Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53616.t1 | KEH41205.1 | 80.4 | 316 | 61 | 1 | 1 | 316 | 1 | 315 | 4.70E-141 | 510.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53616.t1 | Q84K34 | 38.0 | 242 | 142 | 5 | 3 | 237 | 100 | 340 | 1.3e-38 | 161.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53616.t1 | A0A072VSV1 | 80.4 | 316 | 61 | 1 | 1 | 316 | 1 | 315 | 3.4e-141 | 510.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53616.t1 | MTR_1g046640 | 80.380 | 316 | 61 | 1 | 1 | 316 | 1 | 315 | 0.0 | 505 |
MS.gene53616.t1 | MTR_1g046650 | 78.481 | 316 | 67 | 1 | 1 | 316 | 32 | 346 | 1.56e-176 | 492 |
MS.gene53616.t1 | MTR_1g046650 | 78.481 | 316 | 67 | 1 | 1 | 316 | 1 | 315 | 2.08e-176 | 490 |
MS.gene53616.t1 | MTR_5g067400 | 77.636 | 313 | 68 | 2 | 1 | 312 | 1 | 312 | 7.62e-173 | 481 |
MS.gene53616.t1 | MTR_1g046650 | 78.007 | 291 | 63 | 1 | 26 | 316 | 26 | 315 | 1.48e-159 | 448 |
MS.gene53616.t1 | MTR_7g024290 | 71.656 | 314 | 86 | 3 | 1 | 312 | 1 | 313 | 3.56e-156 | 439 |
MS.gene53616.t1 | MTR_5g076660 | 67.208 | 308 | 96 | 3 | 4 | 307 | 26 | 332 | 9.77e-138 | 394 |
MS.gene53616.t1 | MTR_5g076720 | 64.557 | 316 | 107 | 3 | 3 | 314 | 74 | 388 | 3.61e-137 | 394 |
MS.gene53616.t1 | MTR_5g076520 | 65.015 | 323 | 105 | 5 | 1 | 316 | 1 | 322 | 6.71e-137 | 390 |
MS.gene53616.t1 | MTR_5g076370 | 64.968 | 314 | 104 | 4 | 4 | 312 | 26 | 338 | 5.14e-135 | 387 |
MS.gene53616.t1 | MTR_5g076810 | 74.812 | 266 | 64 | 3 | 49 | 312 | 2 | 266 | 8.25e-134 | 381 |
MS.gene53616.t1 | MTR_7g094390 | 64.379 | 306 | 107 | 2 | 3 | 307 | 164 | 468 | 9.47e-132 | 383 |
MS.gene53616.t1 | MTR_2g038430 | 59.816 | 326 | 118 | 3 | 4 | 316 | 18 | 343 | 6.08e-131 | 376 |
MS.gene53616.t1 | MTR_1g046650 | 76.113 | 247 | 58 | 1 | 70 | 316 | 1 | 246 | 9.43e-131 | 372 |
MS.gene53616.t1 | MTR_2g038420 | 60.377 | 318 | 121 | 3 | 4 | 316 | 18 | 335 | 8.64e-130 | 373 |
MS.gene53616.t1 | MTR_5g061290 | 59.688 | 320 | 119 | 5 | 4 | 316 | 11 | 327 | 1.38e-126 | 365 |
MS.gene53616.t1 | MTR_5g076820 | 68.100 | 279 | 81 | 6 | 1 | 274 | 10 | 285 | 4.55e-120 | 347 |
MS.gene53616.t1 | MTR_5g076505 | 63.103 | 290 | 102 | 3 | 27 | 312 | 23 | 311 | 4.55e-119 | 345 |
MS.gene53616.t1 | MTR_5g076540 | 72.052 | 229 | 62 | 2 | 1 | 228 | 1 | 228 | 1.01e-108 | 316 |
MS.gene53616.t1 | MTR_5g077020 | 65.482 | 197 | 53 | 6 | 53 | 239 | 17 | 208 | 1.30e-74 | 229 |
MS.gene53616.t1 | MTR_4g094468 | 48.101 | 237 | 116 | 5 | 5 | 237 | 91 | 324 | 3.19e-64 | 206 |
MS.gene53616.t1 | MTR_4g058025 | 69.767 | 129 | 36 | 3 | 68 | 194 | 1 | 128 | 6.88e-50 | 164 |
MS.gene53616.t1 | MTR_7g085590 | 28.846 | 208 | 131 | 5 | 6 | 208 | 58 | 253 | 6.89e-23 | 96.7 |
MS.gene53616.t1 | MTR_3g091510 | 29.167 | 216 | 129 | 7 | 11 | 209 | 60 | 268 | 2.93e-18 | 84.3 |
MS.gene53616.t1 | MTR_7g117415 | 27.650 | 217 | 147 | 5 | 3 | 209 | 53 | 269 | 5.16e-18 | 83.6 |
MS.gene53616.t1 | MTR_8g027520 | 28.571 | 217 | 145 | 5 | 3 | 209 | 36 | 252 | 6.64e-18 | 82.8 |
MS.gene53616.t1 | MTR_8g027520 | 28.571 | 217 | 145 | 5 | 3 | 209 | 45 | 261 | 6.94e-18 | 83.2 |
MS.gene53616.t1 | MTR_1g008120 | 27.778 | 216 | 132 | 7 | 11 | 209 | 68 | 276 | 5.57e-17 | 80.5 |
MS.gene53616.t1 | MTR_5g092700 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 8.36e-17 | 76.6 |
MS.gene53616.t1 | MTR_4g073580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 8.36e-17 | 76.6 |
MS.gene53616.t1 | MTR_7g105080 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.39e-16 | 75.1 |
MS.gene53616.t1 | MTR_3g092130 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.39e-16 | 75.1 |
MS.gene53616.t1 | MTR_1g059690 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.39e-16 | 75.1 |
MS.gene53616.t1 | MTR_4g073580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.13e-16 | 76.3 |
MS.gene53616.t1 | MTR_8g088060 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.53e-16 | 75.1 |
MS.gene53616.t1 | MTR_3g092130 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.57e-16 | 74.3 |
MS.gene53616.t1 | MTR_7g116360 | 56.164 | 73 | 32 | 0 | 240 | 312 | 48 | 120 | 3.81e-16 | 77.4 |
MS.gene53616.t1 | MTR_7g116360 | 55.556 | 72 | 32 | 0 | 241 | 312 | 125 | 196 | 1.46e-15 | 75.9 |
MS.gene53616.t1 | MTR_7g116360 | 55.556 | 72 | 32 | 0 | 241 | 312 | 201 | 272 | 1.46e-15 | 75.9 |
MS.gene53616.t1 | MTR_5g033960 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.83e-16 | 74.7 |
MS.gene53616.t1 | MTR_4g088485 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.01e-16 | 76.3 |
MS.gene53616.t1 | MTR_4g088485 | 55.556 | 72 | 32 | 0 | 241 | 312 | 138 | 209 | 4.01e-16 | 76.3 |
MS.gene53616.t1 | MTR_1g066390 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.37e-16 | 76.6 |
MS.gene53616.t1 | MTR_1g066390 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 4.37e-16 | 76.6 |
MS.gene53616.t1 | MTR_1g066390 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 4.37e-16 | 76.6 |
