AlfalfaGEDB | MS.gene009560

M. sativa cultivar XinJiangDaYe / MS.gene009560

KEGG: K04506
GO: GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0019538 GO:0019941 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0046872 GO:0046914 GO:0048856 GO:0051603 GO:0071704 GO:0110165 GO:1901564 GO:1901575
PFAM: PF00240.26 PF03145.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009560.t1	RHN56826.1	92	250	20	0	1	250	104	353	1.00E-130	476.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009560.t1	Q05120	56.0	75	33	0	175	249	1	75	1.1e-16	88.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009560.t1	G7KFS7	92.0	250	20	0	1	250	141	390	7.2e-131	476.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene009560	MS.gene009570	PPI
MS.gene37878	MS.gene009560	PPI
MS.gene017314	MS.gene009560	PPI
MS.gene009560	MS.gene009573	PPI
MS.gene009560	MS.gene64288	PPI
MS.gene009560	MS.gene92430	PPI
MS.gene009560	MS.gene037087	PPI
MS.gene044969	MS.gene009560	PPI
MS.gene009560	MS.gene063584	PPI
MS.gene26198	MS.gene009560	PPI
MS.gene009560	MS.gene26189	PPI
MS.gene009560	MS.gene52735	PPI
MS.gene009560	MS.gene92432	PPI
MS.gene009560	MS.gene009566	PPI
MS.gene009560	MS.gene063586	PPI
MS.gene009560	MS.gene017315	PPI
MS.gene009560	MS.gene032535	PPI
MS.gene009560	MS.gene062461	PPI
MS.gene009560	MS.gene063587	PPI
MS.gene009560	MS.gene063610	PPI
MS.gene26190	MS.gene009560	PPI
MS.gene009560	MS.gene94985	PPI
MS.gene009560	MS.gene009591	PPI
MS.gene009560	MS.gene062462	PPI
MS.gene009560	MS.gene92433	PPI
MS.gene009562	MS.gene009560	PPI
MS.gene063581	MS.gene009560	PPI
MS.gene41691	MS.gene009560	PPI
MS.gene009560	MS.gene94984	PPI
MS.gene52735	MS.gene009560	PPI
MS.gene042174	MS.gene009560	PPI
MS.gene72920	MS.gene009560	PPI
MS.gene009560	MS.gene92427	PPI
MS.gene61945	MS.gene009560	PPI
MS.gene009560	MS.gene74055	PPI
MS.gene063598	MS.gene009560	PPI
MS.gene009560	MS.gene009564	PPI
MS.gene009560	MS.gene81557	PPI
MS.gene009560	MS.gene73977	PPI
MS.gene009560	MS.gene010031	PPI
MS.gene009577	MS.gene009560	PPI
MS.gene009560	MS.gene04692	PPI
MS.gene009560	MS.gene39862	PPI
MS.gene53617	MS.gene009560	PPI
MS.gene009560	MS.gene53619	PPI
MS.gene017324	MS.gene009560	PPI
MS.gene009560	MS.gene53616	PPI
MS.gene009560	MS.gene023735	PPI
MS.gene009560	MS.gene044971	PPI
MS.gene009560	MS.gene044173	PPI
MS.gene26197	MS.gene009560	PPI
MS.gene009560	MS.gene26186	PPI
MS.gene26191	MS.gene009560	PPI
MS.gene04692	MS.gene009560	PPI
MS.gene009560	MS.gene21254	PPI
MS.gene009560	MS.gene053691	PPI
MS.gene063603	MS.gene009560	PPI
MS.gene009560	MS.gene41691	PPI
MS.gene009560	MS.gene053692	PPI
MS.gene92435	MS.gene009560	PPI
MS.gene064975	MS.gene009560	PPI
MS.gene009560	MS.gene009576	PPI
MS.gene009560	MS.gene017316	PPI
MS.gene73973	MS.gene009560	PPI
MS.gene009560	MS.gene025072	PPI
MS.gene009543	MS.gene009560	PPI
MS.gene009560	MS.gene70750	PPI
MS.gene009560	MS.gene68940	PPI
MS.gene009560	MS.gene92429	PPI
MS.gene012651	MS.gene009560	PPI
MS.gene73975	MS.gene009560	PPI
MS.gene009560	MS.gene009547	PPI
MS.gene009560	MS.gene063599	PPI
MS.gene009560	MS.gene017308	PPI
MS.gene009560	MS.gene017300	PPI
MS.gene009560	MS.gene74054	PPI
MS.gene009560	MS.gene063583	PPI
MS.gene017315	MS.gene009560	PPI
MS.gene009560	MS.gene81818	PPI
MS.gene009561	MS.gene009560	PPI
MS.gene063589	MS.gene009560	PPI
MS.gene009560	MS.gene063576	PPI
MS.gene009560	MS.gene016802	PPI
MS.gene009560	MS.gene009559	PPI
MS.gene53616	MS.gene009560	PPI
MS.gene009560	MS.gene063596	PPI
MS.gene009560	MS.gene26202	PPI
MS.gene009560	MS.gene017337	PPI
MS.gene009591	MS.gene009560	PPI
MS.gene009560	MS.gene032536	PPI
MS.gene009560	MS.gene025074	PPI
MS.gene009560	MS.gene53618	PPI
MS.gene009560	MS.gene017318	PPI
MS.gene009560	MS.gene063598	PPI
MS.gene81807	MS.gene009560	PPI
MS.gene017309	MS.gene009560	PPI
MS.gene009560	MS.gene25827	PPI
MS.gene009560	MS.gene017321	PPI
MS.gene009560	MS.gene064974	PPI
MS.gene009560	MS.gene062459	PPI
MS.gene64287	MS.gene009560	PPI
MS.gene009560	MS.gene53617	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009560.t1	MTR_5g076720	92.000	250	20	0	1	250	141	390	3.15e-171	478
