AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41691

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41691.t1 MTR_7g024290 80.203 197 39 0 2 198 45 241 6.31e-109 318
MS.gene41691.t1 MTR_5g067400 77.665 197 44 0 2 198 45 241 4.26e-107 313
MS.gene41691.t1 MTR_5g076810 76.684 193 45 0 6 198 2 194 4.66e-103 301
MS.gene41691.t1 MTR_1g046640 76.650 197 45 1 2 198 45 240 1.26e-102 302
MS.gene41691.t1 MTR_1g046650 76.142 197 46 1 2 198 45 240 1.30e-102 302
MS.gene41691.t1 MTR_1g046650 76.142 197 46 1 2 198 45 240 3.44e-102 301
MS.gene41691.t1 MTR_1g046650 76.142 197 46 1 2 198 76 271 7.35e-102 301
MS.gene41691.t1 MTR_5g076820 76.531 196 44 1 6 199 56 251 1.57e-101 298
MS.gene41691.t1 MTR_5g076720 74.093 193 50 0 2 194 116 308 5.86e-96 288
MS.gene41691.t1 MTR_7g094390 72.589 197 54 0 3 199 207 403 1.34e-94 287
MS.gene41691.t1 MTR_5g076505 71.503 193 55 0 2 194 41 233 2.24e-94 281
MS.gene41691.t1 MTR_5g076520 72.000 200 53 1 2 198 45 244 4.69e-94 280
MS.gene41691.t1 MTR_5g061290 71.134 194 53 2 2 194 52 243 2.33e-92 276
MS.gene41691.t1 MTR_5g076370 69.347 199 58 1 3 198 69 267 1.09e-91 275
MS.gene41691.t1 MTR_5g076540 72.527 182 50 0 4 185 47 228 3.44e-88 263
MS.gene41691.t1 MTR_2g038430 66.341 205 59 1 2 196 59 263 6.99e-88 265
MS.gene41691.t1 MTR_2g038420 66.832 202 62 2 2 198 59 260 1.05e-87 265
MS.gene41691.t1 MTR_1g046650 75.000 172 42 1 27 198 1 171 1.87e-87 261
MS.gene41691.t1 MTR_5g076660 69.500 200 58 1 2 198 67 266 4.88e-87 263
MS.gene41691.t1 MTR_5g077020 76.190 168 34 3 31 196 45 208 4.22e-80 241
MS.gene41691.t1 MTR_4g058025 77.966 118 25 1 38 154 14 131 5.36e-58 184
MS.gene41691.t1 MTR_4g094468 44.845 194 102 3 2 192 131 322 1.31e-44 154
MS.gene41691.t1 MTR_3g017590 26.923 182 109 7 2 166 87 261 1.83e-12 66.6
MS.gene41691.t1 MTR_1g054335 27.429 175 117 5 2 166 92 266 2.52e-12 66.2
MS.gene41691.t1 MTR_7g085590 26.897 145 102 1 25 165 109 253 2.68e-12 66.2
MS.gene41691.t1 MTR_8g038370 27.273 176 118 5 2 167 146 321 2.79e-11 63.5
MS.gene41691.t1 MTR_7g093600 26.316 209 135 6 3 192 94 302 3.08e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41691.t1 AT5G37930 30.808 198 133 2 2 195 144 341 4.08e-25 102
MS.gene41691.t1 AT1G66620 26.866 201 138 3 2 194 75 274 8.07e-20 87.8
MS.gene41691.t1 AT1G66650 28.641 206 134 6 2 195 117 321 1.44e-16 79.0
MS.gene41691.t1 AT5G37890 30.435 184 124 4 2 181 82 265 9.58e-16 75.9
MS.gene41691.t1 AT1G66630 27.189 217 134 6 2 194 80 296 2.29e-15 75.1
MS.gene41691.t1 AT5G37870 27.363 201 139 6 2 195 76 276 2.54e-15 74.7
