AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92432


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92432.t1 MTR_5g076660 64.286 336 105 3 14 335 1 335 7.49e-145 413
MS.gene92432.t1 MTR_5g067400 63.548 310 112 1 26 335 2 310 1.04e-139 399
MS.gene92432.t1 MTR_1g046640 62.460 309 114 2 26 334 2 308 2.78e-135 388
MS.gene92432.t1 MTR_1g046650 62.460 309 114 2 26 334 2 308 6.19e-134 384
MS.gene92432.t1 MTR_1g046650 62.460 309 114 2 26 334 33 339 8.78e-134 385
MS.gene92432.t1 MTR_7g024290 62.379 311 115 2 26 335 2 311 2.14e-133 383
MS.gene92432.t1 MTR_2g038430 57.576 330 126 3 16 332 6 334 1.53e-127 369
MS.gene92432.t1 MTR_2g038420 60.312 320 121 3 21 335 11 329 4.14e-126 365
MS.gene92432.t1 MTR_7g094390 56.966 323 134 2 19 337 156 477 2.08e-123 363
MS.gene92432.t1 MTR_5g076370 56.667 330 138 3 10 335 8 336 4.38e-122 355
MS.gene92432.t1 MTR_1g046650 62.105 285 106 2 50 334 26 308 4.68e-119 347
MS.gene92432.t1 MTR_5g061290 55.140 321 133 6 22 335 5 321 1.19e-114 336
MS.gene92432.t1 MTR_5g076520 55.591 313 134 3 26 334 2 313 2.12e-112 330
MS.gene92432.t1 MTR_5g076810 61.567 268 101 2 73 339 2 268 3.08e-110 322
MS.gene92432.t1 MTR_5g076720 52.201 318 148 2 21 335 68 384 8.03e-107 318
MS.gene92432.t1 MTR_1g046650 61.826 241 90 2 94 334 1 239 3.01e-98 291
MS.gene92432.t1 MTR_5g076505 52.414 290 134 2 49 335 21 309 7.02e-98 293
MS.gene92432.t1 MTR_5g076820 56.890 283 113 6 17 294 2 280 4.03e-97 290
MS.gene92432.t1 MTR_5g076540 60.515 233 91 1 26 258 2 233 3.92e-90 270
MS.gene92432.t1 MTR_4g094468 42.586 263 139 5 8 262 66 324 5.15e-63 204
MS.gene92432.t1 MTR_5g077020 54.271 199 77 5 75 264 15 208 3.88e-59 190
MS.gene92432.t1 MTR_4g058025 63.636 121 42 2 105 224 14 133 1.51e-43 149
MS.gene92432.t1 MTR_7g085590 31.122 196 123 4 22 217 50 233 8.69e-26 105
MS.gene92432.t1 MTR_7g105080 58.571 70 29 0 266 335 1 70 1.22e-17 78.6
MS.gene92432.t1 MTR_3g092130 58.571 70 29 0 266 335 1 70 1.22e-17 78.6
MS.gene92432.t1 MTR_1g059690 58.571 70 29 0 266 335 1 70 1.22e-17 78.6
MS.gene92432.t1 MTR_5g092700 58.571 70 29 0 266 335 1 70 2.52e-17 78.6
MS.gene92432.t1 MTR_4g073580 58.571 70 29 0 266 335 1 70 2.52e-17 78.6
MS.gene92432.t1 MTR_8g088060 58.571 70 29 0 266 335 1 70 3.79e-17 78.2
MS.gene92432.t1 MTR_5g033960 58.571 70 29 0 266 335 1 70 4.63e-17 77.8
MS.gene92432.t1 MTR_4g073580 58.571 70 29 0 266 335 1 70 4.97e-17 78.6
MS.gene92432.t1 MTR_3g092130 58.571 70 29 0 266 335 1 70 5.83e-17 77.0
MS.gene92432.t1 MTR_7g116360 59.155 71 29 0 265 335 48 118 9.45e-17 79.7
MS.gene92432.t1 MTR_7g116360 53.750 80 37 0 256 335 115 194 3.02e-16 78.2
MS.gene92432.t1 MTR_7g116360 53.750 80 37 0 256 335 191 270 3.02e-16 78.2
MS.gene92432.t1 MTR_4g088485 53.750 80 37 0 256 335 128 207 1.37e-16 77.8
MS.gene92432.t1 MTR_4g088485 58.571 70 29 0 266 335 1 70 1.44e-16 77.8
MS.gene92432.t1 MTR_4g088495 60.000 70 28 0 266 335 1 70 1.45e-16 81.3
MS.gene92432.t1 MTR_4g088495 58.571 70 29 0 266 335 77 146 1.75e-15 78.2
MS.gene92432.t1 MTR_4g088495 58.571 70 29 0 266 335 153 222 1.75e-15 78.2
MS.gene92432.t1 MTR_4g088495 58.571 70 29 0 266 335 229 298 1.75e-15 78.2
MS.gene92432.t1 MTR_4g088495 58.571 70 29 0 266 335 305 374 1.75e-15 78.2
MS.gene92432.t1 MTR_4g088495 58.571 70 29 0 266 335 381 450 1.75e-15 78.2
MS.gene92432.t1 MTR_4g088495 58.571 70 29 0 266 335 457 526 1.75e-15 78.2
MS.gene92432.t1 MTR_4g088495 58.571 70 29 0 266 335 533 602 1.75e-15 78.2
MS.gene92432.t1 MTR_4g088495 58.571 70 29 0 266 335 609 678 1.75e-15 78.2
MS.gene92432.t1 MTR_4g088495 58.571 70 29 0 266 335 685 754 1.75e-15 78.2
MS.gene92432.t1 MTR_4g088495 58.571 70 29 0 266 335 761 830 1.75e-15 78.2
MS.gene92432.t1 MTR_4g080920 53.750 80 37 0 256 335 67 146 1.72e-16 78.2
MS.gene92432.t1 MTR_4g080920 57.143 70 30 0 266 335 1 70 1.87e-15 75.1
MS.gene92432.t1 MTR_4g080920 46.250 80 43 0 256 335 143 222 2.03e-11 63.5
MS.gene92432.t1 MTR_7g116360 58.571 70 29 0 266 335 1 70 1.81e-16 77.8
MS.gene92432.t1 MTR_7g116360 58.571 70 29 0 266 335 77 146 1.81e-16 77.8
MS.gene92432.t1 MTR_7g116360 58.571 70 29 0 266 335 153 222 1.81e-16 77.8
MS.gene92432.t1 MTR_1g066390 53.750 80 37 0 256 335 67 146 1.85e-16 78.2
MS.gene92432.t1 MTR_1g066390 53.750 80 37 0 256 335 143 222 1.85e-16 78.2
MS.gene92432.t1 MTR_1g066390 58.571 70 29 0 266 335 1 70 1.87e-16 78.2
MS.gene92432.t1 MTR_8g018230 53.750 80 37 0 256 335 67 146 3.41e-16 77.8
MS.gene92432.t1 MTR_8g018230 53.750 80 37 0 256 335 143 222 3.41e-16 77.8
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 1 70 3.61e-16 77.8
MS.gene92432.t1 MTR_6g061930 53.750 80 37 0 256 335 67 146 4.36e-16 77.8
MS.gene92432.t1 MTR_6g061930 53.750 80 37 0 256 335 204 283 4.36e-16 77.8
MS.gene92432.t1 MTR_6g061930 58.571 70 29 0 266 335 1 70 4.66e-16 77.8
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 1 70 5.02e-16 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 77 146 5.02e-16 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 153 222 5.02e-16 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 229 298 5.02e-16 78.2
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 305 374 5.66e-16 79.3
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 1 70 1.35e-15 78.2
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 77 146 1.35e-15 78.2