MS.gene009560.t1	MTR_5g076810	69.600	250	72	2	1	249	23	269	5.06e-124	353
MS.gene009560.t1	MTR_5g067400	68.273	249	76	1	1	249	70	315	6.90e-118	339
MS.gene009560.t1	MTR_1g046640	65.587	247	81	2	4	250	73	315	2.66e-112	325
MS.gene009560.t1	MTR_2g038420	64.683	252	87	1	1	250	84	335	1.16e-111	324
MS.gene009560.t1	MTR_7g024290	66.135	251	81	2	1	250	70	317	3.55e-110	320
MS.gene009560.t1	MTR_2g038430	61.923	260	89	1	1	250	84	343	3.14e-109	318
MS.gene009560.t1	MTR_1g046650	63.600	250	87	2	1	250	1	246	1.03e-108	313
MS.gene009560.t1	MTR_1g046650	63.600	250	87	2	1	250	70	315	1.42e-107	313
MS.gene009560.t1	MTR_5g076520	63.636	253	89	2	1	250	70	322	1.94e-107	313
MS.gene009560.t1	MTR_7g094390	63.200	250	89	1	1	250	231	477	2.04e-107	318
MS.gene009560.t1	MTR_1g046650	63.600	250	87	2	1	250	70	315	4.53e-107	312
MS.gene009560.t1	MTR_5g061290	60.714	252	97	1	1	250	76	327	9.88e-107	311
MS.gene009560.t1	MTR_1g046650	63.600	250	87	2	1	250	101	346	1.60e-106	311
MS.gene009560.t1	MTR_5g076505	60.400	250	99	0	1	250	66	315	5.41e-106	309
MS.gene009560.t1	MTR_5g076660	60.800	250	92	2	1	247	92	338	8.45e-99	292
MS.gene009560.t1	MTR_5g076370	59.600	250	95	2	1	247	93	339	1.14e-96	286
MS.gene009560.t1	MTR_5g076820	64.455	211	72	2	1	209	77	286	1.78e-88	264
MS.gene009560.t1	MTR_5g076540	66.038	159	54	0	1	159	70	228	2.57e-69	213
MS.gene009560.t1	MTR_5g077020	65.896	173	50	4	5	175	45	210	7.60e-69	212
MS.gene009560.t1	MTR_4g058025	68.421	114	35	1	13	125	15	128	8.46e-48	157
MS.gene009560.t1	MTR_4g094468	42.604	169	92	3	3	168	158	324	1.74e-34	126
MS.gene009560.t1	MTR_7g105080	61.333	75	29	0	175	249	1	75	7.75e-23	90.5
MS.gene009560.t1	MTR_3g092130	61.333	75	29	0	175	249	1	75	7.75e-23	90.5
MS.gene009560.t1	MTR_1g059690	61.333	75	29	0	175	249	1	75	7.75e-23	90.5
MS.gene009560.t1	MTR_3g092130	61.333	75	29	0	175	249	1	75	8.82e-23	90.9
MS.gene009560.t1	MTR_5g092700	61.333	75	29	0	175	249	1	75	1.51e-22	90.5
MS.gene009560.t1	MTR_5g092700	45.205	73	40	0	177	249	79	151	6.29e-13	65.1
MS.gene009560.t1	MTR_4g073580	61.333	75	29	0	175	249	1	75	1.51e-22	90.5
MS.gene009560.t1	MTR_4g073580	45.205	73	40	0	177	249	79	151	6.29e-13	65.1
MS.gene009560.t1	MTR_8g088060	61.333	75	29	0	175	249	1	75	2.11e-22	90.5
MS.gene009560.t1	MTR_5g033960	61.333	75	29	0	175	249	1	75	2.47e-22	90.1
MS.gene009560.t1	MTR_4g073580	61.333	75	29	0	175	249	1	75	3.93e-22	90.5
MS.gene009560.t1	MTR_7g116360	61.333	75	29	0	175	249	1	75	9.74e-22	90.5
MS.gene009560.t1	MTR_7g116360	61.333	75	29	0	175	249	77	151	9.74e-22	90.5
MS.gene009560.t1	MTR_7g116360	61.333	75	29	0	175	249	153	227	9.74e-22	90.5
MS.gene009560.t1	MTR_4g088485	61.333	75	29	0	175	249	1	75	9.88e-22	90.1
MS.gene009560.t1	MTR_4g088485	61.333	75	29	0	175	249	138	212	9.88e-22	90.1
MS.gene009560.t1	MTR_4g088485	53.333	75	20	1	175	249	77	136	7.52e-16	74.3
MS.gene009560.t1	MTR_1g066390	61.333	75	29	0	175	249	1	75	1.28e-21	90.1
MS.gene009560.t1	MTR_1g066390	61.333	75	29	0	175	249	77	151	1.28e-21	90.1
MS.gene009560.t1	MTR_1g066390	61.333	75	29	0	175	249	153	227	1.28e-21	90.1
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	1	75	2.53e-21	90.1
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	77	151	2.53e-21	90.1
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	153	227	2.53e-21	90.1
MS.gene009560.t1	MTR_7g116360	61.333	75	29	0	175	249	49	123	2.61e-21	90.5
MS.gene009560.t1	MTR_7g116360	61.333	75	29	0	175	249	125	199	2.61e-21	90.5
MS.gene009560.t1	MTR_7g116360	61.333	75	29	0	175	249	201	275	2.61e-21	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	1	75	3.16e-21	90.1
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	77	151	3.16e-21	90.1
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	153	227	3.16e-21	90.1
MS.gene009560.t1	MTR_6g061930	61.333	75	29	0	175	249	1	75	3.33e-21	90.5
MS.gene009560.t1	MTR_6g061930	61.333	75	29	0	175	249	77	151	3.33e-21	90.5
MS.gene009560.t1	MTR_6g061930	61.333	75	29	0	175	249	214	288	3.33e-21	90.5
MS.gene009560.t1	MTR_6g061930	53.333	75	20	1	175	249	153	212	2.20e-15	74.3
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	1	75	3.59e-21	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	77	151	3.59e-21	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	153	227	3.59e-21	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	229	303	3.59e-21	90.5