MS.gene53616.t1 | MTR_7g116360 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.75e-16 | 76.3 |
MS.gene53616.t1 | MTR_7g116360 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 4.75e-16 | 76.3 |
MS.gene53616.t1 | MTR_7g116360 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 4.75e-16 | 76.3 |
MS.gene53616.t1 | MTR_5g076760 | 63.158 | 57 | 21 | 0 | 251 | 307 | 5 | 61 | 5.54e-16 | 72.4 |
MS.gene53616.t1 | MTR_1g054335 | 25.703 | 249 | 166 | 8 | 11 | 241 | 58 | 305 | 6.92e-16 | 77.0 |
MS.gene53616.t1 | MTR_8g038370 | 26.728 | 217 | 135 | 7 | 11 | 210 | 112 | 321 | 7.70e-16 | 77.8 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 8.63e-16 | 76.3 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 8.63e-16 | 76.3 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 8.63e-16 | 76.3 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.26e-15 | 76.3 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.26e-15 | 76.3 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.26e-15 | 76.3 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.26e-15 | 76.3 |
MS.gene53616.t1 | MTR_6g061930 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.26e-15 | 76.3 |
MS.gene53616.t1 | MTR_6g061930 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.26e-15 | 76.3 |
MS.gene53616.t1 | MTR_6g061930 | 55.556 | 72 | 32 | 0 | 241 | 312 | 214 | 285 | 1.26e-15 | 76.3 |
MS.gene53616.t1 | MTR_7g093600 | 26.794 | 209 | 143 | 6 | 11 | 209 | 59 | 267 | 1.27e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.70e-15 | 75.5 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.70e-15 | 75.5 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.70e-15 | 75.5 |
MS.gene53616.t1 | MTR_4g080920 | 54.167 | 72 | 33 | 0 | 241 | 312 | 77 | 148 | 1.71e-15 | 74.7 |
MS.gene53616.t1 | MTR_4g080920 | 54.167 | 72 | 33 | 0 | 241 | 312 | 1 | 72 | 3.43e-15 | 73.9 |
MS.gene53616.t1 | MTR_8g081020 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.96e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g081020 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.96e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g081020 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.96e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g081020 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.96e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g081020 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 1.96e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g080797 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g080797 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g080797 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g080797 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g080797 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 54.167 | 72 | 33 | 0 | 241 | 312 | 229 | 300 | 6.30e-15 | 75.1 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 1.98e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.04e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.04e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.04e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.04e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.04e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 2.57e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.08e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 3.08e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 3.08e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 3.08e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 3.08e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 457 | 528 | 3.08e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g091580 | 54.167 | 72 | 33 | 0 | 241 | 312 | 305 | 376 | 3.20e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.11e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 3.11e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 3.11e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 3.11e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 3.11e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 3.11e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 457 | 528 | 3.11e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.14e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 3.14e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 3.14e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 3.14e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 3.14e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 3.14e-15 | 76.6 |
