AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92430.t1 MTR_5g076720 91.908 346 28 0 8 353 45 390 0.0 656
MS.gene92430.t1 MTR_5g067400 69.304 316 94 1 37 352 3 315 3.50e-158 446
MS.gene92430.t1 MTR_7g024290 69.497 318 93 2 37 353 3 317 1.63e-154 437
MS.gene92430.t1 MTR_1g046640 65.615 317 105 2 37 353 3 315 4.34e-150 426
MS.gene92430.t1 MTR_7g094390 63.473 334 119 1 20 353 147 477 2.46e-148 427
MS.gene92430.t1 MTR_2g038420 64.072 334 118 1 22 353 2 335 2.69e-148 422
MS.gene92430.t1 MTR_2g038430 61.404 342 122 1 22 353 2 343 5.70e-148 421
MS.gene92430.t1 MTR_1g046650 64.087 323 112 2 31 353 28 346 2.03e-145 415
MS.gene92430.t1 MTR_1g046650 64.873 316 107 2 38 353 4 315 3.35e-145 413
MS.gene92430.t1 MTR_5g076520 65.000 320 109 2 37 353 3 322 1.39e-144 412
MS.gene92430.t1 MTR_5g061290 60.615 325 123 3 32 353 5 327 3.16e-137 393
MS.gene92430.t1 MTR_5g076660 60.119 336 128 2 18 350 6 338 1.05e-136 392
MS.gene92430.t1 MTR_5g076370 59.824 341 130 3 14 350 2 339 3.47e-136 391
MS.gene92430.t1 MTR_5g076810 69.373 271 79 2 83 352 2 269 3.02e-133 381
MS.gene92430.t1 MTR_1g046650 64.966 294 99 2 60 353 26 315 1.04e-132 381
MS.gene92430.t1 MTR_5g076505 62.799 293 109 0 61 353 23 315 2.60e-131 378
MS.gene92430.t1 MTR_5g076820 65.827 278 90 4 37 312 12 286 9.08e-121 350
MS.gene92430.t1 MTR_5g076540 69.333 225 69 0 38 262 4 228 7.82e-107 313
MS.gene92430.t1 MTR_1g046650 62.400 250 90 2 104 353 1 246 2.38e-105 309
MS.gene92430.t1 MTR_5g077020 56.542 214 77 5 86 290 16 222 2.06e-69 217
MS.gene92430.t1 MTR_4g094468 46.025 239 124 3 36 271 88 324 7.74e-65 209
MS.gene92430.t1 MTR_4g058025 68.421 114 35 1 116 228 15 128 2.88e-47 159
MS.gene92430.t1 MTR_5g076680 85.185 54 8 0 8 61 9 62 3.48e-24 97.8
MS.gene92430.t1 MTR_7g105080 60.000 75 30 0 278 352 1 75 3.33e-22 90.9
MS.gene92430.t1 MTR_3g092130 60.000 75 30 0 278 352 1 75 3.33e-22 90.9
MS.gene92430.t1 MTR_1g059690 60.000 75 30 0 278 352 1 75 3.33e-22 90.9
MS.gene92430.t1 MTR_3g092130 60.000 75 30 0 278 352 1 75 4.94e-22 90.9
MS.gene92430.t1 MTR_5g092700 60.000 75 30 0 278 352 1 75 8.78e-22 90.9
MS.gene92430.t1 MTR_5g092700 43.662 71 40 0 282 352 81 151 2.57e-12 64.3
MS.gene92430.t1 MTR_4g073580 60.000 75 30 0 278 352 1 75 8.78e-22 90.9
MS.gene92430.t1 MTR_4g073580 43.662 71 40 0 282 352 81 151 2.57e-12 64.3
MS.gene92430.t1 MTR_8g088060 60.000 75 30 0 278 352 1 75 1.74e-21 90.1
MS.gene92430.t1 MTR_5g033960 60.000 75 30 0 278 352 1 75 1.93e-21 89.7
MS.gene92430.t1 MTR_4g073580 60.000 75 30 0 278 352 1 75 2.48e-21 90.5
MS.gene92430.t1 MTR_7g085590 26.582 237 159 4 40 272 58 283 2.82e-21 92.8
MS.gene92430.t1 MTR_7g116360 60.000 75 30 0 278 352 1 75 6.32e-21 90.5
MS.gene92430.t1 MTR_7g116360 60.000 75 30 0 278 352 77 151 6.32e-21 90.5
MS.gene92430.t1 MTR_7g116360 60.000 75 30 0 278 352 153 227 6.32e-21 90.5
MS.gene92430.t1 MTR_4g088485 60.000 75 30 0 278 352 1 75 7.37e-21 89.7
MS.gene92430.t1 MTR_4g088485 60.000 75 30 0 278 352 138 212 7.37e-21 89.7
MS.gene92430.t1 MTR_4g088485 52.000 75 21 1 278 352 77 136 2.93e-15 74.3
MS.gene92430.t1 MTR_1g066390 60.000 75 30 0 278 352 1 75 8.71e-21 90.1
MS.gene92430.t1 MTR_1g066390 60.000 75 30 0 278 352 77 151 8.71e-21 90.1
MS.gene92430.t1 MTR_1g066390 60.000 75 30 0 278 352 153 227 8.71e-21 90.1
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 1 75 1.80e-20 90.1
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 77 151 1.80e-20 90.1
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 153 227 1.80e-20 90.1
MS.gene92430.t1 MTR_7g116360 60.000 75 30 0 278 352 49 123 1.98e-20 90.1
MS.gene92430.t1 MTR_7g116360 60.000 75 30 0 278 352 125 199 1.98e-20 90.1
MS.gene92430.t1 MTR_7g116360 60.000 75 30 0 278 352 201 275 1.98e-20 90.1
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 1 75 2.24e-20 90.1
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 77 151 2.24e-20 90.1
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 153 227 2.24e-20 90.1
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 1 75 2.51e-20 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 77 151 2.51e-20 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 153 227 2.51e-20 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 229 303 2.51e-20 90.5
MS.gene92430.t1 MTR_6g061930 60.000 75 30 0 278 352 1 75 2.82e-20 90.1
MS.gene92430.t1 MTR_6g061930 60.000 75 30 0 278 352 77 151 2.82e-20 90.1
MS.gene92430.t1 MTR_6g061930 60.000 75 30 0 278 352 214 288 2.82e-20 90.1
MS.gene92430.t1 MTR_6g061930 52.000 75 21 1 278 352 153 212 8.81e-15 74.3
MS.gene92430.t1 MTR_4g080920 58.667 75 31 0 278 352 77 151 3.31e-20 88.6
MS.gene92430.t1 MTR_4g080920 58.667 75 31 0 278 352 1 75 6.87e-20 87.8
MS.gene92430.t1 MTR_4g080920 49.333 75 38 0 278 352 153 227 1.20e-14 72.8
MS.gene92430.t1 MTR_8g081020 60.000 75 30 0 278 352 1 75 5.33e-20 90.5
