MS.gene74054:CDS 40.0%
CAAACAAGTCTTTGCCTCTA+AGG - chr7.4:77075873-77075892 None:intergenic 40.0%
CAAATGCATACCTGAAAGAC+AGG - chr7.4:77075077-77075096 None:intergenic 40.0%
CAACAAAGTCACAACCTGAA+AGG - chr7.4:77076495-77076514 None:intergenic 40.0%
CAGTATAGCAGGTAGCAATA+TGG - chr7.4:77076040-77076059 None:intergenic 40.0%
CCATTTCAGCCATAAACATG+GGG + chr7.4:77076537-77076556 MS.gene74054:CDS 40.0%
CTTGGATGTTGTAATTGGCA+AGG - chr7.4:77077434-77077453 None:intergenic 40.0%
GAATGCAAAACATGGTTGCA+GGG + chr7.4:77076402-77076421 MS.gene74054:CDS 40.0%
GTAATCTGAGTGGCTAATAG+TGG + chr7.4:77075312-77075331 MS.gene74054:intron 40.0%
! CTGCAACCATGTTTTGCATT+CGG - chr7.4:77076403-77076422 None:intergenic 40.0%
! GCAGTCAATATTTGCTGCAT+TGG + chr7.4:77076703-77076722 MS.gene74054:CDS 40.0%
CAGATTACCCTCAAGATGTC+CGG - chr7.4:77075300-77075319 None:intergenic 45.0%
CATCTTGAGGGTAATCTGAG+TGG + chr7.4:77075302-77075321 MS.gene74054:intron 45.0%
CCATGTCCGAATGCAAAACA+TGG + chr7.4:77076394-77076413 MS.gene74054:CDS 45.0%
CCCCATGTTTATGGCTGAAA+TGG - chr7.4:77076540-77076559 None:intergenic 45.0%
CGAATGCAAAACATGGTTGC+AGG + chr7.4:77076401-77076420 MS.gene74054:CDS 45.0%
CTACCTGCTGTCCTAAACTT+AGG + chr7.4:77076290-77076309 MS.gene74054:CDS 45.0%
CTACTAAGCCGCATAAGATG+AGG - chr7.4:77075641-77075660 None:intergenic 45.0%
CTCATCTTATGCGGCTTAGT+AGG + chr7.4:77075639-77075658 MS.gene74054:intron 45.0%
GTCTGAACTCTTAACCCTCA+GGG - chr7.4:77077307-77077326 None:intergenic 45.0%
GTGCAACGTCTGATCTTTGA+TGG + chr7.4:77077384-77077403 MS.gene74054:CDS 45.0%
GTGTCTCTATAGGGACATCT+TGG - chr7.4:77075685-77075704 None:intergenic 45.0%
TAAGCCGCATAAGATGAGGA+GGG - chr7.4:77075637-77075656 None:intergenic 45.0%
TCTACGTAATCACCCAGACT+AGG + chr7.4:77077271-77077290 MS.gene74054:CDS 45.0%
TCTGAACTCTTAACCCTCAG+GGG - chr7.4:77077306-77077325 None:intergenic 45.0%
TGTCTGAACTCTTAACCCTC+AGG - chr7.4:77077308-77077327 None:intergenic 45.0%
TGTTGTAATTGGCAAGGGTC+AGG - chr7.4:77077428-77077447 None:intergenic 45.0%
TTTGCCCTCCTCATCTTATG+CGG + chr7.4:77075630-77075649 MS.gene74054:intron 45.0%
! CCATGTTTTGCATTCGGACA+TGG - chr7.4:77076397-77076416 None:intergenic 45.0%
