Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017321.t1 | RHN56826.1 | 71.2 | 222 | 63 | 1 | 2 | 222 | 125 | 346 | 5.20E-82 | 314.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017321.t1 | P0CG70 | 48.1 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 8.2e-12 | 72.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017321.t1 | G7KFS7 | 71.2 | 222 | 63 | 1 | 2 | 222 | 162 | 383 | 3.7e-82 | 314.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017321.t1 | MTR_5g076720 | 70.614 | 228 | 65 | 2 | 2 | 227 | 162 | 389 | 3.26e-105 | 310 |
MS.gene017321.t1 | MTR_5g076810 | 66.216 | 222 | 72 | 2 | 2 | 222 | 44 | 263 | 3.98e-95 | 280 |
MS.gene017321.t1 | MTR_1g046640 | 64.253 | 221 | 77 | 1 | 2 | 222 | 90 | 308 | 3.80e-91 | 272 |
MS.gene017321.t1 | MTR_5g067400 | 64.253 | 221 | 77 | 1 | 2 | 222 | 91 | 309 | 6.24e-90 | 269 |
MS.gene017321.t1 | MTR_1g046650 | 63.927 | 219 | 77 | 1 | 2 | 220 | 21 | 237 | 7.61e-90 | 266 |
MS.gene017321.t1 | MTR_2g038420 | 62.609 | 230 | 82 | 3 | 2 | 227 | 105 | 334 | 7.22e-89 | 266 |
MS.gene017321.t1 | MTR_1g046650 | 63.927 | 219 | 77 | 1 | 2 | 220 | 90 | 306 | 1.32e-88 | 265 |
MS.gene017321.t1 | MTR_1g046650 | 63.927 | 219 | 77 | 1 | 2 | 220 | 90 | 306 | 4.22e-88 | 264 |
MS.gene017321.t1 | MTR_1g046650 | 63.927 | 219 | 77 | 1 | 2 | 220 | 121 | 337 | 8.47e-88 | 264 |
MS.gene017321.t1 | MTR_7g024290 | 62.389 | 226 | 82 | 2 | 2 | 226 | 91 | 314 | 4.17e-86 | 259 |
MS.gene017321.t1 | MTR_5g061290 | 58.036 | 224 | 91 | 1 | 2 | 222 | 97 | 320 | 1.65e-83 | 253 |
MS.gene017321.t1 | MTR_2g038430 | 58.824 | 238 | 86 | 3 | 2 | 227 | 105 | 342 | 7.07e-83 | 251 |
MS.gene017321.t1 | MTR_5g076505 | 58.108 | 222 | 92 | 1 | 2 | 222 | 87 | 308 | 8.96e-83 | 250 |
MS.gene017321.t1 | MTR_5g076520 | 60.538 | 223 | 86 | 2 | 2 | 222 | 91 | 313 | 1.23e-81 | 248 |
MS.gene017321.t1 | MTR_7g094390 | 59.817 | 219 | 86 | 1 | 2 | 220 | 252 | 468 | 1.98e-80 | 249 |
MS.gene017321.t1 | MTR_5g076660 | 57.576 | 231 | 93 | 2 | 2 | 229 | 113 | 341 | 1.76e-77 | 238 |
MS.gene017321.t1 | MTR_5g076370 | 54.018 | 224 | 98 | 2 | 2 | 222 | 114 | 335 | 1.78e-70 | 220 |
MS.gene017321.t1 | MTR_5g076820 | 62.295 | 183 | 65 | 3 | 2 | 181 | 98 | 279 | 9.91e-68 | 211 |
MS.gene017321.t1 | MTR_5g076540 | 69.565 | 138 | 42 | 0 | 2 | 139 | 91 | 228 | 9.61e-62 | 194 |
MS.gene017321.t1 | MTR_5g077020 | 68.456 | 149 | 41 | 3 | 2 | 148 | 62 | 206 | 2.52e-58 | 185 |
MS.gene017321.t1 | MTR_4g058025 | 70.476 | 105 | 30 | 1 | 2 | 105 | 24 | 128 | 1.63e-43 | 146 |
MS.gene017321.t1 | MTR_4g094468 | 39.073 | 151 | 91 | 1 | 2 | 152 | 177 | 326 | 5.61e-26 | 103 |
MS.gene017321.t1 | MTR_4g088485 | 48.101 | 79 | 41 | 0 | 144 | 222 | 128 | 206 | 2.22e-15 | 73.2 |
MS.gene017321.t1 | MTR_4g088485 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.00e-14 | 70.5 |
MS.gene017321.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.43e-15 | 73.2 |
MS.gene017321.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.43e-15 | 73.2 |
MS.gene017321.t1 | MTR_7g116360 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.94e-14 | 70.9 |
MS.gene017321.t1 | MTR_1g066390 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.58e-15 | 73.2 |
MS.gene017321.t1 | MTR_1g066390 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.58e-15 | 73.2 |
MS.gene017321.t1 | MTR_1g066390 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.08e-14 | 70.9 |
MS.gene017321.t1 | MTR_5g092700 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.24e-15 | 70.9 |
