AlfalfaGEDB | MS.gene009577

M. sativa cultivar XinJiangDaYe / MS.gene009577

KEGG: K04506
GO: GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0019538 GO:0019941 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0046872 GO:0046914 GO:0048856 GO:0051603 GO:0071704 GO:0110165 GO:1901564 GO:1901575
PFAM: PF00240.26 PF03145.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009577.t1	AES99109.2	82.6	344	43	2	1	327	1	344	3.60E-152	547.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009577.t1	Q84K34	38.1	244	149	2	10	251	88	331	1.7e-41	171.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009577.t1	G7KFS2	82.6	344	43	2	1	327	1	344	2.6e-152	547.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene009577	MS.gene81818	PPI
MS.gene009577	MS.gene26191	PPI
MS.gene009577	MS.gene52735	PPI
MS.gene009577	MS.gene063596	PPI
MS.gene009577	MS.gene032536	PPI
MS.gene009577	MS.gene025074	PPI
MS.gene009577	MS.gene53618	PPI
MS.gene009577	MS.gene009566	PPI
MS.gene81807	MS.gene009577	PPI
MS.gene009577	MS.gene063586	PPI
MS.gene009577	MS.gene064974	PPI
MS.gene017309	MS.gene009577	PPI
MS.gene009577	MS.gene017315	PPI
MS.gene009577	MS.gene73973	PPI
MS.gene009577	MS.gene26198	PPI
MS.gene009577	MS.gene032535	PPI
MS.gene009577	MS.gene017314	PPI
MS.gene009577	MS.gene062461	PPI
MS.gene37878	MS.gene009577	PPI
MS.gene009577	MS.gene063587	PPI
MS.gene009577	MS.gene064975	PPI
MS.gene017314	MS.gene009577	PPI
MS.gene009577	MS.gene37878	PPI
MS.gene009577	MS.gene94985	PPI
MS.gene009577	MS.gene063603	PPI
MS.gene009577	MS.gene73975	PPI
MS.gene009577	MS.gene009591	PPI
MS.gene009577	MS.gene062462	PPI
MS.gene009577	MS.gene92433	PPI
MS.gene009577	MS.gene009561	PPI
MS.gene009577	MS.gene94984	PPI
MS.gene009577	MS.gene063584	PPI
MS.gene26198	MS.gene009577	PPI
MS.gene009577	MS.gene26189	PPI
MS.gene009577	MS.gene92427	PPI
MS.gene009577	MS.gene74055	PPI
MS.gene009577	MS.gene009564	PPI
MS.gene009577	MS.gene009543	PPI
MS.gene009577	MS.gene92432	PPI
MS.gene009577	MS.gene81557	PPI
MS.gene009577	MS.gene73977	PPI
MS.gene009577	MS.gene044969	PPI
MS.gene009577	MS.gene010031	PPI
MS.gene009577	MS.gene64287	PPI
MS.gene009577	MS.gene39862	PPI
MS.gene009577	MS.gene53619	PPI
MS.gene009577	MS.gene063610	PPI
MS.gene009577	MS.gene53616	PPI
MS.gene009577	MS.gene009560	PPI
MS.gene009577	MS.gene044971	PPI
MS.gene009577	MS.gene044173	PPI
MS.gene009562	MS.gene009577	PPI
MS.gene26191	MS.gene009577	PPI
MS.gene009577	MS.gene21254	PPI
MS.gene009577	MS.gene053691	PPI
MS.gene009577	MS.gene41691	PPI
MS.gene063603	MS.gene009577	PPI
MS.gene009577	MS.gene61945	PPI
MS.gene009577	MS.gene053692	PPI
MS.gene92435	MS.gene009577	PPI
MS.gene009577	MS.gene009576	PPI
MS.gene009577	MS.gene70750	PPI
MS.gene009577	MS.gene04692	PPI
MS.gene009577	MS.gene009547	PPI
MS.gene009577	MS.gene063599	PPI
MS.gene009577	MS.gene017308	PPI
MS.gene009577	MS.gene26197	PPI
MS.gene009577	MS.gene017300	PPI
MS.gene017324	MS.gene009577	PPI
MS.gene009577	MS.gene74054	PPI
MS.gene009577	MS.gene063583	PPI
MS.gene009577	MS.gene72920	PPI
MS.gene009561	MS.gene009577	PPI
MS.gene009577	MS.gene26190	PPI
MS.gene009577	MS.gene023735	PPI
MS.gene009577	MS.gene017324	PPI
MS.gene009577	MS.gene26186	PPI
MS.gene009577	MS.gene063576	PPI
MS.gene009577	MS.gene016802	PPI
MS.gene009577	MS.gene009559	PPI
MS.gene009577	MS.gene26202	PPI
MS.gene009577	MS.gene017337	PPI
MS.gene009577	MS.gene017318	PPI
MS.gene009577	MS.gene063598	PPI
MS.gene009577	MS.gene25827	PPI
MS.gene009577	MS.gene017321	PPI
MS.gene009577	MS.gene017309	PPI
MS.gene009577	MS.gene062459	PPI
MS.gene064975	MS.gene009577	PPI
MS.gene009577	MS.gene53617	PPI
MS.gene009577	MS.gene009570	PPI
MS.gene009577	MS.gene017316	PPI
MS.gene009577	MS.gene025072	PPI
MS.gene73973	MS.gene009577	PPI
MS.gene009577	MS.gene063581	PPI
MS.gene009577	MS.gene68940	PPI
MS.gene009577	MS.gene92429	PPI
MS.gene009577	MS.gene009573	PPI
MS.gene009577	MS.gene81807	PPI
MS.gene012651	MS.gene009577	PPI
MS.gene009577	MS.gene64288	PPI
MS.gene009577	MS.gene92430	PPI
MS.gene009577	MS.gene009562	PPI
MS.gene009577	MS.gene063589	PPI
MS.gene009577	MS.gene037087	PPI
MS.gene009577	MS.gene92435	PPI
MS.gene009577	MS.gene042174	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009577.t1	MTR_5g076660	82.558	344	43	2	1	327	1	344	0.0	550
MS.gene009577.t1	MTR_5g067400	62.258	310	101	4	24	319	4	311	1.66e-123	357
MS.gene009577.t1	MTR_1g046650	61.736	311	102	4	23	319	3	310	1.06e-121	352
MS.gene009577.t1	MTR_7g024290	62.662	308	102	3	24	318	4	311	1.65e-121	352
MS.gene009577.t1	MTR_1g046650	61.661	313	103	4	23	321	34	343	1.94e-121	353
MS.gene009577.t1	MTR_2g038430	56.548	336	119	4	8	317	2	336	9.33e-121	351
MS.gene009577.t1	MTR_5g076370	58.308	331	122	2	7	321	9	339	1.38e-119	348
MS.gene009577.t1	MTR_1g046640	61.290	310	107	4	24	321	4	312	4.31e-119	346
MS.gene009577.t1	MTR_2g038420	55.758	330	127	3	8	319	2	330	3.67e-114	334
MS.gene009577.t1	MTR_7g094390	55.385	325	133	1	7	319	148	472	2.11e-111	332
MS.gene009577.t1	MTR_5g076720	54.545	330	135	1	7	321	58	387	9.37e-111	327
