Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032536.t1 | XP_003621859.2 | 81.4 | 258 | 37 | 2 | 1 | 257 | 96 | 343 | 6.30E-112 | 413.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032536.t1 | Q84K34 | 31.7 | 180 | 109 | 3 | 3 | 178 | 171 | 340 | 1.5e-16 | 88.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032536.t1 | G7KWT8 | 81.4 | 258 | 37 | 2 | 1 | 257 | 70 | 317 | 4.5e-112 | 413.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032536.t1 | MTR_7g024290 | 81.395 | 258 | 37 | 2 | 1 | 257 | 70 | 317 | 6.75e-149 | 418 |
MS.gene032536.t1 | MTR_5g076810 | 73.541 | 257 | 57 | 2 | 1 | 256 | 23 | 269 | 2.22e-130 | 370 |
MS.gene032536.t1 | MTR_1g046640 | 74.016 | 254 | 55 | 2 | 4 | 257 | 73 | 315 | 1.10e-129 | 370 |
MS.gene032536.t1 | MTR_5g067400 | 72.266 | 256 | 61 | 1 | 1 | 256 | 70 | 315 | 1.42e-128 | 367 |
MS.gene032536.t1 | MTR_1g046650 | 69.650 | 257 | 67 | 2 | 1 | 257 | 1 | 246 | 1.86e-125 | 356 |
MS.gene032536.t1 | MTR_1g046650 | 69.650 | 257 | 67 | 2 | 1 | 257 | 70 | 315 | 4.43e-124 | 355 |
MS.gene032536.t1 | MTR_1g046650 | 69.650 | 257 | 67 | 2 | 1 | 257 | 70 | 315 | 8.25e-124 | 355 |
MS.gene032536.t1 | MTR_1g046650 | 69.650 | 257 | 67 | 2 | 1 | 257 | 101 | 346 | 3.35e-123 | 354 |
MS.gene032536.t1 | MTR_7g094390 | 69.261 | 257 | 69 | 1 | 1 | 257 | 231 | 477 | 7.58e-120 | 350 |
MS.gene032536.t1 | MTR_5g076370 | 64.981 | 257 | 77 | 2 | 1 | 254 | 93 | 339 | 3.89e-111 | 323 |
MS.gene032536.t1 | MTR_5g061290 | 62.595 | 262 | 83 | 2 | 1 | 257 | 76 | 327 | 2.62e-109 | 318 |
MS.gene032536.t1 | MTR_5g076720 | 64.231 | 260 | 80 | 2 | 1 | 257 | 141 | 390 | 4.50e-109 | 320 |
MS.gene032536.t1 | MTR_2g038430 | 60.370 | 270 | 84 | 3 | 1 | 257 | 84 | 343 | 3.30e-107 | 313 |
MS.gene032536.t1 | MTR_5g076505 | 62.692 | 260 | 84 | 2 | 1 | 257 | 66 | 315 | 4.18e-107 | 312 |
MS.gene032536.t1 | MTR_5g076660 | 64.591 | 257 | 78 | 2 | 1 | 254 | 92 | 338 | 8.80e-106 | 310 |
MS.gene032536.t1 | MTR_2g038420 | 62.214 | 262 | 84 | 3 | 1 | 257 | 84 | 335 | 9.40e-106 | 310 |
MS.gene032536.t1 | MTR_5g076820 | 70.270 | 222 | 52 | 3 | 1 | 218 | 77 | 288 | 4.20e-102 | 299 |
MS.gene032536.t1 | MTR_5g076520 | 62.357 | 263 | 83 | 4 | 1 | 257 | 70 | 322 | 4.61e-100 | 295 |
MS.gene032536.t1 | MTR_5g077020 | 71.667 | 180 | 35 | 4 | 5 | 182 | 45 | 210 | 2.56e-80 | 241 |
MS.gene032536.t1 | MTR_5g076540 | 66.272 | 169 | 47 | 1 | 1 | 169 | 70 | 228 | 3.33e-71 | 219 |
MS.gene032536.t1 | MTR_4g058025 | 71.429 | 133 | 27 | 2 | 4 | 135 | 6 | 128 | 1.00e-55 | 177 |
MS.gene032536.t1 | MTR_4g094468 | 43.558 | 163 | 81 | 3 | 3 | 165 | 158 | 309 | 1.58e-35 | 129 |
MS.gene032536.t1 | MTR_5g061310 | 68.831 | 77 | 24 | 0 | 181 | 257 | 1 | 77 | 1.65e-29 | 106 |
MS.gene032536.t1 | MTR_4g009980 | 59.375 | 64 | 26 | 0 | 194 | 257 | 8 | 71 | 4.71e-19 | 79.3 |
MS.gene032536.t1 | MTR_7g116360 | 52.128 | 94 | 45 | 0 | 163 | 256 | 30 | 123 | 6.81e-19 | 84.0 |
MS.gene032536.t1 | MTR_7g116360 | 58.667 | 75 | 31 | 0 | 182 | 256 | 125 | 199 | 1.80e-17 | 80.1 |
MS.gene032536.t1 | MTR_7g116360 | 58.667 | 75 | 31 | 0 | 182 | 256 | 201 | 275 | 1.80e-17 | 80.1 |
MS.gene032536.t1 | MTR_7g105080 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 7.02e-19 | 80.5 |
MS.gene032536.t1 | MTR_3g092130 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 7.02e-19 | 80.5 |
MS.gene032536.t1 | MTR_1g059690 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 7.02e-19 | 80.5 |
MS.gene032536.t1 | MTR_5g092700 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.06e-18 | 80.5 |
MS.gene032536.t1 | MTR_4g073580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.06e-18 | 80.5 |
