AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene062461


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062461.t1 MTR_7g024290 84.709 327 39 2 1 326 1 317 0.0 555
MS.gene062461.t1 MTR_5g067400 74.462 325 73 1 1 325 1 315 8.79e-174 484
MS.gene062461.t1 MTR_1g046640 73.926 326 74 2 1 326 1 315 1.59e-171 478
MS.gene062461.t1 MTR_1g046650 71.166 326 83 2 1 326 1 315 2.83e-166 465
MS.gene062461.t1 MTR_1g046650 71.166 326 83 2 1 326 32 346 4.21e-166 466
MS.gene062461.t1 MTR_7g094390 71.296 324 83 1 3 326 164 477 9.01e-161 457
MS.gene062461.t1 MTR_5g076720 68.807 327 89 2 3 326 74 390 1.02e-155 441
MS.gene062461.t1 MTR_1g046650 71.429 301 75 2 26 326 26 315 3.69e-152 429
MS.gene062461.t1 MTR_5g076810 74.460 278 60 2 49 325 2 269 2.83e-142 403
MS.gene062461.t1 MTR_5g076660 66.563 323 95 2 4 323 26 338 4.93e-142 405
MS.gene062461.t1 MTR_5g076370 64.815 324 100 3 4 323 26 339 3.28e-141 403
MS.gene062461.t1 MTR_5g061290 63.222 329 103 4 4 326 11 327 3.45e-141 402
MS.gene062461.t1 MTR_2g038430 61.607 336 106 3 4 326 18 343 1.02e-140 402
MS.gene062461.t1 MTR_5g076520 65.060 332 100 4 1 326 1 322 3.28e-140 399
MS.gene062461.t1 MTR_2g038420 63.415 328 105 3 4 326 18 335 3.28e-138 395
MS.gene062461.t1 MTR_5g076505 65.677 303 91 2 27 326 23 315 2.87e-134 384
MS.gene062461.t1 MTR_5g076820 70.447 291 70 5 1 287 10 288 3.34e-134 383
MS.gene062461.t1 MTR_1g046650 69.261 257 68 2 70 326 1 246 1.57e-123 354
MS.gene062461.t1 MTR_5g076540 70.588 238 60 1 1 238 1 228 4.63e-112 325
MS.gene062461.t1 MTR_5g077020 63.942 208 52 5 53 251 17 210 1.48e-79 242
MS.gene062461.t1 MTR_4g094468 46.288 229 112 3 6 234 92 309 1.27e-65 209
MS.gene062461.t1 MTR_4g058025 70.290 138 30 2 68 204 1 128 8.36e-57 182
MS.gene062461.t1 MTR_5g061310 70.130 77 23 0 250 326 1 77 7.13e-30 109
MS.gene062461.t1 MTR_7g085590 26.000 250 160 4 5 250 57 285 3.72e-21 92.0
MS.gene062461.t1 MTR_7g105080 60.000 75 30 0 251 325 1 75 1.14e-19 84.0
MS.gene062461.t1 MTR_3g092130 60.000 75 30 0 251 325 1 75 1.14e-19 84.0
MS.gene062461.t1 MTR_1g059690 60.000 75 30 0 251 325 1 75 1.14e-19 84.0
MS.gene062461.t1 MTR_4g009980 59.375 64 26 0 263 326 8 71 1.67e-19 81.6
MS.gene062461.t1 MTR_5g092700 60.000 75 30 0 251 325 1 75 1.75e-19 84.0
MS.gene062461.t1 MTR_4g073580 60.000 75 30 0 251 325 1 75 1.75e-19 84.0
MS.gene062461.t1 MTR_8g088060 60.000 75 30 0 251 325 1 75 1.82e-19 84.0
MS.gene062461.t1 MTR_3g017590 25.551 227 149 6 5 220 45 262 1.90e-19 87.4
MS.gene062461.t1 MTR_5g033960 60.000 75 30 0 251 325 1 75 2.04e-19 84.0
MS.gene062461.t1 MTR_7g116360 53.191 94 44 0 232 325 30 123 2.27e-19 86.7
MS.gene062461.t1 MTR_7g116360 55.294 85 38 0 241 325 115 199 3.97e-18 83.2
MS.gene062461.t1 MTR_7g116360 55.294 85 38 0 241 325 191 275 3.97e-18 83.2
MS.gene062461.t1 MTR_3g092130 60.000 75 30 0 251 325 1 75 3.11e-19 83.2
MS.gene062461.t1 MTR_8g038370 27.477 222 139 5 10 220 111 321 4.57e-19 87.0
MS.gene062461.t1 MTR_4g073580 60.000 75 30 0 251 325 1 75 5.33e-19 83.6
MS.gene062461.t1 MTR_4g088485 60.000 75 30 0 251 325 1 75 1.27e-18 83.2
MS.gene062461.t1 MTR_4g088485 60.000 75 30 0 251 325 138 212 1.27e-18 83.2
MS.gene062461.t1 MTR_1g066390 60.000 75 30 0 251 325 1 75 1.34e-18 83.6
MS.gene062461.t1 MTR_1g066390 60.000 75 30 0 251 325 77 151 1.34e-18 83.6
MS.gene062461.t1 MTR_1g066390 60.000 75 30 0 251 325 153 227 1.34e-18 83.6
MS.gene062461.t1 MTR_7g116360 60.000 75 30 0 251 325 1 75 1.62e-18 83.2
MS.gene062461.t1 MTR_7g116360 60.000 75 30 0 251 325 77 151 1.62e-18 83.2
MS.gene062461.t1 MTR_7g116360 60.000 75 30 0 251 325 153 227 1.62e-18 83.2
MS.gene062461.t1 MTR_7g117415 36.000 125 78 1 3 125 53 177 1.86e-18 84.7
MS.gene062461.t1 MTR_3g091510 36.752 117 72 1 10 124 59 175 3.31e-18 84.3
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 1 75 3.58e-18 83.2
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 77 151 3.58e-18 83.2
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 153 227 3.58e-18 83.2
MS.gene062461.t1 MTR_8g027520 35.484 124 78 1 3 124 36 159 3.97e-18 83.6
MS.gene062461.t1 MTR_8g027520 35.484 124 78 1 3 124 45 168 4.03e-18 84.0
MS.gene062461.t1 MTR_6g061930 60.000 75 30 0 251 325 1 75 4.40e-18 83.2
MS.gene062461.t1 MTR_6g061930 60.000 75 30 0 251 325 77 151 4.40e-18 83.2
MS.gene062461.t1 MTR_6g061930 60.000 75 30 0 251 325 214 288 4.40e-18 83.2
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 1 75 4.72e-18 83.2
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 77 151 4.72e-18 83.2
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 153 227 4.72e-18 83.2
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 1 75 4.92e-18 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 77 151 4.92e-18 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 153 227 4.92e-18 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 229 303 4.92e-18 83.6
MS.gene062461.t1 MTR_4g080920 58.667 75 31 0 251 325 77 151 7.83e-18 81.6
MS.gene062461.t1 MTR_4g080920 58.667 75 31 0 251 325 1 75 1.56e-17 80.9
MS.gene062461.t1 MTR_4g080920 49.333 75 38 0 251 325 153 227 9.87e-14 70.1
MS.gene062461.t1 MTR_8g081020 60.000 75 30 0 251 325 1 75 8.46e-18 83.6
MS.gene062461.t1 MTR_8g081020 60.000 75 30 0 251 325 77 151 8.46e-18 83.6
MS.gene062461.t1 MTR_8g081020 60.000 75 30 0 251 325 153 227 8.46e-18 83.6