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 153 222 1.35e-15 78.2
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 229 298 1.35e-15 78.2
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 381 450 1.35e-15 78.2
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 457 526 1.35e-15 78.2
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 229 298 6.59e-16 78.6
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 1 70 9.23e-16 78.2
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 77 146 9.23e-16 78.2
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 153 222 9.23e-16 78.2
MS.gene92432.t1 MTR_4g091580 58.571 70 29 0 266 335 305 374 9.23e-16 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 1 70 6.64e-16 77.4
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 77 146 6.64e-16 77.4
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 153 222 6.64e-16 77.4
MS.gene92432.t1 MTR_8g081020 58.571 70 29 0 266 335 1 70 8.17e-16 78.2
MS.gene92432.t1 MTR_8g081020 58.571 70 29 0 266 335 77 146 8.17e-16 78.2
MS.gene92432.t1 MTR_8g081020 58.571 70 29 0 266 335 153 222 8.17e-16 78.2
MS.gene92432.t1 MTR_8g081020 58.571 70 29 0 266 335 229 298 8.17e-16 78.2
MS.gene92432.t1 MTR_8g081020 58.571 70 29 0 266 335 305 374 8.17e-16 78.2
MS.gene92432.t1 MTR_4g080797 58.571 70 29 0 266 335 1 70 9.06e-16 78.2
MS.gene92432.t1 MTR_4g080797 58.571 70 29 0 266 335 77 146 9.06e-16 78.2
MS.gene92432.t1 MTR_4g080797 58.571 70 29 0 266 335 153 222 9.06e-16 78.2
MS.gene92432.t1 MTR_4g080797 58.571 70 29 0 266 335 229 298 9.06e-16 78.2
MS.gene92432.t1 MTR_4g080797 58.571 70 29 0 266 335 305 374 9.06e-16 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 1 70 9.06e-16 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 77 146 9.06e-16 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 153 222 9.06e-16 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 229 298 9.06e-16 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 305 374 9.06e-16 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 1 70 9.40e-16 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 77 146 9.40e-16 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 153 222 9.40e-16 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 229 298 9.40e-16 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 305 374 9.40e-16 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 1 70 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 77 146 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 153 222 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 229 298 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 305 374 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 381 450 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 1 70 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 77 146 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 153 222 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 229 298 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 305 374 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 381 450 1.23e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 1 70 1.36e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 77 146 1.36e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 153 222 1.36e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 229 298 1.36e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 305 374 1.36e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 381 450 1.36e-15 78.2
MS.gene92432.t1 MTR_8g018230 58.571 70 29 0 266 335 457 526 1.36e-15 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 1 70 1.40e-15 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 77 146 1.40e-15 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 153 222 1.40e-15 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 229 298 1.40e-15 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 305 374 1.40e-15 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 381 450 1.40e-15 78.2
MS.gene92432.t1 MTR_4g081010 58.571 70 29 0 266 335 457 526 1.40e-15 78.2
MS.gene92432.t1 MTR_5g061310 50.000 70 35 0 266 335 2 71 3.22e-15 70.5
MS.gene92432.t1 MTR_8g027520 28.409 176 98 3 13 161 4 178 3.50e-15 75.9
MS.gene92432.t1 MTR_8g027520 32.540 126 84 1 36 161 45 169 5.02e-15 75.1
MS.gene92432.t1 MTR_3g091510 31.746 126 85 1 36 161 61 185 2.55e-14 73.2
MS.gene92432.t1 MTR_1g008120 30.952 126 86 1 36 161 69 193 2.35e-13 70.5
MS.gene92432.t1 MTR_7g117415 30.159 126 87 1 36 161 62 186 8.15e-13 68.9
MS.gene92432.t1 MTR_8g479250 55.000 80 36 0 256 335 131 210 1.47e-12 67.8
MS.gene92432.t1 MTR_8g038370 28.188 149 100 3 18 161 91 237 1.53e-12 68.2
MS.gene92432.t1 MTR_1g054335 31.897 116 77 1 36 149 59 174 2.54e-12 67.0
MS.gene92432.t1 MTR_3g017590 30.172 116 79 1 36 149 54 169 3.11e-12 67.0
MS.gene92432.t1 MTR_4g009980 46.269 67 32 1 275 337 5 71 1.30e-11 60.1
MS.gene92432.t1 MTR_7g093600 27.711 166 114 3 36 195 60 225 2.14e-11 64.3
MS.gene92432.t1 MTR_5g076740 47.761 67 34 1 265 330 85 151 2.51e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92432.t1 AT5G37930 35.887 248 155 2 28 272 103 349 4.84e-47 163
MS.gene92432.t1 AT1G66620 32.669 251 161 5 19 262 25 274 4.59e-39 141
MS.gene92432.t1 AT5G37890 33.333 225 147 2 27 248 40 264 1.30e-38 139
