Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063586.t1 | RHN56826.1 | 63.8 | 260 | 89 | 1 | 19 | 273 | 94 | 353 | 5.30E-85 | 324.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063586.t1 | P49633 | 61.3 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 6.3e-18 | 92.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063586.t1 | G7KFS7 | 63.8 | 260 | 89 | 1 | 19 | 273 | 131 | 390 | 3.8e-85 | 324.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063586.t1 | MTR_5g076720 | 63.846 | 260 | 89 | 1 | 19 | 273 | 131 | 390 | 3.53e-112 | 328 |
MS.gene063586.t1 | MTR_5g076810 | 64.479 | 259 | 83 | 3 | 20 | 272 | 14 | 269 | 4.18e-110 | 319 |
MS.gene063586.t1 | MTR_2g038430 | 61.111 | 270 | 90 | 2 | 19 | 273 | 74 | 343 | 4.79e-105 | 309 |
MS.gene063586.t1 | MTR_1g046650 | 61.004 | 259 | 94 | 2 | 19 | 273 | 60 | 315 | 7.73e-105 | 307 |
MS.gene063586.t1 | MTR_1g046650 | 61.004 | 259 | 94 | 2 | 19 | 273 | 60 | 315 | 9.51e-105 | 307 |
MS.gene063586.t1 | MTR_1g046650 | 61.004 | 259 | 94 | 2 | 19 | 273 | 91 | 346 | 2.80e-104 | 307 |
MS.gene063586.t1 | MTR_1g046640 | 61.004 | 259 | 94 | 2 | 19 | 273 | 60 | 315 | 4.89e-104 | 305 |
MS.gene063586.t1 | MTR_5g067400 | 61.390 | 259 | 92 | 2 | 19 | 272 | 60 | 315 | 7.39e-103 | 302 |
MS.gene063586.t1 | MTR_2g038420 | 59.542 | 262 | 99 | 2 | 19 | 273 | 74 | 335 | 5.14e-102 | 301 |
MS.gene063586.t1 | MTR_1g046650 | 60.241 | 249 | 92 | 2 | 29 | 273 | 1 | 246 | 1.30e-100 | 294 |
MS.gene063586.t1 | MTR_7g024290 | 59.924 | 262 | 96 | 3 | 18 | 273 | 59 | 317 | 7.50e-99 | 292 |
MS.gene063586.t1 | MTR_5g076505 | 57.308 | 260 | 106 | 1 | 19 | 273 | 56 | 315 | 3.45e-98 | 290 |
MS.gene063586.t1 | MTR_5g076520 | 57.034 | 263 | 105 | 3 | 19 | 273 | 60 | 322 | 6.42e-95 | 282 |
MS.gene063586.t1 | MTR_7g094390 | 57.692 | 260 | 102 | 2 | 19 | 273 | 221 | 477 | 3.02e-94 | 286 |
MS.gene063586.t1 | MTR_5g061290 | 53.409 | 264 | 113 | 4 | 19 | 273 | 65 | 327 | 6.61e-91 | 272 |
MS.gene063586.t1 | MTR_5g076660 | 56.923 | 260 | 101 | 3 | 19 | 270 | 82 | 338 | 9.69e-91 | 272 |
MS.gene063586.t1 | MTR_5g076370 | 55.985 | 259 | 103 | 3 | 20 | 270 | 84 | 339 | 3.75e-90 | 271 |
MS.gene063586.t1 | MTR_5g076820 | 56.682 | 217 | 86 | 3 | 19 | 228 | 67 | 282 | 2.32e-74 | 229 |
MS.gene063586.t1 | MTR_5g076540 | 60.947 | 169 | 61 | 1 | 19 | 182 | 60 | 228 | 5.92e-61 | 193 |
MS.gene063586.t1 | MTR_5g077020 | 53.763 | 186 | 68 | 4 | 21 | 192 | 26 | 207 | 4.11e-54 | 175 |
MS.gene063586.t1 | MTR_4g058025 | 66.667 | 108 | 36 | 0 | 41 | 148 | 21 | 128 | 4.29e-42 | 143 |
MS.gene063586.t1 | MTR_4g094468 | 39.634 | 164 | 93 | 2 | 19 | 177 | 146 | 308 | 5.93e-32 | 120 |
MS.gene063586.t1 | MTR_7g105080 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 2.95e-24 | 95.1 |
MS.gene063586.t1 | MTR_3g092130 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 2.95e-24 | 95.1 |
MS.gene063586.t1 | MTR_1g059690 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 2.95e-24 | 95.1 |
MS.gene063586.t1 | MTR_5g092700 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 6.89e-24 | 94.7 |
MS.gene063586.t1 | MTR_5g092700 | 43.662 | 71 | 40 | 0 | 202 | 272 | 81 | 151 | 1.72e-13 | 67.0 |
MS.gene063586.t1 | MTR_4g073580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 6.89e-24 | 94.7 |
MS.gene063586.t1 | MTR_4g073580 | 43.662 | 71 | 40 | 0 | 202 | 272 | 81 | 151 | 1.72e-13 | 67.0 |
MS.gene063586.t1 | MTR_3g092130 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 8.10e-24 | 94.4 |