MS.gene017321.t1 | MTR_4g073580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.24e-15 | 70.9 |
MS.gene017321.t1 | MTR_4g080920 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.71e-15 | 72.4 |
MS.gene017321.t1 | MTR_4g080920 | 52.174 | 69 | 33 | 0 | 154 | 222 | 1 | 69 | 1.90e-13 | 68.2 |
MS.gene017321.t1 | MTR_6g061930 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.88e-15 | 73.2 |
MS.gene017321.t1 | MTR_6g061930 | 48.101 | 79 | 41 | 0 | 144 | 222 | 204 | 282 | 5.88e-15 | 73.2 |
MS.gene017321.t1 | MTR_6g061930 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.84e-14 | 70.5 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.00e-15 | 72.8 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.00e-15 | 72.8 |
MS.gene017321.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.41e-14 | 70.5 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.26e-15 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.26e-15 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.26e-15 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.58e-14 | 70.9 |
MS.gene017321.t1 | MTR_7g105080 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.00e-15 | 69.7 |
MS.gene017321.t1 | MTR_3g092130 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.00e-15 | 69.7 |
MS.gene017321.t1 | MTR_1g059690 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.00e-15 | 69.7 |
MS.gene017321.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 115 | 193 | 8.83e-15 | 72.4 |
MS.gene017321.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 191 | 269 | 8.83e-15 | 72.4 |
MS.gene017321.t1 | MTR_7g116360 | 44.330 | 97 | 52 | 1 | 126 | 222 | 23 | 117 | 2.51e-14 | 71.2 |
MS.gene017321.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.17e-15 | 73.6 |
MS.gene017321.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.17e-15 | 73.6 |
MS.gene017321.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.17e-15 | 73.6 |
MS.gene017321.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.17e-15 | 73.6 |
MS.gene017321.t1 | MTR_8g081020 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.34e-14 | 70.9 |
MS.gene017321.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.53e-15 | 73.6 |
MS.gene017321.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.53e-15 | 73.6 |
MS.gene017321.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.53e-15 | 73.6 |
MS.gene017321.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.27e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g091580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.58e-14 | 70.9 |
MS.gene017321.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.01e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.01e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.01e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.01e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g080797 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.97e-14 | 70.9 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.01e-14 | 73.2 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.01e-14 | 73.2 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.01e-14 | 73.2 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.01e-14 | 73.2 |