MS.gene92430.t1 MTR_8g081020 60.000 75 30 0 278 352 77 151 5.33e-20 90.5
MS.gene92430.t1 MTR_8g081020 60.000 75 30 0 278 352 153 227 5.33e-20 90.5
MS.gene92430.t1 MTR_8g081020 60.000 75 30 0 278 352 229 303 5.33e-20 90.5
MS.gene92430.t1 MTR_8g081020 60.000 75 30 0 278 352 305 379 5.33e-20 90.5
MS.gene92430.t1 MTR_4g080797 60.000 75 30 0 278 352 1 75 5.70e-20 90.5
MS.gene92430.t1 MTR_4g080797 60.000 75 30 0 278 352 77 151 5.70e-20 90.5
MS.gene92430.t1 MTR_4g080797 60.000 75 30 0 278 352 153 227 5.70e-20 90.5
MS.gene92430.t1 MTR_4g080797 60.000 75 30 0 278 352 229 303 5.70e-20 90.5
MS.gene92430.t1 MTR_4g080797 60.000 75 30 0 278 352 305 379 5.70e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 1 75 5.70e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 77 151 5.70e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 153 227 5.70e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 229 303 5.70e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 305 379 5.70e-20 90.5
MS.gene92430.t1 MTR_4g091580 60.000 75 30 0 278 352 1 75 5.76e-20 90.5
MS.gene92430.t1 MTR_4g091580 60.000 75 30 0 278 352 77 151 5.76e-20 90.5
MS.gene92430.t1 MTR_4g091580 60.000 75 30 0 278 352 153 227 5.76e-20 90.5
MS.gene92430.t1 MTR_4g091580 60.000 75 30 0 278 352 305 379 5.76e-20 90.5
MS.gene92430.t1 MTR_4g091580 58.667 75 31 0 278 352 229 303 1.91e-19 89.0
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 1 75 5.82e-20 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 77 151 5.82e-20 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 153 227 5.82e-20 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 229 303 5.82e-20 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 305 379 5.82e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 1 75 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 77 151 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 153 227 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 229 303 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 305 379 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 381 455 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 1 75 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 77 151 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 153 227 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 229 303 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 305 379 9.11e-20 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 381 455 9.11e-20 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 1 75 1.15e-19 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 77 151 1.15e-19 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 153 227 1.15e-19 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 229 303 1.15e-19 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 305 379 1.15e-19 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 381 455 1.15e-19 90.5
MS.gene92430.t1 MTR_4g081010 60.000 75 30 0 278 352 457 531 1.15e-19 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 1 75 1.16e-19 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 77 151 1.16e-19 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 153 227 1.16e-19 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 229 303 1.16e-19 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 305 379 1.16e-19 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 381 455 1.16e-19 90.5
MS.gene92430.t1 MTR_8g018230 60.000 75 30 0 278 352 457 531 1.16e-19 90.5
MS.gene92430.t1 MTR_4g091580 60.000 75 30 0 278 352 1 75 1.28e-19 90.5
MS.gene92430.t1 MTR_4g091580 60.000 75 30 0 278 352 77 151 1.28e-19 90.5
MS.gene92430.t1 MTR_4g091580 60.000 75 30 0 278 352 153 227 1.28e-19 90.5
MS.gene92430.t1 MTR_4g091580 60.000 75 30 0 278 352 229 303 1.28e-19 90.5
MS.gene92430.t1 MTR_4g091580 58.667 75 31 0 278 352 305 379 1.28e-19 90.5
MS.gene92430.t1 MTR_4g091580 60.000 75 30 0 278 352 381 455 1.28e-19 90.5
MS.gene92430.t1 MTR_4g091580 60.000 75 30 0 278 352 457 531 1.28e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 77 151 1.58e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 153 227 1.58e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 229 303 1.58e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 305 379 1.58e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 381 455 1.58e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 457 531 1.58e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 533 607 1.58e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 609 683 1.58e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 685 759 1.58e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 761 835 1.58e-19 90.5
MS.gene92430.t1 MTR_4g088495 60.000 75 30 0 278 352 1 75 1.90e-19 90.1