MS.gene92432.t1 AT5G37870 30.769 260 171 5 18 268 22 281 2.65e-36 133
MS.gene92432.t1 AT5G37910 29.119 261 174 4 13 262 9 269 8.53e-33 123
MS.gene92432.t1 AT1G66630 29.151 271 169 5 15 262 26 296 4.07e-31 119
MS.gene92432.t1 AT1G66650 33.600 250 154 7 27 265 75 323 3.91e-30 117
MS.gene92432.t1 AT5G62800 29.818 275 173 8 22 282 27 295 1.31e-29 116
MS.gene92432.t1 AT5G62800 33.166 199 128 3 22 215 27 225 1.37e-29 115
MS.gene92432.t1 AT1G66660 29.050 179 121 3 13 185 81 259 2.33e-23 99.4
MS.gene92432.t1 AT5G37900 26.054 261 151 5 13 263 7 235 1.72e-18 84.0
MS.gene92432.t1 AT1G65350 55.000 80 36 0 256 335 142 221 7.07e-18 83.6
MS.gene92432.t1 AT1G65350 58.571 70 29 0 266 335 1 70 6.94e-16 77.8
MS.gene92432.t1 AT1G65350 52.500 80 37 1 256 335 67 145 2.71e-13 70.1
MS.gene92432.t1 AT3G52590 58.571 70 29 0 266 335 1 70 1.56e-17 78.2
MS.gene92432.t1 AT2G36170 58.571 70 29 0 266 335 1 70 1.56e-17 78.2
MS.gene92432.t1 AT2G47110 58.571 70 29 0 266 335 1 70 3.44e-17 78.2
MS.gene92432.t1 AT2G47110 58.571 70 29 0 266 335 1 70 3.44e-17 78.2
MS.gene92432.t1 AT3G62250 58.571 70 29 0 266 335 1 70 3.84e-17 78.2
MS.gene92432.t1 AT4G05050 53.750 80 37 0 256 335 67 146 4.06e-17 77.8
MS.gene92432.t1 AT4G05050 58.571 70 29 0 266 335 1 70 4.23e-17 77.8
MS.gene92432.t1 AT4G05320 53.750 80 37 0 256 335 67 146 4.06e-17 77.8
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 1 70 4.23e-17 77.8
MS.gene92432.t1 AT1G23410 58.571 70 29 0 266 335 1 70 4.07e-17 78.2
MS.gene92432.t1 AT2G35635 58.571 70 29 0 266 335 1 70 4.12e-17 77.8
MS.gene92432.t1 AT1G31340 58.571 70 29 0 266 335 1 70 4.45e-17 77.8
MS.gene92432.t1 AT5G37640 54.321 81 37 0 255 335 68 148 1.08e-16 80.1
MS.gene92432.t1 AT5G37640 52.500 80 38 0 256 335 145 224 3.69e-14 72.8
MS.gene92432.t1 AT5G37640 53.086 81 35 2 256 335 223 301 2.15e-13 70.5
MS.gene92432.t1 AT4G05050 58.571 70 29 0 266 335 1 70 1.90e-16 77.8
MS.gene92432.t1 AT4G05050 58.571 70 29 0 266 335 77 146 1.90e-16 77.8
MS.gene92432.t1 AT4G05050 58.571 70 29 0 266 335 153 222 1.90e-16 77.8
MS.gene92432.t1 AT4G05050 58.571 70 29 0 266 335 1 70 1.90e-16 77.8
MS.gene92432.t1 AT4G05050 58.571 70 29 0 266 335 77 146 1.90e-16 77.8
MS.gene92432.t1 AT4G05050 58.571 70 29 0 266 335 153 222 1.90e-16 77.8
MS.gene92432.t1 AT4G05050 58.571 70 29 0 266 335 1 70 1.90e-16 77.8
MS.gene92432.t1 AT4G05050 58.571 70 29 0 266 335 77 146 1.90e-16 77.8
MS.gene92432.t1 AT4G05050 58.571 70 29 0 266 335 153 222 1.90e-16 77.8
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 1 70 1.90e-16 77.8
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 77 146 1.90e-16 77.8
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 153 222 1.90e-16 77.8
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 1 70 1.90e-16 77.8
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 77 146 1.90e-16 77.8
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 153 222 1.90e-16 77.8
MS.gene92432.t1 AT3G09790 53.750 80 37 0 256 335 69 148 3.36e-16 80.1
MS.gene92432.t1 AT3G09790 57.143 70 30 0 266 335 552 621 1.67e-14 75.1
MS.gene92432.t1 AT3G09790 51.429 70 34 0 266 335 3 72 1.70e-12 68.9
MS.gene92432.t1 AT3G09790 53.750 80 37 0 256 335 69 148 3.36e-16 80.1
MS.gene92432.t1 AT3G09790 57.143 70 30 0 266 335 552 621 1.67e-14 75.1
MS.gene92432.t1 AT3G09790 51.429 70 34 0 266 335 3 72 1.70e-12 68.9
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 1 70 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 77 146 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 153 222 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 229 298 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 1 70 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 77 146 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 153 222 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 229 298 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 1 70 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 77 146 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 153 222 4.97e-16 78.2
MS.gene92432.t1 AT5G03240 58.571 70 29 0 266 335 229 298 4.97e-16 78.2
MS.gene92432.t1 AT5G20620 58.571 70 29 0 266 335 1 70 4.97e-16 78.2
MS.gene92432.t1 AT5G20620 58.571 70 29 0 266 335 77 146 4.97e-16 78.2
MS.gene92432.t1 AT5G20620 58.571 70 29 0 266 335 153 222 4.97e-16 78.2
MS.gene92432.t1 AT5G20620 58.571 70 29 0 266 335 229 298 4.97e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 1 70 5.16e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 77 146 5.16e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 153 222 5.16e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 229 298 5.16e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 1 70 5.16e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 77 146 5.16e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 153 222 5.16e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 229 298 5.16e-16 78.2
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 1 70 5.16e-16 78.2
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 77 146 5.16e-16 78.2
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 153 222 5.16e-16 78.2
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 229 298 5.16e-16 78.2
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 1 70 5.16e-16 78.2