MS.gene032536.t1 | MTR_8g088060 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.07e-18 | 80.9 |
MS.gene032536.t1 | MTR_5g033960 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.20e-18 | 80.5 |
MS.gene032536.t1 | MTR_3g092130 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.60e-18 | 79.7 |
MS.gene032536.t1 | MTR_4g073580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 2.72e-18 | 80.5 |
MS.gene032536.t1 | MTR_4g088485 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 5.41e-18 | 80.5 |
MS.gene032536.t1 | MTR_4g088485 | 58.667 | 75 | 31 | 0 | 182 | 256 | 138 | 212 | 5.41e-18 | 80.5 |
MS.gene032536.t1 | MTR_1g066390 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 6.09e-18 | 80.5 |
MS.gene032536.t1 | MTR_1g066390 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 6.09e-18 | 80.5 |
MS.gene032536.t1 | MTR_1g066390 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 6.09e-18 | 80.5 |
MS.gene032536.t1 | MTR_7g116360 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 7.11e-18 | 80.5 |
MS.gene032536.t1 | MTR_7g116360 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 7.11e-18 | 80.5 |
MS.gene032536.t1 | MTR_7g116360 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 7.11e-18 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.48e-17 | 80.1 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 1.48e-17 | 80.1 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 1.48e-17 | 80.1 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.96e-17 | 80.1 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 1.96e-17 | 80.1 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 1.96e-17 | 80.1 |
MS.gene032536.t1 | MTR_6g061930 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.96e-17 | 80.1 |
MS.gene032536.t1 | MTR_6g061930 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 1.96e-17 | 80.1 |
MS.gene032536.t1 | MTR_6g061930 | 58.667 | 75 | 31 | 0 | 182 | 256 | 214 | 288 | 1.96e-17 | 80.1 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 2.05e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 2.05e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 2.05e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 2.05e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 3.11e-17 | 81.3 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 3.11e-17 | 81.3 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 3.11e-17 | 81.3 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 3.11e-17 | 81.3 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 381 | 455 | 3.11e-17 | 81.3 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 457 | 531 | 3.11e-17 | 81.3 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 533 | 607 | 3.11e-17 | 81.3 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 609 | 683 | 3.11e-17 | 81.3 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 685 | 759 | 3.11e-17 | 81.3 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 761 | 835 | 3.11e-17 | 81.3 |
MS.gene032536.t1 | MTR_4g088495 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 3.65e-17 | 81.3 |
MS.gene032536.t1 | MTR_8g081020 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 3.27e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g081020 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 3.27e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g081020 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 3.27e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g081020 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 3.27e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g081020 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 3.27e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g080920 | 57.333 | 75 | 32 | 0 | 182 | 256 | 77 | 151 | 3.71e-17 | 78.6 |