MS.gene062461.t1 MTR_8g081020 60.000 75 30 0 251 325 229 303 8.46e-18 83.6
MS.gene062461.t1 MTR_8g081020 60.000 75 30 0 251 325 305 379 8.46e-18 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 1 75 8.96e-18 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 77 151 8.96e-18 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 153 227 8.96e-18 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 229 303 8.96e-18 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 305 379 8.96e-18 83.6
MS.gene062461.t1 MTR_4g080797 60.000 75 30 0 251 325 1 75 9.39e-18 83.6
MS.gene062461.t1 MTR_4g080797 60.000 75 30 0 251 325 77 151 9.39e-18 83.6
MS.gene062461.t1 MTR_4g080797 60.000 75 30 0 251 325 153 227 9.39e-18 83.6
MS.gene062461.t1 MTR_4g080797 60.000 75 30 0 251 325 229 303 9.39e-18 83.6
MS.gene062461.t1 MTR_4g080797 60.000 75 30 0 251 325 305 379 9.39e-18 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 1 75 9.39e-18 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 77 151 9.39e-18 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 153 227 9.39e-18 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 229 303 9.39e-18 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 305 379 9.39e-18 83.6
MS.gene062461.t1 MTR_4g091580 60.000 75 30 0 251 325 1 75 9.67e-18 83.6
MS.gene062461.t1 MTR_4g091580 60.000 75 30 0 251 325 77 151 9.67e-18 83.6
MS.gene062461.t1 MTR_4g091580 60.000 75 30 0 251 325 153 227 9.67e-18 83.6
MS.gene062461.t1 MTR_4g091580 60.000 75 30 0 251 325 305 379 9.67e-18 83.6
MS.gene062461.t1 MTR_4g091580 58.667 75 31 0 251 325 229 303 3.09e-17 82.0
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 1 75 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 77 151 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 153 227 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 229 303 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 305 379 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 381 455 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 1 75 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 77 151 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 153 227 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 229 303 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 305 379 1.31e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 381 455 1.31e-17 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 1 75 1.58e-17 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 77 151 1.58e-17 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 153 227 1.58e-17 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 229 303 1.58e-17 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 305 379 1.58e-17 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 381 455 1.58e-17 83.6
MS.gene062461.t1 MTR_4g081010 60.000 75 30 0 251 325 457 531 1.58e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 1 75 1.58e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 77 151 1.58e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 153 227 1.58e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 229 303 1.58e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 305 379 1.58e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 381 455 1.58e-17 83.6
MS.gene062461.t1 MTR_8g018230 60.000 75 30 0 251 325 457 531 1.58e-17 83.6
MS.gene062461.t1 MTR_4g091580 60.000 75 30 0 251 325 1 75 1.76e-17 83.6
MS.gene062461.t1 MTR_4g091580 60.000 75 30 0 251 325 77 151 1.76e-17 83.6
MS.gene062461.t1 MTR_4g091580 60.000 75 30 0 251 325 153 227 1.76e-17 83.6
MS.gene062461.t1 MTR_4g091580 60.000 75 30 0 251 325 229 303 1.76e-17 83.6
MS.gene062461.t1 MTR_4g091580 60.000 75 30 0 251 325 381 455 1.76e-17 83.6
MS.gene062461.t1 MTR_4g091580 60.000 75 30 0 251 325 457 531 1.76e-17 83.6
MS.gene062461.t1 MTR_4g091580 58.667 75 31 0 251 325 305 379 1.78e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 77 151 2.12e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 153 227 2.12e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 229 303 2.12e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 305 379 2.12e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 381 455 2.12e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 457 531 2.12e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 533 607 2.12e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 609 683 2.12e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 685 759 2.12e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 761 835 2.12e-17 83.6
MS.gene062461.t1 MTR_4g088495 60.000 75 30 0 251 325 1 75 2.52e-17 83.2
MS.gene062461.t1 MTR_1g008120 35.897 117 73 1 10 124 67 183 4.68e-17 80.9
MS.gene062461.t1 MTR_8g479250 55.294 85 38 0 241 325 131 215 1.39e-16 79.3
MS.gene062461.t1 MTR_8g479250 47.561 82 32 1 241 322 207 277 2.49e-11 63.9
MS.gene062461.t1 MTR_1g054335 26.484 219 143 6 11 220 58 267 2.63e-16 78.6
MS.gene062461.t1 MTR_7g093600 26.027 219 144 6 11 220 59 268 1.56e-15 76.3
MS.gene062461.t1 MTR_5g076760 61.404 57 22 0 261 317 5 61 1.88e-15 70.9
MS.gene062461.t1 MTR_5g076350 50.649 77 37 1 251 326 8 84 2.92e-14 67.8
MS.gene062461.t1 MTR_5g076740 52.632 76 35 1 251 325 86 161 1.11e-13 68.6
MS.gene062461.t1 MTR_5g076780 54.839 62 28 0 262 323 1 62 1.39e-13 65.5