MS.gene92430.t1 MTR_5g061310 50.649 77 38 0 277 353 1 77 1.88e-19 82.0
MS.gene92430.t1 MTR_8g038370 26.613 248 158 6 13 243 80 320 1.06e-18 86.7
MS.gene92430.t1 MTR_3g017590 33.898 118 76 1 44 159 52 169 3.45e-17 81.3
MS.gene92430.t1 MTR_3g091510 32.353 136 90 1 26 159 41 176 2.00e-16 79.3
MS.gene92430.t1 MTR_8g027520 31.915 141 94 1 21 159 29 169 8.51e-16 77.4
MS.gene92430.t1 MTR_8g027520 31.915 141 94 1 21 159 20 160 1.02e-15 77.4
MS.gene92430.t1 MTR_8g479250 55.422 83 37 0 270 352 133 215 1.80e-15 76.3
MS.gene92430.t1 MTR_8g479250 48.611 72 26 1 278 349 217 277 1.09e-12 68.2
MS.gene92430.t1 MTR_1g008120 31.544 149 97 2 25 171 48 193 3.95e-15 75.9
MS.gene92430.t1 MTR_7g117415 32.558 129 86 1 15 142 30 158 5.39e-15 75.1
MS.gene92430.t1 MTR_1g054335 27.273 209 142 5 45 243 58 266 1.15e-14 74.3
MS.gene92430.t1 MTR_7g093600 26.000 250 165 7 12 243 20 267 6.61e-14 72.0
MS.gene92430.t1 MTR_5g076350 45.455 77 41 1 278 353 8 84 1.85e-13 65.9
MS.gene92430.t1 MTR_4g009980 45.588 68 37 0 286 353 4 71 7.70e-13 63.5
MS.gene92430.t1 MTR_5g076740 43.421 76 42 1 278 352 86 161 4.97e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92430.t1 AT5G37930 35.043 234 148 2 42 271 107 340 1.03e-43 154
MS.gene92430.t1 AT5G37870 33.333 252 159 6 12 258 13 260 4.76e-40 143
MS.gene92430.t1 AT5G37890 34.247 219 140 4 44 258 47 265 7.38e-36 132
MS.gene92430.t1 AT1G66650 32.157 255 160 6 28 271 68 320 2.91e-33 126
MS.gene92430.t1 AT5G37910 30.802 237 158 3 28 258 18 254 3.56e-33 124
MS.gene92430.t1 AT1G66620 29.304 273 180 4 11 271 3 274 5.38e-33 125
MS.gene92430.t1 AT1G66660 30.268 261 170 6 23 272 81 340 1.20e-31 122
MS.gene92430.t1 AT1G66630 30.894 246 158 5 26 259 22 267 1.48e-28 113
MS.gene92430.t1 AT5G62800 35.106 188 112 5 45 224 40 225 8.05e-27 109
MS.gene92430.t1 AT5G62800 35.106 188 112 5 45 224 40 225 9.50e-27 108
MS.gene92430.t1 AT3G52590 60.000 75 30 0 278 352 1 75 5.71e-22 90.5
MS.gene92430.t1 AT2G36170 60.000 75 30 0 278 352 1 75 5.71e-22 90.5
MS.gene92430.t1 AT2G35635 60.000 75 30 0 278 352 1 75 1.19e-21 90.5
MS.gene92430.t1 AT2G35635 43.662 71 40 0 282 352 81 151 7.80e-12 63.2
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 1 75 1.28e-21 90.5
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 77 151 1.28e-21 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 1 75 1.28e-21 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 77 151 1.28e-21 90.5
MS.gene92430.t1 AT1G23410 60.000 75 30 0 278 352 1 75 1.57e-21 90.1
MS.gene92430.t1 AT1G31340 60.000 75 30 0 278 352 1 75 1.65e-21 90.1
MS.gene92430.t1 AT1G31340 45.070 71 39 0 282 352 81 151 1.03e-12 65.9
MS.gene92430.t1 AT2G47110 60.000 75 30 0 278 352 1 75 1.96e-21 90.1
MS.gene92430.t1 AT2G47110 60.000 75 30 0 278 352 1 75 1.96e-21 90.1
MS.gene92430.t1 AT3G62250 60.000 75 30 0 278 352 1 75 2.15e-21 89.7
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 1 75 6.62e-21 90.5
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 77 151 6.62e-21 90.5
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 153 227 6.62e-21 90.5
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 1 75 6.62e-21 90.5
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 77 151 6.62e-21 90.5
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 153 227 6.62e-21 90.5
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 1 75 6.62e-21 90.5
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 77 151 6.62e-21 90.5
MS.gene92430.t1 AT4G05050 60.000 75 30 0 278 352 153 227 6.62e-21 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 1 75 6.62e-21 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 77 151 6.62e-21 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 153 227 6.62e-21 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 1 75 6.62e-21 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 77 151 6.62e-21 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 153 227 6.62e-21 90.5
MS.gene92430.t1 AT5G37640 60.000 75 30 0 278 352 79 153 1.65e-20 91.3
MS.gene92430.t1 AT5G37640 56.000 75 33 0 278 352 155 229 3.57e-17 81.6
MS.gene92430.t1 AT5G37640 57.895 76 31 1 278 352 231 306 3.61e-16 79.0
MS.gene92430.t1 AT5G37640 52.000 75 36 0 278 352 3 77 1.70e-14 73.9
MS.gene92430.t1 AT1G65350 60.000 75 30 0 278 352 1 75 2.46e-20 90.5
MS.gene92430.t1 AT1G65350 58.667 75 31 0 278 352 152 226 3.38e-19 87.4
MS.gene92430.t1 AT1G65350 58.667 75 30 1 278 352 77 150 1.35e-17 82.8
MS.gene92430.t1 AT1G65350 50.562 89 30 1 278 352 228 316 6.83e-16 77.8