MS.gene41691.t1 AT5G37910 27.419 186 129 3 2 181 69 254 8.56e-15 73.2
MS.gene41691.t1 AT1G66660 25.980 204 139 5 2 194 137 339 1.86e-14 72.8
MS.gene41691.t1 AT1G66610 28.205 156 101 3 33 181 183 334 5.71e-14 71.6
MS.gene41691.t1 AT1G66660 26.042 192 130 5 14 194 25 215 1.18e-13 68.9
MS.gene41691.t1 AT5G62800 30.822 146 97 3 6 147 80 225 1.94e-13 69.7
MS.gene41691.t1 AT5G62800 30.822 146 97 3 6 147 80 225 2.68e-13 69.7

Find 70 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATAATAGTACTATGATTT+TGG 0.061669 7.2:-22571811 MS.gene41691:CDS
ATGCTCCTGCTCCAACAAAT+TGG 0.216620 7.2:-22571056 MS.gene41691:CDS
CTCAATGGCTTTACAACGTT+TGG 0.249566 7.2:+22572130 None:intergenic
AAGAACAATGCTTTCATCAT+TGG 0.283435 7.2:+22571866 None:intergenic
TGCTCCTGCTCCAACAAATT+GGG 0.298893 7.2:-22571055 MS.gene41691:CDS
CCGTGTTACTGCCCTCATTC+AGG 0.312675 7.2:-22571999 MS.gene41691:CDS
AAGTAAGTTACACTGGAAAT+AGG 0.344851 7.2:-22572049 MS.gene41691:CDS
GCTTTCATCATTGGACTTCA+AGG 0.357244 7.2:+22571875 None:intergenic
GAGTTCCTTGTGATTCCATT+TGG 0.376238 7.2:-22571639 MS.gene41691:CDS
TCTTCTAGTCCCCAATTTGT+TGG 0.380975 7.2:+22571045 None:intergenic
AGCATGAGGGTTGAATTCTC+TGG 0.381938 7.2:+22571074 None:intergenic
GTCTGCTCTTTGAGGTAGTT+CGG 0.385390 7.2:+22571008 None:intergenic
TTGCGTTTGGACATGGCATT+TGG 0.392607 7.2:+22572090 None:intergenic
CAAGTATAGTTATGATATAC+TGG 0.396922 7.2:-22571742 MS.gene41691:CDS
CCTTGTGTTTGTCGCTGAAA+TGG 0.411429 7.2:+22571940 None:intergenic
CAAAGAAAAGAAAAGGAGAT+AGG 0.411643 7.2:+22571564 None:intergenic
GGATGGTTGTCTGCTCTTTG+AGG 0.420207 7.2:+22571000 None:intergenic
GCAGTCAATATTTGCAGCAT+TGG 0.444653 7.2:-22571783 MS.gene41691:CDS
TCGCTGACGGTGGTGAATGT+AGG 0.451539 7.2:+22570975 None:intergenic
AGTCCCCAATTTGTTGGAGC+AGG 0.458904 7.2:+22571051 None:intergenic
GAGGGCAGTAACACGGCCTA+TGG 0.464502 7.2:+22572006 None:intergenic
ACCCAAGCAAAGAAAAGAAA+AGG 0.469457 7.2:+22571557 None:intergenic
TTTGACTATAAGCGACTAGA+TGG 0.480174 7.2:-22571125 MS.gene41691:intron
GTTCTTCAAGAGGAAAATGA+TGG 0.483269 7.2:-22571849 MS.gene41691:CDS
GAGATAGGAGGTACCATGGG+GGG 0.490847 7.2:+22571579 None:intergenic
CAGTATATCATAACTATACT+TGG 0.490994 7.2:+22571743 None:intergenic
AGATAGGAGGTACCATGGGG+GGG 0.499067 7.2:+22571580 None:intergenic
AAGGAGATAGGAGGTACCAT+GGG 0.500564 7.2:+22571576 None:intergenic
AGGAGATAGGAGGTACCATG+GGG 0.508618 7.2:+22571577 None:intergenic
TGTTGTAATATGCAAGGGTC+AGG 0.508908 7.2:+22571099 None:intergenic
AGAGGTTCAGAAGAACCAAA+TGG 0.514036 7.2:+22571624 None:intergenic