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 77 146 5.16e-16 78.2
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 153 222 5.16e-16 78.2
MS.gene92432.t1 AT4G02890 58.571 70 29 0 266 335 229 298 5.16e-16 78.2
MS.gene92432.t1 AT1G55060 57.143 70 30 0 266 335 77 146 6.64e-16 76.3
MS.gene92432.t1 AT1G55060 52.500 80 38 0 256 335 143 222 2.13e-15 75.1
MS.gene92432.t1 AT1G55060 52.857 70 33 0 266 335 1 70 5.67e-14 70.9
MS.gene92432.t1 AT1G66610 28.477 151 106 2 100 248 183 333 8.81e-16 78.2
MS.gene92432.t1 AT5G20620 58.571 70 29 0 266 335 1 70 9.10e-16 78.2
MS.gene92432.t1 AT5G20620 58.571 70 29 0 266 335 77 146 9.10e-16 78.2
MS.gene92432.t1 AT5G20620 58.571 70 29 0 266 335 153 222 9.10e-16 78.2
MS.gene92432.t1 AT5G20620 58.571 70 29 0 266 335 229 298 9.10e-16 78.2
MS.gene92432.t1 AT5G20620 58.571 70 29 0 266 335 305 374 9.10e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 1 70 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 77 146 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 153 222 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 229 298 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 305 374 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 1 70 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 77 146 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 153 222 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 229 298 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 305 374 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 1 70 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 77 146 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 153 222 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 229 298 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 305 374 9.49e-16 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 1 70 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 77 146 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 153 222 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 229 298 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 305 374 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 381 450 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 1 70 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 77 146 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 153 222 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 229 298 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 305 374 1.29e-15 78.2
MS.gene92432.t1 AT4G05320 58.571 70 29 0 266 335 381 450 1.29e-15 78.2
MS.gene92432.t1 AT1G53930 50.000 70 35 0 266 335 86 155 3.11e-14 70.1
MS.gene92432.t1 AT3G61790 30.159 126 87 1 36 161 61 185 1.03e-13 71.6
MS.gene92432.t1 AT4G27880 32.031 128 82 2 36 161 62 186 3.01e-13 70.1
MS.gene92432.t1 AT3G58040 27.778 126 90 1 36 161 58 182 4.65e-11 62.4
MS.gene92432.t1 AT3G58040 26.974 152 106 3 36 186 58 205 7.23e-11 62.8
MS.gene92432.t1 AT3G58040 26.974 152 106 3 36 186 58 205 7.23e-11 62.8

Find 78 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGCTACTATTATGATATTT+TGG 0.157177 8.4:+59885849 MS.gene92432:CDS
AGCAAAGTCACAACCTAAAA+TGG 0.183798 8.4:-59885602 None:intergenic
CCTTGTGCAAATGGCTAAAA+TGG 0.220076 8.4:-59885648 None:intergenic
AGGGGCTACCATATGAAAAT+TGG 0.296646 8.4:-59885681 None:intergenic
TGTATGATTTATCTAGCTAT+AGG 0.332023 8.4:-59886464 None:intergenic
GCCACCATTACACGGTGATT+TGG 0.340626 8.4:-59883996 None:intergenic
ACTGTTCTCTTGAAGAATAA+TGG 0.356172 8.4:-59885734 None:intergenic
CACCAGCATTATCTGTTCCT+TGG 0.374771 8.4:+59886337 MS.gene92432:CDS
GGCTTCATCATTAAACTTCA+AGG 0.396925 8.4:-59885713 None:intergenic
AAGGGATAATCTTTCCAGTC+AGG 0.403562 8.4:-59886243 None:intergenic
GTATGATTTATCTAGCTATA+GGG 0.406518 8.4:-59886463 None:intergenic
GGTAAAGGATGGACTTATCT+TGG 0.415625 8.4:-59886405 None:intergenic
CGAAAATTTGTGACAAGGAA+TGG 0.420270 8.4:+59886305 MS.gene92432:CDS
CTTGACTATCCCTGTGTTCG+AGG 0.421700 8.4:+59884103 MS.gene92432:CDS
GCAAAGTCACAACCTAAAAT+GGG 0.423707 8.4:-59885601 None:intergenic
AATTTCTAACTTGAGTAGTT+CGG 0.430490 8.4:-59885980 None:intergenic
AATGGCTCTGGATCGTTTCA+AGG 0.434530 8.4:-59885455 None:intergenic
TTCGAGAATCCTTGTGCAAA+TGG 0.437698 8.4:-59885657 None:intergenic
CATCTAGTTGCTTATTTCCA+AGG 0.440781 8.4:-59886354 None:intergenic
CAATAGATTCTCAATGGCTC+TGG 0.452098 8.4:-59885467 None:intergenic
TTCTTCAAGAGAACAGTGTT+GGG 0.454309 8.4:+59885740 MS.gene92432:CDS
TGGAAAGATTATCCCTTTGA+AGG 0.467459 8.4:+59886249 MS.gene92432:CDS
AAAATTGTGGAACTTTGCAC+TGG 0.469124 8.4:-59885887 None:intergenic
GCAGTCAATATTAGCTGCAT+TGG 0.470841 8.4:+59885805 MS.gene92432:CDS
AACTTCAAGGTGACAAAGAA+GGG 0.477193 8.4:-59885700 None:intergenic
GAGGGTCGCCGACGAGGTAA+AGG 0.477240 8.4:-59886420 None:intergenic
GTTCCCATGTTTAGAACAGC+AGG 0.480246 8.4:-59885404 None:intergenic
ATTCTTCAAGAGAACAGTGT+TGG 0.492231 8.4:+59885739 MS.gene92432:CDS
TCTGAACTCTCCACCTTCAA+AGG 0.496142 8.4:-59886262 None:intergenic
CCTAAAATGGGGCAGTAACA+TGG 0.498503 8.4:-59885589 None:intergenic
GAATAACTTATAGTGGAAAG+AGG 0.502573 8.4:+59885539 MS.gene92432:CDS
GTTGCAATTCAGTGTGATAA+TGG 0.502832 8.4:+59885364 MS.gene92432:intron
ATAGCCAAATCACCGTGTAA+TGG 0.503396 8.4:+59883992 MS.gene92432:intron
ATCTTCGTACAAACCCTGAC+TGG 0.506598 8.4:+59886229 MS.gene92432:CDS
GTAGCGTGGTTCAGAAGAGT+TGG 0.511055 8.4:-59885833 None:intergenic