MS.gene017321.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.97e-14 | 70.9 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.05e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.05e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.05e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.05e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.17e-14 | 70.9 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.13e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.13e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.13e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.13e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.13e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.69e-14 | 70.9 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.13e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.13e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.13e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.13e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.13e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.69e-14 | 70.9 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.00e-14 | 69.7 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.24e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.24e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.24e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.24e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.24e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 1.24e-14 | 73.6 |
MS.gene017321.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.25e-14 | 70.9 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.30e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.30e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.30e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.30e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.30e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 1.30e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.65e-14 | 70.9 |
MS.gene017321.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.34e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.34e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.34e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.34e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 1.34e-14 | 73.2 |
MS.gene017321.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 5.62e-14 | 71.6 |
MS.gene017321.t1 | MTR_4g091580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.89e-14 | 70.9 |
MS.gene017321.t1 | MTR_4g073580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.36e-14 | 70.5 |
MS.gene017321.t1 | MTR_3g092130 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.68e-14 | 68.9 |
MS.gene017321.t1 | MTR_8g088060 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.01e-14 | 69.3 |
MS.gene017321.t1 | MTR_5g033960 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.32e-14 | 68.9 |
MS.gene017321.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 3.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 3.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 3.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 3.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 3.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 3.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 523 | 601 | 3.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 599 | 677 | 3.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 675 | 753 | 3.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 751 | 829 | 3.14e-14 | 72.4 |