MS.gene063586.t1 | MTR_8g088060 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 9.45e-24 | 94.4 |
MS.gene063586.t1 | MTR_5g033960 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.05e-23 | 94.4 |
MS.gene063586.t1 | MTR_4g073580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 2.70e-23 | 94.0 |
MS.gene063586.t1 | MTR_4g088485 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.24e-23 | 94.4 |
MS.gene063586.t1 | MTR_4g088485 | 61.333 | 75 | 29 | 0 | 198 | 272 | 138 | 212 | 4.24e-23 | 94.4 |
MS.gene063586.t1 | MTR_4g088485 | 50.667 | 75 | 22 | 1 | 198 | 272 | 77 | 136 | 9.16e-15 | 71.6 |
MS.gene063586.t1 | MTR_7g116360 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.33e-23 | 94.7 |
MS.gene063586.t1 | MTR_7g116360 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.33e-23 | 94.7 |
MS.gene063586.t1 | MTR_7g116360 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.33e-23 | 94.7 |
MS.gene063586.t1 | MTR_1g066390 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 5.11e-23 | 94.7 |
MS.gene063586.t1 | MTR_1g066390 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 5.11e-23 | 94.7 |
MS.gene063586.t1 | MTR_1g066390 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 5.11e-23 | 94.7 |
MS.gene063586.t1 | MTR_7g116360 | 59.740 | 77 | 31 | 0 | 196 | 272 | 47 | 123 | 1.09e-22 | 94.7 |
MS.gene063586.t1 | MTR_7g116360 | 61.333 | 75 | 29 | 0 | 198 | 272 | 125 | 199 | 1.26e-22 | 94.4 |
MS.gene063586.t1 | MTR_7g116360 | 61.333 | 75 | 29 | 0 | 198 | 272 | 201 | 275 | 1.26e-22 | 94.4 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.22e-22 | 94.4 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.22e-22 | 94.4 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.22e-22 | 94.4 |
MS.gene063586.t1 | MTR_6g061930 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.59e-22 | 94.4 |
MS.gene063586.t1 | MTR_6g061930 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.59e-22 | 94.4 |
MS.gene063586.t1 | MTR_6g061930 | 61.333 | 75 | 29 | 0 | 198 | 272 | 214 | 288 | 1.59e-22 | 94.4 |
MS.gene063586.t1 | MTR_6g061930 | 50.667 | 75 | 22 | 1 | 198 | 272 | 153 | 212 | 2.11e-14 | 72.0 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.72e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.72e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.72e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 1.72e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 2.27e-22 | 94.0 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 2.27e-22 | 94.0 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 2.27e-22 | 94.0 |
MS.gene063586.t1 | MTR_4g080920 | 60.000 | 75 | 30 | 0 | 198 | 272 | 77 | 151 | 3.32e-22 | 92.4 |
MS.gene063586.t1 | MTR_4g080920 | 60.000 | 75 | 30 | 0 | 198 | 272 | 1 | 75 | 5.52e-22 | 91.7 |
MS.gene063586.t1 | MTR_4g080920 | 44.000 | 75 | 42 | 0 | 198 | 272 | 153 | 227 | 1.07e-13 | 69.3 |
MS.gene063586.t1 | MTR_8g081020 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.18e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g081020 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.18e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g081020 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.18e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g081020 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 4.18e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g081020 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 