MS.gene009560.t1	MTR_4g080920	60.000	75	30	0	175	249	77	151	4.55e-21	89.0
MS.gene009560.t1	MTR_4g080920	60.000	75	30	0	175	249	1	75	8.65e-21	88.2
MS.gene009560.t1	MTR_4g080920	52.000	75	36	0	175	249	153	227	1.38e-16	76.6
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	1	75	6.13e-21	92.0
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	77	151	6.13e-21	92.0
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	153	227	6.13e-21	92.0
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	229	303	6.13e-21	92.0
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	305	379	6.13e-21	92.0
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	381	455	6.13e-21	92.0
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	457	531	6.13e-21	92.0
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	533	607	6.13e-21	92.0
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	609	683	6.13e-21	92.0
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	685	759	6.13e-21	92.0
MS.gene009560.t1	MTR_4g088495	61.333	75	29	0	175	249	761	835	6.13e-21	92.0
MS.gene009560.t1	MTR_4g091580	61.333	75	29	0	175	249	1	75	7.96e-21	90.5
MS.gene009560.t1	MTR_4g091580	61.333	75	29	0	175	249	77	151	7.96e-21	90.5
MS.gene009560.t1	MTR_4g091580	61.333	75	29	0	175	249	153	227	7.96e-21	90.5
MS.gene009560.t1	MTR_4g091580	61.333	75	29	0	175	249	305	379	7.96e-21	90.5
MS.gene009560.t1	MTR_4g091580	60.000	75	30	0	175	249	229	303	2.56e-20	89.0
MS.gene009560.t1	MTR_4g080797	61.333	75	29	0	175	249	1	75	8.20e-21	90.5
MS.gene009560.t1	MTR_4g080797	61.333	75	29	0	175	249	77	151	8.20e-21	90.5
MS.gene009560.t1	MTR_4g080797	61.333	75	29	0	175	249	153	227	8.20e-21	90.5
MS.gene009560.t1	MTR_4g080797	61.333	75	29	0	175	249	229	303	8.20e-21	90.5
MS.gene009560.t1	MTR_4g080797	61.333	75	29	0	175	249	305	379	8.20e-21	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	1	75	8.20e-21	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	77	151	8.20e-21	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	153	227	8.20e-21	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	229	303	8.20e-21	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	305	379	8.20e-21	90.5
MS.gene009560.t1	MTR_8g081020	61.333	75	29	0	175	249	1	75	8.28e-21	90.5
MS.gene009560.t1	MTR_8g081020	61.333	75	29	0	175	249	77	151	8.28e-21	90.5
MS.gene009560.t1	MTR_8g081020	61.333	75	29	0	175	249	153	227	8.28e-21	90.5
MS.gene009560.t1	MTR_8g081020	61.333	75	29	0	175	249	229	303	8.28e-21	90.5
MS.gene009560.t1	MTR_8g081020	61.333	75	29	0	175	249	305	379	8.28e-21	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	1	75	8.36e-21	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	77	151	8.36e-21	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	153	227	8.36e-21	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	229	303	8.36e-21	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	305	379	8.36e-21	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	1	75	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	77	151	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	153	227	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	229	303	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	305	379	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	381	455	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	1	75	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	77	151	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	153	227	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	229	303	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	305	379	1.30e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	381	455	1.30e-20	90.5
MS.gene009560.t1	MTR_5g061310	51.948	77	37	0	174	250	1	77	1.33e-20	83.2
MS.gene009560.t1	MTR_4g091580	60.000	75	30	0	175	249	305	379	1.55e-20	90.5
MS.gene009560.t1	MTR_4g091580	61.333	75	29	0	175	249	1	75	1.60e-20	90.5
MS.gene009560.t1	MTR_4g091580	61.333	75	29	0	175	249	77	151	1.60e-20	90.5