MS.gene53616.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 457 | 528 | 3.14e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 3.80e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 3.80e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 3.80e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 3.80e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 3.80e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 457 | 528 | 3.80e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 533 | 604 | 3.80e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 609 | 680 | 3.80e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 685 | 756 | 3.80e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 761 | 832 | 3.80e-15 | 76.6 |
MS.gene53616.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.32e-15 | 76.3 |
MS.gene53616.t1 | MTR_3g017590 | 25.463 | 216 | 137 | 7 | 11 | 209 | 53 | 261 | 4.39e-15 | 74.7 |
MS.gene53616.t1 | MTR_5g076740 | 58.824 | 68 | 27 | 1 | 240 | 306 | 85 | 152 | 7.77e-15 | 71.6 |
MS.gene53616.t1 | MTR_4g009980 | 51.515 | 66 | 32 | 0 | 247 | 312 | 2 | 67 | 1.67e-14 | 67.8 |
MS.gene53616.t1 | MTR_8g479250 | 52.439 | 82 | 39 | 0 | 231 | 312 | 131 | 212 | 6.72e-14 | 71.2 |
MS.gene53616.t1 | MTR_5g061310 | 48.684 | 76 | 39 | 0 | 241 | 316 | 2 | 77 | 7.59e-14 | 66.2 |
MS.gene53616.t1 | MTR_5g076780 | 60.000 | 50 | 20 | 0 | 252 | 301 | 1 | 50 | 1.49e-12 | 62.4 |
MS.gene53616.t1 | MTR_5g076350 | 52.941 | 68 | 31 | 1 | 241 | 307 | 8 | 75 | 2.29e-12 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53616.t1 | AT5G37930 | 37.349 | 249 | 149 | 5 | 4 | 247 | 103 | 349 | 1.06e-45 | 158 |
MS.gene53616.t1 | AT1G66620 | 33.333 | 234 | 149 | 3 | 11 | 237 | 41 | 274 | 5.16e-39 | 140 |
MS.gene53616.t1 | AT5G37870 | 33.333 | 225 | 145 | 4 | 5 | 224 | 36 | 260 | 3.12e-36 | 132 |
MS.gene53616.t1 | AT5G37890 | 35.841 | 226 | 137 | 7 | 5 | 224 | 42 | 265 | 3.99e-34 | 126 |
MS.gene53616.t1 | AT1G66650 | 32.530 | 249 | 155 | 7 | 4 | 240 | 76 | 323 | 4.72e-32 | 122 |
MS.gene53616.t1 | AT1G66630 | 32.031 | 256 | 140 | 8 | 11 | 237 | 46 | 296 | 3.57e-30 | 116 |
MS.gene53616.t1 | AT1G66660 | 31.154 | 260 | 143 | 8 | 2 | 238 | 94 | 340 | 6.92e-30 | 116 |
MS.gene53616.t1 | AT5G37910 | 30.870 | 230 | 139 | 5 | 11 | 221 | 35 | 263 | 1.50e-29 | 114 |
MS.gene53616.t1 | AT5G62800 | 36.559 | 186 | 112 | 4 | 11 | 190 | 40 | 225 | 3.44e-29 | 114 |
MS.gene53616.t1 | AT5G62800 | 36.559 | 186 | 112 | 4 | 11 | 190 | 40 | 225 | 4.46e-29 | 114 |
MS.gene53616.t1 | AT3G61790 | 27.679 | 224 | 138 | 7 | 3 | 209 | 52 | 268 | 5.51e-17 | 80.5 |
MS.gene53616.t1 | AT4G27880 | 27.778 | 216 | 132 | 7 | 11 | 209 | 61 | 269 | 8.76e-17 | 80.1 |
MS.gene53616.t1 | AT2G35635 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.05e-16 | 76.3 |
MS.gene53616.t1 | AT1G31340 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.17e-16 | 76.3 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.22e-16 | 76.3 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.22e-16 | 76.3 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.22e-16 | 76.3 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.22e-16 | 76.3 |
MS.gene53616.t1 | AT3G52590 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.65e-16 | 75.1 |
MS.gene53616.t1 | AT2G36170 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.65e-16 | 75.1 |
MS.gene53616.t1 | AT3G62250 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.43e-16 | 75.5 |
MS.gene53616.t1 | AT2G47110 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.51e-16 | 75.5 |
MS.gene53616.t1 | AT2G47110 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.51e-16 | 75.5 |
MS.gene53616.t1 | AT1G23410 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.94e-16 | 75.1 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 4.98e-16 | 76.3 |
MS.gene53616.t1 | AT2G41980 | 25.403 | 248 | 168 | 8 | 11 | 241 | 54 | 301 | 1.17e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.19e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.28e-15 | 76.3 |
MS.gene53616.t1 | AT1G65350 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.82e-15 | 76.3 |
MS.gene53616.t1 | AT1G65350 | 55.556 | 72 | 32 | 0 | 241 | 312 | 152 | 223 | 6.03e-15 | 74.7 |
MS.gene53616.t1 | AT1G65350 | 54.167 | 72 | 32 | 1 | 241 | 312 | 77 | 147 | 8.57e-13 | 68.6 |
MS.gene53616.t1 | AT1G55060 | 54.167 | 72 | 33 | 0 | 241 | 312 | 77 | 148 | 1.86e-15 | 74.7 |
MS.gene53616.t1 | AT1G55060 | 52.778 | 72 | 34 | 0 | 241 | 312 | 1 | 72 | 1.72e-14 | 72.0 |
MS.gene53616.t1 | AT1G55060 | 52.778 | 72 | 34 | 0 | 241 | 312 | 153 | 224 | 1.19e-13 | 69.7 |
MS.gene53616.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.03e-15 | 76.6 |
MS.gene53616.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.03e-15 | 76.6 |
MS.gene53616.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.03e-15 | 76.6 |
MS.gene53616.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.03e-15 | 76.6 |
MS.gene53616.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.03e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.08e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 2.69e-15 | 76.6 |
MS.gene53616.t1 | AT5G37640 | 50.000 | 82 | 41 | 0 | 231 | 312 | 69 | 150 | 5.41e-15 | 74.7 |