MS.gene009577.t1	MTR_5g076520	56.090	312	121	2	24	319	4	315	8.42e-109	320
MS.gene009577.t1	MTR_5g061290	54.517	321	124	4	20	321	7	324	2.08e-107	317
MS.gene009577.t1	MTR_1g046650	61.034	290	96	4	46	321	26	312	4.15e-107	315
MS.gene009577.t1	MTR_5g076810	59.023	266	96	3	69	321	2	267	1.10e-91	275
MS.gene009577.t1	MTR_5g076540	63.677	223	81	0	24	246	4	226	9.86e-91	271
MS.gene009577.t1	MTR_5g076505	52.595	289	120	2	47	319	23	310	1.36e-90	273
MS.gene009577.t1	MTR_5g076820	64.651	215	75	1	32	246	20	233	2.22e-89	270
MS.gene009577.t1	MTR_1g046650	59.350	246	83	4	90	321	1	243	2.79e-85	257
MS.gene009577.t1	MTR_4g094468	46.586	249	117	2	15	248	66	313	4.44e-71	224
MS.gene009577.t1	MTR_5g077020	61.111	180	58	3	78	249	22	197	9.29e-64	201
MS.gene009577.t1	MTR_4g058025	71.304	115	32	1	101	214	14	128	8.06e-48	159
MS.gene009577.t1	MTR_7g085590	29.864	221	137	4	12	228	47	253	1.77e-26	106
MS.gene009577.t1	MTR_1g054335	26.522	230	153	5	10	229	43	266	4.67e-22	94.7
MS.gene009577.t1	MTR_8g038370	27.083	240	159	5	6	229	81	320	8.64e-22	94.7
MS.gene009577.t1	MTR_7g093600	26.724	232	158	5	9	229	37	267	3.65e-21	92.4
MS.gene009577.t1	MTR_3g017590	26.360	239	160	5	7	229	23	261	5.51e-21	91.7
MS.gene009577.t1	MTR_3g091510	28.365	208	139	4	32	229	61	268	2.25e-20	90.5
MS.gene009577.t1	MTR_1g008120	27.404	208	141	4	32	229	69	276	3.98e-19	87.0
MS.gene009577.t1	MTR_8g027520	27.404	208	141	4	32	229	45	252	4.18e-19	86.7
MS.gene009577.t1	MTR_8g027520	27.404	208	141	4	32	229	54	261	4.23e-19	86.7
MS.gene009577.t1	MTR_7g117415	25.455	220	154	4	20	229	50	269	1.74e-17	82.0
MS.gene009577.t1	MTR_5g092700	67.347	49	16	0	273	321	25	73	1.07e-13	68.2
MS.gene009577.t1	MTR_4g073580	67.347	49	16	0	273	321	25	73	1.07e-13	68.2
MS.gene009577.t1	MTR_4g073580	67.347	49	16	0	273	321	25	73	2.88e-13	67.8
MS.gene009577.t1	MTR_7g105080	67.347	49	16	0	273	321	25	73	3.79e-13	65.9
MS.gene009577.t1	MTR_3g092130	67.347	49	16	0	273	321	25	73	3.79e-13	65.9
MS.gene009577.t1	MTR_1g059690	67.347	49	16	0	273	321	25	73	3.79e-13	65.9
MS.gene009577.t1	MTR_8g088060	67.347	49	16	0	273	321	25	73	3.91e-13	66.6
MS.gene009577.t1	MTR_5g033960	67.347	49	16	0	273	321	25	73	3.94e-13	66.6
MS.gene009577.t1	MTR_4g088485	67.347	49	16	0	273	321	25	73	4.63e-13	67.8
MS.gene009577.t1	MTR_4g088485	67.347	49	16	0	273	321	162	210	4.63e-13	67.8
MS.gene009577.t1	MTR_1g066390	67.347	49	16	0	273	321	25	73	5.10e-13	68.2
MS.gene009577.t1	MTR_1g066390	67.347	49	16	0	273	321	101	149	5.10e-13	68.2
MS.gene009577.t1	MTR_1g066390	67.347	49	16	0	273	321	177	225	5.10e-13	68.2
MS.gene009577.t1	MTR_5g061310	63.830	47	17	0	273	319	26	72	5.38e-13	63.9
MS.gene009577.t1	MTR_7g116360	67.347	49	16	0	273	321	25	73	5.91e-13	67.8
MS.gene009577.t1	MTR_7g116360	67.347	49	16	0	273	321	101	149	5.91e-13	67.8
MS.gene009577.t1	MTR_7g116360	67.347	49	16	0	273	321	177	225	5.91e-13	67.8
MS.gene009577.t1	MTR_8g479250	67.347	49	16	0	273	321	165	213	7.04e-13	68.6
MS.gene009577.t1	MTR_8g479250	67.391	46	15	0	274	319	231	276	1.08e-11	65.1
MS.gene009577.t1	MTR_3g092130	67.347	49	16	0	273	321	25	73	9.31e-13	65.1
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	25	73	1.03e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	101	149	1.03e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	177	225	1.03e-12	67.8
MS.gene009577.t1	MTR_6g061930	67.347	49	16	0	273	321	25	73	1.09e-12	67.8
MS.gene009577.t1	MTR_6g061930	67.347	49	16	0	273	321	101	149	1.09e-12	67.8
MS.gene009577.t1	MTR_6g061930	67.347	49	16	0	273	321	238	286	1.09e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	25	73	1.30e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	101	149	1.30e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	177	225	1.30e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	253	301	1.30e-12	67.8
MS.gene009577.t1	MTR_7g116360	67.347	49	16	0	273	321	73	121	1.40e-12	67.4
MS.gene009577.t1	MTR_7g116360	67.347	49	16	0	273	321	149	197	1.40e-12	67.4
MS.gene009577.t1	MTR_7g116360	67.347	49	16	0	273	321	225	273	1.40e-12	67.4
MS.gene009577.t1	MTR_4g080920	65.306	49	17	0	273	321	101	149	1.62e-12	66.6
MS.gene009577.t1	MTR_4g080920	65.306	49	17	0	273	321	25	73	3.21e-12	65.9
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	25	73	1.68e-12	67.0
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	101	149	1.68e-12	67.0
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	177	225	1.68e-12	67.0
MS.gene009577.t1	MTR_8g081020	67.347	49	16	0	273	321	25	73	1.90e-12	67.8
MS.gene009577.t1	MTR_8g081020	67.347	49	16	0	273	321	101	149	1.90e-12	67.8
MS.gene009577.t1	MTR_8g081020	67.347	49	16	0	273	321	177	225	1.90e-12	67.8
MS.gene009577.t1	MTR_8g081020	67.347	49	16	0	273	321	253	301	1.90e-12	67.8
MS.gene009577.t1	MTR_8g081020	67.347	49	16	0	273	321	329	377	1.90e-12	67.8
MS.gene009577.t1	MTR_4g091580	67.347	49	16	0	273	321	25	73	1.95e-12	67.8
MS.gene009577.t1	MTR_4g091580	67.347	49	16	0	273	321	101	149	1.95e-12	67.8
MS.gene009577.t1	MTR_4g091580	67.347	49	16	0	273	321	177	225	1.95e-12	67.8