MS.gene032536.t1 | MTR_4g080920 | 57.333 | 75 | 32 | 0 | 182 | 256 | 1 | 75 | 6.69e-17 | 77.8 |
MS.gene032536.t1 | MTR_4g080920 | 49.333 | 75 | 38 | 0 | 182 | 256 | 153 | 227 | 1.59e-13 | 68.6 |
MS.gene032536.t1 | MTR_4g080797 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 3.74e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g080797 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 3.74e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g080797 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 3.74e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g080797 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 3.74e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g080797 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 3.74e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 3.74e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 3.74e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 3.74e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 3.74e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 3.74e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 3.78e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 3.78e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 3.78e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 3.78e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 57.333 | 75 | 32 | 0 | 182 | 256 | 229 | 303 | 1.22e-16 | 79.0 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 3.82e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 3.82e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 3.82e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 3.82e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 3.82e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 381 | 455 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 381 | 455 | 5.24e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 5.52e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 5.52e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 5.52e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 5.52e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 5.52e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 381 | 455 | 5.52e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g018230 | 58.667 | 75 | 31 | 0 | 182 | 256 | 457 | 531 | 5.52e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 57.333 | 75 | 32 | 0 | 182 | 256 | 305 | 379 | 5.62e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 5.73e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 5.73e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 5.73e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 5.73e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 381 | 455 | 5.73e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 182 | 256 | 457 | 531 | 5.73e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 5.67e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 5.67e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 5.67e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 5.67e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 5.67e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 381 | 455 | 5.67e-17 | 80.5 |
MS.gene032536.t1 | MTR_4g081010 | 58.667 | 75 | 31 | 0 | 182 | 256 | 457 | 531 | 5.67e-17 | 80.5 |
MS.gene032536.t1 | MTR_8g479250 | 54.118 | 85 | 39 | 0 | 172 | 256 | 131 | 215 | 5.46e-16 | 76.3 |
MS.gene032536.t1 | MTR_5g076760 | 61.404 | 57 | 22 | 0 | 192 | 248 | 5 | 61 | 1.53e-15 | 70.1 |