MS.gene017321.t1 | MTR_4g088495 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 9.83e-14 | 70.9 |
MS.gene017321.t1 | MTR_5g061310 | 45.205 | 73 | 39 | 1 | 156 | 227 | 4 | 76 | 1.41e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017321.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.67e-16 | 73.2 |
MS.gene017321.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.60e-15 | 70.9 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.67e-16 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.60e-15 | 70.9 |
MS.gene017321.t1 | AT1G55060 | 45.977 | 87 | 47 | 0 | 136 | 222 | 59 | 145 | 1.51e-15 | 73.9 |
MS.gene017321.t1 | AT1G55060 | 45.570 | 79 | 43 | 0 | 144 | 222 | 143 | 221 | 4.18e-13 | 67.4 |
MS.gene017321.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.54e-15 | 73.2 |
MS.gene017321.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.54e-15 | 73.2 |
MS.gene017321.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 70.9 |
MS.gene017321.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.54e-15 | 73.2 |
MS.gene017321.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.54e-15 | 73.2 |
MS.gene017321.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 70.9 |
MS.gene017321.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.54e-15 | 73.2 |
MS.gene017321.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.54e-15 | 73.2 |
MS.gene017321.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 70.9 |
MS.gene017321.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.54e-15 | 73.2 |
MS.gene017321.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.54e-15 | 73.2 |
MS.gene017321.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 70.9 |
MS.gene017321.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.54e-15 | 73.2 |
MS.gene017321.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.54e-15 | 73.2 |
MS.gene017321.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 70.9 |
MS.gene017321.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G03240 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.26e-14 | 70.9 |
MS.gene017321.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G03240 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.26e-14 | 70.9 |
MS.gene017321.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G03240 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.26e-14 | 70.9 |
MS.gene017321.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 5.83e-15 | 73.6 |
MS.gene017321.t1 | AT5G20620 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.26e-14 | 70.9 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.57e-14 | 70.9 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.57e-14 | 70.9 |
MS.gene017321.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.57e-14 | 70.9 |
MS.gene017321.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.25e-15 | 73.2 |
MS.gene017321.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.57e-14 | 70.9 |
MS.gene017321.t1 | AT2G35635 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.75e-15 | 70.5 |
MS.gene017321.t1 | AT1G31340 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.14e-15 | 70.5 |
MS.gene017321.t1 | AT1G65350 | 48.101 | 79 | 41 | 0 | 144 | 222 | 142 | 220 | 9.22e-15 | 73.2 |
MS.gene017321.t1 | AT1G65350 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.62e-14 | 70.9 |
MS.gene017321.t1 | AT1G65350 | 46.835 | 79 | 41 | 1 | 144 | 222 | 67 | 144 | 2.85e-12 | 65.9 |