MS.gene062461.t1 MTR_5g076340 50.000 78 37 2 251 326 9 86 5.44e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062461.t1 AT5G37930 35.081 248 147 3 4 247 103 340 8.63e-45 156
MS.gene062461.t1 AT5G37870 31.890 254 158 6 6 253 37 281 1.00e-37 136
MS.gene062461.t1 AT5G37890 33.047 233 134 4 10 234 47 265 1.44e-36 133
MS.gene062461.t1 AT1G66660 32.283 254 158 7 2 248 94 340 2.36e-36 134
MS.gene062461.t1 AT1G66620 32.669 251 150 5 5 247 35 274 1.40e-35 131
MS.gene062461.t1 AT1G66650 31.474 251 159 6 4 247 76 320 2.57e-34 128
MS.gene062461.t1 AT1G66630 30.682 264 155 5 5 247 40 296 2.73e-34 127
MS.gene062461.t1 AT5G37910 30.645 248 158 5 11 256 35 270 1.97e-31 119
MS.gene062461.t1 AT5G62800 31.034 261 165 7 11 264 40 292 4.83e-29 114
MS.gene062461.t1 AT5G62800 35.354 198 112 5 11 200 40 229 2.31e-28 112
MS.gene062461.t1 AT2G47110 60.000 75 30 0 251 325 1 75 1.32e-19 84.7
MS.gene062461.t1 AT2G47110 60.000 75 30 0 251 325 1 75 1.32e-19 84.7
MS.gene062461.t1 AT1G23410 60.000 75 30 0 251 325 1 75 1.48e-19 84.3
MS.gene062461.t1 AT3G52590 60.000 75 30 0 251 325 1 75 1.63e-19 83.6
MS.gene062461.t1 AT2G36170 60.000 75 30 0 251 325 1 75 1.63e-19 83.6
MS.gene062461.t1 AT3G62250 60.000 75 30 0 251 325 1 75 1.67e-19 84.3
MS.gene062461.t1 AT2G35635 60.000 75 30 0 251 325 1 75 2.83e-19 83.6
MS.gene062461.t1 AT1G31340 60.000 75 30 0 251 325 1 75 2.94e-19 83.6
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 1 75 3.28e-19 83.2
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 77 151 3.28e-19 83.2
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 1 75 3.28e-19 83.2
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 77 151 3.28e-19 83.2
MS.gene062461.t1 AT5G37640 56.471 85 37 0 241 325 69 153 1.03e-18 85.5
MS.gene062461.t1 AT5G37640 60.000 75 30 0 251 325 155 229 2.90e-17 81.6
MS.gene062461.t1 AT5G37640 59.211 76 30 1 251 325 231 306 4.66e-17 80.9
MS.gene062461.t1 AT5G37640 56.000 75 33 0 251 325 3 77 8.48e-15 74.3
MS.gene062461.t1 AT3G61790 35.484 124 78 1 3 124 52 175 1.16e-18 85.5
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 1 75 1.70e-18 83.2
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 77 151 1.70e-18 83.2
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 153 227 1.70e-18 83.2
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 1 75 1.70e-18 83.2
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 77 151 1.70e-18 83.2
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 153 227 1.70e-18 83.2
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 1 75 1.70e-18 83.2
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 77 151 1.70e-18 83.2
MS.gene062461.t1 AT4G05050 60.000 75 30 0 251 325 153 227 1.70e-18 83.2
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 1 75 1.70e-18 83.2
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 77 151 1.70e-18 83.2
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 153 227 1.70e-18 83.2
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 1 75 1.70e-18 83.2
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 77 151 1.70e-18 83.2
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 153 227 1.70e-18 83.2
MS.gene062461.t1 AT1G66660 28.638 213 136 8 43 248 13 216 2.05e-18 83.2
MS.gene062461.t1 AT1G65350 60.000 75 30 0 251 325 152 226 3.35e-18 84.3
MS.gene062461.t1 AT1G65350 60.000 75 30 0 251 325 1 75 4.53e-18 84.0
MS.gene062461.t1 AT1G65350 58.667 75 30 1 251 325 77 150 2.26e-15 75.9
MS.gene062461.t1 AT1G65350 48.315 89 32 2 251 325 228 316 7.67e-12 65.9
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 1 75 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 77 151 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 153 227 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 229 303 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 1 75 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 77 151 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 153 227 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 229 303 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 1 75 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 77 151 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 153 227 4.51e-18 83.6
MS.gene062461.t1 AT5G03240 60.000 75 30 0 251 325 229 303 4.51e-18 83.6
MS.gene062461.t1 AT5G20620 60.000 75 30 0 251 325 1 75 4.51e-18 83.6
MS.gene062461.t1 AT5G20620 60.000 75 30 0 251 325 77 151 4.51e-18 83.6
MS.gene062461.t1 AT5G20620 60.000 75 30 0 251 325 153 227 4.51e-18 83.6
MS.gene062461.t1 AT5G20620 60.000 75 30 0 251 325 229 303 4.51e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 1 75 4.81e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 77 151 4.81e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 153 227 4.81e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 229 303 4.81e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 1 75 4.81e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 77 151 4.81e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 153 227 4.81e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 229 303 4.81e-18 83.6
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 1 75 4.81e-18 83.6
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 77 151 4.81e-18 83.6