MS.gene032536.t1 | MTR_5g076740 | 56.716 | 67 | 28 | 1 | 182 | 247 | 86 | 152 | 1.50e-13 | 67.0 |
MS.gene032536.t1 | MTR_5g076350 | 49.351 | 77 | 38 | 1 | 182 | 257 | 8 | 84 | 2.38e-13 | 64.3 |
MS.gene032536.t1 | MTR_5g076780 | 53.226 | 62 | 29 | 0 | 193 | 254 | 1 | 62 | 1.51e-12 | 61.6 |
MS.gene032536.t1 | MTR_5g076340 | 48.718 | 78 | 38 | 2 | 182 | 257 | 9 | 86 | 4.19e-12 | 61.2 |
MS.gene032536.t1 | MTR_7g085590 | 24.324 | 185 | 126 | 2 | 1 | 181 | 111 | 285 | 4.94e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032536.t1 | AT5G37930 | 31.667 | 180 | 109 | 3 | 3 | 178 | 171 | 340 | 2.97e-19 | 85.9 |
MS.gene032536.t1 | AT2G47110 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 6.75e-19 | 81.3 |
MS.gene032536.t1 | AT2G47110 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 6.75e-19 | 81.3 |
MS.gene032536.t1 | AT3G62250 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 8.49e-19 | 81.3 |
MS.gene032536.t1 | AT1G23410 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 8.73e-19 | 80.9 |
MS.gene032536.t1 | AT3G52590 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.03e-18 | 80.1 |
MS.gene032536.t1 | AT2G36170 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.03e-18 | 80.1 |
MS.gene032536.t1 | AT2G35635 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.28e-18 | 80.5 |
MS.gene032536.t1 | AT1G31340 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.37e-18 | 80.5 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.47e-18 | 80.5 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 1.47e-18 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.47e-18 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 1.47e-18 | 80.5 |
MS.gene032536.t1 | AT5G37640 | 55.294 | 85 | 38 | 0 | 172 | 256 | 69 | 153 | 5.62e-18 | 82.0 |
MS.gene032536.t1 | AT5G37640 | 58.667 | 75 | 31 | 0 | 182 | 256 | 155 | 229 | 8.59e-17 | 79.0 |
MS.gene032536.t1 | AT5G37640 | 57.895 | 76 | 31 | 1 | 182 | 256 | 231 | 306 | 2.28e-16 | 77.8 |
MS.gene032536.t1 | AT5G37640 | 54.667 | 75 | 34 | 0 | 182 | 256 | 3 | 77 | 3.51e-14 | 71.2 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G05050 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 7.45e-18 | 80.5 |
MS.gene032536.t1 | AT1G65350 | 58.667 | 75 | 31 | 0 | 182 | 256 | 152 | 226 | 1.59e-17 | 80.9 |
MS.gene032536.t1 | AT1G65350 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 2.23e-17 | 80.5 |
MS.gene032536.t1 | AT1G65350 | 57.333 | 75 | 31 | 1 | 182 | 256 | 77 | 150 | 1.11e-14 | 72.8 |
MS.gene032536.t1 | AT1G65350 | 47.191 | 89 | 33 | 2 | 182 | 256 | 228 | 316 | 4.20e-11 | 62.4 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G03240 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G20620 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G20620 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G20620 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT5G20620 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 1.89e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT4G02890 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 2.14e-17 | 80.5 |
MS.gene032536.t1 | AT1G55060 | 57.333 | 75 | 32 | 0 | 182 | 256 | 77 | 151 | 2.52e-17 | 79.0 |
MS.gene032536.t1 | AT1G55060 | 57.333 | 75 | 32 | 0 | 182 | 256 | 153 | 227 | 6.23e-17 | 77.8 |
MS.gene032536.t1 | AT1G55060 | 52.000 | 75 | 36 | 0 | 182 | 256 | 1 | 75 | 1.32e-13 | 68.6 |
MS.gene032536.t1 | AT5G20620 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 3.44e-17 | 80.5 |
MS.gene032536.t1 | AT5G20620 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 3.44e-17 | 80.5 |