AAGGAGAGAATAACTTATAG+TGG 0.516242 8.4:+59885532 MS.gene92432:CDS
AAACTTCAAGGTGACAAAGA+AGG 0.527821 8.4:-59885701 None:intergenic
GAGATGCATACCTCGAACAC+AGG 0.531758 8.4:-59884113 None:intergenic
AGGGATAATCTTTCCAGTCA+GGG 0.534012 8.4:-59886242 None:intergenic
TTGGATGTCGTAATCATCAA+TGG 0.545303 8.4:-59886386 None:intergenic
CTGAACTCTCCACCTTCAAA+GGG 0.545740 8.4:-59886261 None:intergenic
TTCCAAGGAACAGATAATGC+TGG 0.548367 8.4:-59886339 None:intergenic
TAGCGTGGTTCAGAAGAGTT+GGG 0.548704 8.4:-59885832 None:intergenic
TCTACCTGCTGTTCTAAACA+TGG 0.558526 8.4:+59885400 MS.gene92432:CDS
CATGATGAGGGTCGCCGACG+AGG 0.562993 8.4:-59886426 None:intergenic
AAATAATAGAACTGAGAGTG+TGG 0.568562 8.4:+59885777 MS.gene92432:CDS
GAGTGGTTGTCTTCATGATG+AGG 0.569206 8.4:-59886439 None:intergenic
GAAGGTGGAGAGTTCAGATA+CGG 0.573368 8.4:+59886267 MS.gene92432:CDS
AGAAGTCTCTTCACCGTCGT+TGG 0.575994 8.4:-59884024 None:intergenic
TTATCTAGCTATAGGGTGAG+TGG 0.581253 8.4:-59886456 None:intergenic
AGATTGCAATAGATTCTCAA+TGG 0.582302 8.4:-59885473 None:intergenic
GAATGTAAAACACGGTTGCA+AGG 0.585808 8.4:+59885513 MS.gene92432:CDS
TGGCATGTGCCACCATTACA+CGG 0.592013 8.4:-59884004 None:intergenic
AAAGATTATCCCTTTGAAGG+TGG 0.598975 8.4:+59886252 MS.gene92432:CDS
AATAATAGAACTGAGAGTGT+GGG 0.601725 8.4:+59885778 MS.gene92432:CDS
GAGTTTCTAAAGAAACTCGT+TGG 0.603280 8.4:-59885921 None:intergenic
GTCGCCGACGAGGTAAAGGA+TGG 0.603797 8.4:-59886416 None:intergenic
GCAATCAAACGCATGAGGGT+CGG 0.603929 8.4:-59884063 None:intergenic
TGCAGCAATCAAACGCATGA+GGG 0.606914 8.4:-59884067 None:intergenic
ATGCAGCAATCAAACGCATG+AGG 0.610999 8.4:-59884068 None:intergenic
GCCAAATCACCGTGTAATGG+TGG 0.619905 8.4:+59883995 MS.gene92432:intron
TCGAACACAGGGATAGTCAA+GGG 0.621594 8.4:-59884101 None:intergenic
AAGTCCATCCTTTACCTCGT+CGG 0.626464 8.4:+59886412 MS.gene92432:CDS
CTCGAACACAGGGATAGTCA+AGG 0.636040 8.4:-59884102 None:intergenic
CTACCTGCTGTTCTAAACAT+GGG 0.638267 8.4:+59885401 MS.gene92432:CDS
AGTGGTTGTCTTCATGATGA+GGG 0.639161 8.4:-59886438 None:intergenic
ACTTCAAGGTGACAAAGAAG+GGG 0.652282 8.4:-59885699 None:intergenic
TGTCGTAATCATCAATGGTG+AGG 0.657734 8.4:-59886381 None:intergenic
AAAATATCATAATAGTAGCG+TGG 0.660800 8.4:-59885847 None:intergenic
CGTAATCATCAATGGTGAGG+CGG 0.661754 8.4:-59886378 None:intergenic
AGATGCATACCTCGAACACA+GGG 0.664098 8.4:-59884112 None:intergenic
CAAAGTCACAACCTAAAATG+GGG 0.667460 8.4:-59885600 None:intergenic
GGTGGAGAGTTCAGATACGG+TGG 0.683257 8.4:+59886270 MS.gene92432:CDS
GAAAGCGAAAATTTGTGACA+AGG 0.683839 8.4:+59886300 MS.gene92432:CDS
CGTGGTTCAGAAGAGTTGGG+AGG 0.713627 8.4:-59885829 None:intergenic
AAAGGAGATAGATACCTTGG+GGG 0.746296 8.4:-59886010 None:intergenic
ATGGTGGCACATGCCAACGA+CGG 0.764785 8.4:+59884011 MS.gene92432:CDS
TCATGTCTGAATGTAAAACA+CGG 0.785850 8.4:+59885505 MS.gene92432:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATTAAAATTGAGT+TGG + chr8.4:59885238-59885257 MS.gene92432:intron 10.0%
!! ATATAATAATAAAGTTGTAA+TGG + chr8.4:59883921-59883940 MS.gene92432:intron 10.0%
!!! AATTATTATTTTTGTTATGA+GGG - chr8.4:59885188-59885207 None:intergenic 10.0%
!!! TAATTATTATTTTTGTTATG+AGG - chr8.4:59885189-59885208 None:intergenic 10.0%
!!! TTAATTTTTTTTCCTTAAAT+GGG - chr8.4:59885230-59885249 None:intergenic 10.0%
!!! TTTAATTTTTTTTCCTTAAA+TGG - chr8.4:59885231-59885250 None:intergenic 10.0%
!! AAAAACCAAATTGAATTAAA+AGG - chr8.4:59885960-59885979 None:intergenic 15.0%
!! AAGATACATTATATATATAC+CGG - chr8.4:59884792-59884811 None:intergenic 15.0%
!! ATATAATCAAAAACAAAAAG+AGG - chr8.4:59883905-59883924 None:intergenic 15.0%
!! ATTTATAAAGAAAACTTCAA+CGG - chr8.4:59884826-59884845 None:intergenic 15.0%
!! GAATTTCATATAAAATGATA+GGG - chr8.4:59886100-59886119 None:intergenic 15.0%
!! TATGTGTTGAAATATTATTT+AGG - chr8.4:59884546-59884565 None:intergenic 15.0%
!! TGAATTTCATATAAAATGAT+AGG - chr8.4:59886101-59886120 None:intergenic 15.0%
!! TTATTGAATATATGTGAAAA+TGG + chr8.4:59884449-59884468 MS.gene92432:intron 15.0%
!!! GAAGTTTTCTTTATAAATTA+AGG + chr8.4:59884828-59884847 MS.gene92432:intron 15.0%
!!! TTATTATTGATTAGTTTTGT+TGG + chr8.4:59886186-59886205 MS.gene92432:intron 15.0%
!! CAATAAATCAACTACTAAAT+AGG - chr8.4:59884967-59884986 None:intergenic 20.0%
!! CAGAAAAAAAAAACTAAAAC+AGG - chr8.4:59886156-59886175 None:intergenic 20.0%
!! TAAAAAACCAAATCATTTGA+CGG - chr8.4:59884854-59884873 None:intergenic 20.0%
!!! AAAGTGTTTTTTTACAACAA+AGG - chr8.4:59884495-59884514 None:intergenic 20.0%
!!! CTATTTAGTAGTTGATTTAT+TGG + chr8.4:59884965-59884984 MS.gene92432:intron 20.0%
!!! CTGTTTTAGTTTTTTTTTTC+TGG + chr8.4:59886154-59886173 MS.gene92432:intron 20.0%
!!! TAATTTGTTGTCATATTTTG+TGG + chr8.4:59884152-59884171 MS.gene92432:intron 20.0%
! AAAATATCATAATAGTAGCG+TGG - chr8.4:59885850-59885869 None:intergenic 25.0%
! AATCAAAAACAAAAAGAGGA+GGG - chr8.4:59883901-59883920 None:intergenic 25.0%
! AATTTCTAACTTGAGTAGTT+CGG - chr8.4:59885983-59886002 None:intergenic 25.0%
! ATGCTTACAAAAAGTCTATT+AGG + chr8.4:59884757-59884776 MS.gene92432:intron 25.0%
! GAAAATCATCAAGTTAGATT+TGG - chr8.4:59885338-59885357 None:intergenic 25.0%
! TAATCAAAAACAAAAAGAGG+AGG - chr8.4:59883902-59883921 None:intergenic 25.0%
! TTATTTAGTAGCAAACTTCT+TGG + chr8.4:59884915-59884934 MS.gene92432:intron 25.0%