! GCATTGGTCCTAACTCTTCT+GGG + chr7.4:77076719-77076738 MS.gene74054:CDS 45.0%
! GTTCCTAAGTTTAGGACAGC+AGG - chr7.4:77076296-77076315 None:intergenic 45.0%
! TGCATTGGTCCTAACTCTTC+TGG + chr7.4:77076718-77076737 MS.gene74054:CDS 45.0%
!! AAAGGAGATAGGAGGTACCA+TGG - chr7.4:77076911-77076930 None:intergenic 45.0%
!! AAGGAGATAGGAGGTACCAT+GGG - chr7.4:77076910-77076929 None:intergenic 45.0%
AAGATGTCCGGTTCTCGACA+TGG - chr7.4:77075288-77075307 None:intergenic 50.0%
AATAGTGGTGACCTGGTAGC+AGG + chr7.4:77075327-77075346 MS.gene74054:intron 50.0%
AGATGTCCGGTTCTCGACAT+GGG - chr7.4:77075287-77075306 None:intergenic 50.0%
AGTGGCTAATAGTGGTGACC+TGG + chr7.4:77075320-77075339 MS.gene74054:intron 50.0%
CCATGTTACTGTCCCCTTTC+AGG + chr7.4:77076478-77076497 MS.gene74054:CDS 50.0%
CCTGAAAGGGGACAGTAACA+TGG - chr7.4:77076481-77076500 None:intergenic 50.0%
CTAAGCCGCATAAGATGAGG+AGG - chr7.4:77075638-77075657 None:intergenic 50.0%
CTGAACTCTTAACCCTCAGG+GGG - chr7.4:77077305-77077324 None:intergenic 50.0%
GGGGATCATCTTCCTAGTCT+GGG - chr7.4:77077286-77077305 None:intergenic 50.0%
TACTCGGACCCAGAAGAGTT+AGG - chr7.4:77076730-77076749 None:intergenic 50.0%
TAGGAAGATGATCCCCCTGA+GGG + chr7.4:77077290-77077309 MS.gene74054:CDS 50.0%
TCGAGAACCGGACATCTTGA+GGG + chr7.4:77075290-77075309 MS.gene74054:intron 50.0%
!! TGACAAGGCAGAAGAGTACC+AGG + chr7.4:77077356-77077375 MS.gene74054:CDS 50.0%
CACAACCCCATGTCGAGAAC+CGG + chr7.4:77075278-77075297 MS.gene74054:intron 55.0%
CTAGGAAGATGATCCCCCTG+AGG + chr7.4:77077289-77077308 MS.gene74054:CDS 55.0%
GATGTCCGGTTCTCGACATG+GGG - chr7.4:77075286-77075305 None:intergenic 55.0%
GCGCACGACGTGAAACACAA+GGG + chr7.4:77075243-77075262 MS.gene74054:intron 55.0%
GGGGGATCATCTTCCTAGTC+TGG - chr7.4:77077287-77077306 None:intergenic 55.0%
GTCGAGAACCGGACATCTTG+AGG + chr7.4:77075289-77075308 MS.gene74054:intron 55.0%
! GGTGGAGGGTTGACTTCTCT+TGG - chr7.4:77077452-77077471 None:intergenic 55.0%
AGTGGTGACCTGGTAGCAGG+TGG + chr7.4:77075330-77075349 MS.gene74054:intron 60.0%
CGCGCACGACGTGAAACACA+AGG + chr7.4:77075242-77075261 MS.gene74054:intron 60.0%
TCAGACGTTGCACGTGCACC+TGG - chr7.4:77077377-77077396 None:intergenic 60.0%