MS.gene009577.t1	MTR_4g091580	67.347	49	16	0	273	321	329	377	1.95e-12	67.8
MS.gene009577.t1	MTR_4g091580	65.306	49	17	0	273	321	253	301	6.21e-12	66.2
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	25	73	1.95e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	101	149	1.95e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	177	225	1.95e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	253	301	1.95e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	329	377	1.95e-12	67.8
MS.gene009577.t1	MTR_4g080797	67.347	49	16	0	273	321	25	73	2.01e-12	67.8
MS.gene009577.t1	MTR_4g080797	67.347	49	16	0	273	321	101	149	2.01e-12	67.8
MS.gene009577.t1	MTR_4g080797	67.347	49	16	0	273	321	177	225	2.01e-12	67.8
MS.gene009577.t1	MTR_4g080797	67.347	49	16	0	273	321	253	301	2.01e-12	67.8
MS.gene009577.t1	MTR_4g080797	67.347	49	16	0	273	321	329	377	2.01e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	25	73	2.01e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	101	149	2.01e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	177	225	2.01e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	253	301	2.01e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	329	377	2.01e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	25	73	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	101	149	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	177	225	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	253	301	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	329	377	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	405	453	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	25	73	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	101	149	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	177	225	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	253	301	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	329	377	2.38e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	405	453	2.38e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	25	73	2.62e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	101	149	2.62e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	177	225	2.62e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	253	301	2.62e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	329	377	2.62e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	405	453	2.62e-12	67.8
MS.gene009577.t1	MTR_4g081010	67.347	49	16	0	273	321	481	529	2.62e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	25	73	2.62e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	101	149	2.62e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	177	225	2.62e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	253	301	2.62e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	329	377	2.62e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	405	453	2.62e-12	67.8
MS.gene009577.t1	MTR_8g018230	67.347	49	16	0	273	321	481	529	2.62e-12	67.8
MS.gene009577.t1	MTR_4g091580	67.347	49	16	0	273	321	25	73	2.64e-12	67.8
MS.gene009577.t1	MTR_4g091580	67.347	49	16	0	273	321	101	149	2.64e-12	67.8
MS.gene009577.t1	MTR_4g091580	67.347	49	16	0	273	321	177	225	2.64e-12	67.8
MS.gene009577.t1	MTR_4g091580	67.347	49	16	0	273	321	253	301	2.64e-12	67.8
MS.gene009577.t1	MTR_4g091580	67.347	49	16	0	273	321	405	453	2.64e-12	67.8
MS.gene009577.t1	MTR_4g091580	67.347	49	16	0	273	321	481	529	2.64e-12	67.8
MS.gene009577.t1	MTR_4g091580	65.306	49	17	0	273	321	329	377	2.27e-11	65.1
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	101	149	3.26e-12	67.8
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	177	225	3.26e-12	67.8
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	253	301	3.26e-12	67.8
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	329	377	3.26e-12	67.8
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	405	453	3.26e-12	67.8
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	481	529	3.26e-12	67.8
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	557	605	3.26e-12	67.8
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	633	681	3.26e-12	67.8
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	709	757	3.26e-12	67.8
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	785	833	3.26e-12	67.8
MS.gene009577.t1	MTR_4g088495	67.347	49	16	0	273	321	25	73	5.27e-12	67.4
MS.gene009577.t1	MTR_5g076750	50.000	58	29	0	262	319	6	63	2.82e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009577.t1	AT5G37930	38.428	229	140	1	24	251	103	331	1.58e-49	169
MS.gene009577.t1	AT5G37870	33.610	241	151	7	12	244	21	260	7.78e-38	136
MS.gene009577.t1	AT5G37890	34.314	204	129	3	12	210	27	230	2.01e-36	133
MS.gene009577.t1	AT1G66650	34.579	214	133	3	23	229	75	288	1.07e-33	127
MS.gene009577.t1	AT1G66630	36.264	182	111	2	23	199	38	219	4.22e-32	122
MS.gene009577.t1	AT1G66620	35.714	168	107	1	32	199	42	208	4.01e-30	117
MS.gene009577.t1	AT5G37910	30.964	197	132	1	11	203	15	211	5.22e-29	113
MS.gene009577.t1	AT5G62800	35.602	191	118	3	18	203	27	217	2.27e-28	112