MS.gene53616.t1 | AT5G37640 | 51.389 | 72 | 35 | 0 | 241 | 312 | 155 | 226 | 3.38e-13 | 69.7 |
MS.gene53616.t1 | AT5G37640 | 50.685 | 73 | 35 | 1 | 241 | 312 | 231 | 303 | 1.51e-11 | 64.7 |
MS.gene53616.t1 | AT3G58040 | 25.000 | 248 | 169 | 8 | 11 | 241 | 57 | 304 | 9.71e-15 | 73.9 |
MS.gene53616.t1 | AT3G58040 | 25.000 | 248 | 169 | 8 | 11 | 241 | 57 | 304 | 9.71e-15 | 73.9 |
MS.gene53616.t1 | AT1G66610 | 52.381 | 63 | 30 | 0 | 11 | 73 | 53 | 115 | 1.26e-14 | 74.3 |
MS.gene53616.t1 | AT1G66610 | 28.289 | 152 | 106 | 3 | 76 | 224 | 183 | 334 | 6.73e-13 | 68.9 |
MS.gene53616.t1 | AT1G53930 | 51.389 | 72 | 35 | 0 | 241 | 312 | 86 | 157 | 1.76e-14 | 70.5 |
MS.gene53616.t1 | AT1G66610 | 52.381 | 63 | 30 | 0 | 11 | 73 | 53 | 115 | 2.64e-14 | 71.6 |
MS.gene53616.t1 | AT1G66610 | 47.887 | 71 | 37 | 0 | 6 | 76 | 153 | 223 | 1.34e-13 | 69.7 |
MS.gene53616.t1 | AT3G58040 | 30.075 | 133 | 89 | 3 | 11 | 139 | 57 | 189 | 1.63e-13 | 68.9 |
MS.gene53616.t1 | AT1G66660 | 27.751 | 209 | 115 | 8 | 53 | 238 | 21 | 216 | 4.14e-13 | 68.2 |
MS.gene53616.t1 | AT3G09790 | 50.000 | 72 | 36 | 0 | 241 | 312 | 552 | 623 | 1.23e-12 | 68.9 |
MS.gene53616.t1 | AT3G09790 | 51.389 | 72 | 35 | 0 | 241 | 312 | 79 | 150 | 1.50e-12 | 68.6 |
MS.gene53616.t1 | AT3G09790 | 50.000 | 72 | 36 | 0 | 241 | 312 | 3 | 74 | 5.42e-12 | 67.0 |
MS.gene53616.t1 | AT3G09790 | 46.753 | 77 | 36 | 1 | 241 | 312 | 238 | 314 | 7.25e-12 | 66.6 |
MS.gene53616.t1 | AT3G09790 | 50.000 | 72 | 36 | 0 | 241 | 312 | 552 | 623 | 1.23e-12 | 68.9 |
MS.gene53616.t1 | AT3G09790 | 51.389 | 72 | 35 | 0 | 241 | 312 | 79 | 150 | 1.50e-12 | 68.6 |
MS.gene53616.t1 | AT3G09790 | 50.000 | 72 | 36 | 0 | 241 | 312 | 3 | 74 | 5.42e-12 | 67.0 |
MS.gene53616.t1 | AT3G09790 | 46.753 | 77 | 36 | 1 | 241 | 312 | 238 | 314 | 7.25e-12 | 66.6 |
Find 80 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAACTATTCCCATCTTTC+AGG | 0.143964 | 1.2:+29389409 | MS.gene53616:CDS |
GGAGGTACAACTTTCCTTTA+TGG | 0.197138 | 1.2:-29391490 | None:intergenic |
AGACATGAACATGGGGATTC+TGG | 0.269176 | 1.2:+29390894 | MS.gene53616:CDS |
GAGGTACAACTTTCCTTTAT+GGG | 0.330163 | 1.2:-29391489 | None:intergenic |
CTGAAAGATGGGAATAGTTA+AGG | 0.340707 | 1.2:-29389408 | None:intergenic |
CGCCACAGACCAGCCATTGC+TGG | 0.342437 | 1.2:-29391586 | None:intergenic |
ATTGTTCTTCAAGGGGAAAA+TGG | 0.346489 | 1.2:+29390975 | MS.gene53616:CDS |
GGAACTCGTTGGACGTTCTT+CGG | 0.366157 | 1.2:-29391149 | None:intergenic |
TCGTCTGCCACCGCCACCTT+TGG | 0.372646 | 1.2:+29391672 | MS.gene53616:CDS |
AGAAAATAAGTTACACTGAT+AGG | 0.383704 | 1.2:+29390778 | MS.gene53616:CDS |
ACCAGCCATTGCTGGTGCAC+TGG | 0.399473 | 1.2:-29391578 | None:intergenic |
GAGTTGCTTGTGATTCCATT+TGG | 0.402141 | 1.2:+29391191 | MS.gene53616:CDS |
TTGCAGCAATCAAGCAAACT+AGG | 0.409814 | 1.2:-29389374 | None:intergenic |
GGTTTCATCATTAGACTTCA+AGG | 0.410456 | 1.2:-29390952 | None:intergenic |
CAGGTATAGTTATGATATAT+TGG | 0.416141 | 1.2:+29391088 | MS.gene53616:CDS |
CCCCATGTTCATGTCTGAAA+TGG | 0.418427 | 1.2:-29390887 | None:intergenic |
GTTCCTGAGTTTAGTGCAAC+AGG | 0.418850 | 1.2:-29390646 | None:intergenic |
GATGAAACCATTGTTCTTCA+AGG | 0.438126 | 1.2:+29390966 | MS.gene53616:CDS |
TGAAAGATGGGAATAGTTAA+GGG | 0.442999 | 1.2:-29389407 | None:intergenic |
TACCTGGACTCGGAAGAATT+AGG | 0.444350 | 1.2:-29391071 | None:intergenic |
TGTTGTAGTCGGCAAGGGTC+AGG | 0.451067 | 1.2:-29391628 | None:intergenic |
GTCCTAATTCTTCCGAGTCC+AGG | 0.459130 | 1.2:+29391069 | MS.gene53616:CDS |
GCAGTCAATCTTTGCTGCAT+TGG | 0.459248 | 1.2:+29391047 | MS.gene53616:CDS |
ATCTTCATAAAGTCCCATAA+AGG | 0.465883 | 1.2:+29391476 | MS.gene53616:CDS |
TGAAATGCATACCTGAAAGA+TGG | 0.465935 | 1.2:-29389420 | None:intergenic |
CCAGCCATTGCTGGTGCACT+GGG | 0.475042 | 1.2:-29391577 | None:intergenic |
ATGAAACCATTGTTCTTCAA+GGG | 0.487345 | 1.2:+29390967 | MS.gene53616:CDS |
AGCAAAGTCACATCCTGAAA+GGG | 0.487737 | 1.2:-29390841 | None:intergenic |
AATACGTTGCAGTGTGATAA+TGG | 0.494945 | 1.2:+29390606 | MS.gene53616:intron |
CTCGGATGTTGTAGTCGGCA+AGG | 0.499897 | 1.2:-29391634 | None:intergenic |
CCCAGTGCACCAGCAATGGC+TGG | 0.509192 | 1.2:+29391577 | MS.gene53616:CDS |
TGTCTGAACGCTCAACCCTC+AGG | 0.509977 | 1.2:-29391511 | None:intergenic |
CAATATATCATAACTATACC+TGG | 0.513501 | 1.2:-29391087 | None:intergenic |
CGAAGATGGTTGACCCCTCT+CGG | 0.520693 | 1.2:-29391652 | None:intergenic |
AGGGTCAGGTTGTCCTGTAG+TGG | 0.524923 | 1.2:-29391614 | None:intergenic |
AGAGGGTCAGAGGAACCAAA+TGG | 0.528144 | 1.2:-29391206 | None:intergenic |
GCAATCAAGCAAACTAGGGT+TGG | 0.530572 | 1.2:-29389369 | None:intergenic |
GCAAAGTCACATCCTGAAAG+GGG | 0.530762 | 1.2:-29390840 | None:intergenic |
GAAATGCATACCTGAAAGAT+GGG | 0.530956 | 1.2:-29389419 | None:intergenic |
TCTAATTCCAAAGGTGGCGG+TGG | 0.539115 | 1.2:-29391679 | None:intergenic |
CTGTGGCGCTAAGCCACTAC+AGG | 0.540076 | 1.2:+29391601 | MS.gene53616:CDS |