MS.gene017321.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.65e-15 | 73.6 |
MS.gene017321.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.65e-15 | 73.6 |
MS.gene017321.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.65e-15 | 73.6 |
MS.gene017321.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.65e-15 | 73.6 |
MS.gene017321.t1 | AT5G20620 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.79e-14 | 70.9 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.30e-14 | 70.9 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.30e-14 | 70.9 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.06e-14 | 73.2 |
MS.gene017321.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.30e-14 | 70.9 |
MS.gene017321.t1 | AT3G52590 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.07e-14 | 69.3 |
MS.gene017321.t1 | AT2G36170 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.07e-14 | 69.3 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.18e-14 | 73.6 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.18e-14 | 73.6 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.18e-14 | 73.6 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.18e-14 | 73.6 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.18e-14 | 73.6 |
MS.gene017321.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.06e-14 | 70.9 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.18e-14 | 73.6 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.18e-14 | 73.6 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.18e-14 | 73.6 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.18e-14 | 73.6 |
MS.gene017321.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.18e-14 | 73.6 |
MS.gene017321.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.06e-14 | 70.9 |
MS.gene017321.t1 | AT1G23410 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.62e-14 | 69.7 |
MS.gene017321.t1 | AT2G47110 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.15e-14 | 69.3 |
MS.gene017321.t1 | AT2G47110 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.15e-14 | 69.3 |
MS.gene017321.t1 | AT3G62250 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.48e-14 | 68.9 |
MS.gene017321.t1 | AT5G37640 | 46.835 | 79 | 42 | 0 | 144 | 222 | 69 | 147 | 2.77e-14 | 71.6 |
MS.gene017321.t1 | AT5G37640 | 44.304 | 79 | 44 | 0 | 144 | 222 | 145 | 223 | 5.71e-12 | 65.1 |
MS.gene017321.t1 | AT5G37640 | 46.250 | 80 | 42 | 1 | 144 | 222 | 221 | 300 | 1.58e-11 | 63.5 |
MS.gene017321.t1 | AT5G37930 | 29.801 | 151 | 102 | 2 | 2 | 148 | 190 | 340 | 2.49e-13 | 69.3 |
MS.gene017321.t1 | AT3G09790 | 46.835 | 79 | 42 | 0 | 144 | 222 | 69 | 147 | 5.08e-13 | 68.9 |
MS.gene017321.t1 | AT3G09790 | 50.000 | 70 | 35 | 0 | 153 | 222 | 2 | 71 | 1.09e-11 | 64.7 |
MS.gene017321.t1 | AT3G09790 | 43.478 | 92 | 42 | 3 | 144 | 225 | 459 | 550 | 5.47e-11 | 62.8 |
MS.gene017321.t1 | AT3G09790 | 46.835 | 79 | 42 | 0 | 144 | 222 | 69 | 147 | 5.08e-13 | 68.9 |
MS.gene017321.t1 | AT3G09790 | 50.000 | 70 | 35 | 0 | 153 | 222 | 2 | 71 | 1.09e-11 | 64.7 |
MS.gene017321.t1 | AT3G09790 | 43.478 | 92 | 42 | 3 | 144 | 225 | 459 | 550 | 5.47e-11 | 62.8 |
MS.gene017321.t1 | AT1G53930 | 46.479 | 71 | 38 | 0 | 156 | 226 | 88 | 158 | 2.22e-12 | 63.9 |
Find 52 sgRNAs with CRISPR-Local
Find 68 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTCTGATTTCTTAACTCTA+AGG | 0.248144 | 5.1:-59588983 | None:intergenic |
GTTCTTCAAGAGGAAAATTA+TGG | 0.263266 | 5.1:+59588441 | MS.gene017321:CDS |