MS.gene009577.t1	AT5G62800	35.602	191	118	3	18	203	27	217	2.39e-28	112
MS.gene009577.t1	AT1G66660	41.322	121	71	0	19	139	91	211	2.27e-25	104
MS.gene009577.t1	AT3G61790	27.885	208	140	4	32	229	61	268	2.06e-19	87.8
MS.gene009577.t1	AT3G58040	25.962	208	144	4	32	229	58	265	1.49e-18	85.1
MS.gene009577.t1	AT3G58040	25.962	208	144	4	32	229	58	265	1.49e-18	85.1
MS.gene009577.t1	AT4G27880	26.923	208	142	4	32	229	62	269	1.50e-18	85.5
MS.gene009577.t1	AT2G41980	25.481	208	145	4	32	229	55	262	2.48e-18	84.3
MS.gene009577.t1	AT3G58040	31.061	132	88	2	32	160	58	189	3.47e-16	76.6
MS.gene009577.t1	AT2G35635	67.347	49	16	0	273	321	25	73	1.17e-13	68.2
MS.gene009577.t1	AT1G31340	67.347	49	16	0	273	321	25	73	1.25e-13	68.2
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	25	73	1.63e-13	67.8
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	101	149	1.63e-13	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	25	73	1.63e-13	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	101	149	1.63e-13	67.8
MS.gene009577.t1	AT1G55060	69.388	49	15	0	273	321	101	149	2.17e-13	68.9
MS.gene009577.t1	AT1G55060	67.347	49	16	0	273	321	177	225	1.57e-12	66.6
MS.gene009577.t1	AT1G23410	67.347	49	16	0	273	321	25	73	2.24e-13	67.4
MS.gene009577.t1	AT2G47110	67.347	49	16	0	273	321	25	73	2.88e-13	67.0
MS.gene009577.t1	AT2G47110	67.347	49	16	0	273	321	25	73	2.88e-13	67.0
MS.gene009577.t1	AT1G66610	27.717	184	118	6	66	244	161	334	3.14e-13	70.1
MS.gene009577.t1	AT3G62250	67.347	49	16	0	273	321	25	73	3.17e-13	67.0
MS.gene009577.t1	AT3G52590	67.347	49	16	0	273	321	25	73	4.05e-13	65.9
MS.gene009577.t1	AT2G36170	67.347	49	16	0	273	321	25	73	4.05e-13	65.9
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	25	73	6.19e-13	67.8
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	101	149	6.19e-13	67.8
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	177	225	6.19e-13	67.8
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	25	73	6.19e-13	67.8
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	101	149	6.19e-13	67.8
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	177	225	6.19e-13	67.8
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	25	73	6.19e-13	67.8
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	101	149	6.19e-13	67.8
MS.gene009577.t1	AT4G05050	67.347	49	16	0	273	321	177	225	6.19e-13	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	25	73	6.19e-13	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	101	149	6.19e-13	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	177	225	6.19e-13	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	25	73	6.19e-13	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	101	149	6.19e-13	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	177	225	6.19e-13	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	25	73	1.33e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	101	149	1.33e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	177	225	1.33e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	253	301	1.33e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	25	73	1.33e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	101	149	1.33e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	177	225	1.33e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	253	301	1.33e-12	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	25	73	1.33e-12	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	101	149	1.33e-12	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	177	225	1.33e-12	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	253	301	1.33e-12	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	25	73	1.33e-12	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	101	149	1.33e-12	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	177	225	1.33e-12	67.8
MS.gene009577.t1	AT4G02890	67.347	49	16	0	273	321	253	301	1.33e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	25	73	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	101	149	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	177	225	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	253	301	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	25	73	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	101	149	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	177	225	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	253	301	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	25	73	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	101	149	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	177	225	1.34e-12	67.8
MS.gene009577.t1	AT5G03240	67.347	49	16	0	273	321	253	301	1.34e-12	67.8
MS.gene009577.t1	AT5G20620	67.347	49	16	0	273	321	25	73	1.34e-12	67.8
MS.gene009577.t1	AT5G20620	67.347	49	16	0	273	321	101	149	1.34e-12	67.8
MS.gene009577.t1	AT5G20620	67.347	49	16	0	273	321	177	225	1.34e-12	67.8
MS.gene009577.t1	AT5G20620	67.347	49	16	0	273	321	253	301	1.34e-12	67.8