MS.gene032536.t1 | AT5G20620 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 3.44e-17 | 80.5 |
MS.gene032536.t1 | AT5G20620 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 3.44e-17 | 80.5 |
MS.gene032536.t1 | AT5G20620 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 3.44e-17 | 80.5 |
MS.gene032536.t1 | AT3G09790 | 60.000 | 75 | 30 | 0 | 182 | 256 | 79 | 153 | 3.73e-17 | 80.9 |
MS.gene032536.t1 | AT3G09790 | 56.000 | 75 | 33 | 0 | 182 | 256 | 3 | 77 | 1.63e-15 | 76.3 |
MS.gene032536.t1 | AT3G09790 | 56.164 | 73 | 30 | 1 | 182 | 252 | 319 | 391 | 8.76e-14 | 71.2 |
MS.gene032536.t1 | AT3G09790 | 54.795 | 73 | 33 | 0 | 182 | 254 | 552 | 624 | 2.54e-13 | 69.7 |
MS.gene032536.t1 | AT3G09790 | 60.000 | 75 | 30 | 0 | 182 | 256 | 79 | 153 | 3.73e-17 | 80.9 |
MS.gene032536.t1 | AT3G09790 | 56.000 | 75 | 33 | 0 | 182 | 256 | 3 | 77 | 1.63e-15 | 76.3 |
MS.gene032536.t1 | AT3G09790 | 56.164 | 73 | 30 | 1 | 182 | 252 | 319 | 391 | 8.76e-14 | 71.2 |
MS.gene032536.t1 | AT3G09790 | 54.795 | 73 | 33 | 0 | 182 | 254 | 552 | 624 | 2.54e-13 | 69.7 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 3.92e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 381 | 455 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 1 | 75 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 77 | 151 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 153 | 227 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 229 | 303 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 305 | 379 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT4G05320 | 58.667 | 75 | 31 | 0 | 182 | 256 | 381 | 455 | 5.49e-17 | 80.5 |
MS.gene032536.t1 | AT1G66660 | 29.032 | 186 | 118 | 7 | 1 | 179 | 38 | 216 | 7.66e-15 | 72.0 |
MS.gene032536.t1 | AT1G53930 | 51.351 | 74 | 36 | 0 | 181 | 254 | 85 | 158 | 4.49e-14 | 68.6 |
MS.gene032536.t1 | AT1G66660 | 29.032 | 186 | 118 | 6 | 1 | 179 | 162 | 340 | 1.71e-13 | 69.7 |
MS.gene032536.t1 | AT1G66630 | 26.904 | 197 | 116 | 5 | 3 | 178 | 107 | 296 | 7.13e-13 | 67.4 |
MS.gene032536.t1 | AT1G66620 | 27.717 | 184 | 114 | 5 | 3 | 178 | 102 | 274 | 2.37e-12 | 66.2 |
MS.gene032536.t1 | AT1G66610 | 27.439 | 164 | 102 | 5 | 7 | 165 | 183 | 334 | 7.91e-12 | 64.7 |
Find 59 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATAATGCTACTATGAATT+TGG | 0.079505 | 7.2:+75287695 | MS.gene032536:CDS |
TGCATTGGTCCTAACTCTTC+TGG | 0.129441 | 7.2:+75287738 | MS.gene032536:CDS |
CCATGTTACTGTCCCCTTTC+AGG | 0.141370 | 7.2:+75287477 | MS.gene032536:CDS |
CTTCTCTTGGATGTTGTAAT+TGG | 0.203344 | 7.2:-75288452 | None:intergenic |
CACCACGTCCTCCGCCTCAT+TGG | 0.252754 | 7.2:+75288484 | MS.gene032536:CDS |
ACCACGTCCTCCGCCTCATT+GGG | 0.289031 | 7.2:+75288485 | MS.gene032536:CDS |
AAATGAGTTACACTGGAAAT+AGG | 0.344851 | 7.2:+75287427 | MS.gene032536:CDS |
CGAGTATAGTTATGATATAT+TGG | 0.382189 | 7.2:+75287764 | MS.gene032536:CDS |
AATAATGCTACTATGAATTT+GGG | 0.385162 | 7.2:+75287696 | MS.gene032536:CDS |
ATTGTCTCCTTGAAGTCTAA+TGG | 0.388929 | 7.2:+75287624 | MS.gene032536:CDS |
CGAATGCAAAACATGGTTGC+AGG | 0.390717 | 7.2:+75287400 | MS.gene032536:CDS |
GCATTGGTCCTAACTCTTCT+GGG | 0.401380 | 7.2:+75287739 | MS.gene032536:CDS |
CCCCATGTTTATGGCTGAAA+TGG | 0.405710 | 7.2:-75287536 | None:intergenic |
ATGCAACGTCTGATCTTTGA+TGG | 0.409178 | 7.2:+75288400 | MS.gene032536:CDS |
TGAGGCGGAGGACGTGGTGG+AGG | 0.424350 | 7.2:-75288480 | None:intergenic |
GCAGTCAATATTTGCTGCAT+TGG | 0.437797 | 7.2:+75287723 | MS.gene032536:CDS |
CCCCAATGAGGCGGAGGACG+TGG | 0.440136 | 7.2:-75288486 | None:intergenic |
GGTGGAGGGTTGACTTCTCT+TGG | 0.444956 | 7.2:-75288465 | None:intergenic |
GGTTCCACCATTAGACTTCA+AGG | 0.451128 | 7.2:-75287631 | None:intergenic |