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 153 227 4.81e-18 83.6
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 229 303 4.81e-18 83.6
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 1 75 4.81e-18 83.6
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 77 151 4.81e-18 83.6
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 153 227 4.81e-18 83.6
MS.gene062461.t1 AT4G02890 60.000 75 30 0 251 325 229 303 4.81e-18 83.6
MS.gene062461.t1 AT1G55060 58.667 75 31 0 251 325 77 151 5.04e-18 82.0
MS.gene062461.t1 AT1G55060 54.118 85 39 0 241 325 143 227 1.04e-17 81.3
MS.gene062461.t1 AT1G55060 53.333 75 35 0 251 325 1 75 2.23e-14 72.0
MS.gene062461.t1 AT5G20620 60.000 75 30 0 251 325 1 75 9.09e-18 83.6
MS.gene062461.t1 AT5G20620 60.000 75 30 0 251 325 77 151 9.09e-18 83.6
MS.gene062461.t1 AT5G20620 60.000 75 30 0 251 325 153 227 9.09e-18 83.6
MS.gene062461.t1 AT5G20620 60.000 75 30 0 251 325 229 303 9.09e-18 83.6
MS.gene062461.t1 AT5G20620 60.000 75 30 0 251 325 305 379 9.09e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 1 75 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 77 151 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 153 227 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 229 303 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 305 379 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 1 75 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 77 151 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 153 227 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 229 303 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 305 379 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 1 75 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 77 151 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 153 227 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 229 303 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 305 379 9.84e-18 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 1 75 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 77 151 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 153 227 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 229 303 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 305 379 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 381 455 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 1 75 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 77 151 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 153 227 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 229 303 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 305 379 1.37e-17 83.6
MS.gene062461.t1 AT4G05320 60.000 75 30 0 251 325 381 455 1.37e-17 83.6
MS.gene062461.t1 AT3G09790 56.471 85 37 0 241 325 69 153 1.55e-17 84.0
MS.gene062461.t1 AT3G09790 57.333 75 32 0 251 325 3 77 5.05e-16 79.3
MS.gene062461.t1 AT3G09790 57.534 73 29 1 251 321 319 391 4.13e-14 73.6
MS.gene062461.t1 AT3G09790 56.164 73 32 0 251 323 552 624 6.35e-14 72.8
MS.gene062461.t1 AT3G09790 56.471 85 37 0 241 325 69 153 1.55e-17 84.0
MS.gene062461.t1 AT3G09790 57.333 75 32 0 251 325 3 77 5.05e-16 79.3
MS.gene062461.t1 AT3G09790 57.534 73 29 1 251 321 319 391 4.13e-14 73.6
MS.gene062461.t1 AT3G09790 56.164 73 32 0 251 323 552 624 6.35e-14 72.8
MS.gene062461.t1 AT4G27880 35.878 131 77 3 10 133 60 190 3.17e-17 81.6
MS.gene062461.t1 AT2G41980 25.098 255 166 8 10 248 53 298 2.59e-16 78.6
MS.gene062461.t1 AT3G58040 25.957 235 155 7 10 234 56 281 2.78e-16 78.6
MS.gene062461.t1 AT3G58040 25.957 235 155 7 10 234 56 281 2.78e-16 78.6
MS.gene062461.t1 AT3G58040 33.333 117 76 1 10 124 56 172 5.91e-16 76.3
MS.gene062461.t1 AT1G66610 25.085 295 149 8 5 234 47 334 8.61e-15 74.7
MS.gene062461.t1 AT1G53930 52.703 74 35 0 250 323 85 158 1.13e-14 70.9
MS.gene062461.t1 AT1G66610 44.444 81 45 0 5 85 152 232 1.17e-14 72.8
MS.gene062461.t1 AT1G66610 47.619 63 33 0 11 73 53 115 2.94e-12 65.9
MS.gene062461.t1 AT5G37900 27.322 183 115 5 59 234 48 219 2.45e-12 66.2

Find 65 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATAATGCTACTATGAATT+TGG 0.079505 7.3:+75697002 MS.gene062461:CDS
TGCATTGGTCCTAACTCTTT+TGG 0.139101 7.3:+75697045 MS.gene062461:CDS
CCATGTTACTGTCCCCTTTC+AGG 0.141370 7.3:+75696784 MS.gene062461:CDS
TCTAAGTATTCCTGTCTTTC+AGG 0.178018 7.3:+75695112 MS.gene062461:CDS
CTTCTCTTGGATGTTGTAAT+TGG 0.203344 7.3:-75697763 None:intergenic
CACCTCGTCCTCCGCCTCAT+TGG 0.215631 7.3:+75697795 MS.gene062461:CDS
ACCTCGTCCTCCGCCTCATT+GGG 0.219836 7.3:+75697796 MS.gene062461:CDS
AAATGAGTTACACTGGAAAT+AGG 0.344851 7.3:+75696734 MS.gene062461:CDS
TGACACTTGTTCCTAAGTTT+AGG 0.348740 7.3:-75696607 None:intergenic
CGAGTATAGTTATGATATAT+TGG 0.382189 7.3:+75697071 MS.gene062461:CDS
AATAATGCTACTATGAATTT+GGG 0.385162 7.3:+75697003 MS.gene062461:CDS
ATTGTCTCCTTGAAGTCTAA+TGG 0.388929 7.3:+75696931 MS.gene062461:CDS
CAAATGCAAAACATGGTTGC+AGG 0.393656 7.3:+75696707 MS.gene062461:CDS
CCCCATGTTTATGGCTGAAA+TGG 0.405710 7.3:-75696843 None:intergenic
ATGCAACGTCTGATCTTTGA+TGG 0.409178 7.3:+75697711 MS.gene062461:CDS
GGTGGAGGGTTGACTTCTCT+TGG 0.426648 7.3:-75697776 None:intergenic
TGAGGCGGAGGACGAGGTGG+AGG 0.428809 7.3:-75697791 None:intergenic
GCAGTCAATATTTGCTGCAT+TGG 0.437797 7.3:+75697030 MS.gene062461:CDS