CAGCAAAGTCACATCCTGAA+AGG | 0.549420 | 1.2:-29390842 | None:intergenic |
TCTGATGAAAGAGTTGCTAA+AGG | 0.550142 | 1.2:-29391170 | None:intergenic |
GTGGCGGTGGCAGACGAAGA+TGG | 0.550475 | 1.2:-29391666 | None:intergenic |
ATATCCCAGTGCACCAGCAA+TGG | 0.553195 | 1.2:+29391573 | MS.gene53616:CDS |
ATGCAAATATCTAGCTTGAG+AGG | 0.554871 | 1.2:-29391224 | None:intergenic |
TCGGATGTTGTAGTCGGCAA+GGG | 0.556014 | 1.2:-29391633 | None:intergenic |
ATGTGACTTTGCTGCATCAG+AGG | 0.561657 | 1.2:+29390851 | MS.gene53616:CDS |
CCCCTCTCGGATGTTGTAGT+CGG | 0.565673 | 1.2:-29391639 | None:intergenic |
TGCAGCAATCAAGCAAACTA+GGG | 0.574861 | 1.2:-29389373 | None:intergenic |
ATCTAGCTTGAGAGGGTCAG+AGG | 0.576385 | 1.2:-29391216 | None:intergenic |
TGAAACCATTGTTCTTCAAG+GGG | 0.583182 | 1.2:+29390968 | MS.gene53616:CDS |
AAATGCAAAACATGGTTGCA+AGG | 0.587331 | 1.2:+29390755 | MS.gene53616:CDS |
AAGGAAAGTTGTACCTCCTG+AGG | 0.588179 | 1.2:+29391495 | MS.gene53616:CDS |
CACCAGCAATGGCTGGTCTG+TGG | 0.597250 | 1.2:+29391584 | MS.gene53616:CDS |
TGGTGATAATCTAATTCCAA+AGG | 0.599905 | 1.2:-29391688 | None:intergenic |
ATAGTTATGATATATTGGCT+AGG | 0.603327 | 1.2:+29391093 | MS.gene53616:CDS |
TGCAAATATCTAGCTTGAGA+GGG | 0.605717 | 1.2:-29391223 | None:intergenic |
GACCATTTCAGACATGAACA+TGG | 0.605812 | 1.2:+29390885 | MS.gene53616:CDS |
ACCATTTCAGACATGAACAT+GGG | 0.607412 | 1.2:+29390886 | MS.gene53616:CDS |
AGACTTCAAGGAGACAATGA+AGG | 0.608582 | 1.2:-29390940 | None:intergenic |
GCCGACTACAACATCCGAGA+GGG | 0.611255 | 1.2:+29391638 | MS.gene53616:CDS |
GACAATGAAGGAGTGGCCAT+AGG | 0.611353 | 1.2:-29390928 | None:intergenic |
AGGAAAGTTGTACCTCCTGA+GGG | 0.617887 | 1.2:+29391496 | MS.gene53616:CDS |
ATGTTCATGTCTGAAATGGT+CGG | 0.618581 | 1.2:-29390883 | None:intergenic |
CTACCTGTTGCACTAAACTC+AGG | 0.619523 | 1.2:+29390643 | MS.gene53616:CDS |
TAATCTAATTCCAAAGGTGG+CGG | 0.621304 | 1.2:-29391682 | None:intergenic |
GTTCTTCAAGGGGAAAATGG+TGG | 0.626652 | 1.2:+29390978 | MS.gene53616:CDS |
ATCATAACTATACCTGGACT+CGG | 0.629309 | 1.2:-29391081 | None:intergenic |
TGATAATCTAATTCCAAAGG+TGG | 0.637981 | 1.2:-29391685 | None:intergenic |
TCAAGGAGACAATGAAGGAG+TGG | 0.639097 | 1.2:-29390935 | None:intergenic |
CTAGGGTTGGAGATCATCAA+CGG | 0.655898 | 1.2:-29389356 | None:intergenic |
CCATTTCAGACATGAACATG+GGG | 0.669952 | 1.2:+29390887 | MS.gene53616:CDS |
CAAAGTCACATCCTGAAAGG+GGG | 0.676119 | 1.2:-29390839 | None:intergenic |
TCATGTCCAAATGCAAAACA+TGG | 0.681945 | 1.2:+29390747 | MS.gene53616:CDS |
CTGAACGCTCAACCCTCAGG+AGG | 0.686466 | 1.2:-29391508 | None:intergenic |
GAGTTGCTAAAGGAACTCGT+TGG | 0.700460 | 1.2:-29391160 | None:intergenic |
GGAAATAGGAGGTACCTTGG+GGG | 0.715093 | 1.2:-29391249 | None:intergenic |
CCGACTACAACATCCGAGAG+GGG | 0.717881 | 1.2:+29391639 | MS.gene53616:CDS |
TGCCGACTACAACATCCGAG+AGG | 0.737323 | 1.2:+29391637 | MS.gene53616:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAGAATAAATGTTTAAA+CGG | - | chr1.2:29389754-29389773 | None:intergenic | 10.0% |
!! | AAAAGAATAAATGTTTAAAC+GGG | - | chr1.2:29389753-29389772 | None:intergenic | 15.0% |
!! | AAATTAAAGATGAATATTAG+AGG | + | chr1.2:29390079-29390098 | MS.gene53616:intron | 15.0% |
!! | AATAAAATAACAACTTTAAC+CGG | - | chr1.2:29391299-29391318 | None:intergenic | 15.0% |
!! | CACTATATTAAATAACTATT+GGG | + | chr1.2:29389622-29389641 | MS.gene53616:intron | 15.0% |
!! | TCACTATATTAAATAACTAT+TGG | + | chr1.2:29389621-29389640 | MS.gene53616:intron | 15.0% |
!!! | AAAAATAGAATTATGCTTTT+GGG | + | chr1.2:29391020-29391039 | MS.gene53616:CDS | 15.0% |
!!! | AAACACATGATAAATTTTTA+AGG | + | chr1.2:29389579-29389598 | MS.gene53616:intron | 15.0% |
!!! | CTTTATTTTATTCTAACAAA+CGG | + | chr1.2:29390547-29390566 | MS.gene53616:intron | 15.0% |
!!! | TAAAAATAGAATTATGCTTT+TGG | + | chr1.2:29391019-29391038 | MS.gene53616:CDS | 15.0% |
!!! | TTGATTTTAAAACTATTTCT+AGG | - | chr1.2:29389728-29389747 | None:intergenic | 15.0% |
!! | AAAGAATAAATGTTTAAACG+GGG | - | chr1.2:29389752-29389771 | None:intergenic | 20.0% |
!! | AAATCAACAAAGAAAATTTG+AGG | - | chr1.2:29391431-29391450 | None:intergenic | 20.0% |
!! | ATAAAATAACAACTTTAACC+GGG | - | chr1.2:29391298-29391317 | None:intergenic | 20.0% |
!! | CTAAATATGAGTATTTAAGT+GGG | - | chr1.2:29389984-29390003 | None:intergenic | 20.0% |
!! | CTAATATAAAAACTTTGCAT+TGG | - | chr1.2:29390481-29390500 | None:intergenic | 20.0% |
!! | TAAATATGAGTATTTAAGTG+GGG | - | chr1.2:29389983-29390002 | None:intergenic | 20.0% |
! | AAATATGAGTATTTAAGTGG+GGG | - | chr1.2:29389982-29390001 | None:intergenic | 25.0% |
! | AATAAAAGCGATTCCTTAAA+TGG | - | chr1.2:29390337-29390356 | None:intergenic | 25.0% |
! | AGAAAATAAGTTACACTGAT+AGG | + | chr1.2:29390778-29390797 | MS.gene53616:CDS | 25.0% |
! | CAATATATCATAACTATACC+TGG | - | chr1.2:29391090-29391109 | None:intergenic | 25.0% |
! | CAGGTATAGTTATGATATAT+TGG | + | chr1.2:29391088-29391107 | MS.gene53616:CDS | 25.0% |