MS.gene009560.t1	MTR_4g091580	61.333	75	29	0	175	249	153	227	1.60e-20	90.5
MS.gene009560.t1	MTR_4g091580	61.333	75	29	0	175	249	229	303	1.60e-20	90.5
MS.gene009560.t1	MTR_4g091580	61.333	75	29	0	175	249	381	455	1.60e-20	90.5
MS.gene009560.t1	MTR_4g091580	61.333	75	29	0	175	249	457	531	1.60e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	1	75	1.65e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	77	151	1.65e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	153	227	1.65e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	229	303	1.65e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	305	379	1.65e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	381	455	1.65e-20	90.5
MS.gene009560.t1	MTR_8g018230	61.333	75	29	0	175	249	457	531	1.65e-20	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	1	75	1.68e-20	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	77	151	1.68e-20	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	153	227	1.68e-20	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	229	303	1.68e-20	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	305	379	1.68e-20	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	381	455	1.68e-20	90.5
MS.gene009560.t1	MTR_4g081010	61.333	75	29	0	175	249	457	531	1.68e-20	90.5
MS.gene009560.t1	MTR_8g479250	56.627	83	36	0	167	249	133	215	2.87e-16	77.0
MS.gene009560.t1	MTR_8g479250	50.000	72	25	1	175	246	217	277	2.57e-13	68.6
MS.gene009560.t1	MTR_5g076350	45.455	77	41	1	175	250	8	84	1.64e-13	64.7
MS.gene009560.t1	MTR_4g009980	44.118	68	38	0	183	250	4	71	5.59e-12	60.1
MS.gene009560.t1	MTR_5g076740	44.737	76	41	1	175	249	86	161	6.16e-12	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene009560.t1	AT3G52590	61.333	75	29	0	175	249	1	75	1.18e-22	90.1
MS.gene009560.t1	AT2G36170	61.333	75	29	0	175	249	1	75	1.18e-22	90.1
MS.gene009560.t1	AT2G35635	61.333	75	29	0	175	249	1	75	1.82e-22	90.5
MS.gene009560.t1	AT2G35635	45.205	73	40	0	177	249	79	151	1.95e-12	63.9
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	1	75	1.85e-22	90.5
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	77	151	1.85e-22	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	1	75	1.85e-22	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	77	151	1.85e-22	90.5
MS.gene009560.t1	AT1G23410	61.333	75	29	0	175	249	1	75	1.94e-22	90.5
MS.gene009560.t1	AT2G47110	61.333	75	29	0	175	249	1	75	2.33e-22	90.5
MS.gene009560.t1	AT2G47110	61.333	75	29	0	175	249	1	75	2.33e-22	90.5
MS.gene009560.t1	AT3G62250	61.333	75	29	0	175	249	1	75	2.40e-22	90.5
MS.gene009560.t1	AT1G31340	61.333	75	29	0	175	249	1	75	2.42e-22	90.1
MS.gene009560.t1	AT1G31340	46.575	73	39	0	177	249	79	151	2.17e-13	66.2
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	1	75	1.02e-21	90.5
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	77	151	1.02e-21	90.5
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	153	227	1.02e-21	90.5
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	1	75	1.02e-21	90.5
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	77	151	1.02e-21	90.5
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	153	227	1.02e-21	90.5
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	1	75	1.02e-21	90.5
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	77	151	1.02e-21	90.5
MS.gene009560.t1	AT4G05050	61.333	75	29	0	175	249	153	227	1.02e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	1	75	1.02e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	77	151	1.02e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	153	227	1.02e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	1	75	1.02e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	77	151	1.02e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	153	227	1.02e-21	90.5
MS.gene009560.t1	AT5G37640	61.333	75	29	0	175	249	79	153	2.16e-21	91.3
MS.gene009560.t1	AT5G37640	57.333	75	32	0	175	249	155	229	2.97e-18	82.8
MS.gene009560.t1	AT5G37640	57.895	76	31	1	175	249	231	306	1.70e-16	77.8
MS.gene009560.t1	AT5G37640	53.333	75	35	0	175	249	3	77	2.68e-15	74.3
MS.gene009560.t1	AT1G65350	61.333	75	29	0	175	249	1	75	3.31e-21	90.9