MS.gene009577.t1	AT1G65350	67.347	49	16	0	273	321	25	73	1.64e-12	67.8
MS.gene009577.t1	AT1G65350	67.347	49	16	0	273	321	176	224	1.84e-12	67.4
MS.gene009577.t1	AT5G20620	67.347	49	16	0	273	321	25	73	2.00e-12	67.8
MS.gene009577.t1	AT5G20620	67.347	49	16	0	273	321	101	149	2.00e-12	67.8
MS.gene009577.t1	AT5G20620	67.347	49	16	0	273	321	177	225	2.00e-12	67.8
MS.gene009577.t1	AT5G20620	67.347	49	16	0	273	321	253	301	2.00e-12	67.8
MS.gene009577.t1	AT5G20620	67.347	49	16	0	273	321	329	377	2.00e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	25	73	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	101	149	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	177	225	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	253	301	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	329	377	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	25	73	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	101	149	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	177	225	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	253	301	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	329	377	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	25	73	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	101	149	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	177	225	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	253	301	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	329	377	2.10e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	25	73	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	101	149	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	177	225	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	253	301	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	329	377	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	405	453	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	25	73	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	101	149	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	177	225	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	253	301	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	329	377	2.49e-12	67.8
MS.gene009577.t1	AT4G05320	67.347	49	16	0	273	321	405	453	2.49e-12	67.8
MS.gene009577.t1	AT5G37640	67.347	49	16	0	273	321	179	227	3.38e-12	66.6
MS.gene009577.t1	AT5G37640	65.306	49	17	0	273	321	103	151	6.98e-12	65.9
MS.gene009577.t1	AT5G37640	66.000	50	16	1	273	321	255	304	5.51e-11	63.2
MS.gene009577.t1	AT5G37900	26.768	198	129	5	66	252	35	227	1.10e-11	64.3
MS.gene009577.t1	AT3G09790	65.306	49	17	0	273	321	27	75	1.85e-11	65.5
MS.gene009577.t1	AT3G09790	65.306	49	17	0	273	321	103	151	6.79e-11	63.5
MS.gene009577.t1	AT3G09790	65.306	49	17	0	273	321	27	75	1.85e-11	65.5
MS.gene009577.t1	AT3G09790	65.306	49	17	0	273	321	103	151	6.79e-11	63.5
MS.gene009577.t1	AT1G66660	42.857	63	36	0	77	139	25	87	4.03e-11	62.4
MS.gene009577.t1	AT1G53930	65.217	46	16	0	273	318	110	155	4.78e-11	60.8

Find 76 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCATGTTACTGTCCCCTTTC+AGG	0.113751	5.3:+61862967	MS.gene009577:CDS
ATGCAGCAATCAAATGAATT+TGG	0.124835	5.3:-61862251	None:intergenic
GGCTTCGTCATTAGAATTTA+AGG	0.131683	5.3:-61863091	None:intergenic
GTGATTCCATTTGGTCATTT+TGG	0.170097	5.3:+61863336	MS.gene009577:CDS
TTCGAGAATCCTTGTGCTTA+TGG	0.260266	5.3:-61863035	None:intergenic
GTAACGCATTGGACATTCTT+TGG	0.264562	5.3:-61863285	None:intergenic
TGTATGAACTCTCCACCTTC+AGG	0.305829	5.3:-61863743	None:intergenic
GCAGTCAGCCAGTTCCTTAC+TGG	0.319000	5.3:-61863837	None:intergenic
CAATAATAGTATTGTGAGTC+TGG	0.323771	5.3:+61863155	MS.gene009577:CDS
CTTGAGTATCCCCGTGTTCC+AGG	0.328217	5.3:+61862286	MS.gene009577:CDS
GTTGCAATTCAGTGTGTTAA+TGG	0.346811	5.3:+61862742	MS.gene009577:intron
TTCTAGGGTAATTATCTTGA+TGG	0.355371	5.3:-61863935	None:intergenic
CTTCTCTTGGATGTTGTAAT+GGG	0.372391	5.3:-61863870	None:intergenic
ACTTCTCTTGGATGTTGTAA+TGG	0.386706	5.3:-61863871	None:intergenic
TGCAGCAATCAAATGAATTT+GGG	0.405599	5.3:-61862250	None:intergenic
GTGCTTATGGCTGAAATGAT+TGG	0.408720	5.3:-61863022	None:intergenic
TGTTGTAATGGGCAAGGGTC+TGG	0.428420	5.3:-61863859	None:intergenic
CTAAGCAGAGGATGAGGTTG+AGG	0.438053	5.3:-61863898	None:intergenic
AACAAAGTCGCAGCCTGAAA+GGG	0.438646	5.3:-61862980	None:intergenic
AAGTTCCTCGTGATTCCATT+TGG	0.446816	5.3:+61863327	MS.gene009577:CDS
GGGTAATTATCTTGATGGTA+AGG	0.447621	5.3:-61863930	None:intergenic
GCGGTATCAGTATGATATAT+TGG	0.450936	5.3:+61863224	MS.gene009577:CDS
CAAACTACATATTTGAGACT+TGG	0.452125	5.3:-61863247	None:intergenic
TTATCTTGATGGTAAGGGTC+TGG	0.452496	5.3:-61863924	None:intergenic
CTTGGATGTTGTAATGGGCA+AGG	0.467483	5.3:-61863865	None:intergenic
TGGCAAAGATCAGACGTTGC+TGG	0.474453	5.3:-61863817	None:intergenic
GAAGAACCAAAATGACCAAA+TGG	0.476071	5.3:-61863342	None:intergenic
GATCTTTGCCAGTAAGGAAC+TGG	0.476441	5.3:+61863829	MS.gene009577:CDS
TACATGCATACCTGGAACAC+GGG	0.486833	5.3:-61862296	None:intergenic
GGTTGAGGGTAGACTTCTCT+TGG	0.488085	5.3:-61863883	None:intergenic
GTATGAACTCTCCACCTTCA+GGG	0.491719	5.3:-61863742	None:intergenic