!! GCAGGTGGCCCAACGGATTT+TGG + chr7.4:77075345-77075364 MS.gene74054:intron 60.0%
ACCTCGTCCGCCGCCTCATT+GGG + chr7.4:77077469-77077488 MS.gene74054:CDS 65.0%
CCTGGTAGCAGGTGGCCCAA+CGG + chr7.4:77075338-77075357 MS.gene74054:intron 65.0%
CAATGAGGCGGCGGACGAGG+TGG - chr7.4:77077470-77077489 None:intergenic 70.0%
CACCTCGTCCGCCGCCTCAT+TGG + chr7.4:77077468-77077487 MS.gene74054:CDS 70.0%
CCGTTGGGCCACCTGCTACC+AGG - chr7.4:77075341-77075360 None:intergenic 70.0%
CCTCGTCCGCCGCCTCATTG+GGG + chr7.4:77077470-77077489 MS.gene74054:CDS 70.0%
CCCCAATGAGGCGGCGGACG+AGG - chr7.4:77077473-77077492 None:intergenic 75.0%
GAGGCGGCGGACGAGGTGGA+GGG - chr7.4:77077466-77077485 None:intergenic 75.0%
TGAGGCGGCGGACGAGGTGG+AGG - chr7.4:77077467-77077486 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 77075005 77077497 77075005 ID=MS.gene74054
chr7.4 mRNA 77075005 77077497 77075005 ID=MS.gene74054.t1;Parent=MS.gene74054
chr7.4 exon 77075005 77075085 77075005 ID=MS.gene74054.t1.exon1;Parent=MS.gene74054.t1
chr7.4 CDS 77075005 77075085 77075005 ID=cds.MS.gene74054.t1;Parent=MS.gene74054.t1
chr7.4 exon 77076265 77076912 77076265 ID=MS.gene74054.t1.exon2;Parent=MS.gene74054.t1
chr7.4 CDS 77076265 77076912 77076265 ID=cds.MS.gene74054.t1;Parent=MS.gene74054.t1
chr7.4 exon 77077264 77077497 77077264 ID=MS.gene74054.t1.exon3;Parent=MS.gene74054.t1
chr7.4 CDS 77077264 77077497 77077264 ID=cds.MS.gene74054.t1;Parent=MS.gene74054.t1
Gene Sequence

>MS.gene74054

ATGGAGCCTCTGACGATTTCAAACTCTAAATTGCTTGATTGCTGCAATTGTTTTCAACCTCTAAGTATTCCTGTCTTTCAGGTATGCATTTGATTATATTAATTGTTTTCTACATGTGAGAAAATTTTATTTCTTGTCATATATATGCAATATGTATCTGGTCATTTAATTTAAATATTTAATACTCTTTTGTAGTATGTTTCAAACTTTATATTCAATAGTGTCTGCTATACAGTTCGCGCACGACGTGAAACACAAGGGTATGACTCTTAACACAACCCCATGTCGAGAACCGGACATCTTGAGGGTAATCTGAGTGGCTAATAGTGGTGACCTGGTAGCAGGTGGCCCAACGGATTTTGGATAAATTTTGATAATATCTTAGGATTTGTGTTGAACCTAACTCAACTTTACAAAACTGACTTGTAAGGTGAGAAATGCCCCAATTATATACTCATATTTAGGCTTTATTTCATTTAATGCAATTAACATAGAATTCACTTTAGAGGGTAAAGTAAGTATTATCAACTGTTAATTAGAAAATGCAGGATCGATATTGGAGTTACATCATTACAACCAAGAGTTTTTAAATTAGCGACACTTGATTTTCTCACTTTAAAGGAGATTTGCCCTCCTCATCTTATGCGGCTTAGTAGGAAACAGAAAAGAATGGAGAACCAAGATGTCCCTATAGAGACACAAAACAATTAGGGAGAAACAGAGATAGATGCATAACAAATGATGTCTAGTAGTGAAGAGCATGATCATGAATTCATGATGATGAGTAAGTGGTTAAAATAGAGATAGTGATACTATTTTACGAATCACTTTTATTTATTTTAATTGCTTAGATGTGTTTTTTAAGCCTTAGAGGCAAAGACTTGTTTGATTTACATTGGGTTTGAATATAAGTTACAATGATCTCTCATAAATAATGATGAATGTCTTTAATTTTGTATATCCTTCTATTTTTGAGCTTTTATATGGGTATGTTATGAACCTGTATTGTTTCTCTAAACTTTGGTATTGTGGCCATATTGCTACCTGCTATACTGCTATAGTATTTTGGGTGTCAGCTGTAATCCGTCTTTGAGTACATTGATTTTGAGAATAATAAATTAAGAATGATTAGCTTTATGTTTATTATACTTATGATTGCATAACTTGATAACAAGCTTTACAAAAAATCTCTTACTTTATTTGATTCTAGCAAATGGTTCAAAGTTTAATTTGATGGTTTTGTTTTTTGTTGTAATTCAGTGTAATAATGGTCATATTGTTTGCTCTACCTGCTGTCCTAAACTTAGGAACAAGTGTCAGAAGTGCTCGTTGCACATTAGCTCAAAACGTTGTAAAGCCATTGAGAATCTATTGCAATCTATCGAAATGCCATGTCCGAATGCAAAACATGGTTGCAGGGAGAAAATGAGTTACACTGGAAATAGGAAGCATGAAGAAGAATGCATCTATGTACCATGTTACTGTCCCCTTTCAGGTTGTGACTTTGTTGCAGCATCAGAACTGTTGTCCAACCATTTCAGCCATAAACATGGGGATTCTCAAATCAAATTTTCTTATGGTCACTCCTTCATTGTCTCTTTGAAGTCTAATGGTGAAACTGGTGAAACCATTGTTCTTCAAGAGGAAAATGACGGCAAACTATTTATTCTCAATAATAATACTATGAGTTTGGGAAATGCAGTCAATATTTGCTGCATTGGTCCTAACTCTTCTGGGTCCGAGTATAGTTATGATATATTGGCTAGGTCTGAAATATGCAAACTGAAATTACAGTCTTTTGCAAAGAATGTCCAACAGTTTACTTTAGCAACTCTTTCATCAGAGTTCCTTGTGATTCCTTTTCGTTCTTCTGAACCTCTCAAGCTAGAAATTTGCATAACACCCATGGTACCTCCTATCTCCTTTTCTCTGTTTTTTTTTTTTCTTCTTCCAATTAAAGTCTTATTATTTTCTTTTGTGTTTTGAATTTATACTCTAGCGTTTTATCTCAAATTCATCGGTTTTGCATATCCCAAAATAAGGTTGTTAGTCTTTTCTATTTTTGTATCAGTTCTTAAAATATCTGTCTCAATTTCTTAAATTGATTTTGATCATGAATTTCTTTTGCCCAGTTGTACCGTAATAAATTTTGCAAGGGGTTTTGCTTTCTATATGATGCTTTTATCATTGATTAATGTGTTGTCAATTGCGGTGCATATGCAAATATTCTTTTATTGATTTAATGGCAATGGTGTACAGATGCAAATCTACGTAATCACCCAGACTAGGAAGATGATCCCCCTGAGGGTTAAGAGTTCAGACACAATAGCCAATGTGAAGGAGATGATTTTTGACAAGGCAGAAGAGTACCAGGTGCACGTGCAACGTCTGATCTTTGATGGTAAGCAACTAGATGATAGCCTGACCCTTGCCAATTACAACATCCAAGAGAAGTCAACCCTCCACCTCGTCCGCCGCCTCATTGGGGACTAG

Protein sequence

>MS.gene74054.t1

MEPLTISNSKLLDCCNCFQPLSIPVFQCNNGHIVCSTCCPKLRNKCQKCSLHISSKRCKAIENLLQSIEMPCPNAKHGCREKMSYTGNRKHEEECIYVPCYCPLSGCDFVAASELLSNHFSHKHGDSQIKFSYGHSFIVSLKSNGETGETIVLQEENDGKLFILNNNTMSLGNAVNICCIGPNSSGSEYSYDILARSEICKLKLQSFAKNVQQFTLATLSSEFLVIPFRSSEPLKLEICITPMMQIYVITQTRKMIPLRVKSSDTIANVKEMIFDKAEEYQVHVQRLIFDGKQLDDSLTLANYNIQEKSTLHLVRRLIGD