CTAGGCCCTTTACAAAGATT+TGG | 0.273442 | 5.1:-59588944 | None:intergenic |
GCAGTCAATATTTGCTGCTT+TGG | 0.307306 | 5.1:+59588507 | MS.gene017321:CDS |
GTCTCACTCCAGCGTTCTCT+TGG | 0.353127 | 5.1:+59589140 | MS.gene017321:CDS |
ATCTTTGTAAAGGGCCTAGA+TGG | 0.353834 | 5.1:+59588948 | MS.gene017321:CDS |
TACTCGGACTCGGGTGTGTC+TGG | 0.357737 | 5.1:-59588531 | None:intergenic |
CATCTCGTCAACGGCGGAAA+AGG | 0.365718 | 5.1:-59589227 | None:intergenic |
AGAAACTCTGATGAAAGATT+TGG | 0.377110 | 5.1:-59588636 | None:intergenic |
ACTAATCGCCAATCGTCTTC+CGG | 0.382591 | 5.1:-59589173 | None:intergenic |
AACAAAGTCACAACCTGAAA+AGG | 0.402082 | 5.1:-59588304 | None:intergenic |
GGTTTCATCATTAGACTTCA+AGG | 0.410456 | 5.1:-59588415 | None:intergenic |
TATAGATGTTGTAGTCGAAA+AGG | 0.428331 | 5.1:-59589106 | None:intergenic |
AAAGGGTCAGGTTTCCATAT+AGG | 0.437972 | 5.1:-59589088 | None:intergenic |
ATCAGACGTTGAGCGGCCAC+TGG | 0.450646 | 5.1:-59589050 | None:intergenic |
GGGTCATACACTTTCCATCT+AGG | 0.451359 | 5.1:-59588962 | None:intergenic |
GTCTGATTTCTTAACTCTAA+GGG | 0.469256 | 5.1:-59588982 | None:intergenic |
TATTGCAAAGAATGTCCAAC+AGG | 0.484330 | 5.1:+59588605 | MS.gene017321:CDS |
TCTCACTCCAGCGTTCTCTT+GGG | 0.485099 | 5.1:+59589141 | MS.gene017321:CDS |
CAGATCCAAATCTTTGTAAA+GGG | 0.487025 | 5.1:+59588939 | MS.gene017321:intron |
TGTTGTAGTCGAAAAGGGTC+AGG | 0.487757 | 5.1:-59589100 | None:intergenic |
AGAGGTTCAGAAGAATCAAA+TGG | 0.487848 | 5.1:-59588666 | None:intergenic |
CAATATATCATAACTATACT+CGG | 0.493864 | 5.1:-59588547 | None:intergenic |
GCAGATCCAAATCTTTGTAA+AGG | 0.495328 | 5.1:+59588938 | MS.gene017321:intron |
ATAGATGTTGTAGTCGAAAA+GGG | 0.531303 | 5.1:-59589105 | None:intergenic |
TGAAACCATTGTTCTTCAAG+AGG | 0.538905 | 5.1:+59588431 | MS.gene017321:CDS |
ACAAAGTCACAACCTGAAAA+GGG | 0.540410 | 5.1:-59588303 | None:intergenic |
AGACTTCAAGGAGACAATGA+AGG | 0.541721 | 5.1:-59588403 | None:intergenic |
CTAGACGGCCGGAAGACGAT+TGG | 0.543135 | 5.1:+59589165 | MS.gene017321:CDS |
TTCTCTTGGGACTAGACGGC+CGG | 0.543462 | 5.1:+59589154 | MS.gene017321:CDS |
ATGCAAATTTCTAGCTTGAG+AGG | 0.547282 | 5.1:-59588684 | None:intergenic |
AGGGACAGTAACATGGCTTA+CGG | 0.547857 | 5.1:-59588284 | None:intergenic |
GGTGGACAATTGTCAAATGT+TGG | 0.563243 | 5.1:-59589200 | None:intergenic |
ATCATAACTATACTCGGACT+CGG | 0.565356 | 5.1:-59588541 | None:intergenic |
GTCAACGGCGGAAAAGGATG+AGG | 0.572483 | 5.1:-59589221 | None:intergenic |
TGCATTTCAGCGATAAACAC+GGG | 0.578429 | 5.1:+59588349 | MS.gene017321:CDS |
TCATAACTATACTCGGACTC+GGG | 0.578996 | 5.1:-59588540 | None:intergenic |
GATTTGGTAAAGTAACCTGT+TGG | 0.586732 | 5.1:-59588620 | None:intergenic |
CCTGAAAAGGGACAGTAACA+TGG | 0.591203 | 5.1:-59588291 | None:intergenic |
TCAGACGTTGAGCGGCCACT+GGG | 0.601307 | 5.1:-59589049 | None:intergenic |
AACGGCGGAAAAGGATGAGG+TGG | 0.604435 | 5.1:-59589218 | None:intergenic |
GTGCATTTCAGCGATAAACA+CGG | 0.612101 | 5.1:+59588348 | MS.gene017321:CDS |
AGCGTTCTCTTGGGACTAGA+CGG | 0.615006 | 5.1:+59589150 | MS.gene017321:CDS |
GTCTAGTCCCAAGAGAACGC+TGG | 0.620661 | 5.1:-59589148 | None:intergenic |
TTGCATTCACGTAACCTCCA+CGG | 0.623413 | 5.1:+59588701 | MS.gene017321:CDS |
TGAGGTGGTCATCTCGTCAA+CGG | 0.624853 | 5.1:-59589236 | None:intergenic |
GCAAAAGATCAGACGTTGAG+CGG | 0.628431 | 5.1:-59589057 | None:intergenic |
AAGAGAACGCTGGAGTGAGA+CGG | 0.637960 | 5.1:-59589138 | None:intergenic |
GCATTTCAGCGATAAACACG+GGG | 0.695447 | 5.1:+59588350 | MS.gene017321:CDS |