CGCTGACGGTGGTGAATGTA+GGG 0.519582 7.2:+22570976 None:intergenic
GCAAATATTCATAGAGACCC+TGG 0.519934 7.2:-22571255 MS.gene41691:CDS
ATGCAAATTTCTAGCTTGAG+AGG 0.524126 7.2:+22571606 None:intergenic
AAACGCAAAACATGGTTGCT+TGG 0.530049 7.2:-22572075 MS.gene41691:CDS
ACAAAGTCACAACCTGAATG+AGG 0.538706 7.2:+22571987 None:intergenic
CTGGGATGTTGTAATATGCA+AGG 0.538775 7.2:+22571093 None:intergenic
TGAAAGCATTGTTCTTCAAG+AGG 0.538905 7.2:-22571859 MS.gene41691:CDS
ATGATAAGAGTCGTCGCTGA+CGG 0.545968 7.2:+22570962 None:intergenic
GCATGAGGGTTGAATTCTCT+GGG 0.546822 7.2:+22571075 None:intergenic
GGTGGTGAATGTAGGGTGGA+TGG 0.551197 7.2:+22570983 None:intergenic
GTCTGAACTCTTAACCATCA+GGG 0.556238 7.2:+22571217 None:intergenic
TTTGTTGGAGCAGGAGCATG+AGG 0.558903 7.2:+22571060 None:intergenic
AGATAGCAATAGATTCTCAA+TGG 0.569736 7.2:+22572115 None:intergenic
ATAGTTATGATATACTGGCT+AGG 0.577213 7.2:-22571737 MS.gene41691:CDS
TTGGATAAAGTAAGTTACAC+TGG 0.579396 7.2:-22572056 MS.gene41691:CDS
GGGGAACGTCTCTCCACCCA+GGG 0.580366 7.2:+22571238 None:intergenic
GGAGATAGGAGGTACCATGG+GGG 0.581778 7.2:+22571578 None:intergenic
CCATGTCCAAACGCAAAACA+TGG 0.584175 7.2:-22572083 MS.gene41691:CDS
GCTCCTGCTCCAACAAATTG+GGG 0.588889 7.2:-22571054 MS.gene41691:CDS
CCATTTCAGCGACAAACACA+AGG 0.595424 7.2:-22571940 MS.gene41691:CDS
AAAGGAGATAGGAGGTACCA+TGG 0.597689 7.2:+22571575 None:intergenic
AGAAAAGAAAAGGAGATAGG+AGG 0.602332 7.2:+22571567 None:intergenic
CAAAGTCACAACCTGAATGA+GGG 0.606250 7.2:+22571988 None:intergenic
ATGAAGAAGAATGCATCCAT+AGG 0.607516 7.2:-22572022 MS.gene41691:CDS
GGACTTCAAGGAGACAATGA+AGG 0.612179 7.2:+22571887 None:intergenic
ATAAGAGTCGTCGCTGACGG+TGG 0.612214 7.2:+22570965 None:intergenic
GTGTTTGTCGCTGAAATGGT+TGG 0.612300 7.2:+22571944 None:intergenic
CAAATATTCATAGAGACCCT+GGG 0.612805 7.2:-22571254 MS.gene41691:CDS
TGGGATGTTGTAATATGCAA+GGG 0.614439 7.2:+22571094 None:intergenic
CCTGAATGAGGGCAGTAACA+CGG 0.631244 7.2:+22571999 None:intergenic
TCTGAACTCTTAACCATCAG+GGG 0.638076 7.2:+22571218 None:intergenic
GAGGTAGTTCGGCGATGACG+CGG 0.645051 7.2:+22571019 None:intergenic
GAGTTGCTAAAGTAAACCGT+TGG 0.646845 7.2:+22571670 None:intergenic
GTAGTTCGGCGATGACGCGG+TGG 0.661908 7.2:+22571022 None:intergenic
TTGTTGGAGCAGGAGCATGA+GGG 0.682216 7.2:+22571061 None:intergenic
AAGAACCAAATGGAATCACA+AGG 0.686822 7.2:+22571634 None:intergenic
CTGAACTCTTAACCATCAGG+GGG 0.693799 7.2:+22571219 None:intergenic
TGACGGTGGTGAATGTAGGG+TGG 0.716220 7.2:+22570979 None:intergenic