4.18e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.22e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.22e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.22e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 4.22e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 198 | 272 | 229 | 303 | 1.39e-21 | 93.2 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.26e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.26e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.26e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 4.26e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 4.26e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g080797 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.35e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g080797 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.35e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g080797 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.35e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g080797 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 4.35e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g080797 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 4.35e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.35e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.35e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.35e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 4.35e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 4.35e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 4.46e-22 | 95.5 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 9.95e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 9.95e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 9.95e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 9.95e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 381 | 455 | 9.95e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 198 | 272 | 457 | 531 | 9.95e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 381 | 455 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 381 | 455 | 7.37e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 9.30e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 9.30e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 9.30e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 9.30e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 9.30e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 381 | 455 | 9.30e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g081010 | 61.333 | 75 | 29 | 0 | 198 | 272 | 457 | 531 | 9.30e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 9.67e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 9.67e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 9.67e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 9.67e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 9.67e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 381 | 455 | 9.67e-22 | 94.7 |
MS.gene063586.t1 | MTR_8g018230 | 61.333 | 75 | 29 | 0 | 198 | 272 | 457 | 531 | 9.67e-22 | 94.7 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.81e-21 | 94.4 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.81e-21 | 94.4 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 1.81e-21 | 94.4 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 1.81e-21 | 94.4 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 381 | 455 | 1.81e-21 | 94.4 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 457 | 531 | 1.81e-21 | 94.4 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 533 | 607 | 1.81e-21 | 94.4 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 609 | 683 | 1.81e-21 | 94.4 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 685 | 759 | 1.81e-21 | 94.4 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 761 | 835 | 1.81e-21 | 94.4 |