AGAGGTTCAGAAGAACGAAA+TGG | 0.462744 | 7.2:-75287882 | None:intergenic |
AACAAAGTCACAACCTGAAA+GGG | 0.463127 | 7.2:-75287490 | None:intergenic |
CTTGGATGTTGTAATTGGCA+AGG | 0.467473 | 7.2:-75288447 | None:intergenic |
TGTCTGAACTCTTAACCCTC+AGG | 0.482923 | 7.2:-75288324 | None:intergenic |
TACTCGGACCCAGAAGAGTT+AGG | 0.488196 | 7.2:-75287747 | None:intergenic |
TGTTGTAATTGGCAAGGGTC+AGG | 0.504632 | 7.2:-75288441 | None:intergenic |
CAATATATCATAACTATACT+CGG | 0.508438 | 7.2:-75287763 | None:intergenic |
ATGCAAATTTCTAGCTTGAG+AGG | 0.533709 | 7.2:-75287900 | None:intergenic |
GTCTGAACTCTTAACCCTCA+GGG | 0.537566 | 7.2:-75288323 | None:intergenic |
CAACAAAGTCACAACCTGAA+AGG | 0.543438 | 7.2:-75287491 | None:intergenic |
GAGGCGGAGGACGTGGTGGA+GGG | 0.544624 | 7.2:-75288479 | None:intergenic |
TTGGATGTTGTAATTGGCAA+GGG | 0.555821 | 7.2:-75288446 | None:intergenic |
AACCATTTCAGCCATAAACA+TGG | 0.557081 | 7.2:+75287534 | MS.gene032536:CDS |
TCAGACGTTGCATGTGCACC+TGG | 0.565223 | 7.2:-75288390 | None:intergenic |
ACCATTTCAGCCATAAACAT+GGG | 0.588005 | 7.2:+75287535 | MS.gene032536:CDS |
ATGTTTATGGCTGAAATGGT+TGG | 0.588725 | 7.2:-75287532 | None:intergenic |
TCTAGTCCCCAATGAGGCGG+AGG | 0.594709 | 7.2:-75288492 | None:intergenic |
TGGAACCATTGTTCTTCAAG+AGG | 0.598400 | 7.2:+75287647 | MS.gene032536:CDS |
CCTGAAAGGGGACAGTAACA+TGG | 0.599066 | 7.2:-75287477 | None:intergenic |
CAATGAGGCGGAGGACGTGG+TGG | 0.606909 | 7.2:-75288483 | None:intergenic |
GGGGATCATCTTCGTAGTTG+GGG | 0.607602 | 7.2:-75288302 | None:intergenic |
AGACTTCAAGGAGACAATGA+AGG | 0.608582 | 7.2:-75287619 | None:intergenic |
CCACGTCCTCCGCCTCATTG+GGG | 0.611091 | 7.2:+75288486 | MS.gene032536:CDS |
GAGTTGCTAAAGTAAACTGT+TGG | 0.616702 | 7.2:-75287836 | None:intergenic |
GTTCTTCAAGAGGAAAATGA+CGG | 0.617899 | 7.2:+75287657 | MS.gene032536:CDS |
CCATTTCAGCCATAAACATG+GGG | 0.621391 | 7.2:+75287536 | MS.gene032536:CDS |
GTCTCCTTGAAGTCTAATGG+TGG | 0.621511 | 7.2:+75287627 | MS.gene032536:CDS |
GAATGCAAAACATGGTTGCA+GGG | 0.629567 | 7.2:+75287401 | MS.gene032536:CDS |
TGGTTGGATAACAGTTCTGA+TGG | 0.630108 | 7.2:-75287516 | None:intergenic |
AGGGAGAAAATGAGTTACAC+TGG | 0.636460 | 7.2:+75287420 | MS.gene032536:CDS |
CCATGTCCGAATGCAAAACA+TGG | 0.639006 | 7.2:+75287393 | MS.gene032536:CDS |
ACAAAGTCACAACCTGAAAG+GGG | 0.645303 | 7.2:-75287489 | None:intergenic |
CTGAACTCTTAACCCTCAGG+GGG | 0.662405 | 7.2:-75288321 | None:intergenic |
AGACACAGTAGCCAATGTGA+AGG | 0.670298 | 7.2:+75288342 | MS.gene032536:CDS |
TCTGAACTCTTAACCCTCAG+GGG | 0.679402 | 7.2:-75288322 | None:intergenic |
TCATCTAGTCCCCAATGAGG+CGG | 0.679966 | 7.2:-75288495 | None:intergenic |
AAGAACGAAATGGAATCACA+AGG | 0.699518 | 7.2:-75287872 | None:intergenic |
TGGTCATCTAGTCCCCAATG+AGG | 0.703849 | 7.2:-75288498 | None:intergenic |
GGAGATAGGCGGTACCATGG+GGG | 0.718009 | 7.2:-75287925 | None:intergenic |
CATTTCAGCCATAAACATGG+GGG | 0.731821 | 7.2:+75287537 | MS.gene032536:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAAAAAAAAAAATTTCTTA+TGG | + | chr7.2:75287591-75287610 | MS.gene032536:CDS | 10.0% |
!!! | ATATTCTTTTATTGATTTAA+TGG | + | chr7.2:75288246-75288265 | MS.gene032536:intron | 10.0% |
!! | GAAAATAATAAGACTTTAAT+TGG | - | chr7.2:75287973-75287992 | None:intergenic | 15.0% |
!! | AAAATTTATTACAGTACAAC+AGG | - | chr7.2:75288166-75288185 | None:intergenic | 20.0% |
!! | AAATTTATTACAGTACAACA+GGG | - | chr7.2:75288165-75288184 | None:intergenic | 20.0% |
!! | AATAATGCTACTATGAATTT+GGG | + | chr7.2:75287696-75287715 | MS.gene032536:CDS | 20.0% |
!! | CAATATATCATAACTATACT+CGG | - | chr7.2:75287766-75287785 | None:intergenic | 20.0% |