ATATTCATAGAGACCCTGGG+TGG 0.732170 7.2:-22571251 MS.gene41691:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTTATTTTATTTTATGTT+TGG - chr7.2:22571613-22571632 MS.gene41691:CDS 10.0%
!! AATTCATGATCAAATAAATA+AGG + chr7.2:22571750-22571769 None:intergenic 15.0%
!!! AATAATAGTACTATGATTTT+GGG - chr7.2:22571314-22571333 MS.gene41691:intron 15.0%
!!! TTTATTATTGATTAATGTGT+TGG - chr7.2:22571830-22571849 MS.gene41691:CDS 15.0%
!! TAAAATAACAAGACTTCAAT+TGG + chr7.2:22571604-22571623 None:intergenic 20.0%
!!! AAAAACTAACAACCTTTTTT+TGG + chr7.2:22571686-22571705 None:intergenic 20.0%
!!! AAAAGACTGTAATTTTAGTT+TGG + chr7.2:22571423-22571442 None:intergenic 20.0%
!!! CAATAATAGTACTATGATTT+TGG - chr7.2:22571313-22571332 MS.gene41691:intron 20.0%
!!! GTTGTTAGTTTTTCTATTTT+GGG - chr7.2:22571693-22571712 MS.gene41691:CDS 20.0%
! CAAGTATAGTTATGATATAC+TGG - chr7.2:22571382-22571401 MS.gene41691:intron 25.0%
! CAGTATATCATAACTATACT+TGG + chr7.2:22571384-22571403 None:intergenic 25.0%
! TGCTGTAATAAAAATTGCAA+GGG - chr7.2:22571785-22571804 MS.gene41691:CDS 25.0%
!! ATTTTTATTACAGCACAACA+AGG + chr7.2:22571780-22571799 None:intergenic 25.0%
!! TCTCAAATCAGATTTTCTTA+TGG - chr7.2:22571209-22571228 MS.gene41691:intron 25.0%
!!! GGTTGTTAGTTTTTCTATTT+TGG - chr7.2:22571692-22571711 MS.gene41691:CDS 25.0%
!!! GTTTTTCAAATGCCAAAAAA+AGG - chr7.2:22571671-22571690 MS.gene41691:CDS 25.0%
AAGAACAATGCTTTCATCAT+TGG + chr7.2:22571261-22571280 None:intergenic 30.0%
AAGTAAGTTACACTGGAAAT+AGG - chr7.2:22571075-22571094 MS.gene41691:CDS 30.0%
AATAAAAATTGCAAGGGGTT+TGG - chr7.2:22571791-22571810 MS.gene41691:CDS 30.0%
AGATAGCAATAGATTCTCAA+TGG + chr7.2:22571012-22571031 None:intergenic 30.0%
CAAAGAAAAGAAAAGGAGAT+AGG + chr7.2:22571563-22571582 None:intergenic 30.0%
GCTGTAATAAAAATTGCAAG+GGG - chr7.2:22571786-22571805 MS.gene41691:CDS 30.0%
GTGCTGTAATAAAAATTGCA+AGG - chr7.2:22571784-22571803 MS.gene41691:CDS 30.0%
TTGGATAAAGTAAGTTACAC+TGG - chr7.2:22571068-22571087 MS.gene41691:CDS 30.0%
! ATAGTTATGATATACTGGCT+AGG - chr7.2:22571387-22571406 MS.gene41691:intron 30.0%
! GATTAATGTGTTGGCAATTA+CGG - chr7.2:22571839-22571858 MS.gene41691:CDS 30.0%
! TCCTTTTCTTTTCTTTGCTT+GGG - chr7.2:22571566-22571585 MS.gene41691:CDS 30.0%
AAGAACCAAATGGAATCACA+AGG + chr7.2:22571493-22571512 None:intergenic 35.0%
ACCCAAGCAAAGAAAAGAAA+AGG + chr7.2:22571570-22571589 None:intergenic 35.0%
AGAAAAGAAAAGGAGATAGG+AGG + chr7.2:22571560-22571579 None:intergenic 35.0%
AGACAGGATATTCAATGTGA+TGG - chr7.2:22571926-22571945 MS.gene41691:CDS 35.0%
ATAACAAGACTTCAATTGGC+AGG + chr7.2:22571600-22571619 None:intergenic 35.0%