MS.gene009560.t1	AT1G65350	60.000	75	30	0	175	249	152	226	4.33e-20	87.8
MS.gene009560.t1	AT1G65350	60.000	75	29	1	175	249	77	150	2.01e-18	83.2
MS.gene009560.t1	AT1G65350	51.685	89	29	1	175	249	228	316	1.20e-16	78.2
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	1	75	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	77	151	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	153	227	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	229	303	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	1	75	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	77	151	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	153	227	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	229	303	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	1	75	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	77	151	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	153	227	3.58e-21	90.5
MS.gene009560.t1	AT5G03240	61.333	75	29	0	175	249	229	303	3.58e-21	90.5
MS.gene009560.t1	AT5G20620	61.333	75	29	0	175	249	1	75	3.58e-21	90.5
MS.gene009560.t1	AT5G20620	61.333	75	29	0	175	249	77	151	3.58e-21	90.5
MS.gene009560.t1	AT5G20620	61.333	75	29	0	175	249	153	227	3.58e-21	90.5
MS.gene009560.t1	AT5G20620	61.333	75	29	0	175	249	229	303	3.58e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	1	75	3.68e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	77	151	3.68e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	153	227	3.68e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	229	303	3.68e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	1	75	3.68e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	77	151	3.68e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	153	227	3.68e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	229	303	3.68e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	1	75	3.68e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	77	151	3.68e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	153	227	3.68e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	229	303	3.68e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	1	75	3.68e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	77	151	3.68e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	153	227	3.68e-21	90.5
MS.gene009560.t1	AT4G02890	61.333	75	29	0	175	249	229	303	3.68e-21	90.5
MS.gene009560.t1	AT1G55060	60.000	75	30	0	175	249	77	151	3.76e-21	89.0
MS.gene009560.t1	AT1G55060	58.667	75	31	0	175	249	153	227	2.93e-19	84.0
MS.gene009560.t1	AT1G55060	57.333	75	32	0	175	249	1	75	1.96e-18	81.6
MS.gene009560.t1	AT5G20620	61.333	75	29	0	175	249	1	75	8.40e-21	90.5
MS.gene009560.t1	AT5G20620	61.333	75	29	0	175	249	77	151	8.40e-21	90.5
MS.gene009560.t1	AT5G20620	61.333	75	29	0	175	249	153	227	8.40e-21	90.5
MS.gene009560.t1	AT5G20620	61.333	75	29	0	175	249	229	303	8.40e-21	90.5
MS.gene009560.t1	AT5G20620	61.333	75	29	0	175	249	305	379	8.40e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	1	75	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	77	151	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	153	227	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	229	303	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	305	379	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	1	75	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	77	151	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	153	227	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	229	303	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	305	379	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	1	75	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	77	151	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	153	227	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	229	303	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	305	379	8.59e-21	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	1	75	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	77	151	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	153	227	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	229	303	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	305	379	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	381	455	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	1	75	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	77	151	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	153	227	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	229	303	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	305	379	1.37e-20	90.5