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 1 75 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 77 151 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 153 227 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 229 303 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 1 75 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 77 151 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 153 227 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 229 303 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 1 75 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 77 151 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 153 227 2.49e-20 90.5
MS.gene92430.t1 AT5G03240 60.000 75 30 0 278 352 229 303 2.49e-20 90.5
MS.gene92430.t1 AT5G20620 60.000 75 30 0 278 352 1 75 2.49e-20 90.5
MS.gene92430.t1 AT5G20620 60.000 75 30 0 278 352 77 151 2.49e-20 90.5
MS.gene92430.t1 AT5G20620 60.000 75 30 0 278 352 153 227 2.49e-20 90.5
MS.gene92430.t1 AT5G20620 60.000 75 30 0 278 352 229 303 2.49e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 1 75 2.60e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 77 151 2.60e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 153 227 2.60e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 229 303 2.60e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 1 75 2.60e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 77 151 2.60e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 153 227 2.60e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 229 303 2.60e-20 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 1 75 2.60e-20 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 77 151 2.60e-20 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 153 227 2.60e-20 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 229 303 2.60e-20 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 1 75 2.60e-20 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 77 151 2.60e-20 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 153 227 2.60e-20 90.5
MS.gene92430.t1 AT4G02890 60.000 75 30 0 278 352 229 303 2.60e-20 90.5
MS.gene92430.t1 AT1G55060 58.667 75 31 0 278 352 77 151 2.92e-20 88.6
MS.gene92430.t1 AT1G55060 57.333 75 32 0 278 352 153 227 2.11e-18 83.6
MS.gene92430.t1 AT1G55060 56.000 75 33 0 278 352 1 75 1.24e-17 81.3
MS.gene92430.t1 AT5G20620 60.000 75 30 0 278 352 1 75 5.64e-20 90.5
MS.gene92430.t1 AT5G20620 60.000 75 30 0 278 352 77 151 5.64e-20 90.5
MS.gene92430.t1 AT5G20620 60.000 75 30 0 278 352 153 227 5.64e-20 90.5
MS.gene92430.t1 AT5G20620 60.000 75 30 0 278 352 229 303 5.64e-20 90.5
MS.gene92430.t1 AT5G20620 60.000 75 30 0 278 352 305 379 5.64e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 1 75 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 77 151 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 153 227 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 229 303 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 305 379 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 1 75 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 77 151 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 153 227 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 229 303 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 305 379 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 1 75 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 77 151 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 153 227 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 229 303 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 305 379 5.97e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 1 75 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 77 151 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 153 227 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 229 303 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 305 379 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 381 455 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 1 75 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 77 151 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 153 227 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 229 303 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 305 379 9.54e-20 90.5
MS.gene92430.t1 AT4G05320 60.000 75 30 0 278 352 381 455 9.54e-20 90.5
MS.gene92430.t1 AT3G09790 58.667 75 31 0 278 352 79 153 7.72e-18 85.1
MS.gene92430.t1 AT3G09790 54.667 75 34 0 278 352 3 77 1.94e-16 80.9
MS.gene92430.t1 AT3G09790 50.685 73 36 0 278 350 552 624 1.85e-12 68.9
MS.gene92430.t1 AT3G09790 49.275 69 35 0 278 346 393 461 8.35e-11 63.9
MS.gene92430.t1 AT3G09790 58.667 75 31 0 278 352 79 153 7.72e-18 85.1
MS.gene92430.t1 AT3G09790 54.667 75 34 0 278 352 3 77 1.94e-16 80.9
MS.gene92430.t1 AT3G09790 50.685 73 36 0 278 350 552 624 1.85e-12 68.9
MS.gene92430.t1 AT3G09790 49.275 69 35 0 278 346 393 461 8.35e-11 63.9
MS.gene92430.t1 AT3G61790 36.190 105 67 0 36 140 51 155 1.68e-15 77.0
MS.gene92430.t1 AT1G66660 27.778 198 131 6 86 272 20 216 9.65e-15 73.2