MS.gene063586.t1 | MTR_4g088495 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.99e-21 | 94.0 |
MS.gene063586.t1 | MTR_5g061310 | 47.368 | 76 | 40 | 0 | 198 | 273 | 2 | 77 | 2.66e-18 | 77.8 |
MS.gene063586.t1 | MTR_8g479250 | 57.317 | 82 | 35 | 0 | 191 | 272 | 134 | 215 | 3.35e-18 | 82.8 |
MS.gene063586.t1 | MTR_8g479250 | 48.611 | 72 | 26 | 1 | 198 | 269 | 217 | 277 | 1.79e-12 | 66.6 |
MS.gene063586.t1 | MTR_4g009980 | 46.269 | 67 | 36 | 0 | 207 | 273 | 5 | 71 | 1.26e-14 | 67.8 |
MS.gene063586.t1 | MTR_5g076740 | 43.421 | 76 | 42 | 1 | 198 | 272 | 86 | 161 | 8.08e-13 | 65.5 |
MS.gene063586.t1 | MTR_5g076350 | 38.750 | 80 | 48 | 1 | 195 | 273 | 5 | 84 | 8.44e-12 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063586.t1 | AT3G52590 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.42e-24 | 94.7 |
MS.gene063586.t1 | AT2G36170 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.42e-24 | 94.7 |
MS.gene063586.t1 | AT1G23410 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 7.65e-24 | 94.7 |
MS.gene063586.t1 | AT2G35635 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 8.41e-24 | 94.7 |
MS.gene063586.t1 | AT2G35635 | 43.662 | 71 | 40 | 0 | 202 | 272 | 81 | 151 | 4.53e-13 | 65.9 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 8.82e-24 | 94.4 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 8.82e-24 | 94.4 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 8.82e-24 | 94.4 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 8.82e-24 | 94.4 |
MS.gene063586.t1 | AT2G47110 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 9.29e-24 | 94.7 |
MS.gene063586.t1 | AT2G47110 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 9.29e-24 | 94.7 |
MS.gene063586.t1 | AT1G31340 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.08e-23 | 94.4 |
MS.gene063586.t1 | AT1G31340 | 45.070 | 71 | 39 | 0 | 202 | 272 | 81 | 151 | 4.53e-14 | 68.6 |
MS.gene063586.t1 | AT3G62250 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.18e-23 | 94.4 |
MS.gene063586.t1 | AT1G55060 | 62.667 | 75 | 28 | 0 | 198 | 272 | 77 | 151 | 1.88e-23 | 95.9 |
MS.gene063586.t1 | AT1G55060 | 56.000 | 75 | 33 | 0 | 198 | 272 | 1 | 75 | 1.90e-20 | 87.8 |
MS.gene063586.t1 | AT1G55060 | 58.667 | 75 | 31 | 0 | 198 | 272 | 153 | 227 | 2.19e-20 | 87.4 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G05050 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.53e-23 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G03240 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G20620 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G20620 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G20620 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT5G20620 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 1.81e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT4G02890 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 1.82e-22 | 94.7 |
MS.gene063586.t1 | AT1G65350 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 2.04e-22 | 94.7 |
MS.gene063586.t1 | AT1G65350 | 61.333 | 75 | 29 | 0 | 198 | 272 | 152 | 226 | 4.77e-22 | 94.0 |