ATGAAGAAGAATGCATCCAT+AGG - chr7.2:22571102-22571121 MS.gene41691:CDS 35.0%
CAAATATTCATAGAGACCCT+GGG - chr7.2:22571870-22571889 MS.gene41691:CDS 35.0%
GTTCTTCAAGAGGAAAATGA+TGG - chr7.2:22571275-22571294 MS.gene41691:intron 35.0%
TGGGATGTTGTAATATGCAA+GGG + chr7.2:22572033-22572052 None:intergenic 35.0%
TTTGACTATAAGCGACTAGA+TGG - chr7.2:22571999-22572018 MS.gene41691:CDS 35.0%
! CTCCTTTTCTTTTCTTTGCT+TGG - chr7.2:22571565-22571584 MS.gene41691:CDS 35.0%
!! ATGCAAATTTCTAGCTTGAG+AGG + chr7.2:22571521-22571540 None:intergenic 35.0%
!! TGAAAGCATTGTTCTTCAAG+AGG - chr7.2:22571265-22571284 MS.gene41691:intron 35.0%
AAACGCAAAACATGGTTGCT+TGG - chr7.2:22571049-22571068 MS.gene41691:CDS 40.0%
ACAAAGTCACAACCTGAATG+AGG + chr7.2:22571140-22571159 None:intergenic 40.0%
AGAGGTTCAGAAGAACCAAA+TGG + chr7.2:22571503-22571522 None:intergenic 40.0%
CAAAGTCACAACCTGAATGA+GGG + chr7.2:22571139-22571158 None:intergenic 40.0%
CTGGGATGTTGTAATATGCA+AGG + chr7.2:22572034-22572053 None:intergenic 40.0%
GAGTTCCTTGTGATTCCATT+TGG - chr7.2:22571485-22571504 MS.gene41691:intron 40.0%
GAGTTGCTAAAGTAAACCGT+TGG + chr7.2:22571457-22571476 None:intergenic 40.0%
GATGGAGAAGATTCTTGACA+AGG - chr7.2:22571944-22571963 MS.gene41691:CDS 40.0%
GCAAATATTCATAGAGACCC+TGG - chr7.2:22571869-22571888 MS.gene41691:CDS 40.0%
GCAGTCAATATTTGCAGCAT+TGG - chr7.2:22571341-22571360 MS.gene41691:intron 40.0%
GCTTTCATCATTGGACTTCA+AGG + chr7.2:22571252-22571271 None:intergenic 40.0%
GTCTGAACTCTTAACCATCA+GGG + chr7.2:22571910-22571929 None:intergenic 40.0%
TCTGAACTCTTAACCATCAG+GGG + chr7.2:22571909-22571928 None:intergenic 40.0%
TCTTCTAGTCCCCAATTTGT+TGG + chr7.2:22572082-22572101 None:intergenic 40.0%
TGATGGTTAAGAGTTCAGAC+AGG - chr7.2:22571910-22571929 MS.gene41691:CDS 40.0%
TGTCTGAACTCTTAACCATC+AGG + chr7.2:22571911-22571930 None:intergenic 40.0%
TGTTGTAATATGCAAGGGTC+AGG + chr7.2:22572028-22572047 None:intergenic 40.0%
! AAGCAACCATGTTTTGCGTT+TGG + chr7.2:22571050-22571069 None:intergenic 40.0%
! CTCAATGGCTTTACAACGTT+TGG + chr7.2:22570997-22571016 None:intergenic 40.0%
! CTTTTGCAAAGAACGTCCAA+CGG - chr7.2:22571438-22571457 MS.gene41691:intron 40.0%
AATTTGCATAAACCCCCCCA+TGG - chr7.2:22571532-22571551 MS.gene41691:intron 45.0%
AGCAGACATTGATCTTGCAC+TGG + chr7.2:22571978-22571997 None:intergenic 45.0%
AGCATGAGGGTTGAATTCTC+TGG + chr7.2:22572053-22572072 None:intergenic 45.0%
ATATTCATAGAGACCCTGGG+TGG - chr7.2:22571873-22571892 MS.gene41691:CDS 45.0%
ATGATAAGAGTCGTCGCTGA+CGG + chr7.2:22572165-22572184 None:intergenic 45.0%