MS.gene92430.t1 AT4G27880 32.331 133 88 1 29 159 45 177 1.16e-14 74.3
MS.gene92430.t1 AT1G66610 43.529 85 47 1 28 111 140 224 1.27e-14 73.2
MS.gene92430.t1 AT1G66610 47.619 63 33 0 45 107 53 115 1.03e-11 64.7
MS.gene92430.t1 AT1G66610 24.113 282 146 8 45 258 53 334 1.49e-14 74.3
MS.gene92430.t1 AT1G53930 47.297 74 39 0 277 350 85 158 1.70e-14 70.9
MS.gene92430.t1 AT1G53950 39.560 91 51 1 262 348 49 139 1.84e-14 70.5
MS.gene92430.t1 AT3G58040 33.051 118 77 1 44 159 56 173 3.43e-14 71.2
MS.gene92430.t1 AT3G58040 33.051 118 77 1 44 159 56 173 5.08e-14 72.4
MS.gene92430.t1 AT3G58040 33.051 118 77 1 44 159 56 173 5.08e-14 72.4
MS.gene92430.t1 AT2G41980 34.343 99 65 0 44 142 53 151 5.63e-13 69.3

Find 62 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGCACTCAAGCAATTT+AGG 0.122030 8.4:-59909662 None:intergenic
TTTGCGAATCCCTGTGTTTA+TGG 0.180153 8.4:-59911085 None:intergenic
CACCTTGTCCTCCGCCTCCT+TGG 0.233407 8.4:+59911867 MS.gene92430:CDS
ACCTTGTCCTCCGCCTCCTT+GGG 0.242433 8.4:+59911868 MS.gene92430:CDS
AAAATCATCTCTTTCACTTT+AGG 0.256880 8.4:-59911735 None:intergenic
AGTAATCCGTTGGACATTCT+TGG 0.282603 8.4:-59911336 None:intergenic
TGCAGCACTCAAGCAATTTA+GGG 0.301498 8.4:-59909661 None:intergenic
GCTGTCAATATTTGCTGCTT+TGG 0.309542 8.4:+59911233 MS.gene92430:CDS
AATAATAGTACTACGTTGTT+AGG 0.329561 8.4:+59911206 MS.gene92430:CDS
TGACACTTGTTCCGAAGATT+AGG 0.373049 8.4:-59910840 None:intergenic
GAGTTCCTTGTGATTCCATT+TGG 0.382371 8.4:+59911377 MS.gene92430:CDS
CCATGTCCGAATGCAAAATA+TGG 0.389988 8.4:+59910933 MS.gene92430:CDS
GACCAACGTCTGATCTTTGC+TGG 0.403477 8.4:+59911783 MS.gene92430:CDS
GGTTTCATCATTAGACTTCA+AGG 0.410456 8.4:-59911141 None:intergenic
CGTTGTAATCGGCAAGGGTC+TGG 0.426875 8.4:-59911824 None:intergenic
CGAATGCAAAATATGGTTGC+AGG 0.426913 8.4:+59910940 MS.gene92430:CDS
AACAAAGTCGCATCCTGAAA+AGG 0.427330 8.4:-59911030 None:intergenic
ATCAGACGTTGGTCGTGCAC+TGG 0.434788 8.4:-59911774 None:intergenic
ATGTTTGTAAAGGGTCTAGA+TGG 0.438817 8.4:+59911672 MS.gene92430:CDS
CTACTTGCTGTCCTAATCTT+CGG 0.442229 8.4:+59910829 MS.gene92430:CDS
TTAGGGTTGGAAATTATAAG+AGG 0.446568 8.4:-59909644 None:intergenic
GGAGGCGGAGGACAAGGTGG+AGG 0.482575 8.4:-59911863 None:intergenic
CCCCAAGGAGGCGGAGGACA+AGG 0.483914 8.4:-59911869 None:intergenic
CATTAGACTTCAAGGAGATA+AGG 0.489339 8.4:-59911133 None:intergenic
TACTCAGACTCAGAAGCGTC+TGG 0.490998 8.4:-59911257 None:intergenic
TGAGTATAGTTACGATATGT+TGG 0.492716 8.4:+59911274 MS.gene92430:CDS
GCTGTAATACAGTGTGATAA+TGG 0.496594 8.4:+59910792 MS.gene92430:intron
GCAGATGCAAATGTTTGTAA+AGG 0.498706 8.4:+59911662 MS.gene92430:intron
CAGATGCAAATGTTTGTAAA+GGG 0.509603 8.4:+59911663 MS.gene92430:intron
ACAAAGTCGCATCCTGAAAA+GGG 0.512722 8.4:-59911029 None:intergenic
TTCACAACGTTTAGAGCTGA+TGG 0.525652 8.4:-59910877 None:intergenic
AGAGGTTCAGAGGAACCAAA+TGG 0.528144 8.4:-59911392 None:intergenic
TCAGACGTTGGTCGTGCACT+GGG 0.533519 8.4:-59911773 None:intergenic
TTCTAACTTGAGAGGTTCAG+AGG 0.536773 8.4:-59911402 None:intergenic
ATGCAAATTTCTAACTTGAG+AGG 0.541031 8.4:-59911410 None:intergenic
GCACTCAAGCAATTTAGGGT+TGG 0.547014 8.4:-59909657 None:intergenic
TCTAGTCCCCAAGGAGGCGG+AGG 0.549338 8.4:-59911875 None:intergenic
AGGGACAGTAACATGGCGTA+TGG 0.554141 8.4:-59911010 None:intergenic
AGATCGCAATAGATTCTCAA+TGG 0.562783 8.4:-59910901 None:intergenic
TTGACGTTAAGAGTTCATAC+AGG 0.565205 8.4:+59911709 MS.gene92430:CDS
TTTGACGTTGTAATCGGCAA+GGG 0.569834 8.4:-59911829 None:intergenic
CCTTGTCCTCCGCCTCCTTG+GGG 0.573766 8.4:+59911869 MS.gene92430:CDS
ACTATTAGGCAAAAGATGAA+AGG 0.575411 8.4:+59909552 MS.gene92430:intron
GATTTGCTAAAGTAATCCGT+TGG 0.578489 8.4:-59911346 None:intergenic
CCTGAAAAGGGACAGTAACA+TGG 0.584351 8.4:-59911017 None:intergenic
TCATCTAGTCCCCAAGGAGG+CGG 0.585179 8.4:-59911878 None:intergenic
AAAATAGGTACATTAGGCAG+AGG 0.589897 8.4:+59910967 MS.gene92430:CDS
TGTATGAACTCTTAACGTCA+AGG 0.595749 8.4:-59911707 None:intergenic
CAAGGAGGCGGAGGACAAGG+TGG 0.596069 8.4:-59911866 None:intergenic
GTTGGAAATTATAAGAGGAA+CGG 0.598920 8.4:-59909639 None:intergenic
CTGTGATCATCTAGTCCCCA+AGG 0.599044 8.4:-59911884 None:intergenic
TGAAACCATTGTTCTTCGAG+AGG 0.606566 8.4:+59911157 MS.gene92430:CDS
GAGGCGGAGGACAAGGTGGA+GGG 0.612344 8.4:-59911862 None:intergenic
AAATAGGTACATTAGGCAGA+GGG 0.612478 8.4:+59910968 MS.gene92430:CDS
GTATGAACTCTTAACGTCAA+GGG 0.613401 8.4:-59911706 None:intergenic
AGACTTCAAGGAGATAAGGA+AGG 0.616472 8.4:-59911129 None:intergenic
TTTGCTGGTATGCAACTCGA+TGG 0.631021 8.4:+59911798 MS.gene92430:CDS
GAATGCAAAATATGGTTGCA+GGG 0.639123 8.4:+59910941 MS.gene92430:CDS
AGGAACCAAATGGAATCACA+AGG 0.704215 8.4:-59911382 None:intergenic
TACCAGCAAAGATCAGACGT+TGG 0.705747 8.4:-59911785 None:intergenic
TGATCATCTAGTCCCCAAGG+AGG 0.743426 8.4:-59911881 None:intergenic