GGTGGTCATCTCGTCAACGG+CGG | 0.713045 | 5.1:-59589233 | None:intergenic |
GGATATAGGAAATACCGTGG+AGG | 0.730393 | 5.1:-59588715 | None:intergenic |
TGACAAGACTGAGATCCCAG+TGG | 0.762074 | 5.1:+59589034 | MS.gene017321:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAATATTATTACTCTTTT+AGG | + | chr5.1:59588480-59588499 | MS.gene017321:CDS | 10.0% |
!!! | ATTTTCTTTTATTGATTTAA+TGG | + | chr5.1:59588905-59588924 | MS.gene017321:intron | 10.0% |
!! | CAATATATCATAACTATACT+CGG | - | chr5.1:59588550-59588569 | None:intergenic | 20.0% |
!!! | CTCAAATCAAATTTTCTTAT+GGG | + | chr5.1:59588376-59588395 | MS.gene017321:CDS | 20.0% |
!!! | TATTGATTTAATGGAAATTG+TGG | + | chr5.1:59588914-59588933 | MS.gene017321:intron | 20.0% |
!!! | TCTCAAATCAAATTTTCTTA+TGG | + | chr5.1:59588375-59588394 | MS.gene017321:CDS | 20.0% |
! | GCAAATTATCTCAAATTCAT+CGG | + | chr5.1:59588808-59588827 | MS.gene017321:intron | 25.0% |
! | TAAAATACCAAGATTTCACT+AGG | - | chr5.1:59588763-59588782 | None:intergenic | 25.0% |
AAATAGCCAAAGCAAAGAAT+AGG | - | chr5.1:59588739-59588758 | None:intergenic | 30.0% | |
AGAAACTCTGATGAAAGATT+TGG | - | chr5.1:59588639-59588658 | None:intergenic | 30.0% | |
ATAGATGTTGTAGTCGAAAA+GGG | - | chr5.1:59589108-59589127 | None:intergenic | 30.0% | |
CAAAGCAAAGAATAGGATAT+AGG | - | chr5.1:59588732-59588751 | None:intergenic | 30.0% | |
CAGATCCAAATCTTTGTAAA+GGG | + | chr5.1:59588939-59588958 | MS.gene017321:intron | 30.0% | |
CTATATCCTATTCTTTGCTT+TGG | + | chr5.1:59588730-59588749 | MS.gene017321:intron | 30.0% | |
GTCTGATTTCTTAACTCTAA+GGG | - | chr5.1:59588985-59589004 | None:intergenic | 30.0% | |
GTTCTTCAAGAGGAAAATTA+TGG | + | chr5.1:59588441-59588460 | MS.gene017321:CDS | 30.0% | |
TATAGATGTTGTAGTCGAAA+AGG | - | chr5.1:59589109-59589128 | None:intergenic | 30.0% | |
TGTCTGATTTCTTAACTCTA+AGG | - | chr5.1:59588986-59589005 | None:intergenic | 30.0% | |
! | ATTTTCCTCTTGAAGAACAA+TGG | - | chr5.1:59588439-59588458 | None:intergenic | 30.0% |
! | CTATTTTCCTAGTGAAATCT+TGG | + | chr5.1:59588753-59588772 | MS.gene017321:intron | 30.0% |
!! | GTTTTTCAAACGCCAAAAAA+CGG | + | chr5.1:59588830-59588849 | MS.gene017321:intron | 30.0% |
!!! | AAACACAAACAACCGTTTTT+TGG | - | chr5.1:59588845-59588864 | None:intergenic | 30.0% |
AACAAAGTCACAACCTGAAA+AGG | - | chr5.1:59588307-59588326 | None:intergenic | 35.0% | |
ACAAAGTCACAACCTGAAAA+GGG | - | chr5.1:59588306-59588325 | None:intergenic | 35.0% | |
AGAGGTTCAGAAGAATCAAA+TGG | - | chr5.1:59588669-59588688 | None:intergenic | 35.0% | |
ATAGGATATAGGAAATACCG+TGG | - | chr5.1:59588721-59588740 | None:intergenic | 35.0% | |
ATCATAACTATACTCGGACT+CGG | - | chr5.1:59588544-59588563 | None:intergenic | 35.0% | |
GCAGATCCAAATCTTTGTAA+AGG | + | chr5.1:59588938-59588957 | MS.gene017321:intron | 35.0% | |
GGTTTCATCATTAGACTTCA+AGG | - | chr5.1:59588418-59588437 | None:intergenic | 35.0% | |
TATTGCAAAGAATGTCCAAC+AGG | + | chr5.1:59588605-59588624 | MS.gene017321:CDS | 35.0% | |
TGAAACCATTGTTCTTCAAG+AGG | + | chr5.1:59588431-59588450 | MS.gene017321:CDS | 35.0% | |
! | GATTTGGTAAAGTAACCTGT+TGG | - | chr5.1:59588623-59588642 | None:intergenic | 35.0% |
! | TTTTGCGGTAGATACCTATA+TGG | + | chr5.1:59589074-59589093 | MS.gene017321:CDS | 35.0% |
!! | ATGCAAATTTCTAGCTTGAG+AGG | - | chr5.1:59588687-59588706 | None:intergenic | 35.0% |
AAAGGGTCAGGTTTCCATAT+AGG | - | chr5.1:59589091-59589110 | None:intergenic | 40.0% | |
AGACTTCAAGGAGACAATGA+AGG | - | chr5.1:59588406-59588425 | None:intergenic | 40.0% | |