CCCCAATGAGGCGGAGGACG+AGG 0.449082 7.3:-75697797 None:intergenic
AACAAAGTCACAACCTGAAA+GGG 0.450677 7.3:-75696797 None:intergenic
GGTTCCACCATTAGACTTCA+AGG 0.451128 7.3:-75696938 None:intergenic
AGAGGTTCAGAAGAACGAAA+TGG 0.462744 7.3:-75697189 None:intergenic
GTTGTAATTCAGTGTGATAA+TGG 0.467413 7.3:+75696559 MS.gene062461:intron
CTTGGATGTTGTAATTGGCA+AGG 0.467473 7.3:-75697758 None:intergenic
TGAAAGACAGGAATACTTAG+AGG 0.482175 7.3:-75695110 None:intergenic
TGTCTGAACTCTTAACCCTC+AGG 0.482923 7.3:-75697635 None:intergenic
TACTCGGACCCAAAAGAGTT+AGG 0.489170 7.3:-75697054 None:intergenic
GTTCCTAAGTTTAGGACAGC+AGG 0.503985 7.3:-75696599 None:intergenic
CTACCTGCTGTCCTAAACTT+AGG 0.504618 7.3:+75696596 MS.gene062461:CDS
TGTTGTAATTGGCAAGGGTC+AGG 0.504632 7.3:-75697752 None:intergenic
CAATATATCATAACTATACT+CGG 0.508438 7.3:-75697070 None:intergenic
CAAATGCATACCTGAAAGAC+AGG 0.508688 7.3:-75695122 None:intergenic
ATGCAAATTTCTAGCTTGAG+AGG 0.533709 7.3:-75697207 None:intergenic
GTCTGAACTCTTAACCCTCA+GGG 0.537566 7.3:-75697634 None:intergenic
CAACAAAGTCACAACCTGAA+AGG 0.540955 7.3:-75696798 None:intergenic
TTGGATGTTGTAATTGGCAA+GGG 0.555821 7.3:-75697757 None:intergenic
AACCATTTCAGCCATAAACA+TGG 0.562638 7.3:+75696841 MS.gene062461:CDS
TCAGACGTTGCATGTGCACC+TGG 0.565223 7.3:-75697701 None:intergenic
ACCATTTCAGCCATAAACAT+GGG 0.588005 7.3:+75696842 MS.gene062461:CDS
ATGTTTATGGCTGAAATGGT+TGG 0.588725 7.3:-75696839 None:intergenic
TCTAGTCCCCAATGAGGCGG+AGG 0.594709 7.3:-75697803 None:intergenic
TGGAACCATTGTTCTTCAAG+AGG 0.598400 7.3:+75696954 MS.gene062461:CDS
CCTGAAAGGGGACAGTAACA+TGG 0.599066 7.3:-75696784 None:intergenic
GAGGCGGAGGACGAGGTGGA+GGG 0.599287 7.3:-75697790 None:intergenic
CCTCGTCCTCCGCCTCATTG+GGG 0.602662 7.3:+75697797 MS.gene062461:CDS
AAATGCAAAACATGGTTGCA+GGG 0.602953 7.3:+75696708 MS.gene062461:CDS
TTAGAGTTTGAAATCGTCAG+AGG 0.607477 7.3:-75695059 None:intergenic
GGGGATCATCTTCGTAGTTG+GGG 0.607602 7.3:-75697613 None:intergenic
AGACTTCAAGGAGACAATGA+AGG 0.608582 7.3:-75696926 None:intergenic
CAATGAGGCGGAGGACGAGG+TGG 0.608928 7.3:-75697794 None:intergenic
GAGTTGCTAAAGTAAACTGT+TGG 0.616702 7.3:-75697143 None:intergenic
GTTCTTCAAGAGGAAAATGA+CGG 0.617899 7.3:+75696964 MS.gene062461:CDS
CCATTTCAGCCATAAACATG+GGG 0.621391 7.3:+75696843 MS.gene062461:CDS
GTCTCCTTGAAGTCTAATGG+TGG 0.621511 7.3:+75696934 MS.gene062461:CDS
AGGGAGAAAATGAGTTACAC+TGG 0.636460 7.3:+75696727 MS.gene062461:CDS
CCATGTCCAAATGCAAAACA+TGG 0.644251 7.3:+75696700 MS.gene062461:CDS
ACAAAGTCACAACCTGAAAG+GGG 0.645303 7.3:-75696796 None:intergenic
CTGAACTCTTAACCCTCAGG+GGG 0.662405 7.3:-75697632 None:intergenic
AGACACAGTAGCCAATGTGA+AGG 0.670298 7.3:+75697653 MS.gene062461:CDS
TCTGAACTCTTAACCCTCAG+GGG 0.679402 7.3:-75697633 None:intergenic
TCATCTAGTCCCCAATGAGG+CGG 0.679966 7.3:-75697806 None:intergenic
AAGAACGAAATGGAATCACA+AGG 0.699518 7.3:-75697179 None:intergenic
TGGTCATCTAGTCCCCAATG+AGG 0.703849 7.3:-75697809 None:intergenic
GGAGATAGGCGGTACCATGG+GGG 0.718009 7.3:-75697232 None:intergenic
CATTTCAGCCATAAACATGG+GGG 0.731821 7.3:+75696844 MS.gene062461:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAAAAAAAAAATTTCTTA+TGG + chr7.3:75696898-75696917 MS.gene062461:CDS 10.0%
!!! ATATTCTTTTATTGATTTAA+TGG + chr7.3:75697557-75697576 MS.gene062461:intron 10.0%
!!! GAGTATTATAATTTTTTTTA+AGG + chr7.3:75695996-75696015 MS.gene062461:intron 10.0%
!! AAAAAAAAAAAGCAAAGAAA+AGG - chr7.3:75697256-75697275 None:intergenic 15.0%
!! AATAAAATAGTTTCTTTCAA+TGG + chr7.3:75695968-75695987 MS.gene062461:intron 15.0%
!! ATAAAATAGTTTCTTTCAAT+GGG + chr7.3:75695969-75695988 MS.gene062461:intron 15.0%
!! CTAAATATGAGTATATAATT+GGG - chr7.3:75695501-75695520 None:intergenic 15.0%
!! GAAAATAATAAGACTTTAAT+TGG - chr7.3:75697284-75697303 None:intergenic 15.0%
!! TAAATATGAGTATATAATTG+GGG - chr7.3:75695500-75695519 None:intergenic 15.0%
!!! AGAAACTATTTTATTTTGTT+AGG - chr7.3:75695963-75695982 None:intergenic 15.0%
!! AAAATTTATTACAGTACAAC+AGG - chr7.3:75697477-75697496 None:intergenic 20.0%
!! AAATATGAGTATATAATTGG+GGG - chr7.3:75695499-75695518 None:intergenic 20.0%
!! AAATTTATTACAGTACAACA+GGG - chr7.3:75697476-75697495 None:intergenic 20.0%
!! AATAAAATTAAGTGAAAGAG+AGG + chr7.3:75695928-75695947 MS.gene062461:intron 20.0%
!! AATAATGCTACTATGAATTT+GGG + chr7.3:75697003-75697022 MS.gene062461:CDS 20.0%
!! ATAGATTCTGATAATATCTT+AGG + chr7.3:75695419-75695438 MS.gene062461:intron 20.0%
!! ATATATATGCAATATGTTTC+TGG + chr7.3:75695191-75695210 MS.gene062461:intron 20.0%
!! ATTAATTAGAAAATGCATGA+TGG + chr7.3:75695577-75695596 MS.gene062461:intron 20.0%
!! CAATATATCATAACTATACT+CGG - chr7.3:75697073-75697092 None:intergenic 20.0%
!! CCAATTATATACTCATATTT+AGG + chr7.3:75695499-75695518 MS.gene062461:intron 20.0%
!! CCTAAATATGAGTATATAAT+TGG - chr7.3:75695502-75695521 None:intergenic 20.0%
!! TAAAATAGTTTCTTTCAATG+GGG + chr7.3:75695970-75695989 MS.gene062461:intron 20.0%
!! TATAAAAGCTCAAAAATAGA+AGG - chr7.3:75696275-75696294 None:intergenic 20.0%
!!! ACTTGATTTTCTCAATTTAA+AGG + chr7.3:75695646-75695665 MS.gene062461:intron 20.0%
!!! CTAACAAAACAACTTTATTT+TGG - chr7.3:75697366-75697385 None:intergenic 20.0%
!!! TCTCAAATCAAATTTTCTTA+TGG + chr7.3:75696868-75696887 MS.gene062461:CDS 20.0%
!!! TTTTATTGATTTAATGGCAA+TGG + chr7.3:75697563-75697582 MS.gene062461:intron 20.0%