MS.gene063586.t1 | AT1G65350 | 60.000 | 75 | 29 | 1 | 198 | 272 | 77 | 150 | 1.09e-19 | 87.4 |
MS.gene063586.t1 | AT1G65350 | 47.191 | 89 | 33 | 1 | 198 | 272 | 228 | 316 | 6.93e-15 | 73.6 |
MS.gene063586.t1 | AT5G20620 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.51e-22 | 94.7 |
MS.gene063586.t1 | AT5G20620 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.51e-22 | 94.7 |
MS.gene063586.t1 | AT5G20620 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.51e-22 | 94.7 |
MS.gene063586.t1 | AT5G20620 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 4.51e-22 | 94.7 |
MS.gene063586.t1 | AT5G20620 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 4.51e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 4.56e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 381 | 455 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 1 | 75 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 77 | 151 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 153 | 227 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 229 | 303 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 305 | 379 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT4G05320 | 61.333 | 75 | 29 | 0 | 198 | 272 | 381 | 455 | 7.71e-22 | 94.7 |
MS.gene063586.t1 | AT5G37640 | 58.667 | 75 | 31 | 0 | 198 | 272 | 79 | 153 | 2.32e-21 | 92.0 |
MS.gene063586.t1 | AT5G37640 | 57.333 | 75 | 32 | 0 | 198 | 272 | 155 | 229 | 2.14e-19 | 86.7 |
MS.gene063586.t1 | AT5G37640 | 55.263 | 76 | 33 | 1 | 198 | 272 | 231 | 306 | 3.10e-16 | 77.8 |
MS.gene063586.t1 | AT5G37640 | 50.649 | 77 | 38 | 0 | 196 | 272 | 1 | 77 | 4.96e-16 | 77.0 |
MS.gene063586.t1 | AT3G09790 | 58.667 | 75 | 31 | 0 | 198 | 272 | 79 | 153 | 3.04e-19 | 87.8 |
MS.gene063586.t1 | AT3G09790 | 53.247 | 77 | 36 | 0 | 196 | 272 | 1 | 77 | 7.03e-18 | 83.6 |
MS.gene063586.t1 | AT3G09790 | 47.945 | 73 | 38 | 0 | 198 | 270 | 552 | 624 | 1.64e-13 | 70.5 |
MS.gene063586.t1 | AT3G09790 | 48.718 | 78 | 33 | 2 | 198 | 268 | 469 | 546 | 7.44e-12 | 65.9 |
MS.gene063586.t1 | AT3G09790 | 45.783 | 83 | 38 | 2 | 198 | 273 | 155 | 237 | 1.47e-11 | 64.7 |
MS.gene063586.t1 | AT3G09790 | 41.558 | 77 | 45 | 0 | 194 | 270 | 389 | 465 | 5.36e-11 | 63.2 |
MS.gene063586.t1 | AT3G09790 | 58.667 | 75 | 31 | 0 | 198 | 272 | 79 | 153 | 3.04e-19 | 87.8 |
MS.gene063586.t1 | AT3G09790 | 53.247 | 77 | 36 | 0 | 196 | 272 | 1 | 77 | 7.03e-18 | 83.6 |
MS.gene063586.t1 | AT3G09790 | 47.945 | 73 | 38 | 0 | 198 | 270 | 552 | 624 | 1.64e-13 | 70.5 |
MS.gene063586.t1 | AT3G09790 | 48.718 | 78 | 33 | 2 | 198 | 268 | 469 | 546 | 7.44e-12 | 65.9 |
MS.gene063586.t1 | AT3G09790 | 45.783 | 83 | 38 | 2 | 198 | 273 | 155 | 237 | 1.47e-11 | 64.7 |
MS.gene063586.t1 | AT3G09790 | 41.558 | 77 | 45 | 0 | 194 | 270 | 389 | 465 | 5.36e-11 | 63.2 |
MS.gene063586.t1 | AT1G53930 | 38.400 | 125 | 61 | 2 | 155 | 270 | 41 | 158 | 2.96e-16 | 74.7 |
MS.gene063586.t1 | AT5G37930 | 26.667 | 195 | 128 | 4 | 6 | 191 | 152 | 340 | 4.58e-15 | 74.7 |
MS.gene063586.t1 | AT1G53950 | 45.333 | 75 | 41 | 0 | 198 | 272 | 69 | 143 | 8.26e-14 | 67.8 |
MS.gene063586.t1 | AT5G42220 | 43.836 | 73 | 41 | 0 | 197 | 269 | 23 | 95 | 1.09e-13 | 71.2 |
MS.gene063586.t1 | AT5G42220 | 43.836 | 73 | 41 | 0 | 197 | 269 | 23 | 95 | 1.09e-13 | 71.2 |
Find 62 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAGAAAATCTCCGTGTTTA+TGG | 0.098832 | 5.2:-65245292 | None:intergenic |
CCATATTACTGTCCCCTTTC+AGG | 0.120398 | 5.2:+65245224 | MS.gene063586:CDS |
GAGCTCATTGTGATTCTATT+TGG | 0.198584 | 5.2:+65245584 | MS.gene063586:CDS |