GGATATAGGAAGTACCATGG+GGG 0.773367 8.4:-59911444 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTTAATTAGAAAATTA+AGG + chr8.4:59910097-59910116 MS.gene92430:intron 10.0%
!! TTAAATATGAGTATATAAAT+GGG - chr8.4:59910010-59910029 None:intergenic 10.0%
!! TTTAAATATGAGTATATAAA+TGG - chr8.4:59910011-59910030 None:intergenic 10.0%
!! AGTATAGATATCAAATTTAT+GGG - chr8.4:59910578-59910597 None:intergenic 15.0%
!! ATTAAGGATAATAATAAAAG+AGG + chr8.4:59910113-59910132 MS.gene92430:intron 15.0%
!! GAAGATATTAACAATTAAAT+AGG - chr8.4:59911491-59911510 None:intergenic 15.0%
!! TAAATATGAGTATATAAATG+GGG - chr8.4:59910009-59910028 None:intergenic 15.0%
!! TATAAAATCTCAAAAATAGA+AGG - chr8.4:59910527-59910546 None:intergenic 15.0%
!!! AAATTTTAGACTGATATTTA+AGG - chr8.4:59911622-59911641 None:intergenic 15.0%
!!! CATTATTTTATTATAGCAAT+TGG + chr8.4:59910737-59910756 MS.gene92430:intron 15.0%
!!! TTAAATATCAGTCTAAAATT+TGG + chr8.4:59911621-59911640 MS.gene92430:intron 15.0%
!! AAAATAACAAAGCAAAGAAA+AGG - chr8.4:59911468-59911487 None:intergenic 20.0%
!! AAATATGAGTATATAAATGG+GGG - chr8.4:59910008-59910027 None:intergenic 20.0%
!! ACTCAAATTTGAAAATTTGT+TGG - chr8.4:59909970-59909989 None:intergenic 20.0%
!! ATGTAAGACATTTCTTTATA+AGG - chr8.4:59910720-59910739 None:intergenic 20.0%
!! CAGTATAGATATCAAATTTA+TGG - chr8.4:59910579-59910598 None:intergenic 20.0%
!! TAGAGATAGTGATTTATTTA+AGG + chr8.4:59910360-59910379 MS.gene92430:intron 20.0%
!! TATTGAAATATACCAGAAAA+AGG - chr8.4:59909824-59909843 None:intergenic 20.0%
!!! GTCATTTTTTTAGAAGAATT+TGG - chr8.4:59910200-59910219 None:intergenic 20.0%
!!! TTAAATTTGATACCTTTTTC+TGG + chr8.4:59909809-59909828 MS.gene92430:intron 20.0%
!!! TTGTTTTTTTGATCACTATT+AGG + chr8.4:59909538-59909557 MS.gene92430:intron 20.0%
! AAAAAAGTCTCAAGTCTATA+AGG - chr8.4:59910430-59910449 None:intergenic 25.0%
! AAAATCATCTCTTTCACTTT+AGG - chr8.4:59911738-59911757 None:intergenic 25.0%
! AATAATAGTACTACGTTGTT+AGG + chr8.4:59911206-59911225 MS.gene92430:CDS 25.0%
! TCATATATTCAATATGCTTC+TGG + chr8.4:59909783-59909802 MS.gene92430:intron 25.0%
! TGAAAAACAGGAATCTTTAA+GGG - chr8.4:59909698-59909717 None:intergenic 25.0%
!! GTTCTTACTAACATTTTTCA+CGG - chr8.4:59909615-59909634 None:intergenic 25.0%
!! TAAATTTGAGATCAAGAGTT+AGG - chr8.4:59911536-59911555 None:intergenic 25.0%
!! TCGCAAATCAAATTTTCTTA+TGG + chr8.4:59911101-59911120 MS.gene92430:CDS 25.0%
!!! AATCACTAACAACACTTTTT+TGG - chr8.4:59911574-59911593 None:intergenic 25.0%
!!! AGACTTTTTTGCTTTACATT+GGG + chr8.4:59910440-59910459 MS.gene92430:intron 25.0%
!!! ATCATTTTTGACGTTGTAAT+CGG - chr8.4:59911838-59911857 None:intergenic 25.0%
!!! ATTTGGTTGTATCGATTTAT+TGG + chr8.4:59911638-59911657 MS.gene92430:intron 25.0%
!!! GAGATGATTTTTGAAAATGA+TGG + chr8.4:59911747-59911766 MS.gene92430:CDS 25.0%
!!! TTTGAGATTTTATATGTGCA+TGG + chr8.4:59910533-59910552 MS.gene92430:intron 25.0%
ACTATTAGGCAAAAGATGAA+AGG + chr8.4:59909552-59909571 MS.gene92430:intron 30.0%
ATGCAAATTTCTAACTTGAG+AGG - chr8.4:59911413-59911432 None:intergenic 30.0%
CAAAGCAAAGAAAAGGATAT+AGG - chr8.4:59911461-59911480 None:intergenic 30.0%
CAGATGCAAATGTTTGTAAA+GGG + chr8.4:59911663-59911682 MS.gene92430:intron 30.0%
CTGAAAAACAGGAATCTTTA+AGG - chr8.4:59909699-59909718 None:intergenic 30.0%
GTTGGAAATTATAAGAGGAA+CGG - chr8.4:59909642-59909661 None:intergenic 30.0%
TGAGTATAGTTACGATATGT+TGG + chr8.4:59911274-59911293 MS.gene92430:CDS 30.0%
TTAGGGTTGGAAATTATAAG+AGG - chr8.4:59909647-59909666 None:intergenic 30.0%
! GCATGATGATGATGAATAAA+TGG + chr8.4:59910336-59910355 MS.gene92430:intron 30.0%
! TTATGCATCTTTCTCCTTTT+TGG - chr8.4:59910287-59910306 None:intergenic 30.0%
!! CTTAAAGATTCCTGTTTTTC+AGG + chr8.4:59909697-59909716 MS.gene92430:CDS 30.0%
!! CTTAGTATGATTAGCTTTGT+TGG + chr8.4:59910662-59910681 MS.gene92430:intron 30.0%
!!! GAGACTTTTTTGCTTTACAT+TGG + chr8.4:59910439-59910458 MS.gene92430:intron 30.0%
AAAATAGGTACATTAGGCAG+AGG + chr8.4:59910967-59910986 MS.gene92430:CDS 35.0%
AAATAGGTACATTAGGCAGA+GGG + chr8.4:59910968-59910987 MS.gene92430:CDS 35.0%
AGAAAGATGCATAACAAACG+AGG + chr8.4:59910293-59910312 MS.gene92430:intron 35.0%
AGATCGCAATAGATTCTCAA+TGG - chr8.4:59910904-59910923 None:intergenic 35.0%
ATGTTTGTAAAGGGTCTAGA+TGG + chr8.4:59911672-59911691 MS.gene92430:CDS 35.0%
CAAATGCATACCTGAAAAAC+AGG - chr8.4:59909710-59909729 None:intergenic 35.0%
CATTAGACTTCAAGGAGATA+AGG - chr8.4:59911136-59911155 None:intergenic 35.0%
GAATGCAAAATATGGTTGCA+GGG + chr8.4:59910941-59910960 MS.gene92430:CDS 35.0%
GAGTTTCACATAGCACTTAA+GGG - chr8.4:59909868-59909887 None:intergenic 35.0%
GCAGATGCAAATGTTTGTAA+AGG + chr8.4:59911662-59911681 MS.gene92430:intron 35.0%
GCTGTAATACAGTGTGATAA+TGG + chr8.4:59910792-59910811 MS.gene92430:intron 35.0%
GGGTGAAAAATAGGTACATT+AGG + chr8.4:59910961-59910980 MS.gene92430:CDS 35.0%