! AAAATAGTTTCTTTCAATGG+GGG + chr7.3:75695971-75695990 MS.gene062461:intron 25.0%
! AAAATCAATGTACTCAAAGA+CGG - chr7.3:75696397-75696416 None:intergenic 25.0%
! AAAGTTTAGAGAAACAATAC+AGG - chr7.3:75696313-75696332 None:intergenic 25.0%
! AACATAGAATTCACTTTAGT+GGG + chr7.3:75695544-75695563 MS.gene062461:intron 25.0%
! CAATAATGCTACTATGAATT+TGG + chr7.3:75697002-75697021 MS.gene062461:CDS 25.0%
! CGAGTATAGTTATGATATAT+TGG + chr7.3:75697071-75697090 MS.gene062461:CDS 25.0%
! CTATAGAGACAAAACAATTA+GGG + chr7.3:75695735-75695754 MS.gene062461:intron 25.0%
! TAACATAGAATTCACTTTAG+TGG + chr7.3:75695543-75695562 MS.gene062461:intron 25.0%
!! AAGACTTGTTTGATTTACAT+TGG + chr7.3:75696187-75696206 MS.gene062461:intron 25.0%
!! AGACTTGTTTGATTTACATT+GGG + chr7.3:75696188-75696207 MS.gene062461:intron 25.0%
!! CTATACTGCTATAGTATTTT+GGG + chr7.3:75696358-75696377 MS.gene062461:intron 25.0%
!! CTTTATTTGATTCTAGCAAA+TGG + chr7.3:75696505-75696524 MS.gene062461:intron 25.0%
!! GCATTTTATCTCAAATTCAT+CGG + chr7.3:75697329-75697348 MS.gene062461:intron 25.0%
!! TGTATTGTTTCTCTAAACTT+TGG + chr7.3:75696312-75696331 MS.gene062461:intron 25.0%
!!! AATTGCGTTTTGATTTTACT+GGG - chr7.3:75695840-75695859 None:intergenic 25.0%
!!! CTAATTGTTTTGTCTCTATA+GGG - chr7.3:75695736-75695755 None:intergenic 25.0%
!!! CTCGGTTCTATTTTTAAAAT+AGG + chr7.3:75695813-75695832 MS.gene062461:intron 25.0%
!!! TGGTTCAAAGTTTAATTTGA+CGG + chr7.3:75696525-75696544 MS.gene062461:intron 25.0%
AAAAATCATCTCCTTCACAT+TGG - chr7.3:75697667-75697686 None:intergenic 30.0%
AAAAGCAAAGAAAAGGAGAT+AGG - chr7.3:75697249-75697268 None:intergenic 30.0%
AAATACTATAGCAGTATAGC+AGG - chr7.3:75696357-75696376 None:intergenic 30.0%
AAATAGTTTCTTTCAATGGG+GGG + chr7.3:75695972-75695991 MS.gene062461:intron 30.0%
AAATGAGTTACACTGGAAAT+AGG + chr7.3:75696734-75696753 MS.gene062461:CDS 30.0%
ATAGATGCATAACAAATGAC+AGG + chr7.3:75695768-75695787 MS.gene062461:intron 30.0%
ATCTATCCAAAAAAATCCGT+TGG - chr7.3:75695405-75695424 None:intergenic 30.0%
CCTATAGAGACAAAACAATT+AGG + chr7.3:75695734-75695753 MS.gene062461:intron 30.0%
GTTGTAATTCAGTGTGATAA+TGG + chr7.3:75696559-75696578 MS.gene062461:intron 30.0%
TAGATGCATAACAAATGACA+GGG + chr7.3:75695769-75695788 MS.gene062461:intron 30.0%
TAGTAGGAAACAGAAAAGAA+TGG + chr7.3:75695697-75695716 MS.gene062461:intron 30.0%
TTCTCTAAACTTTGGTATTG+TGG + chr7.3:75696320-75696339 MS.gene062461:intron 30.0%
! ATTTTCCTCTTGAAGAACAA+TGG - chr7.3:75696962-75696981 None:intergenic 30.0%
! GATCAATGTGTTGTTAATTG+CGG + chr7.3:75697523-75697542 MS.gene062461:intron 30.0%
! GCTATACTGCTATAGTATTT+TGG + chr7.3:75696357-75696376 MS.gene062461:intron 30.0%
!! AAATGCATGATGGATATTGA+AGG + chr7.3:75695587-75695606 MS.gene062461:intron 30.0%
!! CAGTTTTGTAAAGTTGAGTT+AGG - chr7.3:75695457-75695476 None:intergenic 30.0%
!! CCTAATTGTTTTGTCTCTAT+AGG - chr7.3:75695737-75695756 None:intergenic 30.0%
!! CTTTACAAAACTGACTTGTA+AGG + chr7.3:75695464-75695483 MS.gene062461:intron 30.0%
!!! ATGTGTTTTTTAAGCCTTAG+AGG + chr7.3:75696162-75696181 MS.gene062461:intron 30.0%
!!! ATTGCGTTTTGATTTTACTG+GGG - chr7.3:75695839-75695858 None:intergenic 30.0%
!!! GAATTGCGTTTTGATTTTAC+TGG - chr7.3:75695841-75695860 None:intergenic 30.0%
AAATGCAAAACATGGTTGCA+GGG + chr7.3:75696708-75696727 MS.gene062461:CDS 35.0%
AACAAAGTCACAACCTGAAA+GGG - chr7.3:75696800-75696819 None:intergenic 35.0%
AACCATTTCAGCCATAAACA+TGG + chr7.3:75696841-75696860 MS.gene062461:CDS 35.0%
AAGAACGAAATGGAATCACA+AGG - chr7.3:75697182-75697201 None:intergenic 35.0%
ACCATTTCAGCCATAAACAT+GGG + chr7.3:75696842-75696861 MS.gene062461:CDS 35.0%
ACTACTAGACATCATTTGTC+AGG - chr7.3:75696079-75696098 None:intergenic 35.0%
ATGTTTATGGCTGAAATGGT+TGG - chr7.3:75696842-75696861 None:intergenic 35.0%
ATTGTCTCCTTGAAGTCTAA+TGG + chr7.3:75696931-75696950 MS.gene062461:CDS 35.0%
CTACTAGACATCATTTGTCA+GGG - chr7.3:75696078-75696097 None:intergenic 35.0%
CTTCTCTTGGATGTTGTAAT+TGG - chr7.3:75697766-75697785 None:intergenic 35.0%
GAGTTGCTAAAGTAAACTGT+TGG - chr7.3:75697146-75697165 None:intergenic 35.0%
GTTCTTCAAGAGGAAAATGA+CGG + chr7.3:75696964-75696983 MS.gene062461:CDS 35.0%
TCTAAGTATTCCTGTCTTTC+AGG + chr7.3:75695112-75695131 MS.gene062461:CDS 35.0%
TGAAAGACAGGAATACTTAG+AGG - chr7.3:75695113-75695132 None:intergenic 35.0%
TGACACTTGTTCCTAAGTTT+AGG - chr7.3:75696610-75696629 None:intergenic 35.0%
TTGGATGTTGTAATTGGCAA+GGG - chr7.3:75697760-75697779 None:intergenic 35.0%
! AACCGAACCTCTAAAAACTA+TGG - chr7.3:75696023-75696042 None:intergenic 35.0%
! ACCGAACCTCTAAAAACTAT+GGG - chr7.3:75696022-75696041 None:intergenic 35.0%
! TTAGAGTTTGAAATCGTCAG+AGG - chr7.3:75695062-75695081 None:intergenic 35.0%
!! ATGCAAATTTCTAGCTTGAG+AGG - chr7.3:75697210-75697229 None:intergenic 35.0%
!! TAGTTTTTAGAGGTTCGGTT+CGG + chr7.3:75696023-75696042 MS.gene062461:intron 35.0%
!! TTAAGGCCCATAGTTTTTAG+AGG + chr7.3:75696013-75696032 MS.gene062461:intron 35.0%
ACAAAGTCACAACCTGAAAG+GGG - chr7.3:75696799-75696818 None:intergenic 40.0%
AGAAATTTGCATAACCCCCA+TGG + chr7.3:75697218-75697237 MS.gene062461:CDS 40.0%
AGACTTCAAGGAGACAATGA+AGG - chr7.3:75696929-75696948 None:intergenic 40.0%
AGAGGTTCAGAAGAACGAAA+TGG - chr7.3:75697192-75697211 None:intergenic 40.0%
AGCAAAGAAAAGGAGATAGG+CGG - chr7.3:75697246-75697265 None:intergenic 40.0%