MS.gene009560.t1	AT4G05320	61.333	75	29	0	175	249	381	455	1.37e-20	90.5
MS.gene009560.t1	AT3G09790	60.000	75	30	0	175	249	79	153	6.05e-19	86.3
MS.gene009560.t1	AT3G09790	56.000	75	33	0	175	249	3	77	1.98e-17	81.6
MS.gene009560.t1	AT3G09790	50.685	73	36	0	175	247	552	624	1.32e-12	67.4
MS.gene009560.t1	AT3G09790	49.275	69	35	0	175	243	393	461	7.17e-11	62.4
MS.gene009560.t1	AT3G09790	60.000	75	30	0	175	249	79	153	6.05e-19	86.3
MS.gene009560.t1	AT3G09790	56.000	75	33	0	175	249	3	77	1.98e-17	81.6
MS.gene009560.t1	AT3G09790	50.685	73	36	0	175	247	552	624	1.32e-12	67.4
MS.gene009560.t1	AT3G09790	49.275	69	35	0	175	243	393	461	7.17e-11	62.4
MS.gene009560.t1	AT5G37930	30.814	172	115	2	1	168	169	340	9.18e-18	81.6
MS.gene009560.t1	AT1G53930	48.649	74	38	0	174	247	85	158	2.96e-15	71.6
MS.gene009560.t1	AT1G53950	38.947	95	54	1	159	249	49	143	1.02e-14	69.7
MS.gene009560.t1	AT1G66660	27.895	190	121	7	1	177	38	224	2.35e-13	67.8
MS.gene009560.t1	AT1G66660	28.571	182	114	7	1	169	162	340	2.22e-12	66.2
MS.gene009560.t1	AT5G37870	26.875	160	112	4	1	155	101	260	1.85e-11	63.2
MS.gene009560.t1	AT1G66650	28.249	177	116	6	3	168	144	320	7.57e-11	61.6
MS.gene009560.t1	AT5G37890	28.302	159	110	4	1	155	107	265	9.89e-11	61.2

Find 50 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTGCGAATCCCCGTGTTTA+TGG	0.149533	5.3:-62178378	None:intergenic
CACCTTGTCCTCCGCCTCCT+TGG	0.233407	5.3:+62179138	MS.gene009560:CDS
ACCTTGTCCTCCGCCTCCTT+GGG	0.242433	5.3:+62179139	MS.gene009560:CDS
AAAATCATCTCTTTCACTTT+GGG	0.282007	5.3:-62179006	None:intergenic
AGTAATCCGTTGGACATTCT+TGG	0.282603	5.3:-62178629	None:intergenic
GCTGTCAATATTTGCTGCTT+TGG	0.309542	5.3:+62178526	MS.gene009560:CDS
AATAATAGTACTACGTTGTT+AGG	0.329561	5.3:+62178499	MS.gene009560:CDS
AGGGACAGTAACATGGCTTA+TGG	0.381385	5.3:-62178303	None:intergenic
GAGTTCCTTGTGATTCCATT+TGG	0.382371	5.3:+62178670	MS.gene009560:CDS
CCATGTCCGAATGCAAAATA+TGG	0.389988	5.3:+62178226	MS.gene009560:CDS
TGAGTATAGTTACGATATAT+TGG	0.390497	5.3:+62178567	MS.gene009560:CDS
ATCTTTGTAAAGGGTCTAGA+TGG	0.394549	5.3:+62178943	MS.gene009560:CDS
GGTTTCATCATTAGACTTCA+AGG	0.410456	5.3:-62178434	None:intergenic
CGTTGTAATCGGCAAGGGTC+TGG	0.426875	5.3:-62179095	None:intergenic
CGAATGCAAAATATGGTTGC+AGG	0.426913	5.3:+62178233	MS.gene009560:CDS
AACAAAGTCACATCCTGAAA+AGG	0.427663	5.3:-62178323	None:intergenic
ATCAGACGTTGGTCGTGCAC+TGG	0.439526	5.3:-62179045	None:intergenic
GGAGGCGGAGGACAAGGTGG+AGG	0.482575	5.3:-62179134	None:intergenic
CCCCAAGGAGGCGGAGGACA+AGG	0.483914	5.3:-62179140	None:intergenic
GCAGATGCAAATCTTTGTAA+AGG	0.490691	5.3:+62178933	MS.gene009560:intron
TACTCAGACTCAGAAACGTC+TGG	0.490998	5.3:-62178550	None:intergenic
CAGATGCAAATCTTTGTAAA+GGG	0.507120	5.3:+62178934	MS.gene009560:intron
ACAAAGTCACATCCTGAAAA+GGG	0.516674	5.3:-62178322	None:intergenic
GACCAACGTCTGATCTTAGC+TGG	0.525369	5.3:+62179054	MS.gene009560:CDS
AGAGGTTCAGAGGAACCAAA+TGG	0.528144	5.3:-62178685	None:intergenic
TCAGACGTTGGTCGTGCACT+GGG	0.533519	5.3:-62179044	None:intergenic
TTCTAACTTGAGAGGTTCAG+AGG	0.536773	5.3:-62178695	None:intergenic
ATGCAAATTTCTAACTTGAG+AGG	0.541031	5.3:-62178703	None:intergenic
TCTAGTCCCCAAGGAGGCGG+AGG	0.549338	5.3:-62179146	None:intergenic
TTGACGTTAAGAGTTCATAC+AGG	0.565205	5.3:+62178980	MS.gene009560:CDS
TTTGACGTTGTAATCGGCAA+GGG	0.569834	5.3:-62179100	None:intergenic
CCTTGTCCTCCGCCTCCTTG+GGG	0.573766	5.3:+62179140	MS.gene009560:CDS
TTGTGGTCATCTAGTCCCCA+AGG	0.576652	5.3:-62179155	None:intergenic
GATTTGCTAAAGTAATCCGT+TGG	0.578489	5.3:-62178639	None:intergenic
TCATCTAGTCCCCAAGGAGG+CGG	0.583160	5.3:-62179149	None:intergenic
AAAATAGGTACATTAGGCAG+AGG	0.589897	5.3:+62178260	MS.gene009560:CDS
TGTATGAACTCTTAACGTCA+AGG	0.595749	5.3:-62178978	None:intergenic