ATGCTCCTGCTCCAACAAAT+TGG - chr7.2:22572068-22572087 MS.gene41691:CDS 45.0%
CCATGTCCAAACGCAAAACA+TGG - chr7.2:22571041-22571060 MS.gene41691:CDS 45.0%
CCATTTCAGCGACAAACACA+AGG - chr7.2:22571184-22571203 MS.gene41691:intron 45.0%
CCTTGTGTTTGTCGCTGAAA+TGG + chr7.2:22571187-22571206 None:intergenic 45.0%
CTGAACTCTTAACCATCAGG+GGG + chr7.2:22571908-22571927 None:intergenic 45.0%
GCAGACATTGATCTTGCACT+GGG + chr7.2:22571977-22571996 None:intergenic 45.0%
GCATGAGGGTTGAATTCTCT+GGG + chr7.2:22572052-22572071 None:intergenic 45.0%
GGACTTCAAGGAGACAATGA+AGG + chr7.2:22571240-22571259 None:intergenic 45.0%
GTGTTTGTCGCTGAAATGGT+TGG + chr7.2:22571183-22571202 None:intergenic 45.0%
TGCTCCTGCTCCAACAAATT+GGG - chr7.2:22572069-22572088 MS.gene41691:CDS 45.0%
TTGCGTTTGGACATGGCATT+TGG + chr7.2:22571037-22571056 None:intergenic 45.0%
! CCATGTTTTGCGTTTGGACA+TGG + chr7.2:22571044-22571063 None:intergenic 45.0%
!! AAAGGAGATAGGAGGTACCA+TGG + chr7.2:22571552-22571571 None:intergenic 45.0%
!! AAGGAGATAGGAGGTACCAT+GGG + chr7.2:22571551-22571570 None:intergenic 45.0%
!! GTCTGCTCTTTGAGGTAGTT+CGG + chr7.2:22572119-22572138 None:intergenic 45.0%
CCTGAATGAGGGCAGTAACA+CGG + chr7.2:22571128-22571147 None:intergenic 50.0%
GCTCCTGCTCCAACAAATTG+GGG - chr7.2:22572070-22572089 MS.gene41691:CDS 50.0%
GGATGGTTGTCTGCTCTTTG+AGG + chr7.2:22572127-22572146 None:intergenic 50.0%
! TTGTTGGAGCAGGAGCATGA+GGG + chr7.2:22572066-22572085 None:intergenic 50.0%
! TTTGTTGGAGCAGGAGCATG+AGG + chr7.2:22572067-22572086 None:intergenic 50.0%
!! AGGAGATAGGAGGTACCATG+GGG + chr7.2:22571550-22571569 None:intergenic 50.0%
!! AGTCCCCAATTTGTTGGAGC+AGG + chr7.2:22572076-22572095 None:intergenic 50.0%
ATAAGAGTCGTCGCTGACGG+TGG + chr7.2:22572162-22572181 None:intergenic 55.0%
CGCTGACGGTGGTGAATGTA+GGG + chr7.2:22572151-22572170 None:intergenic 55.0%
GGTGGTGAATGTAGGGTGGA+TGG + chr7.2:22572144-22572163 None:intergenic 55.0%
TCGCTGACGGTGGTGAATGT+AGG + chr7.2:22572152-22572171 None:intergenic 55.0%
TGACGGTGGTGAATGTAGGG+TGG + chr7.2:22572148-22572167 None:intergenic 55.0%
! CCGTGTTACTGCCCTCATTC+AGG - chr7.2:22571125-22571144 MS.gene41691:intron 55.0%
!! AGATAGGAGGTACCATGGGG+GGG + chr7.2:22571547-22571566 None:intergenic 55.0%
!! GAGATAGGAGGTACCATGGG+GGG + chr7.2:22571548-22571567 None:intergenic 55.0%
!! GGAGATAGGAGGTACCATGG+GGG + chr7.2:22571549-22571568 None:intergenic 55.0%
GAGGGCAGTAACACGGCCTA+TGG + chr7.2:22571121-22571140 None:intergenic 60.0%
GAGGTAGTTCGGCGATGACG+CGG + chr7.2:22572108-22572127 None:intergenic 60.0%
TGGAGAGACGTTCCCCCTGA+TGG - chr7.2:22571893-22571912 MS.gene41691:CDS 60.0%