ATCTTTGTAAAGGGCCTAGA+TGG | + | chr5.1:59588948-59588967 | MS.gene017321:CDS | 40.0% | |
CTAGGCCCTTTACAAAGATT+TGG | - | chr5.1:59588947-59588966 | None:intergenic | 40.0% | |
GGTGGACAATTGTCAAATGT+TGG | - | chr5.1:59589203-59589222 | None:intergenic | 40.0% | |
GTGCATTTCAGCGATAAACA+CGG | + | chr5.1:59588348-59588367 | MS.gene017321:CDS | 40.0% | |
TCATAACTATACTCGGACTC+GGG | - | chr5.1:59588543-59588562 | None:intergenic | 40.0% | |
TGCATTTCAGCGATAAACAC+GGG | + | chr5.1:59588349-59588368 | MS.gene017321:CDS | 40.0% | |
! | GCAGTCAATATTTGCTGCTT+TGG | + | chr5.1:59588507-59588526 | MS.gene017321:CDS | 40.0% |
ACTAATCGCCAATCGTCTTC+CGG | - | chr5.1:59589176-59589195 | None:intergenic | 45.0% | |
AGGGACAGTAACATGGCTTA+CGG | - | chr5.1:59588287-59588306 | None:intergenic | 45.0% | |
CCTGAAAAGGGACAGTAACA+TGG | - | chr5.1:59588294-59588313 | None:intergenic | 45.0% | |
GCAAAAGATCAGACGTTGAG+CGG | - | chr5.1:59589060-59589079 | None:intergenic | 45.0% | |
GCATTTCAGCGATAAACACG+GGG | + | chr5.1:59588350-59588369 | MS.gene017321:CDS | 45.0% | |
GGATATAGGAAATACCGTGG+AGG | - | chr5.1:59588718-59588737 | None:intergenic | 45.0% | |
GGGTCATACACTTTCCATCT+AGG | - | chr5.1:59588965-59588984 | None:intergenic | 45.0% | |
TGTTGTAGTCGAAAAGGGTC+AGG | - | chr5.1:59589103-59589122 | None:intergenic | 45.0% | |
TTGCATTCACGTAACCTCCA+CGG | + | chr5.1:59588701-59588720 | MS.gene017321:CDS | 45.0% | |
! | CCATGTTACTGTCCCTTTTC+AGG | + | chr5.1:59588291-59588310 | MS.gene017321:CDS | 45.0% |
! | GCTCAACGTCTGATCTTTTG+CGG | + | chr5.1:59589059-59589078 | MS.gene017321:CDS | 45.0% |
AAGAGAACGCTGGAGTGAGA+CGG | - | chr5.1:59589141-59589160 | None:intergenic | 50.0% | |
AGCGTTCTCTTGGGACTAGA+CGG | + | chr5.1:59589150-59589169 | MS.gene017321:CDS | 50.0% | |
TCTCACTCCAGCGTTCTCTT+GGG | + | chr5.1:59589141-59589160 | MS.gene017321:CDS | 50.0% | |
TGACAAGACTGAGATCCCAG+TGG | + | chr5.1:59589034-59589053 | MS.gene017321:CDS | 50.0% | |
AACGGCGGAAAAGGATGAGG+TGG | - | chr5.1:59589221-59589240 | None:intergenic | 55.0% | |
CATCTCGTCAACGGCGGAAA+AGG | - | chr5.1:59589230-59589249 | None:intergenic | 55.0% | |
GTCAACGGCGGAAAAGGATG+AGG | - | chr5.1:59589224-59589243 | None:intergenic | 55.0% | |
GTCTAGTCCCAAGAGAACGC+TGG | - | chr5.1:59589151-59589170 | None:intergenic | 55.0% | |
GTCTCACTCCAGCGTTCTCT+TGG | + | chr5.1:59589140-59589159 | MS.gene017321:CDS | 55.0% | |
TTCTCTTGGGACTAGACGGC+CGG | + | chr5.1:59589154-59589173 | MS.gene017321:CDS | 55.0% | |
ATCAGACGTTGAGCGGCCAC+TGG | - | chr5.1:59589053-59589072 | None:intergenic | 60.0% | |
CTAGACGGCCGGAAGACGAT+TGG | + | chr5.1:59589165-59589184 | MS.gene017321:CDS | 60.0% | |
TACTCGGACTCGGGTGTGTC+TGG | - | chr5.1:59588534-59588553 | None:intergenic | 60.0% | |
TCAGACGTTGAGCGGCCACT+GGG | - | chr5.1:59589052-59589071 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 59588264 | 59589250 | 59588264 | ID=MS.gene017321 |
chr5.1 | mRNA | 59588264 | 59589250 | 59588264 | ID=MS.gene017321.t1;Parent=MS.gene017321 |
chr5.1 | exon | 59588264 | 59588722 | 59588264 | ID=MS.gene017321.t1.exon1;Parent=MS.gene017321.t1 |
chr5.1 | CDS | 59588264 | 59588722 | 59588264 | ID=cds.MS.gene017321.t1;Parent=MS.gene017321.t1 |
chr5.1 | exon | 59588942 | 59589250 | 59588942 | ID=MS.gene017321.t1.exon2;Parent=MS.gene017321.t1 |
chr5.1 | CDS | 59588942 | 59589250 | 59588942 | ID=cds.MS.gene017321.t1;Parent=MS.gene017321.t1 |
Gene Sequence |
Protein sequence |