! | CCACTTAAATACTCATATTT+AGG | + | chr1.2:29389982-29390001 | MS.gene53616:intron | 25.0% |
! | CCTAAATATGAGTATTTAAG+TGG | - | chr1.2:29389985-29390004 | None:intergenic | 25.0% |
! | GCATATATGACAACAAATTA+GGG | - | chr1.2:29389791-29389810 | None:intergenic | 25.0% |
! | TAAAATAACAACTTTAACCG+GGG | - | chr1.2:29391297-29391316 | None:intergenic | 25.0% |
! | TGCATATATGACAACAAATT+AGG | - | chr1.2:29389792-29389811 | None:intergenic | 25.0% |
!! | AAAGTGAATTACTTGTTAAG+AGG | - | chr1.2:29390024-29390043 | None:intergenic | 25.0% |
!! | ATAGTTATGATATATTGGCT+AGG | + | chr1.2:29391093-29391112 | MS.gene53616:CDS | 25.0% |
!! | CTGTTAGTGTTTTCTATTTA+TGG | + | chr1.2:29391388-29391407 | MS.gene53616:intron | 25.0% |
!! | GAAGAAAAAGATTTTTGACA+AGG | + | chr1.2:29391547-29391566 | MS.gene53616:CDS | 25.0% |
!!! | AACTTATTTTCTAACTCTGA+AGG | + | chr1.2:29389463-29389482 | MS.gene53616:intron | 25.0% |
!!! | AAGGAATCGCTTTTATTTAT+TGG | + | chr1.2:29390340-29390359 | MS.gene53616:intron | 25.0% |
!!! | AGGAATCGCTTTTATTTATT+GGG | + | chr1.2:29390341-29390360 | MS.gene53616:intron | 25.0% |
!!! | TGTCTTTTGTTATAAGAATC+TGG | - | chr1.2:29390170-29390189 | None:intergenic | 25.0% |
!!! | TTTAAAACTATTTCTAGGAC+CGG | - | chr1.2:29389723-29389742 | None:intergenic | 25.0% |
AAAATAACAACTTTAACCGG+GGG | - | chr1.2:29391296-29391315 | None:intergenic | 30.0% | |
ACTTAGGTAGAAACATAATG+AGG | + | chr1.2:29390269-29390288 | MS.gene53616:intron | 30.0% | |
AGTATGACATGATGAATAAG+TGG | + | chr1.2:29390295-29390314 | MS.gene53616:intron | 30.0% | |
ATCTTCATAAAGTCCCATAA+AGG | + | chr1.2:29391476-29391495 | MS.gene53616:CDS | 30.0% | |
ATGAAACCATTGTTCTTCAA+GGG | + | chr1.2:29390967-29390986 | MS.gene53616:CDS | 30.0% | |
GATATCTGTGATTCCATTTA+AGG | + | chr1.2:29390321-29390340 | MS.gene53616:intron | 30.0% | |
TATTCTAACAAACGGTTCAA+AGG | + | chr1.2:29390555-29390574 | MS.gene53616:intron | 30.0% | |
TGAAAGATGGGAATAGTTAA+GGG | - | chr1.2:29389410-29389429 | None:intergenic | 30.0% | |
!! | CTCTAAAGCGAGAAAATTAA+AGG | - | chr1.2:29390144-29390163 | None:intergenic | 30.0% |
!! | CTTTAATTTTCTCGCTTTAG+AGG | + | chr1.2:29390142-29390161 | MS.gene53616:intron | 30.0% |
!! | GTTTTTCAAATGCCAAACAA+AGG | + | chr1.2:29391365-29391384 | MS.gene53616:intron | 30.0% |
!! | TCTGGAATCAAATTTTCCTA+TGG | + | chr1.2:29390912-29390931 | MS.gene53616:CDS | 30.0% |
!! | TTTTCTAACTCTGAAGGTTA+AGG | + | chr1.2:29389469-29389488 | MS.gene53616:intron | 30.0% |
AAACACTAACAGCCTTTGTT+TGG | - | chr1.2:29391380-29391399 | None:intergenic | 35.0% | |
AAATAACAACTTTAACCGGG+GGG | - | chr1.2:29391295-29391314 | None:intergenic | 35.0% | |
AAATGCAAAACATGGTTGCA+AGG | + | chr1.2:29390755-29390774 | MS.gene53616:CDS | 35.0% | |
AATACGTTGCAGTGTGATAA+TGG | + | chr1.2:29390606-29390625 | MS.gene53616:intron | 35.0% | |
ACCATTTCAGACATGAACAT+GGG | + | chr1.2:29390886-29390905 | MS.gene53616:CDS | 35.0% | |
AGTTAAGAGTCCTACATTTG+TGG | - | chr1.2:29389881-29389900 | None:intergenic | 35.0% | |
ATCATAACTATACCTGGACT+CGG | - | chr1.2:29391084-29391103 | None:intergenic | 35.0% | |
ATTGTTCTTCAAGGGGAAAA+TGG | + | chr1.2:29390975-29390994 | MS.gene53616:CDS | 35.0% | |
CAAAGCATGGAAAAGGAAAT+AGG | - | chr1.2:29391266-29391285 | None:intergenic | 35.0% | |
CAAATTAGGGTGTGTTTGTT+CGG | - | chr1.2:29389778-29389797 | None:intergenic | 35.0% | |
CTGAAAGATGGGAATAGTTA+AGG | - | chr1.2:29389411-29389430 | None:intergenic | 35.0% | |
CTTAACTATTCCCATCTTTC+AGG | + | chr1.2:29389409-29389428 | MS.gene53616:CDS | 35.0% | |
GAAAAACCAAAGCATGGAAA+AGG | - | chr1.2:29391273-29391292 | None:intergenic | 35.0% | |
GAAATGCATACCTGAAAGAT+GGG | - | chr1.2:29389422-29389441 | None:intergenic | 35.0% | |
GAGGTACAACTTTCCTTTAT+GGG | - | chr1.2:29391492-29391511 | None:intergenic | 35.0% | |
GATGAAACCATTGTTCTTCA+AGG | + | chr1.2:29390966-29390985 | MS.gene53616:CDS | 35.0% | |
GGTTTCATCATTAGACTTCA+AGG | - | chr1.2:29390955-29390974 | None:intergenic | 35.0% | |
TCATGTCCAAATGCAAAACA+TGG | + | chr1.2:29390747-29390766 | MS.gene53616:CDS | 35.0% | |
TCTGATGAAAGAGTTGCTAA+AGG | - | chr1.2:29391173-29391192 | None:intergenic | 35.0% | |
TGAAACCATTGTTCTTCAAG+GGG | + | chr1.2:29390968-29390987 | MS.gene53616:CDS | 35.0% | |
TGAAATGCATACCTGAAAGA+TGG | - | chr1.2:29389423-29389442 | None:intergenic | 35.0% | |
TTGTAGGCAGCATAAAAGAA+TGG | + | chr1.2:29390218-29390237 | MS.gene53616:intron | 35.0% | |
! | ACCTAAGTGTTGTGTCTATA+GGG | - | chr1.2:29390257-29390276 | None:intergenic | 35.0% |
! | ATGCAAATATCTAGCTTGAG+AGG | - | chr1.2:29391227-29391246 | None:intergenic | 35.0% |
! | ATGTTCATGTCTGAAATGGT+CGG | - | chr1.2:29390886-29390905 | None:intergenic | 35.0% |
! | ATTTTCCCCTTGAAGAACAA+TGG | - | chr1.2:29390976-29390995 | None:intergenic | 35.0% |
! | CTATTTCCTTTTCCATGCTT+TGG | + | chr1.2:29391264-29391283 | MS.gene53616:intron | 35.0% |
! | TACCTAAGTGTTGTGTCTAT+AGG | - | chr1.2:29390258-29390277 | None:intergenic | 35.0% |