!!! | CTAACAAAACAACTTTATTT+TGG | - | chr7.2:75288055-75288074 | None:intergenic | 20.0% |
!!! | TCTCAAATCAAATTTTCTTA+TGG | + | chr7.2:75287561-75287580 | MS.gene032536:CDS | 20.0% |
!!! | TTTTATTGATTTAATGGCAA+TGG | + | chr7.2:75288252-75288271 | MS.gene032536:intron | 20.0% |
! | ACGAAAAAAAAGCAAAGAAA+AGG | - | chr7.2:75287949-75287968 | None:intergenic | 25.0% |
! | CAATAATGCTACTATGAATT+TGG | + | chr7.2:75287695-75287714 | MS.gene032536:CDS | 25.0% |
! | CGAGTATAGTTATGATATAT+TGG | + | chr7.2:75287764-75287783 | MS.gene032536:CDS | 25.0% |
!! | GCATTTTATCTCAAATTCAT+CGG | + | chr7.2:75288018-75288037 | MS.gene032536:intron | 25.0% |
AAAAATCATCTCCTTCACAT+TGG | - | chr7.2:75288356-75288375 | None:intergenic | 30.0% | |
AAAAGCAAAGAAAAGGAGAT+AGG | - | chr7.2:75287942-75287961 | None:intergenic | 30.0% | |
AAATGAGTTACACTGGAAAT+AGG | + | chr7.2:75287427-75287446 | MS.gene032536:CDS | 30.0% | |
! | ATTTTCCTCTTGAAGAACAA+TGG | - | chr7.2:75287655-75287674 | None:intergenic | 30.0% |
! | GATCAATGTGTTGTTAATTG+CGG | + | chr7.2:75288212-75288231 | MS.gene032536:intron | 30.0% |
AACAAAGTCACAACCTGAAA+GGG | - | chr7.2:75287493-75287512 | None:intergenic | 35.0% | |
AACCATTTCAGCCATAAACA+TGG | + | chr7.2:75287534-75287553 | MS.gene032536:CDS | 35.0% | |
AAGAACGAAATGGAATCACA+AGG | - | chr7.2:75287875-75287894 | None:intergenic | 35.0% | |
ACCATTTCAGCCATAAACAT+GGG | + | chr7.2:75287535-75287554 | MS.gene032536:CDS | 35.0% | |
ATGTTTATGGCTGAAATGGT+TGG | - | chr7.2:75287535-75287554 | None:intergenic | 35.0% | |
ATTGTCTCCTTGAAGTCTAA+TGG | + | chr7.2:75287624-75287643 | MS.gene032536:CDS | 35.0% | |
CTTCTCTTGGATGTTGTAAT+TGG | - | chr7.2:75288455-75288474 | None:intergenic | 35.0% | |
GAGTTGCTAAAGTAAACTGT+TGG | - | chr7.2:75287839-75287858 | None:intergenic | 35.0% | |
GTTCTTCAAGAGGAAAATGA+CGG | + | chr7.2:75287657-75287676 | MS.gene032536:CDS | 35.0% | |
TTGGATGTTGTAATTGGCAA+GGG | - | chr7.2:75288449-75288468 | None:intergenic | 35.0% | |
!! | ATGCAAATTTCTAGCTTGAG+AGG | - | chr7.2:75287903-75287922 | None:intergenic | 35.0% |
ACAAAGTCACAACCTGAAAG+GGG | - | chr7.2:75287492-75287511 | None:intergenic | 40.0% | |
AGAAATTTGCATAACCCCCA+TGG | + | chr7.2:75287911-75287930 | MS.gene032536:CDS | 40.0% | |
AGACTTCAAGGAGACAATGA+AGG | - | chr7.2:75287622-75287641 | None:intergenic | 40.0% | |
AGAGGTTCAGAAGAACGAAA+TGG | - | chr7.2:75287885-75287904 | None:intergenic | 40.0% | |
AGCAAAGAAAAGGAGATAGG+CGG | - | chr7.2:75287939-75287958 | None:intergenic | 40.0% | |
AGGGAGAAAATGAGTTACAC+TGG | + | chr7.2:75287420-75287439 | MS.gene032536:CDS | 40.0% | |
ATGCAACGTCTGATCTTTGA+TGG | + | chr7.2:75288400-75288419 | MS.gene032536:CDS | 40.0% | |
CAACAAAGTCACAACCTGAA+AGG | - | chr7.2:75287494-75287513 | None:intergenic | 40.0% | |
CATTTCAGCCATAAACATGG+GGG | + | chr7.2:75287537-75287556 | MS.gene032536:CDS | 40.0% | |
CCATTTCAGCCATAAACATG+GGG | + | chr7.2:75287536-75287555 | MS.gene032536:CDS | 40.0% | |
CTTGGATGTTGTAATTGGCA+AGG | - | chr7.2:75288450-75288469 | None:intergenic | 40.0% | |
GAATGCAAAACATGGTTGCA+GGG | + | chr7.2:75287401-75287420 | MS.gene032536:CDS | 40.0% | |
TGGAACCATTGTTCTTCAAG+AGG | + | chr7.2:75287647-75287666 | MS.gene032536:CDS | 40.0% | |
TTTGAGAACCCCCATGTTTA+TGG | - | chr7.2:75287548-75287567 | None:intergenic | 40.0% | |
! | CTGCAACCATGTTTTGCATT+CGG | - | chr7.2:75287402-75287421 | None:intergenic | 40.0% |
! | GCAGTCAATATTTGCTGCAT+TGG | + | chr7.2:75287723-75287742 | MS.gene032536:CDS | 40.0% |
! | TGGTTGGATAACAGTTCTGA+TGG | - | chr7.2:75287519-75287538 | None:intergenic | 40.0% |
! | TTTTGACAAGACACAGTACC+AGG | + | chr7.2:75288372-75288391 | MS.gene032536:CDS | 40.0% |