TGCAAAGTTGGATATATAAA+AGG | 0.235724 | 5.2:+65245077 | MS.gene063586:CDS |
CACGTCCTCCTCCGCCTCCT+TGG | 0.238286 | 5.2:+65246048 | MS.gene063586:CDS |
AATAATAGTACTACGCATTT+AGG | 0.249894 | 5.2:+65245413 | MS.gene063586:CDS |
GCTTTGGTCCAAATGCTTAT+TGG | 0.269066 | 5.2:+65245456 | MS.gene063586:CDS |
GTCTGAACTATTAACCTTAA+TGG | 0.269313 | 5.2:-65245887 | None:intergenic |
TCTTGTTCGAATAGAAAATA+TGG | 0.272087 | 5.2:+65245155 | MS.gene063586:CDS |
GCAATCAATATTTGCAGCTT+TGG | 0.288257 | 5.2:+65245440 | MS.gene063586:CDS |
CAGATGGAACTATTTGTTAA+AGG | 0.290703 | 5.2:+65245844 | MS.gene063586:intron |
ACGTCCTCCTCCGCCTCCTT+GGG | 0.290784 | 5.2:+65246049 | MS.gene063586:CDS |
GTTGGATATATAAAAGGATT+TGG | 0.304729 | 5.2:+65245083 | MS.gene063586:CDS |
ATAAGGAATCATGAAGAAAA+AGG | 0.308912 | 5.2:+65245191 | MS.gene063586:CDS |
CATAACTTGTGTAACCTTAA+CGG | 0.321513 | 5.2:+65245637 | MS.gene063586:CDS |
TACTGTCCCCTTTCAGGTTG+TGG | 0.323492 | 5.2:+65245230 | MS.gene063586:CDS |
CTATTTGTTAAAGGCCTAGA+TGG | 0.347950 | 5.2:+65245853 | MS.gene063586:CDS |
CGAATAGAAAATATGGTTGC+AGG | 0.348705 | 5.2:+65245162 | MS.gene063586:CDS |
TGAGTATAGTTATGATATAT+TGG | 0.387396 | 5.2:+65245481 | MS.gene063586:CDS |
TGGAGAGACGATGACCATTA+AGG | 0.394969 | 5.2:+65245873 | MS.gene063586:CDS |
AACCAACGTCTGATCTTTGC+TGG | 0.397481 | 5.2:+65245964 | MS.gene063586:CDS |
CCTGAAAGGGGACAGTAATA+TGG | 0.399896 | 5.2:-65245224 | None:intergenic |
ATGGTTGCAGGGAGAAAATA+AGG | 0.402635 | 5.2:+65245174 | MS.gene063586:CDS |
TTCTCAATGGCAAACTGCTT+AGG | 0.403378 | 5.2:-65245110 | None:intergenic |
TACTCAGACCAATAAGCATT+TGG | 0.431978 | 5.2:-65245464 | None:intergenic |
TCAGACGTTGGTTGTGGACT+GGG | 0.435694 | 5.2:-65245954 | None:intergenic |
AGTATGTATGGTTGCAAAGT+TGG | 0.436465 | 5.2:+65245065 | None:intergenic |
TCTCAATGGCAAACTGCTTA+GGG | 0.446411 | 5.2:-65245109 | None:intergenic |
CAAGGAGGCGGAGGAGGACG+TGG | 0.446991 | 5.2:-65246047 | None:intergenic |
AACAAAGCCACAACCTGAAA+GGG | 0.459683 | 5.2:-65245237 | None:intergenic |
TGTTATAATCTGCAAGGGTC+CGG | 0.480124 | 5.2:-65246005 | None:intergenic |
CAAAGATCAGACGTTGGTTG+TGG | 0.482038 | 5.2:-65245960 | None:intergenic |
TATTGTGAATAGTGTCCAAC+GGG | 0.483325 | 5.2:+65245538 | MS.gene063586:CDS |
ATCAGACGTTGGTTGTGGAC+TGG | 0.486511 | 5.2:-65245955 | None:intergenic |
AGTCCCCAAGGAGGCGGAGG+AGG | 0.490735 | 5.2:-65246053 | None:intergenic |
TGGTCATCGTCTCTCCATCT+AGG | 0.494543 | 5.2:-65245867 | None:intergenic |
TTGTTATGGTAAATCATTCG+TGG | 0.504431 | 5.2:+65245322 | MS.gene063586:CDS |
GTGAATTGCAAGAGTATGTA+TGG | 0.511802 | 5.2:+65245053 | None:intergenic |
GGATATGGGAGGTACCGTTA+AGG | 0.521261 | 5.2:-65245651 | None:intergenic |
TGAAACCGTTGTTCTTCAAG+AGG | 0.538905 | 5.2:+65245364 | MS.gene063586:CDS |
CGTGGATGGTTGACGAACCT+TGG | 0.540412 | 5.2:-65246029 | None:intergenic |
TCTAGTCCCCAAGGAGGCGG+AGG | 0.544836 | 5.2:-65246056 | None:intergenic |
CAACAAAGCCACAACCTGAA+AGG | 0.547665 | 5.2:-65245238 | None:intergenic |
CTTGGATGTTATAATCTGCA+AGG | 0.566316 | 5.2:-65246011 | None:intergenic |
TCTTCTAGTCCCCAAGGAGG+CGG | 0.567077 | 5.2:-65246059 | None:intergenic |
GGATATATAAAAGGATTTGG+AGG | 0.568244 | 5.2:+65245086 | MS.gene063586:CDS |
GTAAACAACTAGAGGACGAC+CGG | 0.570439 | 5.2:+65245986 | MS.gene063586:CDS |
TGGTGGTCTTCTAGTCCCCA+AGG | 0.571500 | 5.2:-65246065 | None:intergenic |
CGTCCTCCTCCGCCTCCTTG+GGG | 0.574099 | 5.2:+65246050 | MS.gene063586:CDS |
GAGGCGGAGGAGGACGTGGA+TGG | 0.574689 | 5.2:-65246043 | None:intergenic |