! | TGCAAATATCTAGCTTGAGA+GGG | - | chr1.2:29391226-29391245 | None:intergenic | 35.0% |
! | TTGCAACCATGTTTTGCATT+TGG | - | chr1.2:29390756-29390775 | None:intergenic | 35.0% |
AAAGCCACATAAGATGAGGA+GGG | - | chr1.2:29390200-29390219 | None:intergenic | 40.0% | |
AACTGAAATTGTTGTCCCCT+TGG | - | chr1.2:29389671-29389690 | None:intergenic | 40.0% | |
ACATCATGTCATCGCACTTA+AGG | - | chr1.2:29389830-29389849 | None:intergenic | 40.0% | |
AGACTTCAAGGAGACAATGA+AGG | - | chr1.2:29390943-29390962 | None:intergenic | 40.0% | |
AGATATTTGCATAACCCCCA+AGG | + | chr1.2:29391235-29391254 | MS.gene53616:CDS | 40.0% | |
AGCAAAGTCACATCCTGAAA+GGG | - | chr1.2:29390844-29390863 | None:intergenic | 40.0% | |
AGCATGGAAAAGGAAATAGG+AGG | - | chr1.2:29391263-29391282 | None:intergenic | 40.0% | |
AGTTGTGTTGTGGTTTACCA+AGG | + | chr1.2:29389651-29389670 | MS.gene53616:intron | 40.0% | |
CATCATGTCATCGCACTTAA+GGG | - | chr1.2:29389829-29389848 | None:intergenic | 40.0% | |
CCATTTCAGACATGAACATG+GGG | + | chr1.2:29390887-29390906 | MS.gene53616:CDS | 40.0% | |
CTACAAAGCCACATAAGATG+AGG | - | chr1.2:29390204-29390223 | None:intergenic | 40.0% | |
CTAGGACCGGAAAAAATCAA+GGG | - | chr1.2:29389710-29389729 | None:intergenic | 40.0% | |
GACCATTTCAGACATGAACA+TGG | + | chr1.2:29390885-29390904 | MS.gene53616:CDS | 40.0% | |
GAGTTGCTTGTGATTCCATT+TGG | + | chr1.2:29391191-29391210 | MS.gene53616:CDS | 40.0% | |
GATTTACTTAACTAGTGCCC+CGG | - | chr1.2:29390522-29390541 | None:intergenic | 40.0% | |
GTTGTGTTGTGGTTTACCAA+GGG | + | chr1.2:29389652-29389671 | MS.gene53616:intron | 40.0% | |
TCCAGATATCGAGTCTTCTT+GGG | - | chr1.2:29389909-29389928 | None:intergenic | 40.0% | |
TCCCTATAGACACAACACTT+AGG | + | chr1.2:29390253-29390272 | MS.gene53616:intron | 40.0% | |
TGACATGATGTGTTGTGGTT+TGG | + | chr1.2:29389839-29389858 | MS.gene53616:intron | 40.0% | |
TGCAGCAATCAAGCAAACTA+GGG | - | chr1.2:29389376-29389395 | None:intergenic | 40.0% | |
TTGCAGCAATCAAGCAAACT+AGG | - | chr1.2:29389377-29389396 | None:intergenic | 40.0% | |
TTGTGTCTATAGGGACAACT+TGG | - | chr1.2:29390248-29390267 | None:intergenic | 40.0% | |
TTGTGTTGTGGTTTACCAAG+GGG | + | chr1.2:29389653-29389672 | MS.gene53616:intron | 40.0% | |
! | ATCGCACTTAAGGGCATATA+TGG | - | chr1.2:29389820-29389839 | None:intergenic | 40.0% |
! | GGAGGTACAACTTTCCTTTA+TGG | - | chr1.2:29391493-29391512 | None:intergenic | 40.0% |
! | GTTTTTCTTAACCAGTGCTC+CGG | + | chr1.2:29390500-29390519 | MS.gene53616:intron | 40.0% |
! | TCTAGGACCGGAAAAAATCA+AGG | - | chr1.2:29389711-29389730 | None:intergenic | 40.0% |
! | TTTTCCCTCCTCATCTTATG+TGG | + | chr1.2:29390193-29390212 | MS.gene53616:intron | 40.0% |
! | TTTTTCTTAACCAGTGCTCC+GGG | + | chr1.2:29390501-29390520 | MS.gene53616:intron | 40.0% |
!! | AAAGGAAATAGGAGGTACCT+TGG | - | chr1.2:29391255-29391274 | None:intergenic | 40.0% |
!! | AAGGAAATAGGAGGTACCTT+GGG | - | chr1.2:29391254-29391273 | None:intergenic | 40.0% |
!! | CTCATCTTATGTGGCTTTGT+AGG | + | chr1.2:29390202-29390221 | MS.gene53616:intron | 40.0% |
!!! | CCATTGCCCTTGATTTTTTC+CGG | + | chr1.2:29389701-29389720 | MS.gene53616:intron | 40.0% |
AAGGAAAGTTGTACCTCCTG+AGG | + | chr1.2:29391495-29391514 | MS.gene53616:CDS | 45.0% | |
AGACATGAACATGGGGATTC+TGG | + | chr1.2:29390894-29390913 | MS.gene53616:CDS | 45.0% | |
AGGAAAGTTGTACCTCCTGA+GGG | + | chr1.2:29391496-29391515 | MS.gene53616:CDS | 45.0% | |
ATGTGACTTTGCTGCATCAG+AGG | + | chr1.2:29390851-29390870 | MS.gene53616:CDS | 45.0% | |
CAAAGCCACATAAGATGAGG+AGG | - | chr1.2:29390201-29390220 | None:intergenic | 45.0% | |
CAAAGTCACATCCTGAAAGG+GGG | - | chr1.2:29390842-29390861 | None:intergenic | 45.0% | |
CAGCAAAGTCACATCCTGAA+AGG | - | chr1.2:29390845-29390864 | None:intergenic | 45.0% | |
CCAGATATCGAGTCTTCTTG+GGG | - | chr1.2:29389908-29389927 | None:intergenic | 45.0% | |
CCCCATGTTCATGTCTGAAA+TGG | - | chr1.2:29390890-29390909 | None:intergenic | 45.0% | |
CCGGAAAAAATCAAGGGCAA+TGG | - | chr1.2:29389704-29389723 | None:intergenic | 45.0% | |
CTACCTGTTGCACTAAACTC+AGG | + | chr1.2:29390643-29390662 | MS.gene53616:CDS | 45.0% | |
CTAGGGTTGGAGATCATCAA+CGG | - | chr1.2:29389359-29389378 | None:intergenic | 45.0% | |
CTCCAGATATCGAGTCTTCT+TGG | - | chr1.2:29389910-29389929 | None:intergenic | 45.0% | |
GAGTTGCTAAAGGAACTCGT+TGG | - | chr1.2:29391163-29391182 | None:intergenic | 45.0% | |
GCAAAGTCACATCCTGAAAG+GGG | - | chr1.2:29390843-29390862 | None:intergenic | 45.0% | |
GCAATCAAGCAAACTAGGGT+TGG | - | chr1.2:29389372-29389391 | None:intergenic | 45.0% | |
GCAGTCAATCTTTGCTGCAT+TGG | + | chr1.2:29391047-29391066 | MS.gene53616:CDS | 45.0% | |
GTTCCTGAGTTTAGTGCAAC+AGG | - | chr1.2:29390649-29390668 | None:intergenic | 45.0% | |
GTTCTTCAAGGGGAAAATGG+TGG | + | chr1.2:29390978-29390997 | MS.gene53616:CDS | 45.0% | |
TACCTGGACTCGGAAGAATT+AGG | - | chr1.2:29391074-29391093 | None:intergenic | 45.0% | |