GTCATTAGAATTTAAGGAGA+CGG	0.492503	5.3:-61863085	None:intergenic
CTCAACCTCATCCTCTGCTT+AGG	0.505399	5.3:+61863899	MS.gene009577:CDS
CATACACGATAGCAACTTGA+AGG	0.516306	5.3:+61863760	MS.gene009577:CDS
ACGTCTGATCTTTGCCAGTA+AGG	0.518196	5.3:+61863823	MS.gene009577:CDS
GCGGTCAGTATTAGCTGCAT+TGG	0.518512	5.3:+61863183	MS.gene009577:CDS
ATCTTCATAAAGTCCTTGAC+TGG	0.520072	5.3:+61863708	MS.gene009577:CDS
GTTCCGATGTTTATCACAGC+AGG	0.526195	5.3:-61862782	None:intergenic
TTTCTCATTAACATCTTCTG+AGG	0.529895	5.3:-61862201	None:intergenic
CGAAGCCATTGTTCTTCAAG+AGG	0.531922	5.3:+61863107	MS.gene009577:CDS
TTGGATGTTGTAATGGGCAA+GGG	0.532446	5.3:-61863864	None:intergenic
GTCAAATGTTCTAATGGAGA+CGG	0.536935	5.3:+61862154	None:intergenic
AATAATAGTATTGTGAGTCT+GGG	0.537905	5.3:+61863156	MS.gene009577:CDS
TACCGCGGCTCAGAATAGTT+AGG	0.541372	5.3:-61863207	None:intergenic
GGTAATTATCTTGATGGTAA+GGG	0.541541	5.3:-61863929	None:intergenic
CAACAAAGTCGCAGCCTGAA+AGG	0.542197	5.3:-61862981	None:intergenic
CGACTTTGTTGCCTCATCAG+AGG	0.542866	5.3:+61862993	MS.gene009577:CDS
AGATTGCAATAGATTCTCAA+TGG	0.544055	5.3:-61862851	None:intergenic
TGGAGCCTAAGCAGAGGATG+AGG	0.559913	5.3:-61863904	None:intergenic
CTGGAACACGGGGATACTCA+AGG	0.567225	5.3:-61862285	None:intergenic
CCTGAAAGGGGACAGTAACA+TGG	0.568590	5.3:-61862967	None:intergenic
TAAGCAGAGGATGAGGTTGA+GGG	0.570671	5.3:-61863897	None:intergenic
TATGAACTCTCCACCTTCAG+GGG	0.572938	5.3:-61863741	None:intergenic
AGAATTTAAGGAGACGGTGA+AGG	0.577300	5.3:-61863079	None:intergenic
GAGCTGCTAAAGTAACGCAT+TGG	0.577945	5.3:-61863296	None:intergenic
TCAAATGTTCTAATGGAGAC+GGG	0.579956	5.3:+61862155	None:intergenic
AACATCTTCTGAGGAATCAA+CGG	0.588452	5.3:-61862192	None:intergenic
ACATTCCTCTTGAAGAACAA+TGG	0.597159	5.3:-61863112	None:intergenic
ACAAAGTCGCAGCCTGAAAG+GGG	0.599976	5.3:-61862979	None:intergenic
GGGGATCGTCTTTCCAGTCA+AGG	0.603346	5.3:-61863721	None:intergenic
TGGAACACGGGGATACTCAA+GGG	0.606487	5.3:-61862284	None:intergenic
GCAATCAAATGAATTTGGGT+CGG	0.614158	5.3:-61862246	None:intergenic
GTTCTTCAAGAGGAATGTGT+CGG	0.620587	5.3:+61863117	MS.gene009577:CDS
TCATTTCAGCCATAAGCACA+AGG	0.622731	5.3:+61863026	MS.gene009577:CDS
ATTGGACAACACCTCTGATG+AGG	0.627180	5.3:-61863004	None:intergenic
AATATATCATACTGATACCG+CGG	0.628028	5.3:-61863222	None:intergenic
TATTGTGAGTCTGGGAAATG+CGG	0.641228	5.3:+61863164	MS.gene009577:CDS
GTCCTAACTATTCTGAGCCG+CGG	0.645221	5.3:+61863205	MS.gene009577:CDS
TTACATGCATACCTGGAACA+CGG	0.650186	5.3:-61862297	None:intergenic
CTACCTGCTGTGATAAACAT+CGG	0.655948	5.3:+61862779	MS.gene009577:CDS
GAAGGCGAAGATTCGAGACA+AGG	0.661663	5.3:+61863778	MS.gene009577:CDS
ATGAACTCTCCACCTTCAGG+GGG	0.671543	5.3:-61863740	None:intergenic
ACATGCATACCTGGAACACG+GGG	0.681082	5.3:-61862295	None:intergenic
AGACAAGGAAAGAATCTCAG+TGG	0.687621	5.3:+61863793	MS.gene009577:CDS
AGGGTCTGGAGCCTAAGCAG+AGG	0.693063	5.3:-61863910	None:intergenic
AATGACCAAATGGAATCACG+AGG	0.761489	5.3:-61863332	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTAATGATAGTAATTTTT+TGG	+	chr5.3:61862331-61862350	MS.gene009577:intron	10.0%
!!!	TTTATTAGTGATTAATTTGT+TGG	+	chr5.3:61863665-61863684	MS.gene009577:intron	15.0%
!!!	TTCTAGAGTATTAATTCAAA+AGG	-	chr5.3:61863474-61863493	None:intergenic	20.0%
!!!	TTTTGCTCAAAAATATGTAA+AGG	-	chr5.3:61862478-61862497	None:intergenic	20.0%
!	AAACGACCAAATTAATGAAA+AGG	-	chr5.3:61863421-61863440	None:intergenic	25.0%
!	AATAATAGTATTGTGAGTCT+GGG	+	chr5.3:61863156-61863175	MS.gene009577:CDS	25.0%
!	CATACATACTGCATAAAATA+TGG	-	chr5.3:61862379-61862398	None:intergenic	25.0%
!	CCTTATACTTAACGAAAAAT+TGG	+	chr5.3:61862423-61862442	MS.gene009577:intron	25.0%
!	TAAGTAATAACTTCTTTCGA+AGG	-	chr5.3:61862664-61862683	None:intergenic	25.0%
!!	CCAATTTTTCGTTAAGTATA+AGG	-	chr5.3:61862426-61862445	None:intergenic	25.0%
!!	TTAATATTTCTGTTATCCTG+TGG	+	chr5.3:61862529-61862548	MS.gene009577:intron	25.0%
!!!	AAAGGAGTATCAAGATTTTT+TGG	-	chr5.3:61862460-61862479	None:intergenic	25.0%
!!!	GATTTTTGTTTTCTTTCTCA+TGG	+	chr5.3:61863641-61863660	MS.gene009577:intron	25.0%
	AAAACACTAACAACCTTCTT+TGG	-	chr5.3:61863529-61863548	None:intergenic	30.0%
	AATATATCATACTGATACCG+CGG	-	chr5.3:61863225-61863244	None:intergenic	30.0%
	AATTTGAGAATCATGGAGTT+TGG	+	chr5.3:61862499-61862518	MS.gene009577:intron	30.0%
	AGATTGCAATAGATTCTCAA+TGG	-	chr5.3:61862854-61862873	None:intergenic	30.0%
	ATGCAGCAATCAAATGAATT+TGG	-	chr5.3:61862254-61862273	None:intergenic	30.0%
	ATTAATGAAAAGGAGGAGAT+AGG	-	chr5.3:61863411-61863430	None:intergenic	30.0%
	CAATAATAGTATTGTGAGTC+TGG	+	chr5.3:61863155-61863174	MS.gene009577:CDS	30.0%
	GCAAAACAATTTGAGAATCA+TGG	+	chr5.3:61862492-61862511	MS.gene009577:intron	30.0%
	GTCATTAGAATTTAAGGAGA+CGG	-	chr5.3:61863088-61863107	None:intergenic	30.0%
	TAACAATTTACATGCATACC+TGG	-	chr5.3:61862307-61862326	None:intergenic	30.0%
	TGATTTGATACTGATATCTC+AGG	-	chr5.3:61863578-61863597	None:intergenic	30.0%
	TGCAGCAATCAAATGAATTT+GGG	-	chr5.3:61862253-61862272	None:intergenic	30.0%