AGACACAGTAGCCAATGTGA+AGG | + | chr7.2:75288342-75288361 | MS.gene032536:CDS | 45.0% | |
CCATGTCCGAATGCAAAACA+TGG | + | chr7.2:75287393-75287412 | MS.gene032536:CDS | 45.0% | |
CCCCATGTTTATGGCTGAAA+TGG | - | chr7.2:75287539-75287558 | None:intergenic | 45.0% | |
CGAATGCAAAACATGGTTGC+AGG | + | chr7.2:75287400-75287419 | MS.gene032536:CDS | 45.0% | |
GGTTCCACCATTAGACTTCA+AGG | - | chr7.2:75287634-75287653 | None:intergenic | 45.0% | |
GTCTCCTTGAAGTCTAATGG+TGG | + | chr7.2:75287627-75287646 | MS.gene032536:CDS | 45.0% | |
GTCTGAACTCTTAACCCTCA+GGG | - | chr7.2:75288326-75288345 | None:intergenic | 45.0% | |
TCTGAACTCTTAACCCTCAG+GGG | - | chr7.2:75288325-75288344 | None:intergenic | 45.0% | |
TGTCTGAACTCTTAACCCTC+AGG | - | chr7.2:75288327-75288346 | None:intergenic | 45.0% | |
TGTTGTAATTGGCAAGGGTC+AGG | - | chr7.2:75288444-75288463 | None:intergenic | 45.0% | |
! | CCATGTTTTGCATTCGGACA+TGG | - | chr7.2:75287396-75287415 | None:intergenic | 45.0% |
! | GCATTGGTCCTAACTCTTCT+GGG | + | chr7.2:75287739-75287758 | MS.gene032536:CDS | 45.0% |
! | TGCATTGGTCCTAACTCTTC+TGG | + | chr7.2:75287738-75287757 | MS.gene032536:CDS | 45.0% |
AAAGGAGATAGGCGGTACCA+TGG | - | chr7.2:75287931-75287950 | None:intergenic | 50.0% | |
AAGGAGATAGGCGGTACCAT+GGG | - | chr7.2:75287930-75287949 | None:intergenic | 50.0% | |
AGGGGGATCATCTTCGTAGT+TGG | - | chr7.2:75288307-75288326 | None:intergenic | 50.0% | |
CCATGTTACTGTCCCCTTTC+AGG | + | chr7.2:75287477-75287496 | MS.gene032536:CDS | 50.0% | |
CCTGAAAGGGGACAGTAACA+TGG | - | chr7.2:75287480-75287499 | None:intergenic | 50.0% | |
CTGAACTCTTAACCCTCAGG+GGG | - | chr7.2:75288324-75288343 | None:intergenic | 50.0% | |
GGGGATCATCTTCGTAGTTG+GGG | - | chr7.2:75288305-75288324 | None:intergenic | 50.0% | |
GGGGGATCATCTTCGTAGTT+GGG | - | chr7.2:75288306-75288325 | None:intergenic | 50.0% | |
TACGAAGATGATCCCCCTGA+GGG | + | chr7.2:75288309-75288328 | MS.gene032536:CDS | 50.0% | |
TACTCGGACCCAGAAGAGTT+AGG | - | chr7.2:75287750-75287769 | None:intergenic | 50.0% | |
AGGAGATAGGCGGTACCATG+GGG | - | chr7.2:75287929-75287948 | None:intergenic | 55.0% | |
CTACGAAGATGATCCCCCTG+AGG | + | chr7.2:75288308-75288327 | MS.gene032536:CDS | 55.0% | |
TCAGACGTTGCATGTGCACC+TGG | - | chr7.2:75288393-75288412 | None:intergenic | 55.0% | |
! | GGTGGAGGGTTGACTTCTCT+TGG | - | chr7.2:75288468-75288487 | None:intergenic | 55.0% |
ACCACGTCCTCCGCCTCATT+GGG | + | chr7.2:75288485-75288504 | MS.gene032536:CDS | 60.0% | |
GGAGATAGGCGGTACCATGG+GGG | - | chr7.2:75287928-75287947 | None:intergenic | 60.0% | |
CAATGAGGCGGAGGACGTGG+TGG | - | chr7.2:75288486-75288505 | None:intergenic | 65.0% | |
CACCACGTCCTCCGCCTCAT+TGG | + | chr7.2:75288484-75288503 | MS.gene032536:CDS | 65.0% | |
CCACGTCCTCCGCCTCATTG+GGG | + | chr7.2:75288486-75288505 | MS.gene032536:CDS | 65.0% | |
CCCCAATGAGGCGGAGGACG+TGG | - | chr7.2:75288489-75288508 | None:intergenic | 70.0% | |
TGAGGCGGAGGACGTGGTGG+AGG | - | chr7.2:75288483-75288502 | None:intergenic | 70.0% | |
! | GAGGCGGAGGACGTGGTGGA+GGG | - | chr7.2:75288482-75288501 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 75287390 | 75288513 | 75287390 | ID=MS.gene032536 |
chr7.2 | mRNA | 75287390 | 75288513 | 75287390 | ID=MS.gene032536.t1;Parent=MS.gene032536 |
chr7.2 | exon | 75287390 | 75287932 | 75287390 | ID=MS.gene032536.t1.exon1;Parent=MS.gene032536.t1 |
chr7.2 | CDS | 75287390 | 75287932 | 75287390 | ID=cds.MS.gene032536.t1;Parent=MS.gene032536.t1 |
chr7.2 | exon | 75288283 | 75288513 | 75288283 | ID=MS.gene032536.t1.exon2;Parent=MS.gene032536.t1 |
chr7.2 | CDS | 75288283 | 75288513 | 75288283 | ID=cds.MS.gene032536.t1;Parent=MS.gene032536.t1 |
Gene Sequence |
Protein sequence |