AGCCTCCTATTTCATAGGAA+CGG - chr7.3:75695795-75695814 None:intergenic 40.0%
AGGGAGAAAATGAGTTACAC+TGG + chr7.3:75696727-75696746 MS.gene062461:CDS 40.0%
ATGCAACGTCTGATCTTTGA+TGG + chr7.3:75697711-75697730 MS.gene062461:CDS 40.0%
ATTGGCTAATAGTGGTGATC+TGG + chr7.3:75695368-75695387 MS.gene062461:intron 40.0%
CAAACAAGTCTTTGCCTCTA+AGG - chr7.3:75696179-75696198 None:intergenic 40.0%
CAAATGCAAAACATGGTTGC+AGG + chr7.3:75696707-75696726 MS.gene062461:CDS 40.0%
CAAATGCATACCTGAAAGAC+AGG - chr7.3:75695125-75695144 None:intergenic 40.0%
CAACAAAGTCACAACCTGAA+AGG - chr7.3:75696801-75696820 None:intergenic 40.0%
CAGTATAGCAGGTAGCAATA+TGG - chr7.3:75696346-75696365 None:intergenic 40.0%
CATTTCAGCCATAAACATGG+GGG + chr7.3:75696844-75696863 MS.gene062461:CDS 40.0%
CCATGTCCAAATGCAAAACA+TGG + chr7.3:75696700-75696719 MS.gene062461:CDS 40.0%
CCATTTCAGCCATAAACATG+GGG + chr7.3:75696843-75696862 MS.gene062461:CDS 40.0%
CTTGGATGTTGTAATTGGCA+AGG - chr7.3:75697761-75697780 None:intergenic 40.0%
GATCACCACTATTAGCCAAT+CGG - chr7.3:75695368-75695387 None:intergenic 40.0%
TGGAACCATTGTTCTTCAAG+AGG + chr7.3:75696954-75696973 MS.gene062461:CDS 40.0%
TTCCTATGAAATAGGAGGCT+CGG + chr7.3:75695795-75695814 MS.gene062461:intron 40.0%
TTGTCTCTATAGGGACATCT+TGG - chr7.3:75695727-75695746 None:intergenic 40.0%
TTTGAGAACCCCCATGTTTA+TGG - chr7.3:75696855-75696874 None:intergenic 40.0%
! CCATGTTTTGCATTTGGACA+TGG - chr7.3:75696703-75696722 None:intergenic 40.0%
! CTGCAACCATGTTTTGCATT+TGG - chr7.3:75696709-75696728 None:intergenic 40.0%
! GCAGTCAATATTTGCTGCAT+TGG + chr7.3:75697030-75697049 MS.gene062461:CDS 40.0%
! GTAATCCGATTGGCTAATAG+TGG + chr7.3:75695360-75695379 MS.gene062461:intron 40.0%
! TTTTCCCTCCTCATCTTATG+CGG + chr7.3:75695672-75695691 MS.gene062461:intron 40.0%
! TTTTGACAAGACACAGTACC+AGG + chr7.3:75697683-75697702 MS.gene062461:CDS 40.0%
!! CAAAACTGACTTGTAAGGTG+AGG + chr7.3:75695469-75695488 MS.gene062461:intron 40.0%
!! GCATTGGTCCTAACTCTTTT+GGG + chr7.3:75697046-75697065 MS.gene062461:CDS 40.0%
!! GCCCATAGTTTTTAGAGGTT+CGG + chr7.3:75696018-75696037 MS.gene062461:intron 40.0%
!! TGCATTGGTCCTAACTCTTT+TGG + chr7.3:75697045-75697064 MS.gene062461:CDS 40.0%
AACCGAGCCTCCTATTTCAT+AGG - chr7.3:75695800-75695819 None:intergenic 45.0%
AATAGTGGTGATCTGGTAGC+AGG + chr7.3:75695375-75695394 MS.gene062461:intron 45.0%
AGACACAGTAGCCAATGTGA+AGG + chr7.3:75697653-75697672 MS.gene062461:CDS 45.0%
CATCTTGAGCGTAATCCGAT+TGG + chr7.3:75695350-75695369 MS.gene062461:intron 45.0%
CCCCATGTTTATGGCTGAAA+TGG - chr7.3:75696846-75696865 None:intergenic 45.0%
CTACCTGCTGTCCTAAACTT+AGG + chr7.3:75696596-75696615 MS.gene062461:CDS 45.0%
CTACTAAGCCGCATAAGATG+AGG - chr7.3:75695683-75695702 None:intergenic 45.0%
CTCATCTTATGCGGCTTAGT+AGG + chr7.3:75695681-75695700 MS.gene062461:intron 45.0%
GGTTCCACCATTAGACTTCA+AGG - chr7.3:75696941-75696960 None:intergenic 45.0%
GTCTCCTTGAAGTCTAATGG+TGG + chr7.3:75696934-75696953 MS.gene062461:CDS 45.0%
GTCTGAACTCTTAACCCTCA+GGG - chr7.3:75697637-75697656 None:intergenic 45.0%
TAAGCCGCATAAGATGAGGA+GGG - chr7.3:75695679-75695698 None:intergenic 45.0%
TACTCGGACCCAAAAGAGTT+AGG - chr7.3:75697057-75697076 None:intergenic 45.0%
TAGACATCATTTGTCAGGGC+CGG - chr7.3:75696074-75696093 None:intergenic 45.0%
TCTGAACTCTTAACCCTCAG+GGG - chr7.3:75697636-75697655 None:intergenic 45.0%
TGTCTGAACTCTTAACCCTC+AGG - chr7.3:75697638-75697657 None:intergenic 45.0%
TGTTGTAATTGGCAAGGGTC+AGG - chr7.3:75697755-75697774 None:intergenic 45.0%
! GTTCCTAAGTTTAGGACAGC+AGG - chr7.3:75696602-75696621 None:intergenic 45.0%
!!! GGTGGTCCAACGGATTTTTT+TGG + chr7.3:75695396-75695415 MS.gene062461:intron 45.0%
AAAGGAGATAGGCGGTACCA+TGG - chr7.3:75697238-75697257 None:intergenic 50.0%
AAGGAGATAGGCGGTACCAT+GGG - chr7.3:75697237-75697256 None:intergenic 50.0%
AGGGGGATCATCTTCGTAGT+TGG - chr7.3:75697618-75697637 None:intergenic 50.0%
CAGGGCCGTTCCTATGAAAT+AGG + chr7.3:75695787-75695806 MS.gene062461:intron 50.0%
CCATGTTACTGTCCCCTTTC+AGG + chr7.3:75696784-75696803 MS.gene062461:CDS 50.0%
CCTGAAAGGGGACAGTAACA+TGG - chr7.3:75696787-75696806 None:intergenic 50.0%
CGGATTACGCTCAAGATGTC+CGG - chr7.3:75695348-75695367 None:intergenic 50.0%
CTAAGCCGCATAAGATGAGG+AGG - chr7.3:75695680-75695699 None:intergenic 50.0%
CTGAACTCTTAACCCTCAGG+GGG - chr7.3:75697635-75697654 None:intergenic 50.0%
GCGCACAACGTGAAACACAA+GGG + chr7.3:75695291-75695310 MS.gene062461:intron 50.0%
GGCCGTTCCTATGAAATAGG+AGG + chr7.3:75695790-75695809 MS.gene062461:intron 50.0%
GGGGATCATCTTCGTAGTTG+GGG - chr7.3:75697616-75697635 None:intergenic 50.0%
GGGGGATCATCTTCGTAGTT+GGG - chr7.3:75697617-75697636 None:intergenic 50.0%
GTTGTGCGCGAAGTGTATAG+CGG - chr7.3:75695280-75695299 None:intergenic 50.0%
TACGAAGATGATCCCCCTGA+GGG + chr7.3:75697620-75697639 MS.gene062461:CDS 50.0%
AAGATGTCCGGTTCACGACG+TGG - chr7.3:75695336-75695355 None:intergenic 55.0%
AGATGTCCGGTTCACGACGT+GGG - chr7.3:75695335-75695354 None:intergenic 55.0%
AGCGATTCCTACACTCCCCA+AGG + chr7.3:75696047-75696066 MS.gene062461:intron 55.0%
AGGAGATAGGCGGTACCATG+GGG - chr7.3:75697236-75697255 None:intergenic 55.0%
AGTGGTGATCTGGTAGCAGG+TGG + chr7.3:75695378-75695397 MS.gene062461:intron 55.0%
ATTTGTCAGGGCCGGACCTT+GGG - chr7.3:75696066-75696085 None:intergenic 55.0%
CGCGCACAACGTGAAACACA+AGG + chr7.3:75695290-75695309 MS.gene062461:intron 55.0%