GGTTTCATCATTAGACTTCA+AGG - chr8.4:59911144-59911163 None:intergenic 35.0%
GTATGAACTCTTAACGTCAA+GGG - chr8.4:59911709-59911728 None:intergenic 35.0%
TATAAATGGGGGATTGAGTT+AGG - chr8.4:59909997-59910016 None:intergenic 35.0%
TCCACGAATATACATTTCGA+GGG + chr8.4:59909903-59909922 MS.gene92430:intron 35.0%
TGGTTCAAAGTCGAATTTGA+TGG + chr8.4:59910757-59910776 MS.gene92430:intron 35.0%
TGTAGGCAGTAGAAAAGAAT+GGG + chr8.4:59910250-59910269 MS.gene92430:intron 35.0%
TGTATGAACTCTTAACGTCA+AGG - chr8.4:59911710-59911729 None:intergenic 35.0%
TTGACGTTAAGAGTTCATAC+AGG + chr8.4:59911709-59911728 MS.gene92430:CDS 35.0%
TTGTAGGCAGTAGAAAAGAA+TGG + chr8.4:59910249-59910268 MS.gene92430:intron 35.0%
! ATTTTCCTCTCGAAGAACAA+TGG - chr8.4:59911165-59911184 None:intergenic 35.0%
! CTATACTGTCAACGCATTTT+TGG + chr8.4:59910591-59910610 MS.gene92430:intron 35.0%
! CTGCAACCATATTTTGCATT+CGG - chr8.4:59910942-59910961 None:intergenic 35.0%
! GCATTTTTGCCATAAACACA+GGG + chr8.4:59911076-59911095 MS.gene92430:CDS 35.0%
! TGCATTTTTGCCATAAACAC+AGG + chr8.4:59911075-59911094 MS.gene92430:CDS 35.0%
!! AAAGGATATAGGAAGTACCA+TGG - chr8.4:59911450-59911469 None:intergenic 35.0%
!! AAGGATATAGGAAGTACCAT+GGG - chr8.4:59911449-59911468 None:intergenic 35.0%
!! GATTTGCTAAAGTAATCCGT+TGG - chr8.4:59911349-59911368 None:intergenic 35.0%
AACAAAGTCGCATCCTGAAA+AGG - chr8.4:59911033-59911052 None:intergenic 40.0%
ACAAAGTCGCATCCTGAAAA+GGG - chr8.4:59911032-59911051 None:intergenic 40.0%
ACCCTCGAAATGTATATTCG+TGG - chr8.4:59909907-59909926 None:intergenic 40.0%
AGACTTCAAGGAGATAAGGA+AGG - chr8.4:59911132-59911151 None:intergenic 40.0%
AGGAACCAAATGGAATCACA+AGG - chr8.4:59911385-59911404 None:intergenic 40.0%
AGTAATCCGTTGGACATTCT+TGG - chr8.4:59911339-59911358 None:intergenic 40.0%
ATGGTTGCAGGGTGAAAAAT+AGG + chr8.4:59910952-59910971 MS.gene92430:CDS 40.0%
CCATGTCCGAATGCAAAATA+TGG + chr8.4:59910933-59910952 MS.gene92430:CDS 40.0%
CGAATGCAAAATATGGTTGC+AGG + chr8.4:59910940-59910959 MS.gene92430:CDS 40.0%
GAGTTCCTTGTGATTCCATT+TGG + chr8.4:59911377-59911396 MS.gene92430:CDS 40.0%
GCTTGACTTTCTCACTTTAG+AGG + chr8.4:59910172-59910191 MS.gene92430:intron 40.0%
GGAGTTTCACATAGCACTTA+AGG - chr8.4:59909869-59909888 None:intergenic 40.0%
GGGAATCACTTATGCCAAAA+AGG + chr8.4:59910270-59910289 MS.gene92430:intron 40.0%
GTCCACGAATATACATTTCG+AGG + chr8.4:59909902-59909921 MS.gene92430:intron 40.0%
TCGTGGACATAACAACACAA+AGG - chr8.4:59909890-59909909 None:intergenic 40.0%
TGAAACCATTGTTCTTCGAG+AGG + chr8.4:59911157-59911176 MS.gene92430:CDS 40.0%
TGACACTTGTTCCGAAGATT+AGG - chr8.4:59910843-59910862 None:intergenic 40.0%
TGCAGCACTCAAGCAATTTA+GGG - chr8.4:59909664-59909683 None:intergenic 40.0%
TGTTACCAGATCACCGTTAT+CGG - chr8.4:59909941-59909960 None:intergenic 40.0%
TTCTAACTTGAGAGGTTCAG+AGG - chr8.4:59911405-59911424 None:intergenic 40.0%
TTGCAGCACTCAAGCAATTT+AGG - chr8.4:59909665-59909684 None:intergenic 40.0%
TTTCACATAGCACTTAAGGG+AGG - chr8.4:59909865-59909884 None:intergenic 40.0%
TTTGACGTTGTAATCGGCAA+GGG - chr8.4:59911832-59911851 None:intergenic 40.0%
TTTGCGAATCCCTGTGTTTA+TGG - chr8.4:59911088-59911107 None:intergenic 40.0%
! CCATATTTTGCATTCGGACA+TGG - chr8.4:59910936-59910955 None:intergenic 40.0%
! CTTTTGCCAAGAATGTCCAA+CGG + chr8.4:59911330-59911349 MS.gene92430:CDS 40.0%
! GCTGTCAATATTTGCTGCTT+TGG + chr8.4:59911233-59911252 MS.gene92430:CDS 40.0%
! TTCACAACGTTTAGAGCTGA+TGG - chr8.4:59910880-59910899 None:intergenic 40.0%
! TTTTGACGTTGTAATCGGCA+AGG - chr8.4:59911833-59911852 None:intergenic 40.0%
!! AGGATATAGGAAGTACCATG+GGG - chr8.4:59911448-59911467 None:intergenic 40.0%
!! CTACTTGCTGTCCTAATCTT+CGG + chr8.4:59910829-59910848 MS.gene92430:CDS 40.0%
AAACGCCGCATAAGATGATG+CGG - chr8.4:59910231-59910250 None:intergenic 45.0%
ACTTGCCGCATCATCTTATG+CGG + chr8.4:59910223-59910242 MS.gene92430:intron 45.0%
AGAGGTTCAGAGGAACCAAA+TGG - chr8.4:59911395-59911414 None:intergenic 45.0%
CCTGAAAAGGGACAGTAACA+TGG - chr8.4:59911020-59911039 None:intergenic 45.0%
GTGACACAAGTGACCGATAA+CGG + chr8.4:59909925-59909944 MS.gene92430:intron 45.0%
TACCAGCAAAGATCAGACGT+TGG - chr8.4:59911788-59911807 None:intergenic 45.0%
TCATCTTATGCGGCGTTTGT+AGG + chr8.4:59910233-59910252 MS.gene92430:intron 45.0%
TTTGCTGGTATGCAACTCGA+TGG + chr8.4:59911798-59911817 MS.gene92430:CDS 45.0%
! CCATGTTACTGTCCCTTTTC+AGG + chr8.4:59911017-59911036 MS.gene92430:CDS 45.0%
! GCACTCAAGCAATTTAGGGT+TGG - chr8.4:59909660-59909679 None:intergenic 45.0%
!! GGATATAGGAAGTACCATGG+GGG - chr8.4:59911447-59911466 None:intergenic 45.0%
AGGGACAGTAACATGGCGTA+TGG - chr8.4:59911013-59911032 None:intergenic 50.0%
CCAGCTACTGTCAGTCATTG+AGG + chr8.4:59910616-59910635 MS.gene92430:intron 50.0%
CCTCAATGACTGACAGTAGC+TGG - chr8.4:59910619-59910638 None:intergenic 50.0%
GACCAACGTCTGATCTTTGC+TGG + chr8.4:59911783-59911802 MS.gene92430:CDS 50.0%