	TTATGCAGTATGTATGTTTC+TGG	+	chr5.3:61862383-61862402	MS.gene009577:intron	30.0%
	TTTCTCATTAACATCTTCTG+AGG	-	chr5.3:61862204-61862223	None:intergenic	30.0%
	TTTGAGCTAGAAAATTAGAC+AGG	-	chr5.3:61862557-61862576	None:intergenic	30.0%
!	CAAACTACATATTTGAGACT+TGG	-	chr5.3:61863250-61863269	None:intergenic	30.0%
!	GTTTTCTTAAATGCCAAAGA+AGG	+	chr5.3:61863513-61863532	MS.gene009577:intron	30.0%
!	TCTCCTCCTTTTCATTAATT+TGG	+	chr5.3:61863412-61863431	MS.gene009577:intron	30.0%
!!!	TAATTTTTTGGCTCTGAGAA+TGG	+	chr5.3:61862343-61862362	MS.gene009577:intron	30.0%
	AATAGCATGTTATGCAGGTA+AGG	-	chr5.3:61862633-61862652	None:intergenic	35.0%
	ACATTCCTCTTGAAGAACAA+TGG	-	chr5.3:61863115-61863134	None:intergenic	35.0%
	ACTTCTCTTGGATGTTGTAA+TGG	-	chr5.3:61863874-61863893	None:intergenic	35.0%
	ATCTTCATAAAGTCCTTGAC+TGG	+	chr5.3:61863708-61863727	MS.gene009577:CDS	35.0%
	CGACCAAATTAATGAAAAGG+AGG	-	chr5.3:61863418-61863437	None:intergenic	35.0%
	CTTCTCTTGGATGTTGTAAT+GGG	-	chr5.3:61863873-61863892	None:intergenic	35.0%
	GAAGAACCAAAATGACCAAA+TGG	-	chr5.3:61863345-61863364	None:intergenic	35.0%
	GCAATCAAATGAATTTGGGT+CGG	-	chr5.3:61862249-61862268	None:intergenic	35.0%
	GCGGTATCAGTATGATATAT+TGG	+	chr5.3:61863224-61863243	MS.gene009577:CDS	35.0%
	GGCTTCGTCATTAGAATTTA+AGG	-	chr5.3:61863094-61863113	None:intergenic	35.0%
	GTTGCAATTCAGTGTGTTAA+TGG	+	chr5.3:61862742-61862761	MS.gene009577:intron	35.0%
	TCATGCCTGAATGAAAAACA+TGG	+	chr5.3:61862883-61862902	MS.gene009577:CDS	35.0%
!	AACATCTTCTGAGGAATCAA+CGG	-	chr5.3:61862195-61862214	None:intergenic	35.0%
!	GTGATTCCATTTGGTCATTT+TGG	+	chr5.3:61863336-61863355	MS.gene009577:CDS	35.0%
!	TCTCGAAGCACATTTTCTTA+TGG	+	chr5.3:61863051-61863070	MS.gene009577:CDS	35.0%
	AACCTTTACTGCAGTACAAC+AGG	-	chr5.3:61863615-61863634	None:intergenic	40.0%
	AAGTTCCTCGTGATTCCATT+TGG	+	chr5.3:61863327-61863346	MS.gene009577:CDS	40.0%
	AATGAAAAGGAGGAGATAGG+AGG	-	chr5.3:61863408-61863427	None:intergenic	40.0%
	AATGACCAAATGGAATCACG+AGG	-	chr5.3:61863335-61863354	None:intergenic	40.0%
	ACCTTTACTGCAGTACAACA+GGG	-	chr5.3:61863614-61863633	None:intergenic	40.0%
	AGAAATTTGCATAACCCCCA+AGG	+	chr5.3:61863380-61863399	MS.gene009577:intron	40.0%
	AGAATTTAAGGAGACGGTGA+AGG	-	chr5.3:61863082-61863101	None:intergenic	40.0%
	AGACAAGGAAAGAATCTCAG+TGG	+	chr5.3:61863793-61863812	MS.gene009577:CDS	40.0%
	CATACACGATAGCAACTTGA+AGG	+	chr5.3:61863760-61863779	MS.gene009577:CDS	40.0%
	CTACCTGCTGTGATAAACAT+CGG	+	chr5.3:61862779-61862798	MS.gene009577:CDS	40.0%
	CTAGCAATAGCATGTTATGC+AGG	-	chr5.3:61862638-61862657	None:intergenic	40.0%
	GAATGAAAAACATGGCTGCA+AGG	+	chr5.3:61862891-61862910	MS.gene009577:CDS	40.0%
	GTAACGCATTGGACATTCTT+TGG	-	chr5.3:61863288-61863307	None:intergenic	40.0%
	GTGCTTATGGCTGAAATGAT+TGG	-	chr5.3:61863025-61863044	None:intergenic	40.0%
	GTTATGCAGGTAAGGTAAGA+GGG	-	chr5.3:61862625-61862644	None:intergenic	40.0%
	GTTCTTCAAGAGGAATGTGT+CGG	+	chr5.3:61863117-61863136	MS.gene009577:CDS	40.0%
	TACTGCAGTAAAGGTTGCAA+TGG	+	chr5.3:61863619-61863638	MS.gene009577:intron	40.0%
	TATTGTGAGTCTGGGAAATG+CGG	+	chr5.3:61863164-61863183	MS.gene009577:CDS	40.0%
	TCATTTCAGCCATAAGCACA+AGG	+	chr5.3:61863026-61863045	MS.gene009577:CDS	40.0%
	TGTTATGCAGGTAAGGTAAG+AGG	-	chr5.3:61862626-61862645	None:intergenic	40.0%
	TTACATGCATACCTGGAACA+CGG	-	chr5.3:61862300-61862319	None:intergenic	40.0%
	TTCGAGAATCCTTGTGCTTA+TGG	-	chr5.3:61863038-61863057	None:intergenic	40.0%
!	TGCAGCCATGTTTTTCATTC+AGG	-	chr5.3:61862891-61862910	None:intergenic	40.0%
!	TTATCTTGATGGTAAGGGTC+TGG	-	chr5.3:61863927-61863946	None:intergenic	40.0%
!!	CGAATGCGTTTTGAGCATTT+AGG	-	chr5.3:61862814-61862833	None:intergenic	40.0%
!!	TTGGATGTTGTAATGGGCAA+GGG	-	chr5.3:61863867-61863886	None:intergenic	40.0%
	AACAAAGTCGCAGCCTGAAA+GGG	-	chr5.3:61862983-61863002	None:intergenic	45.0%
	ACCCTGTTGTACTGCAGTAA+AGG	+	chr5.3:61863610-61863629	MS.gene009577:intron	45.0%
	ACGTCTGATCTTTGCCAGTA+AGG	+	chr5.3:61863823-61863842	MS.gene009577:CDS	45.0%
	ATTGGACAACACCTCTGATG+AGG	-	chr5.3:61863007-61863026	None:intergenic	45.0%
	CGAAGCCATTGTTCTTCAAG+AGG	+	chr5.3:61863107-61863126	MS.gene009577:CDS	45.0%
	GAAAATTAGACAGGCACCAC+AGG	-	chr5.3:61862548-61862567	None:intergenic	45.0%
	GAGCTGCTAAAGTAACGCAT+TGG	-	chr5.3:61863299-61863318	None:intergenic	45.0%
	GATCTTTGCCAGTAAGGAAC+TGG	+	chr5.3:61863829-61863848	MS.gene009577:CDS	45.0%
	GTATGAACTCTCCACCTTCA+GGG	-	chr5.3:61863745-61863764	None:intergenic	45.0%
	GTTCCGATGTTTATCACAGC+AGG	-	chr5.3:61862785-61862804	None:intergenic	45.0%
	TAAGCAGAGGATGAGGTTGA+GGG	-	chr5.3:61863900-61863919	None:intergenic	45.0%
	TACATGCATACCTGGAACAC+GGG	-	chr5.3:61862299-61862318	None:intergenic	45.0%
	TATGAACTCTCCACCTTCAG+GGG	-	chr5.3:61863744-61863763	None:intergenic	45.0%
	TGTATGAACTCTCCACCTTC+AGG	-	chr5.3:61863746-61863765	None:intergenic	45.0%
!!	CTTGGATGTTGTAATGGGCA+AGG	-	chr5.3:61863868-61863887	None:intergenic	45.0%
	ACAAAGTCGCAGCCTGAAAG+GGG	-	chr5.3:61862982-61863001	None:intergenic	50.0%
	ACATGCATACCTGGAACACG+GGG	-	chr5.3:61862298-61862317	None:intergenic	50.0%