CAAGGAGGCGGAGGACAAGG+TGG	0.596069	5.3:-62179137	None:intergenic
CCTGAAAAGGGACAGTAACA+TGG	0.598024	5.3:-62178310	None:intergenic
TGAAACCATTGTTCTTCGAG+AGG	0.606566	5.3:+62178450	MS.gene009560:CDS
GAGGCGGAGGACAAGGTGGA+GGG	0.612344	5.3:-62179133	None:intergenic
AAATAGGTACATTAGGCAGA+GGG	0.612478	5.3:+62178261	MS.gene009560:CDS
GTATGAACTCTTAACGTCAA+GGG	0.613401	5.3:-62178977	None:intergenic
TTAGCTGGTAAGCAACTCGA+TGG	0.631306	5.3:+62179069	MS.gene009560:CDS
GAATGCAAAATATGGTTGCA+GGG	0.639123	5.3:+62178234	MS.gene009560:CDS
AGACTTCAAGGAGATAACGA+AGG	0.683035	5.3:-62178422	None:intergenic
AGGAACCAAATGGAATCACA+AGG	0.704215	5.3:-62178675	None:intergenic
TGGTCATCTAGTCCCCAAGG+AGG	0.725245	5.3:-62179152	None:intergenic
TACCAGCTAAGATCAGACGT+TGG	0.729448	5.3:-62179056	None:intergenic
GGATATAGGAAGTACCATGG+GGG	0.773367	5.3:-62178737	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GAAGATATTAACAATTAAAT+AGG	-	chr5.3:62178783-62178802	None:intergenic	15.0%
!!!	AAATTTTAGACTGATATTTA+AGG	-	chr5.3:62178884-62178903	None:intergenic	15.0%
!!!	ATTTTGTTGTATCGATTTAT+TGG	+	chr5.3:62178900-62178919	MS.gene009560:intron	20.0%
!	AAAAATCATCTCTTTCACTT+TGG	-	chr5.3:62179010-62179029	None:intergenic	25.0%
!	AAAATCATCTCTTTCACTTT+GGG	-	chr5.3:62179009-62179028	None:intergenic	25.0%
!	AATAATAGTACTACGTTGTT+AGG	+	chr5.3:62178499-62178518	MS.gene009560:CDS	25.0%
!	GAAAATAACAAGCAAAGAAA+AGG	-	chr5.3:62178761-62178780	None:intergenic	25.0%
!	TGAGTATAGTTACGATATAT+TGG	+	chr5.3:62178567-62178586	MS.gene009560:CDS	25.0%
!!	TCGCAAATCAAATTTTCTTA+TGG	+	chr5.3:62178394-62178413	MS.gene009560:CDS	25.0%
!!!	AATCACTAACAACACTTTTT+TGG	-	chr5.3:62178836-62178855	None:intergenic	25.0%
!!!	ATCATTTTTGACGTTGTAAT+CGG	-	chr5.3:62179109-62179128	None:intergenic	25.0%
!!!	GAGATGATTTTTGAAAATGA+TGG	+	chr5.3:62179018-62179037	MS.gene009560:CDS	25.0%
	ACAAGCAAAGAAAAGGATAT+AGG	-	chr5.3:62178754-62178773	None:intergenic	30.0%
	ATGCAAATTTCTAACTTGAG+AGG	-	chr5.3:62178706-62178725	None:intergenic	30.0%
	CAGATGCAAATCTTTGTAAA+GGG	+	chr5.3:62178934-62178953	MS.gene009560:intron	30.0%
!	ATGCATTTTTGCCATAAACA+CGG	+	chr5.3:62178367-62178386	MS.gene009560:CDS	30.0%
!!	TATCGATTTATTGGCAATTG+TGG	+	chr5.3:62178909-62178928	MS.gene009560:intron	30.0%
	AAAATAGGTACATTAGGCAG+AGG	+	chr5.3:62178260-62178279	MS.gene009560:CDS	35.0%
	AAATAGGTACATTAGGCAGA+GGG	+	chr5.3:62178261-62178280	MS.gene009560:CDS	35.0%
	AACAAAGTCACATCCTGAAA+AGG	-	chr5.3:62178326-62178345	None:intergenic	35.0%
	ACAAAGTCACATCCTGAAAA+GGG	-	chr5.3:62178325-62178344	None:intergenic	35.0%
	ATCTTTGTAAAGGGTCTAGA+TGG	+	chr5.3:62178943-62178962	MS.gene009560:CDS	35.0%
	GAATGCAAAATATGGTTGCA+GGG	+	chr5.3:62178234-62178253	MS.gene009560:CDS	35.0%
	GCAGATGCAAATCTTTGTAA+AGG	+	chr5.3:62178933-62178952	MS.gene009560:intron	35.0%
	GGGTGAAAAATAGGTACATT+AGG	+	chr5.3:62178254-62178273	MS.gene009560:CDS	35.0%
	GGTTTCATCATTAGACTTCA+AGG	-	chr5.3:62178437-62178456	None:intergenic	35.0%
	GTATGAACTCTTAACGTCAA+GGG	-	chr5.3:62178980-62178999	None:intergenic	35.0%
	TGTATGAACTCTTAACGTCA+AGG	-	chr5.3:62178981-62179000	None:intergenic	35.0%
	TTGACGTTAAGAGTTCATAC+AGG	+	chr5.3:62178980-62178999	MS.gene009560:CDS	35.0%
!	ATTTTCCTCTCGAAGAACAA+TGG	-	chr5.3:62178458-62178477	None:intergenic	35.0%
!	CTGCAACCATATTTTGCATT+CGG	-	chr5.3:62178235-62178254	None:intergenic	35.0%
!	TGCATTTTTGCCATAAACAC+GGG	+	chr5.3:62178368-62178387	MS.gene009560:CDS	35.0%
!!	AAAGGATATAGGAAGTACCA+TGG	-	chr5.3:62178743-62178762	None:intergenic	35.0%
!!	AAGGATATAGGAAGTACCAT+GGG	-	chr5.3:62178742-62178761	None:intergenic	35.0%
!!	GATTTGCTAAAGTAATCCGT+TGG	-	chr5.3:62178642-62178661	None:intergenic	35.0%
	AGACTTCAAGGAGATAACGA+AGG	-	chr5.3:62178425-62178444	None:intergenic	40.0%
	AGGAACCAAATGGAATCACA+AGG	-	chr5.3:62178678-62178697	None:intergenic	40.0%
	AGTAATCCGTTGGACATTCT+TGG	-	chr5.3:62178632-62178651	None:intergenic	40.0%
	ATGGTTGCAGGGTGAAAAAT+AGG	+	chr5.3:62178245-62178264	MS.gene009560:CDS	40.0%
	CCATGTCCGAATGCAAAATA+TGG	+	chr5.3:62178226-62178245	MS.gene009560:CDS	40.0%
	CGAATGCAAAATATGGTTGC+AGG	+	chr5.3:62178233-62178252	MS.gene009560:CDS	40.0%
	GAGTTCCTTGTGATTCCATT+TGG	+	chr5.3:62178670-62178689	MS.gene009560:CDS	40.0%