CTACGAAGATGATCCCCCTG+AGG + chr7.3:75697619-75697638 MS.gene062461:CDS 55.0%
TCAGACGTTGCATGTGCACC+TGG - chr7.3:75697704-75697723 None:intergenic 55.0%
TCTGGTAGCAGGTGGTCCAA+CGG + chr7.3:75695386-75695405 MS.gene062461:intron 55.0%
TTCCTACACTCCCCAAGGTC+CGG + chr7.3:75696052-75696071 MS.gene062461:intron 55.0%
! GGTGGAGGGTTGACTTCTCT+TGG - chr7.3:75697779-75697798 None:intergenic 55.0%
ACCTCGTCCTCCGCCTCATT+GGG + chr7.3:75697796-75697815 MS.gene062461:CDS 60.0%
CACAACCCCACGTCGTGAAC+CGG + chr7.3:75695326-75695345 MS.gene062461:intron 60.0%
CATTTGTCAGGGCCGGACCT+TGG - chr7.3:75696067-75696086 None:intergenic 60.0%
GATGTCCGGTTCACGACGTG+GGG - chr7.3:75695334-75695353 None:intergenic 60.0%
GGAGATAGGCGGTACCATGG+GGG - chr7.3:75697235-75697254 None:intergenic 60.0%
TTTGTCAGGGCCGGACCTTG+GGG - chr7.3:75696065-75696084 None:intergenic 60.0%
CAATGAGGCGGAGGACGAGG+TGG - chr7.3:75697797-75697816 None:intergenic 65.0%
CACCTCGTCCTCCGCCTCAT+TGG + chr7.3:75697795-75697814 MS.gene062461:CDS 65.0%
CCTCGTCCTCCGCCTCATTG+GGG + chr7.3:75697797-75697816 MS.gene062461:CDS 65.0%
CCCCAATGAGGCGGAGGACG+AGG - chr7.3:75697800-75697819 None:intergenic 70.0%
GAGGCGGAGGACGAGGTGGA+GGG - chr7.3:75697793-75697812 None:intergenic 70.0%
TGAGGCGGAGGACGAGGTGG+AGG - chr7.3:75697794-75697813 None:intergenic 70.0%
! GGCCGGACCTTGGGGAGTGT+AGG - chr7.3:75696057-75696076 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 75695053 75697824 75695053 ID=MS.gene062461
chr7.3 mRNA 75695053 75697824 75695053 ID=MS.gene062461.t1;Parent=MS.gene062461
chr7.3 exon 75695053 75695133 75695053 ID=MS.gene062461.t1.exon1;Parent=MS.gene062461.t1
chr7.3 CDS 75695053 75695133 75695053 ID=cds.MS.gene062461.t1;Parent=MS.gene062461.t1
chr7.3 exon 75696571 75697239 75696571 ID=MS.gene062461.t1.exon2;Parent=MS.gene062461.t1
chr7.3 CDS 75696571 75697239 75696571 ID=cds.MS.gene062461.t1;Parent=MS.gene062461.t1
chr7.3 exon 75697594 75697824 75697594 ID=MS.gene062461.t1.exon3;Parent=MS.gene062461.t1
chr7.3 CDS 75697594 75697824 75697594 ID=cds.MS.gene062461.t1;Parent=MS.gene062461.t1
Gene Sequence

>MS.gene062461

ATGGAGCCTCTGACGATTTCAAACTCTAAATTGCTTGATTGCTGCAATTGTTTTCAACCTCTAAGTATTCCTGTCTTTCAGGTATGCATTTGATTATATTAATTGTTTTCTACTAATGAGAAAATTTAATTTCTTGTCATATATATGCAATATGTTTCTGGTCATTTATTTTAAATATTTAATACTCTTTTCTAGTATGTTTCAAACATTGTATTCAATAGTGTCCGCTATACACTTCGCGCACAACGTGAAACACAAGGGTATGACTCTTAACACAACCCCACGTCGTGAACCGGACATCTTGAGCGTAATCCGATTGGCTAATAGTGGTGATCTGGTAGCAGGTGGTCCAACGGATTTTTTTGGATAGATTCTGATAATATCTTAGGATTTGTGTTGAACCTAACTCAACTTTACAAAACTGACTTGTAAGGTGAGGAATGCCCCCAATTATATACTCATATTTAGGCTTTATTTCATTTAATGCAATTAACATAGAATTCACTTTAGTGGGTAAAGTAAGTATTAATTAGAAAATGCATGATGGATATTGAAGGTACATCATTACAATCAAGAGTTTTTAAATTAGCGACACTTGATTTTCTCAATTTAAAGGAGATTTTCCCTCCTCATCTTATGCGGCTTAGTAGGAAACAGAAAAGAATGGAGAACCAAGATGTCCCTATAGAGACAAAACAATTAGGGAGAAACAGAGATAGATGCATAACAAATGACAGGGCCGTTCCTATGAAATAGGAGGCTCGGTTCTATTTTTAAAATAGGCCCCAGTAAAATCAAAACGCAATTCTTTTTGTGTAGCTAAGCTTCATTAAAAAATCAGAATCAGAAGAACTTTTATACACGAAACAAAACAAAATAAAATTAAGTGAAAGAGAGGTGAAATTTACCTAACAAAATAAAATAGTTTCTTTCAATGGGGGGTGAGTATTATAATTTTTTTTAAGGCCCATAGTTTTTAGAGGTTCGGTTCGGTAGCGATTCCTACACTCCCCAAGGTCCGGCCCTGACAAATGATGTCTAGTAGTGAAGAGCATGATCATGAATTGATACTATTTTACAAATCACTTTTATTTATTTTAATTGCTTAGATGTGTTTTTTAAGCCTTAGAGGCAAAGACTTGTTTGATTTACATTGGGTTTGAATATAAGTTACAATGATCTCTCATAAATAATGATGAATGTCTTTAATTTTGTATATCCTTCTATTTTTGAGCTTTTATATGTGTATGTTATGAACCTGTATTGTTTCTCTAAACTTTGGTATTGTGGCCATATTGCTACCTGCTATACTGCTATAGTATTTTGGGTGTCAGCTGTAATCCGTCTTTGAGTACATTGATTTTGAGAATAATAAATTAAGAATGATTAGCTTTATGTTTATTATACTTATGATTGCATAACTTGATAACAAGCTTTACAAAAAATCTCTTACTTTATTTGATTCTAGCAAATGGTTCAAAGTTTAATTTGACGGTTTTCTTTTTTGTTGTAATTCAGTGTGATAATGGTCATATTGTTTGCTCTACCTGCTGTCCTAAACTTAGGAACAAGTGTCAGAAGTGCTCGTTGCACATTAGCTCAAAACGTTGTAAAGCTATCGAGAATCTATTGCAATCTATTGAAATGCCATGTCCAAATGCAAAACATGGTTGCAGGGAGAAAATGAGTTACACTGGAAATAGGAAGCATGAAGAAGAATGCATCTATGTGCCATGTTACTGTCCCCTTTCAGGTTGTGACTTTGTTGCAGCATCAGAACTGTTGTCCAACCATTTCAGCCATAAACATGGGGGTTCTCAAATCAAATTTTCTTATGGTCTTTGTTCAAAAAAAAAAATTTCTTATGGTCACTCCTTCATTGTCTCCTTGAAGTCTAATGGTGGAACCATTGTTCTTCAAGAGGAAAATGACGGCAAACTATTTATTCTCAATAATGCTACTATGAATTTGGGAAATGCAGTCAATATTTGCTGCATTGGTCCTAACTCTTTTGGGTCCGAGTATAGTTATGATATATTGGCTAAGTCTGAGATATGCAAACTGAAATTACAGTCTTTTGCGAAGAACGTCCAACAGTTTACTTTAGCAACTCTTTCATCAGAGTTCCTTGTGATTCCATTTCGTTCTTCTGAACCTCTCAAGCTAGAAATTTGCATAACCCCCATGGTACCGCCTATCTCCTTTTCTTTGCTTTTTTTTTTTTCGTTCCAATTAAAGTCTTATTATTTTCTTTTATGTTTTGAATTTATACTCTAGCATTTTATCTCAAATTCATCGGTTTTGCAAATGCCAAAATAAAGTTGTTTTGTTAGTGTTTTCTATTTTTGTATTTTTGTATCAGTTCTTAAAATATCAGTCTCAAAATTTCTTAAATTGATTTTGATCATGAATTTCTTTTGCCCTGTTGTACTGTAATAAATTTTGCTTTCTTTATGATGCTTTTATCATTGATCAATGTGTTGTTAATTGCGGTGCATATGCAAATATTCTTTTATTGATTTAATGGCAATGGTGCTACAGATGCAAATCTACATAATCACCCCAACTACGAAGATGATCCCCCTGAGGGTTAAGAGTTCAGACACAGTAGCCAATGTGAAGGAGATGATTTTTGACAAGACACAGTACCAGGTGCACATGCAACGTCTGATCTTTGATGGTAAGCTACTAGATGACAGCCTGACCCTTGCCAATTACAACATCCAAGAGAAGTCAACCCTCCACCTCGTCCTCCGCCTCATTGGGGACTAG

Protein sequence

>MS.gene062461.t1

MEPLTISNSKLLDCCNCFQPLSIPVFQCDNGHIVCSTCCPKLRNKCQKCSLHISSKRCKAIENLLQSIEMPCPNAKHGCREKMSYTGNRKHEEECIYVPCYCPLSGCDFVAASELLSNHFSHKHGGSQIKFSYGLCSKKKISYGHSFIVSLKSNGGTIVLQEENDGKLFILNNATMNLGNAVNICCIGPNSFGSEYSYDILAKSEICKLKLQSFAKNVQQFTLATLSSEFLVIPFRSSEPLKLEICITPMMQIYIITPTTKMIPLRVKSSDTVANVKEMIFDKTQYQVHMQRLIFDGKLLDDSLTLANYNIQEKSTLHLVLRLIGD