!! AATAGACTTTTTGTAAGCAT+TGG - chr8.4:59884757-59884776 None:intergenic 25.0%
!! ACGCTACTATTATGATATTT+TGG + chr8.4:59885849-59885868 MS.gene92432:CDS 25.0%
!! ATAGACTTTTTGTAAGCATT+GGG - chr8.4:59884756-59884775 None:intergenic 25.0%
!! ATATATCCTTGTTATCAAAC+AGG - chr8.4:59884698-59884717 None:intergenic 25.0%
!! TATACTCCTTTCATATTTTG+AGG + chr8.4:59884186-59884205 MS.gene92432:intron 25.0%
!! TTTTTCCCTCAAAATATGAA+AGG - chr8.4:59884195-59884214 None:intergenic 25.0%
!!! ACTATTATGATATTTTGGCT+AGG + chr8.4:59885854-59885873 MS.gene92432:CDS 25.0%
!!! ATACTCCTTTCATATTTTGA+GGG + chr8.4:59884187-59884206 MS.gene92432:intron 25.0%
!!! ATTAGTTTTGTTGGTAATTG+TGG + chr8.4:59886195-59886214 MS.gene92432:intron 25.0%
!!! ATTTTTTTTCCTTAAATGGG+AGG - chr8.4:59885227-59885246 None:intergenic 25.0%
!!! GAGTTCCTTTTAATTCAATT+TGG + chr8.4:59885952-59885971 MS.gene92432:CDS 25.0%
!!! TACCAAACCTTTAAAATTGT+CGG + chr8.4:59885026-59885045 MS.gene92432:intron 25.0%
!!! TGAATACTTATTTTACACGA+GGG - chr8.4:59885001-59885020 None:intergenic 25.0%
AAATAATAGAACTGAGAGTG+TGG + chr8.4:59885777-59885796 MS.gene92432:CDS 30.0%
AACACATAGCAATGATATTG+TGG + chr8.4:59884558-59884577 MS.gene92432:intron 30.0%
AACATTAATCCTCCCATTTA+AGG + chr8.4:59885215-59885234 MS.gene92432:intron 30.0%
AAGGAGAGAATAACTTATAG+TGG + chr8.4:59885532-59885551 MS.gene92432:CDS 30.0%
ACATTATATATATACCGGTC+TGG - chr8.4:59884787-59884806 None:intergenic 30.0%
ACTGTTCTCTTGAAGAATAA+TGG - chr8.4:59885737-59885756 None:intergenic 30.0%
AGATTGCAATAGATTCTCAA+TGG - chr8.4:59885476-59885495 None:intergenic 30.0%
ATAGCAATGATATTGTGGTT+TGG + chr8.4:59884563-59884582 MS.gene92432:intron 30.0%
ATCAAAAACAAAAAGAGGAG+GGG - chr8.4:59883900-59883919 None:intergenic 30.0%
GTTCAAAAAGATGTTCAAAG+AGG + chr8.4:59883869-59883888 MS.gene92432:CDS 30.0%
TCATGTCTGAATGTAAAACA+CGG + chr8.4:59885505-59885524 MS.gene92432:CDS 30.0%
TGATAGGGTTAAAATTCGAA+AGG - chr8.4:59886085-59886104 None:intergenic 30.0%
TTAATTGAGAAGAACAAGTG+AGG - chr8.4:59886042-59886061 None:intergenic 30.0%
! AATAATAGAACTGAGAGTGT+GGG + chr8.4:59885778-59885797 MS.gene92432:CDS 30.0%
! ATTTAAAGCCTAATCCAACT+CGG + chr8.4:59884672-59884691 MS.gene92432:intron 30.0%
! GAATAACTTATAGTGGAAAG+AGG + chr8.4:59885539-59885558 MS.gene92432:CDS 30.0%
! TCTCGAATCCAATTTTCATA+TGG + chr8.4:59885673-59885692 MS.gene92432:CDS 30.0%
! TGGTTATACATTTTACTGCA+TGG + chr8.4:59885258-59885277 MS.gene92432:intron 30.0%
!! AGTTGGATTAGGCTTTAAAT+AGG - chr8.4:59884672-59884691 None:intergenic 30.0%
!! ATTAGGCTTTAAATAGGTCA+TGG - chr8.4:59884666-59884685 None:intergenic 30.0%
!! TTCCGACAATTTTAAAGGTT+TGG - chr8.4:59885031-59885050 None:intergenic 30.0%
!!! CTGAATACTTATTTTACACG+AGG - chr8.4:59885002-59885021 None:intergenic 30.0%
!!! CTGTCATAGACTTGTTTTTA+AGG - chr8.4:59885058-59885077 None:intergenic 30.0%
!!! TGATTTGGTTTTTTAGTCGA+AGG + chr8.4:59884859-59884878 MS.gene92432:intron 30.0%
AAAATTGTGGAACTTTGCAC+TGG - chr8.4:59885890-59885909 None:intergenic 35.0%
AAACTTCAAGGTGACAAAGA+AGG - chr8.4:59885704-59885723 None:intergenic 35.0%
AACTTCAAGGTGACAAAGAA+GGG - chr8.4:59885703-59885722 None:intergenic 35.0%
ACAAGTCTATGACAGACAAT+AGG + chr8.4:59885063-59885082 MS.gene92432:intron 35.0%
AGCAAAGTCACAACCTAAAA+TGG - chr8.4:59885605-59885624 None:intergenic 35.0%
AGTAAAGGAGATAGATACCT+TGG - chr8.4:59886016-59886035 None:intergenic 35.0%
ATTAAGGCCGTCAAATGATT+TGG + chr8.4:59884844-59884863 MS.gene92432:intron 35.0%
ATTCTTCAAGAGAACAGTGT+TGG + chr8.4:59885739-59885758 MS.gene92432:CDS 35.0%
CAAAGTCACAACCTAAAATG+GGG - chr8.4:59885603-59885622 None:intergenic 35.0%
CATCTAGTTGCTTATTTCCA+AGG - chr8.4:59886357-59886376 None:intergenic 35.0%
CGAAAATTTGTGACAAGGAA+TGG + chr8.4:59886305-59886324 MS.gene92432:CDS 35.0%
GAAAGCGAAAATTTGTGACA+AGG + chr8.4:59886300-59886319 MS.gene92432:CDS 35.0%
GAACAAGTGAGGTAAAGTAA+AGG - chr8.4:59886031-59886050 None:intergenic 35.0%
GCAAAGTCACAACCTAAAAT+GGG - chr8.4:59885604-59885623 None:intergenic 35.0%
GGACATTCTTCGAAAAATTG+TGG - chr8.4:59885903-59885922 None:intergenic 35.0%
GGCTTCATCATTAAACTTCA+AGG - chr8.4:59885716-59885735 None:intergenic 35.0%
GTAAAGGAGATAGATACCTT+GGG - chr8.4:59886015-59886034 None:intergenic 35.0%
GTTGCAATTCAGTGTGATAA+TGG + chr8.4:59885364-59885383 MS.gene92432:intron 35.0%
TAAAGGAGATAGATACCTTG+GGG - chr8.4:59886014-59886033 None:intergenic 35.0%
TGGAAAGATTATCCCTTTGA+AGG + chr8.4:59886249-59886268 MS.gene92432:CDS 35.0%
TGTTAGATAACTCACAACCT+TGG + chr8.4:59884320-59884339 MS.gene92432:intron 35.0%
TTCTTCAAGAGAACAGTGTT+GGG + chr8.4:59885740-59885759 MS.gene92432:CDS 35.0%
TTGGATGTCGTAATCATCAA+TGG - chr8.4:59886389-59886408 None:intergenic 35.0%
! AAAGATTATCCCTTTGAAGG+TGG + chr8.4:59886252-59886271 MS.gene92432:CDS 35.0%
! CTTTTACACCCCTATTGATA+CGG + chr8.4:59885156-59885175 MS.gene92432:intron 35.0%
! GAACTTTGCACTGGATTTTT+GGG - chr8.4:59885881-59885900 None:intergenic 35.0%
! GAGTTTCTAAAGAAACTCGT+TGG - chr8.4:59885924-59885943 None:intergenic 35.0%
! GCATGTTCCGACAATTTTAA+AGG - chr8.4:59885036-59885055 None:intergenic 35.0%
!! CATGTTTAAGAGTATCGCAA+AGG - chr8.4:59884357-59884376 None:intergenic 35.0%
!! GTTGATTTATTGGTGTTGCT+AGG + chr8.4:59884975-59884994 MS.gene92432:intron 35.0%
AAAGGAGATAGATACCTTGG+GGG - chr8.4:59886013-59886032 None:intergenic 40.0%
AAGGGATAATCTTTCCAGTC+AGG - chr8.4:59886246-59886265 None:intergenic 40.0%