GGGGAACGTCTCTCCACCCA+GGG + chr7.2:22571889-22571908 None:intergenic 65.0%
GTAGTTCGGCGATGACGCGG+TGG + chr7.2:22572105-22572124 None:intergenic 65.0%
GGGGGAACGTCTCTCCACCC+AGG + chr7.2:22571890-22571909 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 22570960 22572186 22570960 ID=MS.gene41691
chr7.2 mRNA 22570960 22572186 22570960 ID=MS.gene41691.t1;Parent=MS.gene41691
chr7.2 exon 22571559 22572186 22571559 ID=MS.gene41691.t1.exon1;Parent=MS.gene41691.t1
chr7.2 CDS 22571559 22572186 22571559 ID=cds.MS.gene41691.t1;Parent=MS.gene41691.t1
chr7.2 exon 22571232 22571279 22571232 ID=MS.gene41691.t1.exon2;Parent=MS.gene41691.t1
chr7.2 CDS 22571232 22571279 22571232 ID=cds.MS.gene41691.t1;Parent=MS.gene41691.t1
chr7.2 exon 22570960 22571135 22570960 ID=MS.gene41691.t1.exon3;Parent=MS.gene41691.t1
chr7.2 CDS 22570960 22571135 22570960 ID=cds.MS.gene41691.t1;Parent=MS.gene41691.t1
Gene Sequence

>MS.gene41691

ATGAAGTGTCACAAGTGCTCATTGTACACGAGTTCCAAACGTTGTAAAGCCATTGAGAATCTATTGCTATCTATCCAAATGCCATGTCCAAACGCAAAACATGGTTGCTTGGATAAAGTAAGTTACACTGGAAATAGGAAGCATGAAGAAGAATGCATCCATAGGCCGTGTTACTGCCCTCATTCAGGTTGTGACTTTGTTGCAACATCAAAAGTGTTGTCCAACCATTTCAGCGACAAACACAAGGATTCTCAAATCAGATTTTCTTATGGTCACTCCTTCATTGTCTCCTTGAAGTCCAATGATGAAAGCATTGTTCTTCAAGAGGAAAATGATGGCAAACTATTTATTCTCAATAATAGTACTATGATTTTGGGAAATGCAGTCAATATTTGCAGCATTGGTCTTGACTCTTCTGAGTCCAAGTATAGTTATGATATACTGGCTAGGTCTCAGACATCCAAACTAAAATTACAGTCTTTTGCAAAGAACGTCCAACGGTTTACTTTAGCAACTCTTTCATCTGAGTTCCTTGTGATTCCATTTGGTTCTTCTGAACCTCTCAAGCTAGAAATTTGCATAAACCCCCCCATGGTACCTCCTATCTCCTTTTCTTTTCTTTGCTTGGGTATTTTTTCCTGCCAATTGAAGTCTTGTTATTTTATTTTATGTTTGGAATTTATACTCTAGCATTTTATTTCAAATTCATCAGTTTTTCAAATGCCAAAAAAAGGTTGTTAGTTTTTCTATTTTGGGATCAGTTTTTGAAATATCAGTCTCAAATTTTCCTTATTTATTTGATCATGAATTTCTTTTGCCTTGTTGTGCTGTAATAAAAATTGCAAGGGGTTTGGTTTTCTTTTTGTTGCTTTTATTATTGATTAATGTGTTGGCAATTACGGTGCAGATGCAAATATTCATAGAGACCCTGGGTGGAGAGACGTTCCCCCTGATGGTTAAGAGTTCAGACAGGATATTCAATGTGATGGAGAAGATTCTTGACAAGGAACATATCCCAGTGCAAGATCAATGTCTGCTCTTTGACTATAAGCGACTAGATGGCAACCTGACCCTTGCATATTACAACATCCCAGAGAATTCAACCCTCATGCTCCTGCTCCAACAAATTGGGGACTAGAAGACCACCGCGTCATCGCCGAACTACCTCAAAGAGCAGACAACCATCCACCCTACATTCACCACCGTCAGCGACGACTCTTATCATGA
Protein sequence

>MS.gene41691.t1

MKCHKCSLYTSSKRCKAIENLLLSIQMPCPNAKHGCLDKVSYTGNRKHEEECIHRPCYCPHSGCDFVATSKVLSNHFSDKHKDSQIRFSYGHSFIVSLKSNDESIVLQEENDGKLFILNNSTMILGNAVNICSIGLDSSESKYSYDILARSQTSKLKLQSFAKNVQRFTLATLSSEFLVIPFGSSEPLKLEICINPPMVPPISFSFLCLDANIHRDPGWRDVPPDATRWQPDPCILQHPREFNPHAPAPTNWGLEDHRVIAELPQRADNHPPYIHHRQRRLLS