	TGAAACCATTGTTCTTCGAG+AGG	+	chr5.3:62178450-62178469	MS.gene009560:CDS	40.0%
	TTCTAACTTGAGAGGTTCAG+AGG	-	chr5.3:62178698-62178717	None:intergenic	40.0%
	TTTGACGTTGTAATCGGCAA+GGG	-	chr5.3:62179103-62179122	None:intergenic	40.0%
!	CCATATTTTGCATTCGGACA+TGG	-	chr5.3:62178229-62178248	None:intergenic	40.0%
!	CTTTTGCCAAGAATGTCCAA+CGG	+	chr5.3:62178623-62178642	MS.gene009560:CDS	40.0%
!	GCATTTTTGCCATAAACACG+GGG	+	chr5.3:62178369-62178388	MS.gene009560:CDS	40.0%
!	GCTGTCAATATTTGCTGCTT+TGG	+	chr5.3:62178526-62178545	MS.gene009560:CDS	40.0%
!	TTTTGACGTTGTAATCGGCA+AGG	-	chr5.3:62179104-62179123	None:intergenic	40.0%
!!	AGGATATAGGAAGTACCATG+GGG	-	chr5.3:62178741-62178760	None:intergenic	40.0%
	AGAGGTTCAGAGGAACCAAA+TGG	-	chr5.3:62178688-62178707	None:intergenic	45.0%
	AGGGACAGTAACATGGCTTA+TGG	-	chr5.3:62178306-62178325	None:intergenic	45.0%
	CCTGAAAAGGGACAGTAACA+TGG	-	chr5.3:62178313-62178332	None:intergenic	45.0%
	TACCAGCTAAGATCAGACGT+TGG	-	chr5.3:62179059-62179078	None:intergenic	45.0%
	TACTCAGACTCAGAAACGTC+TGG	-	chr5.3:62178553-62178572	None:intergenic	45.0%
	TTAGCTGGTAAGCAACTCGA+TGG	+	chr5.3:62179069-62179088	MS.gene009560:CDS	45.0%
	TTTGCGAATCCCCGTGTTTA+TGG	-	chr5.3:62178381-62178400	None:intergenic	45.0%
!	CCATGTTACTGTCCCTTTTC+AGG	+	chr5.3:62178310-62178329	MS.gene009560:CDS	45.0%
!!	GGATATAGGAAGTACCATGG+GGG	-	chr5.3:62178740-62178759	None:intergenic	45.0%
	GACCAACGTCTGATCTTAGC+TGG	+	chr5.3:62179054-62179073	MS.gene009560:CDS	50.0%
	ATCAGACGTTGGTCGTGCAC+TGG	-	chr5.3:62179048-62179067	None:intergenic	55.0%
	CGTTGTAATCGGCAAGGGTC+TGG	-	chr5.3:62179098-62179117	None:intergenic	55.0%
	TCAGACGTTGGTCGTGCACT+GGG	-	chr5.3:62179047-62179066	None:intergenic	55.0%
!	CATAACTTGCGCAACCCCCA+TGG	+	chr5.3:62178723-62178742	MS.gene009560:CDS	55.0%
	ACCTTGTCCTCCGCCTCCTT+GGG	+	chr5.3:62179139-62179158	MS.gene009560:CDS	60.0%
	CAAGGAGGCGGAGGACAAGG+TGG	-	chr5.3:62179140-62179159	None:intergenic	65.0%
	CACCTTGTCCTCCGCCTCCT+TGG	+	chr5.3:62179138-62179157	MS.gene009560:CDS	65.0%
	CCTTGTCCTCCGCCTCCTTG+GGG	+	chr5.3:62179140-62179159	MS.gene009560:CDS	65.0%
	GAGGCGGAGGACAAGGTGGA+GGG	-	chr5.3:62179136-62179155	None:intergenic	65.0%
	CCCCAAGGAGGCGGAGGACA+AGG	-	chr5.3:62179143-62179162	None:intergenic	70.0%
	GGAGGCGGAGGACAAGGTGG+AGG	-	chr5.3:62179137-62179156	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	62178223	62179167	62178223	ID=MS.gene009560
chr5.3	mRNA	62178223	62179167	62178223	ID=MS.gene009560.t1;Parent=MS.gene009560
chr5.3	exon	62178223	62178744	62178223	ID=MS.gene009560.t1.exon1;Parent=MS.gene009560.t1
chr5.3	CDS	62178223	62178744	62178223	ID=cds.MS.gene009560.t1;Parent=MS.gene009560.t1
chr5.3	exon	62178937	62179167	62178937	ID=MS.gene009560.t1.exon2;Parent=MS.gene009560.t1
chr5.3	CDS	62178937	62179167	62178937	ID=cds.MS.gene009560.t1;Parent=MS.gene009560.t1

Gene Sequence

>MS.gene009560

ATGCCATGTCCGAATGCAAAATATGGTTGCAGGGTGAAAAATAGGTACATTAGGCAGAGGGATCATGAAGACGAATGCATCCATAAGCCATGTTACTGTCCCTTTTCAGGATGTGACTTTGTTGAATCATCAAAAGTGTTGTCTATGCATTTTTGCCATAAACACGGGGATTCGCAAATCAAATTTTCTTATGGTCAATCCTTCGTTATCTCCTTGAAGTCTAATGATGAAACCATTGTTCTTCGAGAGGAAAATGATGACAAACTATTTATTCTCAATAATAGTACTACGTTGTTAGGAAATGCTGTCAATATTTGCTGCTTTGGTCCAGACGTTTCTGAGTCTGAGTATAGTTACGATATATTGGCTACGTCTCAGATATGTAAACTGAAATTACACTCTTTTGCCAAGAATGTCCAACGGATTACTTTAGCAAATCTTTCATCAGAGTTCCTTGTGATTCCATTTGGTTCCTCTGAACCTCTCAAGTTAGAAATTTGCATAACTTGCGCAACCCCCATGGTACTTCCTATATCCTTTTCTTTGCTTGTTATTTTCCTATTTAATTGTTAATATCTTCTTTCTATGTATTGAATCACTATTTCAAATGCCAAAAAAGTGTTGTTAGTGATTTCTATTTTTCTATTGTTGATCAGTTCCTTAAATATCAGTCTAAAATTTTGTTGTATCGATTTATTGGCAATTGTGGTGCAGATGCAAATCTTTGTAAAGGGTCTAGATGGAAAGACAATGACCCTTGACGTTAAGAGTTCATACAGGATGCCCAAAGTGAAAGAGATGATTTTTGAAAATGATGGTATCCCAGTGCACGACCAACGTCTGATCTTAGCTGGTAAGCAACTCGATGGCAACCAGACCCTTGCCGATTACAACGTCAAAAATGATTCAACCCTCCACCTTGTCCTCCGCCTCCTTGGGGACTAG

Protein sequence

>MS.gene009560.t1

MPCPNAKYGCRVKNRYIRQRDHEDECIHKPCYCPFSGCDFVESSKVLSMHFCHKHGDSQIKFSYGQSFVISLKSNDETIVLREENDDKLFILNNSTTLLGNAVNICCFGPDVSESEYSYDILATSQICKLKLHSFAKNVQRITLANLSSEFLVIPFGSSEPLKLEICITCATPMMQIFVKGLDGKTMTLDVKSSYRMPKVKEMIFENDGIPVHDQRLILAGKQLDGNQTLADYNVKNDSTLHLVLRLLGD