ACTTCAAGGTGACAAAGAAG+GGG - chr8.4:59885702-59885721 None:intergenic 40.0%
AGAAATTTGCATAACCCCCA+AGG + chr8.4:59885996-59886015 MS.gene92432:CDS 40.0%
AGAAGACCTAATCACACCAA+CGG - chr8.4:59884885-59884904 None:intergenic 40.0%
AGAATGAGTGCGGAACATAT+AGG + chr8.4:59884587-59884606 MS.gene92432:intron 40.0%
AGGGATAATCTTTCCAGTCA+GGG - chr8.4:59886245-59886264 None:intergenic 40.0%
AGGGGCTACCATATGAAAAT+TGG - chr8.4:59885684-59885703 None:intergenic 40.0%
AGTGGTTGTCTTCATGATGA+GGG - chr8.4:59886441-59886460 None:intergenic 40.0%
ATAGCCAAATCACCGTGTAA+TGG + chr8.4:59883992-59884011 MS.gene92432:intron 40.0%
CAAAGGCGAAAAAATCACCA+AGG - chr8.4:59884340-59884359 None:intergenic 40.0%
CAATAGATTCTCAATGGCTC+TGG - chr8.4:59885470-59885489 None:intergenic 40.0%
CCTTGTGCAAATGGCTAAAA+TGG - chr8.4:59885651-59885670 None:intergenic 40.0%
CTTTGTAGTAGGTCAGACTT+AGG + chr8.4:59885106-59885125 MS.gene92432:intron 40.0%
GAATGAGTGCGGAACATATA+GGG + chr8.4:59884588-59884607 MS.gene92432:intron 40.0%
GAATGTAAAACACGGTTGCA+AGG + chr8.4:59885513-59885532 MS.gene92432:CDS 40.0%
GCAGTCAATATTAGCTGCAT+TGG + chr8.4:59885805-59885824 MS.gene92432:CDS 40.0%
TATATATATACCGGTCTGGC+AGG - chr8.4:59884783-59884802 None:intergenic 40.0%
TGACCTACTACAAAGACTAC+AGG - chr8.4:59885101-59885120 None:intergenic 40.0%
TGGTGTGATTAGGTCTTCTT+AGG + chr8.4:59884886-59884905 MS.gene92432:intron 40.0%
TGTCGTAATCATCAATGGTG+AGG - chr8.4:59886384-59886403 None:intergenic 40.0%
TTCCAAGGAACAGATAATGC+TGG - chr8.4:59886342-59886361 None:intergenic 40.0%
TTCGAGAATCCTTGTGCAAA+TGG - chr8.4:59885660-59885679 None:intergenic 40.0%
! AATAGGGGTGTAAAAGGATC+AGG - chr8.4:59885152-59885171 None:intergenic 40.0%
! ACAAATTTTCGCTTTCACGC+TGG - chr8.4:59886296-59886315 None:intergenic 40.0%
! ATTTGTTCGATTCGATCCCA+TGG + chr8.4:59884245-59884264 MS.gene92432:intron 40.0%
! CGTATCAATAGGGGTGTAAA+AGG - chr8.4:59885158-59885177 None:intergenic 40.0%
! CTACCTGCTGTTCTAAACAT+GGG + chr8.4:59885401-59885420 MS.gene92432:CDS 40.0%
! GACTTAGGCTTTATAAAGCC+TGG + chr8.4:59885121-59885140 MS.gene92432:intron 40.0%
! GGAACTTTGCACTGGATTTT+TGG - chr8.4:59885882-59885901 None:intergenic 40.0%
! GGTAAAGGATGGACTTATCT+TGG - chr8.4:59886408-59886427 None:intergenic 40.0%
! TCTACCTGCTGTTCTAAACA+TGG + chr8.4:59885400-59885419 MS.gene92432:CDS 40.0%
! TTTGTTCGATTCGATCCCAT+GGG + chr8.4:59884246-59884265 MS.gene92432:intron 40.0%
!! CCATTTTAGCCATTTGCACA+AGG + chr8.4:59885648-59885667 MS.gene92432:CDS 40.0%
!! GTATGAGTATCGAGACACAT+AGG - chr8.4:59884285-59884304 None:intergenic 40.0%
AAGTCCATCCTTTACCTCGT+CGG + chr8.4:59886412-59886431 MS.gene92432:CDS 45.0%
AGATGCATACCTCGAACACA+GGG - chr8.4:59884115-59884134 None:intergenic 45.0%
AGGCCTGTAGTCTTTGTAGT+AGG + chr8.4:59885095-59885114 MS.gene92432:intron 45.0%
ATCTTCGTACAAACCCTGAC+TGG + chr8.4:59886229-59886248 MS.gene92432:CDS 45.0%
ATGCAGCAATCAAACGCATG+AGG - chr8.4:59884071-59884090 None:intergenic 45.0%
CACCAGCATTATCTGTTCCT+TGG + chr8.4:59886337-59886356 MS.gene92432:CDS 45.0%
CCTAAAATGGGGCAGTAACA+TGG - chr8.4:59885592-59885611 None:intergenic 45.0%
CGTAATCATCAATGGTGAGG+CGG - chr8.4:59886381-59886400 None:intergenic 45.0%
CTGAACTCTCCACCTTCAAA+GGG - chr8.4:59886264-59886283 None:intergenic 45.0%
GAAGGTGGAGAGTTCAGATA+CGG + chr8.4:59886267-59886286 MS.gene92432:CDS 45.0%
GAGTGGTTGTCTTCATGATG+AGG - chr8.4:59886442-59886461 None:intergenic 45.0%
GTATCGAGACACATAGGCTA+AGG - chr8.4:59884279-59884298 None:intergenic 45.0%
TAGCGTGGTTCAGAAGAGTT+GGG - chr8.4:59885835-59885854 None:intergenic 45.0%
TCGAACACAGGGATAGTCAA+GGG - chr8.4:59884104-59884123 None:intergenic 45.0%
TCTGAACTCTCCACCTTCAA+AGG - chr8.4:59886265-59886284 None:intergenic 45.0%
TGCAGCAATCAAACGCATGA+GGG - chr8.4:59884070-59884089 None:intergenic 45.0%
TGTTATCAAACAGGCCGAGT+TGG - chr8.4:59884689-59884708 None:intergenic 45.0%
! ACTCGGCCTGTTTGATAACA+AGG + chr8.4:59884689-59884708 MS.gene92432:intron 45.0%
! AGGCTTTATAAAGCCTGGTC+CGG + chr8.4:59885126-59885145 MS.gene92432:intron 45.0%
! CCATGTTACTGCCCCATTTT+AGG + chr8.4:59885589-59885608 MS.gene92432:CDS 45.0%
! GTTCCCATGTTTAGAACAGC+AGG - chr8.4:59885407-59885426 None:intergenic 45.0%
!! AATGGCTCTGGATCGTTTCA+AGG - chr8.4:59885458-59885477 None:intergenic 45.0%
!! GTGGTTTGGTAGAATGAGTG+CGG + chr8.4:59884577-59884596 MS.gene92432:intron 45.0%
!!! GTTTTTTAGTCGAAGGCCGT+TGG + chr8.4:59884866-59884885 MS.gene92432:intron 45.0%
AACATGCTGACCTCTCGTAG+AGG + chr8.4:59884634-59884653 MS.gene92432:intron 50.0%
AGAAGTCTCTTCACCGTCGT+TGG - chr8.4:59884027-59884046 None:intergenic 50.0%
AGGGAGAGCTCCGTATCAAT+AGG - chr8.4:59885169-59885188 None:intergenic 50.0%
CAGACAATAGGCTAGACTCG+AGG + chr8.4:59885075-59885094 MS.gene92432:intron 50.0%
CTCGAACACAGGGATAGTCA+AGG - chr8.4:59884105-59884124 None:intergenic 50.0%
CTTGACTATCCCTGTGTTCG+AGG + chr8.4:59884103-59884122 MS.gene92432:CDS 50.0%
GAGATGCATACCTCGAACAC+AGG - chr8.4:59884116-59884135 None:intergenic 50.0%
GCAATCAAACGCATGAGGGT+CGG - chr8.4:59884066-59884085 None:intergenic 50.0%
GCCAAATCACCGTGTAATGG+TGG + chr8.4:59883995-59884014 MS.gene92432:intron 50.0%
GCCACCATTACACGGTGATT+TGG - chr8.4:59883999-59884018 None:intergenic 50.0%
GGAGAGCTCCGTATCAATAG+GGG - chr8.4:59885167-59885186 None:intergenic 50.0%
GGGAGAGCTCCGTATCAATA+GGG - chr8.4:59885168-59885187 None:intergenic 50.0%