	ATGAACTCTCCACCTTCAGG+GGG	-	chr5.3:61863743-61863762	None:intergenic	50.0%
	CAACAAAGTCGCAGCCTGAA+AGG	-	chr5.3:61862984-61863003	None:intergenic	50.0%
	CCATGTTACTGTCCCCTTTC+AGG	+	chr5.3:61862967-61862986	MS.gene009577:CDS	50.0%
	CCTGAAAGGGGACAGTAACA+TGG	-	chr5.3:61862970-61862989	None:intergenic	50.0%
	CGACTTTGTTGCCTCATCAG+AGG	+	chr5.3:61862993-61863012	MS.gene009577:CDS	50.0%
	CTAAGCAGAGGATGAGGTTG+AGG	-	chr5.3:61863901-61863920	None:intergenic	50.0%
	CTCAACCTCATCCTCTGCTT+AGG	+	chr5.3:61863899-61863918	MS.gene009577:CDS	50.0%
	GAAGGCGAAGATTCGAGACA+AGG	+	chr5.3:61863778-61863797	MS.gene009577:CDS	50.0%
	GCGGTCAGTATTAGCTGCAT+TGG	+	chr5.3:61863183-61863202	MS.gene009577:CDS	50.0%
	GGTTGAGGGTAGACTTCTCT+TGG	-	chr5.3:61863886-61863905	None:intergenic	50.0%
	GTCCTAACTATTCTGAGCCG+CGG	+	chr5.3:61863205-61863224	MS.gene009577:CDS	50.0%
	TACCGCGGCTCAGAATAGTT+AGG	-	chr5.3:61863210-61863229	None:intergenic	50.0%
	TGGAACACGGGGATACTCAA+GGG	-	chr5.3:61862287-61862306	None:intergenic	50.0%
	TGGCAAAGATCAGACGTTGC+TGG	-	chr5.3:61863820-61863839	None:intergenic	50.0%
!!	AGGAGATAGGAGGTACCTTG+GGG	-	chr5.3:61863398-61863417	None:intergenic	50.0%
!!	GAGGAGATAGGAGGTACCTT+GGG	-	chr5.3:61863399-61863418	None:intergenic	50.0%
!!	TGTTGTAATGGGCAAGGGTC+TGG	-	chr5.3:61863862-61863881	None:intergenic	50.0%
	AAAGACGATCCCCCTGAAGG+TGG	+	chr5.3:61863731-61863750	MS.gene009577:CDS	55.0%
	CTGGAACACGGGGATACTCA+AGG	-	chr5.3:61862288-61862307	None:intergenic	55.0%
	CTTGAGTATCCCCGTGTTCC+AGG	+	chr5.3:61862286-61862305	MS.gene009577:CDS	55.0%
	GCAGTCAGCCAGTTCCTTAC+TGG	-	chr5.3:61863840-61863859	None:intergenic	55.0%
	GGGGATCGTCTTTCCAGTCA+AGG	-	chr5.3:61863724-61863743	None:intergenic	55.0%
	TGGAAAGACGATCCCCCTGA+AGG	+	chr5.3:61863728-61863747	MS.gene009577:CDS	55.0%
	TGGAGCCTAAGCAGAGGATG+AGG	-	chr5.3:61863907-61863926	None:intergenic	55.0%
!!	GGAGATAGGAGGTACCTTGG+GGG	-	chr5.3:61863397-61863416	None:intergenic	55.0%
!!	GGAGGAGATAGGAGGTACCT+TGG	-	chr5.3:61863400-61863419	None:intergenic	55.0%
!	AGGGTCTGGAGCCTAAGCAG+AGG	-	chr5.3:61863913-61863932	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	61862167	61863946	61862167	ID=MS.gene009577
chr5.3	mRNA	61862167	61863946	61862167	ID=MS.gene009577.t1;Parent=MS.gene009577
chr5.3	exon	61862167	61862307	61862167	ID=MS.gene009577.t1.exon1;Parent=MS.gene009577.t1
chr5.3	CDS	61862167	61862307	61862167	ID=cds.MS.gene009577.t1;Parent=MS.gene009577.t1
chr5.3	exon	61862754	61863357	61862754	ID=MS.gene009577.t1.exon2;Parent=MS.gene009577.t1
chr5.3	CDS	61862754	61863357	61862754	ID=cds.MS.gene009577.t1;Parent=MS.gene009577.t1
chr5.3	exon	61863702	61863946	61863702	ID=MS.gene009577.t1.exon3;Parent=MS.gene009577.t1
chr5.3	CDS	61863702	61863946	61863702	ID=cds.MS.gene009577.t1;Parent=MS.gene009577.t1

Gene Sequence

>MS.gene009577

ATGGAGACGGGTACTGAAGAAGAGACCGTTGATTCCTCAGAAGATGTTAATGAGAAAAATTCTGTTTCTGTGATGATTTCCGACCCAAATTCATTTGATTGCTGCATTTGTTTTCAACCCTTGAGTATCCCCGTGTTCCAGGTATGCATGTAAATTGTTAATTTTTTTAATGATAGTAATTTTTTGGCTCTGAGAATGGTTATTTGTTGCCATATTTTATGCAGTATGTATGTTTCTGGTGATTAAATGTGATATTCCTTATACTTAACGAAAAATTGGTTTTAACTTTACCAAAAAATCTTGATACTCCTTTACATATTTTTGAGCAAAACAATTTGAGAATCATGGAGTTTGGAGAATGATTAATATTTCTGTTATCCTGTGGTGCCTGTCTAATTTTCTAGCTCAAAGAAATCGAGTTCAAATCTCTATTAAAAAAGCATGAACTGATGCATCCCTCTTACCTTACCTGCATAACATGCTATTGCTAGAAGCCTTCGAAAGAAGTTATTACTTATTTTAGTTAATTTTATTGTAGATAATGATTAAGAAGCTAATTTGATGATTTCTTGTATGTTGCAATTCAGTGTGTTAATGGTCATATTGTTTGCTCTACCTGCTGTGATAAACATCGGAACAAGTGTCCTAAATGCTCAAAACGCATTCGCTTTAAACGTTGTAAAGCCATTGAGAATCTATTGCAATCTTTCAAAATGTCATGCCTGAATGAAAAACATGGCTGCAAGGAGACAATGCGTTACAATGAGAAGAAGAAGCATGAAGAAGAATGTATGTATGTTCCATGTTACTGTCCCCTTTCAGGCTGCGACTTTGTTGCCTCATCAGAGGTGTTGTCCAATCATTTCAGCCATAAGCACAAGGATTCTCGAAGCACATTTTCTTATGGTCACTCCTTCACCGTCTCCTTAAATTCTAATGACGAAGCCATTGTTCTTCAAGAGGAATGTGTCGGCAAACTGTTTATTCTCAATAATAGTATTGTGAGTCTGGGAAATGCGGTCAGTATTAGCTGCATTGGTCCTAACTATTCTGAGCCGCGGTATCAGTATGATATATTGGCCAAGTCTCAAATATGTAGTTTGAAGTTACAGTCTTTTCCAAAGAATGTCCAATGCGTTACTTTAGCAGCTCTTTTATCAAAGTTCCTCGTGATTCCATTTGGTCATTTTGGTTCTTCTGAACTTCTCGAGCTAGAAATTTGCATAACCCCCAAGGTACCTCCTATCTCCTCCTTTTCATTAATTTGGTCGTTTTTTAAATTATACTATTATTTTTTTCTTTTACCTTTTGAATTAATACTCTAGAATTTTCTCTCAGATTAATCTGTTTTCTTAAATGCCAAAGAAGGTTGTTAGTGTTTTGTATTTGTATTTGTTTTGTATCAGTTCCTGAGATATCAGTATCAAATCATTAATTACTTTCACCCTGTTGTACTGCAGTAAAGGTTGCAATGGATTTTTGTTTTCTTTCTCATGGTTTTATTAGTGATTAATTTGTTGGCAATCGTGTCGCAGATGCAAATCTTCATAAAGTCCTTGACTGGAAAGACGATCCCCCTGAAGGTGGAGAGTTCATACACGATAGCAACTTGAAGGCGAAGATTCGAGACAAGGAAAGAATCTCAGTGGACCAGCAACGTCTGATCTTTGCCAGTAAGGAACTGGCTGACTGCCAGACCCTTGCCCATTACAACATCCAAGAGAAGTCTACCCTCAACCTCATCCTCTGCTTAGGCTCCAGACCCTTACCATCAAGATAA

Protein sequence

>MS.gene009577.t1

METGTEEETVDSSEDVNEKNSVSVMISDPNSFDCCICFQPLSIPVFQCVNGHIVCSTCCDKHRNKCPKCSKRIRFKRCKAIENLLQSFKMSCLNEKHGCKETMRYNEKKKHEEECMYVPCYCPLSGCDFVASSEVLSNHFSHKHKDSRSTFSYGHSFTVSLNSNDEAIVLQEECVGKLFILNNSIVSLGNAVSISCIGPNYSEPRYQYDILAKSQICSLKLQSFPKNVQCVTLAALLSKFLVIPFGHFDANLHKVLDWKDDPPEGGEFIHDSNLKAKIRDKERISVDQQRLIFASKELADCQTLAHYNIQEKSTLNLILCLGSRPLPSR