TCAAGGAGACAATGAAGGAG+TGG | - | chr1.2:29390938-29390957 | None:intergenic | 45.0% | |
TGCGATGACATGATGTGTTG+TGG | + | chr1.2:29389834-29389853 | MS.gene53616:intron | 45.0% | |
TGGGACATGAAGTTGTGTTG+TGG | + | chr1.2:29389641-29389660 | MS.gene53616:intron | 45.0% | |
! | TTTTCTTAACCAGTGCTCCG+GGG | + | chr1.2:29390502-29390521 | MS.gene53616:intron | 45.0% |
!! | AGGAAATAGGAGGTACCTTG+GGG | - | chr1.2:29391253-29391272 | None:intergenic | 45.0% |
!! | TGTGTTGTGGTTTGGTAGTG+AGG | + | chr1.2:29389847-29389866 | MS.gene53616:intron | 45.0% |
AGAGGGTCAGAGGAACCAAA+TGG | - | chr1.2:29391209-29391228 | None:intergenic | 50.0% | |
AGTGCCTCGGACACTAGTTA+AGG | + | chr1.2:29390375-29390394 | MS.gene53616:intron | 50.0% | |
ATATCCCAGTGCACCAGCAA+TGG | + | chr1.2:29391573-29391592 | MS.gene53616:CDS | 50.0% | |
CCCCAAGAAGACTCGATATC+TGG | + | chr1.2:29389905-29389924 | MS.gene53616:intron | 50.0% | |
GACAATGAAGGAGTGGCCAT+AGG | - | chr1.2:29390931-29390950 | None:intergenic | 50.0% | |
GCTTCCTTAACTAGTGTCCG+AGG | - | chr1.2:29390382-29390401 | None:intergenic | 50.0% | |
GGAACTCGTTGGACGTTCTT+CGG | - | chr1.2:29391152-29391171 | None:intergenic | 50.0% | |
GGCTGTAGCACCACAAATGT+AGG | + | chr1.2:29389868-29389887 | MS.gene53616:intron | 50.0% | |
GGTCATGTTAACCAGTGCCT+CGG | + | chr1.2:29390362-29390381 | MS.gene53616:intron | 50.0% | |
GTCCTAATTCTTCCGAGTCC+AGG | + | chr1.2:29391069-29391088 | MS.gene53616:CDS | 50.0% | |
TCGGATGTTGTAGTCGGCAA+GGG | - | chr1.2:29391636-29391655 | None:intergenic | 50.0% | |
TTAACTAGTGTCCGAGGCAC+TGG | - | chr1.2:29390376-29390395 | None:intergenic | 50.0% | |
! | ATCTAGCTTGAGAGGGTCAG+AGG | - | chr1.2:29391219-29391238 | None:intergenic | 50.0% |
! | TATCTGGAGCGTGATGTGAG+TGG | + | chr1.2:29389921-29389940 | MS.gene53616:intron | 50.0% |
!! | GGAAATAGGAGGTACCTTGG+GGG | - | chr1.2:29391252-29391271 | None:intergenic | 50.0% |
!!! | CATGCTTTGGTTTTTCCCCC+CGG | + | chr1.2:29391277-29391296 | MS.gene53616:intron | 50.0% |
CCATGTTACTGCCCCCTTTC+AGG | + | chr1.2:29390828-29390847 | MS.gene53616:CDS | 55.0% | |
CCCCTCTCGGATGTTGTAGT+CGG | - | chr1.2:29391642-29391661 | None:intergenic | 55.0% | |
CCGACTACAACATCCGAGAG+GGG | + | chr1.2:29391639-29391658 | MS.gene53616:CDS | 55.0% | |
CCTGAAAGGGGGCAGTAACA+TGG | - | chr1.2:29390831-29390850 | None:intergenic | 55.0% | |
CGAAGATGGTTGACCCCTCT+CGG | - | chr1.2:29391655-29391674 | None:intergenic | 55.0% | |
CGGGGGGAAAAACCAAAGCA+TGG | - | chr1.2:29391279-29391298 | None:intergenic | 55.0% | |
CTCGGATGTTGTAGTCGGCA+AGG | - | chr1.2:29391637-29391656 | None:intergenic | 55.0% | |
GCCGACTACAACATCCGAGA+GGG | + | chr1.2:29391638-29391657 | MS.gene53616:CDS | 55.0% | |
GGAGCGTGATGTGAGTGGTT+GGG | + | chr1.2:29389926-29389945 | MS.gene53616:intron | 55.0% | |
TGGAGCGTGATGTGAGTGGT+TGG | + | chr1.2:29389925-29389944 | MS.gene53616:intron | 55.0% | |
TGTCTGAACGCTCAACCCTC+AGG | - | chr1.2:29391514-29391533 | None:intergenic | 55.0% | |
TGTTGTAGTCGGCAAGGGTC+AGG | - | chr1.2:29391631-29391650 | None:intergenic | 55.0% | |
! | AGGGTCAGGTTGTCCTGTAG+TGG | - | chr1.2:29391617-29391636 | None:intergenic | 55.0% |
! | TGCCGACTACAACATCCGAG+AGG | + | chr1.2:29391637-29391656 | MS.gene53616:CDS | 55.0% |
ACCAGCCATTGCTGGTGCAC+TGG | - | chr1.2:29391581-29391600 | None:intergenic | 60.0% | |
CCAGCCATTGCTGGTGCACT+GGG | - | chr1.2:29391580-29391599 | None:intergenic | 60.0% | |
CTGAACGCTCAACCCTCAGG+AGG | - | chr1.2:29391511-29391530 | None:intergenic | 60.0% | |
CTGTGGCGCTAAGCCACTAC+AGG | + | chr1.2:29391601-29391620 | MS.gene53616:CDS | 60.0% | |
TAACTAGTGCCCCGGAGCAC+TGG | - | chr1.2:29390514-29390533 | None:intergenic | 60.0% | |
!! | CACCAGCAATGGCTGGTCTG+TGG | + | chr1.2:29391584-29391603 | MS.gene53616:CDS | 60.0% |
CCCAGTGCACCAGCAATGGC+TGG | + | chr1.2:29391577-29391596 | MS.gene53616:CDS | 65.0% | |
CGCCACAGACCAGCCATTGC+TGG | - | chr1.2:29391589-29391608 | None:intergenic | 65.0% | |
GTGGCGGTGGCAGACGAAGA+TGG | - | chr1.2:29391669-29391688 | None:intergenic | 65.0% | |
TCGTCTGCCACCGCCACCTT+TGG | + | chr1.2:29391672-29391691 | MS.gene53616:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 29389350 | 29391700 | 29389350 | ID=MS.gene53616 |
chr1.2 | mRNA | 29389350 | 29391700 | 29389350 | ID=MS.gene53616.t1;Parent=MS.gene53616 |
chr1.2 | exon | 29389350 | 29389430 | 29389350 | ID=MS.gene53616.t1.exon1;Parent=MS.gene53616.t1 |
chr1.2 | CDS | 29389350 | 29389430 | 29389350 | ID=cds.MS.gene53616.t1;Parent=MS.gene53616.t1 |
chr1.2 | exon | 29390618 | 29391256 | 29390618 | ID=MS.gene53616.t1.exon2;Parent=MS.gene53616.t1 |
chr1.2 | CDS | 29390618 | 29391256 | 29390618 | ID=cds.MS.gene53616.t1;Parent=MS.gene53616.t1 |
chr1.2 | exon | 29391470 | 29391700 | 29391470 | ID=MS.gene53616.t1.exon3;Parent=MS.gene53616.t1 |
chr1.2 | CDS | 29391470 | 29391700 | 29391470 | ID=cds.MS.gene53616.t1;Parent=MS.gene53616.t1 |
Gene Sequence |
Protein sequence |