GTAGCGTGGTTCAGAAGAGT+TGG - chr8.4:59885836-59885855 None:intergenic 50.0%
TGGCATGTGCCACCATTACA+CGG - chr8.4:59884007-59884026 None:intergenic 50.0%
! CAAACAGGCCGAGTTGGATT+AGG - chr8.4:59884683-59884702 None:intergenic 50.0%
! TTCGATTCGATCCCATGGGT+GGG + chr8.4:59884250-59884269 MS.gene92432:intron 50.0%
ATGGTGGCACATGCCAACGA+CGG + chr8.4:59884011-59884030 MS.gene92432:CDS 55.0%
CGAAGGCCGTTGGTGTGATT+AGG + chr8.4:59884876-59884895 MS.gene92432:intron 55.0%
CGTGGTTCAGAAGAGTTGGG+AGG - chr8.4:59885832-59885851 None:intergenic 55.0%
GGGGTGTAAAAGGATCAGGC+CGG - chr8.4:59885148-59885167 None:intergenic 55.0%
GGTGGAGAGTTCAGATACGG+TGG + chr8.4:59886270-59886289 MS.gene92432:CDS 55.0%
GTCTATTAGGCCTGCCAGAC+CGG + chr8.4:59884770-59884789 MS.gene92432:intron 55.0%
TAAAAGGATCAGGCCGGACC+AGG - chr8.4:59885142-59885161 None:intergenic 55.0%
! GTTCGATTCGATCCCATGGG+TGG + chr8.4:59884249-59884268 MS.gene92432:intron 55.0%
!! ATGGTGTCGACCTCTACGAG+AGG - chr8.4:59884647-59884666 None:intergenic 55.0%
AGGCTAAGGCTACCCACCCA+TGG - chr8.4:59884265-59884284 None:intergenic 60.0%
GGCTAAGGCTACCCACCCAT+GGG - chr8.4:59884264-59884283 None:intergenic 60.0%
GTCGCCGACGAGGTAAAGGA+TGG - chr8.4:59886419-59886438 None:intergenic 60.0%
CATGATGAGGGTCGCCGACG+AGG - chr8.4:59886429-59886448 None:intergenic 65.0%
GAGGGTCGCCGACGAGGTAA+AGG - chr8.4:59886423-59886442 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 59883867 59886474 59883867 ID=MS.gene92432
chr8.4 mRNA 59883867 59886474 59883867 ID=MS.gene92432.t1;Parent=MS.gene92432
chr8.4 exon 59883867 59883890 59883867 ID=MS.gene92432.t1.exon1;Parent=MS.gene92432.t1
chr8.4 CDS 59883867 59883890 59883867 ID=cds.MS.gene92432.t1;Parent=MS.gene92432.t1
chr8.4 exon 59883996 59884124 59883996 ID=MS.gene92432.t1.exon2;Parent=MS.gene92432.t1
chr8.4 CDS 59883996 59884124 59883996 ID=cds.MS.gene92432.t1;Parent=MS.gene92432.t1
chr8.4 exon 59885376 59886017 59885376 ID=MS.gene92432.t1.exon3;Parent=MS.gene92432.t1
chr8.4 CDS 59885376 59886017 59885376 ID=cds.MS.gene92432.t1;Parent=MS.gene92432.t1
chr8.4 exon 59886223 59886474 59886223 ID=MS.gene92432.t1.exon4;Parent=MS.gene92432.t1
chr8.4 CDS 59886223 59886474 59886223 ID=cds.MS.gene92432.t1;Parent=MS.gene92432.t1
Gene Sequence

>MS.gene92432

ATGTTCAAAAAGATGTTCAAAGAGGTATTACCCCTCCTCTTTTTGTTTTTGATTATATAATAATAAAGTTGTAATGGTGTAATGTAGTTGTCTATAATACTTTTTTTTTTCTTAATATCAATTTTATAGCCAAATCACCGTGTAATGGTGGCACATGCCAACGACGGTGAAGAGACTTCTGATTCTTTGATGATTTCCGACCCTCATGCGTTTGATTGCTGCATTTGTTTTGCACCCTTGACTATCCCTGTGTTCGAGGTATGCATCTCAATTGTTAATCAATATTAATTTGTTGTCATATTTTGTGGTGATTGATTGTTATACTCCTTTCATATTTTGAGGGAAAAAACTTGAGAATCATGTAGAATGATTAAATTTATTTGTTCGATTCGATCCCATGGGTGGGTAGCCTTAGCCTATGTGTCTCGATACTCATACATACGCTACAACACATGTTAGATAACTCACAACCTTGGTGATTTTTTCGCCTTTGCGATACTCTTAAACATGTTTAGTTTTCTAAACTCAAAAAGCTGAATTTAAATTTCTGATTGAAATGAGTACAATTCACGTGTATTTTTGTTATTGAATATATGTGAAAATGGTAACAATAAGATTTAAAAGACCTTTGTTGTAAAAAAACACTTTTAAACACATTATTATATGATGTACTTTTCCTAAATAATATTTCAACACATAGCAATGATATTGTGGTTTGGTAGAATGAGTGCGGAACATATAGGGTTTAAGTGATAAGTACGCACAGAAACATGCTGACCTCTCGTAGAGGTCGACACCATGACCTATTTAAAGCCTAATCCAACTCGGCCTGTTTGATAACAAGGATATATGCTTTTTGTAAAGTCTATTTAATTAAATAGACATGCCCAATGCTTACAAAAAGTCTATTAGGCCTGCCAGACCGGTATATATATAATGTATCTTTCACTTTGCTACCGTTGAAGTTTTCTTTATAAATTAAGGCCGTCAAATGATTTGGTTTTTTAGTCGAAGGCCGTTGGTGTGATTAGGTCTTCTTAGGATATGATTATTTAGTAGCAAACTTCTTGGTGTGTTTAGATCTTCATAAGATTTGACCTATTTAGTAGTTGATTTATTGGTGTTGCTAGGCCCTCGTGTAAAATAAGTATTCAGACTTTACCAAACCTTTAAAATTGTCGGAACATGCCTTAAAAACAAGTCTATGACAGACAATAGGCTAGACTCGAGGCCTGTAGTCTTTGTAGTAGGTCAGACTTAGGCTTTATAAAGCCTGGTCCGGCCTGATCCTTTTACACCCCTATTGATACGGAGCTCTCCCTCATAACAAAAATAATAATTAACAACTAACATTAATCCTCCCATTTAAGGAAAAAAAATTAAAATTGAGTTGGTTATACATTTTACTGCATGGCTTGCTATTGCAAGAAAATCTCTATTTTAATTAATTTTATTCTAGCAAATGTTTCCAAATCTAACTTGATGATTTTCTTGTATGTTGCAATTCAGTGTGATAATGGTCATGTTGTTTGCTCTACCTGCTGTTCTAAACATGGGAACAGATGTCAAAAATGTTTTACATGCATTACCTTGAAACGATCCAGAGCCATTGAGAATCTATTGCAATCTATCAAAATGTCATGTCTGAATGTAAAACACGGTTGCAAGGAGAGAATAACTTATAGTGGAAAGAGGAAGCATGAAGAAGAATGCATCTATGTGCCATGTTACTGCCCCATTTTAGGTTGTGACTTTGCTGCGTCATCTAAAGTGTTATCTAACCATTTTAGCCATTTGCACAAGGATTCTCGAATCCAATTTTCATATGGTAGCCCCTTCTTTGTCACCTTGAAGTTTAATGATGAAGCCATTATTCTTCAAGAGAACAGTGTTGGGAAATTGTTCATTCTAAATAATAGAACTGAGAGTGTGGGAAATGCAGTCAATATTAGCTGCATTGGTCCTCCCAACTCTTCTGAACCACGCTACTATTATGATATTTTGGCTAGGTCCCAAAAATCCAGTGCAAAGTTCCACAATTTTTCGAAGAATGTCCAACGAGTTTCTTTAGAAACTCTTTCATCAGAGTTCCTTTTAATTCAATTTGGTTTTTCCGAACTACTCAAGTTAGAAATTTGCATAACCCCCAAGGTATCTATCTCCTTTACTTTACCTCACTTGTTCTTCTCAATTAAAGTCTTGATATTTTCTTTTTCCTTTCGAATTTTAACCCTATCATTTTATATGAAATTCATTCGTTTTTTCAAATAACTAAAATGATTGTAACCTGTTTTAGTTTTTTTTTTCTGGTGTTATTTATTATTATTGATTAGTTTTGTTGGTAATTGTGGTGTAGATGCAAATCTTCGTACAAACCCTGACTGGAAAGATTATCCCTTTGAAGGTGGAGAGTTCAGATACGGTGGCCAGCGTGAAAGCGAAAATTTGTGACAAGGAATGGTTCATATTGCACCAGCATTATCTGTTCCTTGGAAATAAGCAACTAGATGACCGCCTCACCATTGATGATTACGACATCCAAGATAAGTCCATCCTTTACCTCGTCGGCGACCCTCATCATGAAGACAACCACTCACCCTATAGCTAG

Protein sequence

>MS.gene92432.t1

MFKKMFKEPNHRVMVAHANDGEETSDSLMISDPHAFDCCICFAPLTIPVFECDNGHVVCSTCCSKHGNRCQKCFTCITLKRSRAIENLLQSIKMSCLNVKHGCKERITYSGKRKHEEECIYVPCYCPILGCDFAASSKVLSNHFSHLHKDSRIQFSYGSPFFVTLKFNDEAIILQENSVGKLFILNNRTESVGNAVNISCIGPPNSSEPRYYYDILARSQKSSAKFHNFSKNVQRVSLETLSSEFLLIQFGFSELLKLEICITPKMQIFVQTLTGKIIPLKVESSDTVASVKAKICDKEWFILHQHYLFLGNKQLDDRLTIDDYDIQDKSILYLVGDPHHEDNHSPYS