CTTGCAGATTATAACATCCA+AGG | 0.577951 | 5.2:+65246012 | MS.gene063586:CDS |
AGATTGCAATAGATTCTCAA+TGG | 0.583487 | 5.2:-65245123 | None:intergenic |
CTATTGTGAATAGTGTCCAA+CGG | 0.603140 | 5.2:+65245537 | MS.gene063586:CDS |
GAATAGAAAATATGGTTGCA+GGG | 0.607339 | 5.2:+65245163 | MS.gene063586:CDS |
CTTTGCTGGTAAACAACTAG+AGG | 0.614990 | 5.2:+65245978 | MS.gene063586:CDS |
TTGGATGTTATAATCTGCAA+GGG | 0.630739 | 5.2:-65246010 | None:intergenic |
ACAAAGCCACAACCTGAAAG+GGG | 0.644893 | 5.2:-65245236 | None:intergenic |
TAAGGTTAATAGTTCAGACA+TGG | 0.664032 | 5.2:+65245891 | MS.gene063586:CDS |
TACCAGCAAAGATCAGACGT+TGG | 0.667812 | 5.2:-65245966 | None:intergenic |
GTTCTTCAAGAGGAAAACGA+TGG | 0.683114 | 5.2:+65245374 | MS.gene063586:CDS |
GATCATTTGAGCCATAAACA+CGG | 0.727856 | 5.2:+65245281 | MS.gene063586:CDS |
TGGTCTTCTAGTCCCCAAGG+AGG | 0.737872 | 5.2:-65246062 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATAATAAGACTTTAAT+AGG | - | chr5.2:65245699-65245718 | None:intergenic | 10.0% |
!!! | ATTTTCTTTTATTGATATAA+TGG | + | chr5.2:65245810-65245829 | MS.gene063586:intron | 10.0% |
!!! | TTTCTAATCAAATTTTGTTA+TGG | + | chr5.2:65245308-65245327 | MS.gene063586:CDS | 15.0% |
!! | AAATAAGCAATGCAAATAAA+AGG | - | chr5.2:65245675-65245694 | None:intergenic | 20.0% |
!! | TGAGTATAGTTATGATATAT+TGG | + | chr5.2:65245481-65245500 | MS.gene063586:CDS | 20.0% |
!!! | TATTGATATAATGGAAATTG+TGG | + | chr5.2:65245819-65245838 | MS.gene063586:intron | 20.0% |
! | AATAATAGTACTACGCATTT+AGG | + | chr5.2:65245413-65245432 | MS.gene063586:CDS | 25.0% |
! | ATAAGGAATCATGAAGAAAA+AGG | + | chr5.2:65245191-65245210 | MS.gene063586:CDS | 25.0% |
! | CAATGCAAATAAAAGGATAT+GGG | - | chr5.2:65245668-65245687 | None:intergenic | 25.0% |
! | GTTGGATATATAAAAGGATT+TGG | + | chr5.2:65245083-65245102 | MS.gene063586:CDS | 25.0% |
! | TCTTGTTCGAATAGAAAATA+TGG | + | chr5.2:65245155-65245174 | MS.gene063586:CDS | 25.0% |
! | TGCAAAGTTGGATATATAAA+AGG | + | chr5.2:65245077-65245096 | MS.gene063586:CDS | 25.0% |
AGATTGCAATAGATTCTCAA+TGG | - | chr5.2:65245126-65245145 | None:intergenic | 30.0% | |
GAATAGAAAATATGGTTGCA+GGG | + | chr5.2:65245163-65245182 | MS.gene063586:CDS | 30.0% | |
GCAATGCAAATAAAAGGATA+TGG | - | chr5.2:65245669-65245688 | None:intergenic | 30.0% | |
GGATATATAAAAGGATTTGG+AGG | + | chr5.2:65245086-65245105 | MS.gene063586:CDS | 30.0% | |
GTCTGAACTATTAACCTTAA+TGG | - | chr5.2:65245890-65245909 | None:intergenic | 30.0% | |
TAAGGTTAATAGTTCAGACA+TGG | + | chr5.2:65245891-65245910 | MS.gene063586:CDS | 30.0% | |
TTAGAAAATCTCCGTGTTTA+TGG | - | chr5.2:65245295-65245314 | None:intergenic | 30.0% | |
TTGGATGTTATAATCTGCAA+GGG | - | chr5.2:65246013-65246032 | None:intergenic | 30.0% | |
TTGTTATGGTAAATCATTCG+TGG | + | chr5.2:65245322-65245341 | MS.gene063586:CDS | 30.0% | |
! | CAGATGGAACTATTTGTTAA+AGG | + | chr5.2:65245844-65245863 | MS.gene063586:intron | 30.0% |
! | CATAACTTGTGTAACCTTAA+CGG | + | chr5.2:65245637-65245656 | MS.gene063586:CDS | 30.0% |
CGAATAGAAAATATGGTTGC+AGG | + | chr5.2:65245162-65245181 | MS.gene063586:CDS | 35.0% | |
CTATTGTGAATAGTGTCCAA+CGG | + | chr5.2:65245537-65245556 | MS.gene063586:CDS | 35.0% | |
CTTGCAGATTATAACATCCA+AGG | + | chr5.2:65246012-65246031 | MS.gene063586:CDS | 35.0% | |
CTTGGATGTTATAATCTGCA+AGG | - | chr5.2:65246014-65246033 | None:intergenic | 35.0% | |
GAGCTCATTGTGATTCTATT+TGG | + | chr5.2:65245584-65245603 | MS.gene063586:CDS | 35.0% | |