! AGTGACCGATAACGGTGATC+TGG + chr8.4:59909933-59909952 MS.gene92430:intron 50.0%
!! TACTCAGACTCAGAAGCGTC+TGG - chr8.4:59911260-59911279 None:intergenic 50.0%
ATCAGACGTTGGTCGTGCAC+TGG - chr8.4:59911777-59911796 None:intergenic 55.0%
CGTTGTAATCGGCAAGGGTC+TGG - chr8.4:59911827-59911846 None:intergenic 55.0%
TCAGACGTTGGTCGTGCACT+GGG - chr8.4:59911776-59911795 None:intergenic 55.0%
! CATAACTTGCGCAACCCCCA+TGG + chr8.4:59911430-59911449 MS.gene92430:CDS 55.0%
ACCTTGTCCTCCGCCTCCTT+GGG + chr8.4:59911868-59911887 MS.gene92430:CDS 60.0%
CAAGGAGGCGGAGGACAAGG+TGG - chr8.4:59911869-59911888 None:intergenic 65.0%
CACCTTGTCCTCCGCCTCCT+TGG + chr8.4:59911867-59911886 MS.gene92430:CDS 65.0%
CCTTGTCCTCCGCCTCCTTG+GGG + chr8.4:59911869-59911888 MS.gene92430:CDS 65.0%
GAGGCGGAGGACAAGGTGGA+GGG - chr8.4:59911865-59911884 None:intergenic 65.0%
CCCCAAGGAGGCGGAGGACA+AGG - chr8.4:59911872-59911891 None:intergenic 70.0%
GGAGGCGGAGGACAAGGTGG+AGG - chr8.4:59911866-59911885 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 59909428 59911896 59909428 ID=MS.gene92430
chr8.4 mRNA 59909428 59911896 59909428 ID=MS.gene92430.t1;Parent=MS.gene92430
chr8.4 exon 59909428 59909451 59909428 ID=MS.gene92430.t1.exon1;Parent=MS.gene92430.t1
chr8.4 CDS 59909428 59909451 59909428 ID=cds.MS.gene92430.t1;Parent=MS.gene92430.t1
chr8.4 exon 59909560 59909718 59909560 ID=MS.gene92430.t1.exon2;Parent=MS.gene92430.t1
chr8.4 CDS 59909560 59909718 59909560 ID=cds.MS.gene92430.t1;Parent=MS.gene92430.t1
chr8.4 exon 59910804 59911451 59910804 ID=MS.gene92430.t1.exon3;Parent=MS.gene92430.t1
chr8.4 CDS 59910804 59911451 59910804 ID=cds.MS.gene92430.t1;Parent=MS.gene92430.t1
chr8.4 exon 59911666 59911896 59911666 ID=MS.gene92430.t1.exon4;Parent=MS.gene92430.t1
chr8.4 CDS 59911666 59911896 59911666 ID=cds.MS.gene92430.t1;Parent=MS.gene92430.t1
Gene Sequence

>MS.gene92430

ATGTCTATATTTTCTTGTTTCTTTGTGAGTATTTTGTTTTAATAGCTTGATTTTATTGTACTAGAAGAACGTGATTATGCTTTACTCAAAAACTTGATTTTGATATATATTTGTTTTTTTGATCACTATTAGGCAAAAGATGAAAGGAAGACATGCAACAAAGACAGTGAAGAAATCGTTAATTCCGTGAAAAATGTTAGTAAGAACAGCTCCGTTCCTCTTATAATTTCCAACCCTAAATTGCTTGAGTGCTGCAATTGTTATCAACCCTTAAAGATTCCTGTTTTTCAGGTATGCATTTGATTTATTTGATTTCATAAAGTATTTGCTCTATCTGAGAAGAATTAATCTGATGTCATATATTCAATATGCTTCTGGTCATTAAATTTGATACCTTTTTCTGGTATATTTCAATATTCTATTTAATATACACTCCTCCCTTAAGTGCTATGTGAAACTCCTTTGTGTTGTTATGTCCACGAATATACATTTCGAGGGTGACACAAGTGACCGATAACGGTGATCTGGTAACAAACGATCCAACAAATTTTCAAATTTGAGTTGTACCTAACTCAATCCCCCATTTATATACTCATATTTAAACTTTATCTCATTCAATGTGAGACTTTTGACAAGTAAATCACTTTAGAAGATAAAGTAAGTATTATCAAATGTTAATTAGAAAATTAAGGATAATAATAAAAGAGGTACATCATTACAATCAAGTGTTTTTGAATTGACGAAGCTTGACTTTCTCACTTTAGAGGAGCCAAATTCTTCTAAAAAAATGACATTACTTGCCGCATCATCTTATGCGGCGTTTGTAGGCAGTAGAAAAGAATGGGAATCACTTATGCCAAAAAGGAGAAAGATGCATAACAAACGAGGTCTAGTAGTAAAAAGAGTGAGCATGATGATGATGAATAAATGGTTAGAGATAGTGATTTATTTAAGGAATCACTTTCATTTATTTTAAATGCTTTGATGAGTTAATTTAAGCCTTATAGACTTGAGACTTTTTTGCTTTACATTGGGTTTGAAGATTAGTAACAATGAACTTTGATAAATAATTATGAATGTCTTGAATATTGTATATCCTTCTATTTTTGAGATTTTATATGTGCATGGTACGAACTTCTTGTTTTTTCCCATAAATTTGATATCTATACTGTCAACGCATTTTTGGTGCCAGCTACTGTCAGTCATTGAGGACATAGATTTTAAGAAGAATAAACTTAGTATGATTAGCTTTGTTGGTTATACTTTTGATCGCATAACTTGCTAACAAGCCTTATAAAGAAATGTCTTACATTATTTTATTATAGCAATTGGTTCAAAGTCGAATTTGATGGTTTTGTTTTTTTGCTGTAATACAGTGTGATAATGGTCATATTGTCTGCTCTACTTGCTGTCCTAATCTTCGGAACAAGTGTCACAAGTGCTCATTGTCCATCAGCTCTAAACGTTGTGAAGCCATTGAGAATCTATTGCGATCTATTGAAATGCCATGTCCGAATGCAAAATATGGTTGCAGGGTGAAAAATAGGTACATTAGGCAGAGGGATCATGAAGACGAATGCATCCATACGCCATGTTACTGTCCCTTTTCAGGATGCGACTTTGTTGAATCATCAAAAGTGTTGTCTATGCATTTTTGCCATAAACACAGGGATTCGCAAATCAAATTTTCTTATGGTCAATCCTTCCTTATCTCCTTGAAGTCTAATGATGAAACCATTGTTCTTCGAGAGGAAAATGATGACAAACTATTTATTCTCAATAATAGTACTACGTTGTTAGGAAATGCTGTCAATATTTGCTGCTTTGGTCCAGACGCTTCTGAGTCTGAGTATAGTTACGATATGTTGGCTACGTCTCAGATATGTAAACTGAAATTACACTCTTTTGCCAAGAATGTCCAACGGATTACTTTAGCAAATCTTTCATCAGAGTTCCTTGTGATTCCATTTGGTTCCTCTGAACCTCTCAAGTTAGAAATTTGCATAACTTGCGCAACCCCCATGGTACTTCCTATATCCTTTTCTTTGCTTTGTTATTTTCCTATTTAATTGTTAATATCTTCTTTCTATGTATTGAATTTATATCCTAACTCTTGATCTCAAATTTATCACTATTTCAAATGCCAAAAAAGTGTTGTTAGTGATTTCTATTTTTCTATTATTGATCAGTTCCTTAAATATCAGTCTAAAATTTGGTTGTATCGATTTATTGGCGCAGATGCAAATGTTTGTAAAGGGTCTAGATGGAAAGACAATGACCCTTGACGTTAAGAGTTCATACAGGATGCCTAAAGTGAAAGAGATGATTTTTGAAAATGATGGTATCCCAGTGCACGACCAACGTCTGATCTTTGCTGGTATGCAACTCGATGGCAACCAGACCCTTGCCGATTACAACGTCAAAAATGATTCAACCCTCCACCTTGTCCTCCGCCTCCTTGGGGACTAG

Protein sequence

>MS.gene92430.t1

MSIFSCFFAKDERKTCNKDSEEIVNSVKNVSKNSSVPLIISNPKLLECCNCYQPLKIPVFQCDNGHIVCSTCCPNLRNKCHKCSLSISSKRCEAIENLLRSIEMPCPNAKYGCRVKNRYIRQRDHEDECIHTPCYCPFSGCDFVESSKVLSMHFCHKHRDSQIKFSYGQSFLISLKSNDETIVLREENDDKLFILNNSTTLLGNAVNICCFGPDASESEYSYDMLATSQICKLKLHSFAKNVQRITLANLSSEFLVIPFGSSEPLKLEICITCATPMMQMFVKGLDGKTMTLDVKSSYRMPKVKEMIFENDGIPVHDQRLIFAGMQLDGNQTLADYNVKNDSTLHLVLRLLGD