GATCATTTGAGCCATAAACA+CGG | + | chr5.2:65245281-65245300 | MS.gene063586:CDS | 35.0% | |
GCAATCAATATTTGCAGCTT+TGG | + | chr5.2:65245440-65245459 | MS.gene063586:CDS | 35.0% | |
TACTCAGACCAATAAGCATT+TGG | - | chr5.2:65245467-65245486 | None:intergenic | 35.0% | |
TATTGTGAATAGTGTCCAAC+GGG | + | chr5.2:65245538-65245557 | MS.gene063586:CDS | 35.0% | |
TGCAAATAAAAGGATATGGG+AGG | - | chr5.2:65245665-65245684 | None:intergenic | 35.0% | |
! | CTATTTGTTAAAGGCCTAGA+TGG | + | chr5.2:65245853-65245872 | MS.gene063586:CDS | 35.0% |
! | GTTTTCCTCTTGAAGAACAA+CGG | - | chr5.2:65245372-65245391 | None:intergenic | 35.0% |
!!! | GATTTTCTAAAGTAACCCGT+TGG | - | chr5.2:65245556-65245575 | None:intergenic | 35.0% |
AACAAAGCCACAACCTGAAA+GGG | - | chr5.2:65245240-65245259 | None:intergenic | 40.0% | |
AATGGAAATTGTGGAGCAGA+TGG | + | chr5.2:65245828-65245847 | MS.gene063586:intron | 40.0% | |
ATGGTTGCAGGGAGAAAATA+AGG | + | chr5.2:65245174-65245193 | MS.gene063586:CDS | 40.0% | |
CTTTGCTGGTAAACAACTAG+AGG | + | chr5.2:65245978-65245997 | MS.gene063586:CDS | 40.0% | |
GCTTTGGTCCAAATGCTTAT+TGG | + | chr5.2:65245456-65245475 | MS.gene063586:CDS | 40.0% | |
GTTCTTCAAGAGGAAAACGA+TGG | + | chr5.2:65245374-65245393 | MS.gene063586:CDS | 40.0% | |
TCTCAATGGCAAACTGCTTA+GGG | - | chr5.2:65245112-65245131 | None:intergenic | 40.0% | |
TGAAACCGTTGTTCTTCAAG+AGG | + | chr5.2:65245364-65245383 | MS.gene063586:CDS | 40.0% | |
TGTTATAATCTGCAAGGGTC+CGG | - | chr5.2:65246008-65246027 | None:intergenic | 40.0% | |
TTCTCAATGGCAAACTGCTT+AGG | - | chr5.2:65245113-65245132 | None:intergenic | 40.0% | |
AACCAACGTCTGATCTTTGC+TGG | + | chr5.2:65245964-65245983 | MS.gene063586:CDS | 45.0% | |
ACAAAGCCACAACCTGAAAG+GGG | - | chr5.2:65245239-65245258 | None:intergenic | 45.0% | |
CAACAAAGCCACAACCTGAA+AGG | - | chr5.2:65245241-65245260 | None:intergenic | 45.0% | |
CCATATTACTGTCCCCTTTC+AGG | + | chr5.2:65245224-65245243 | MS.gene063586:CDS | 45.0% | |
CCTGAAAGGGGACAGTAATA+TGG | - | chr5.2:65245227-65245246 | None:intergenic | 45.0% | |
GTAAACAACTAGAGGACGAC+CGG | + | chr5.2:65245986-65246005 | MS.gene063586:CDS | 45.0% | |
TACCAGCAAAGATCAGACGT+TGG | - | chr5.2:65245969-65245988 | None:intergenic | 45.0% | |
TGGAGAGACGATGACCATTA+AGG | + | chr5.2:65245873-65245892 | MS.gene063586:CDS | 45.0% | |
! | CAAAGATCAGACGTTGGTTG+TGG | - | chr5.2:65245963-65245982 | None:intergenic | 45.0% |
TGGTCATCGTCTCTCCATCT+AGG | - | chr5.2:65245870-65245889 | None:intergenic | 50.0% | |
! | ATCAGACGTTGGTTGTGGAC+TGG | - | chr5.2:65245958-65245977 | None:intergenic | 50.0% |
! | TCAGACGTTGGTTGTGGACT+GGG | - | chr5.2:65245957-65245976 | None:intergenic | 50.0% |
!! | GGATATGGGAGGTACCGTTA+AGG | - | chr5.2:65245654-65245673 | None:intergenic | 50.0% |
!! | TACTGTCCCCTTTCAGGTTG+TGG | + | chr5.2:65245230-65245249 | MS.gene063586:CDS | 50.0% |
CGTGGATGGTTGACGAACCT+TGG | - | chr5.2:65246032-65246051 | None:intergenic | 55.0% | |
ACGTCCTCCTCCGCCTCCTT+GGG | + | chr5.2:65246049-65246068 | MS.gene063586:CDS | 65.0% | |
AGTCCCCAAGGAGGCGGAGG+AGG | - | chr5.2:65246056-65246075 | None:intergenic | 70.0% | |
CAAGGAGGCGGAGGAGGACG+TGG | - | chr5.2:65246050-65246069 | None:intergenic | 70.0% | |
CACGTCCTCCTCCGCCTCCT+TGG | + | chr5.2:65246048-65246067 | MS.gene063586:CDS | 70.0% | |
CGTCCTCCTCCGCCTCCTTG+GGG | + | chr5.2:65246050-65246069 | MS.gene063586:CDS | 70.0% | |
GAGGCGGAGGAGGACGTGGA+TGG | - | chr5.2:65246046-65246065 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 65245068 | 65246077 | 65245068 | ID=MS.gene063586 |
chr5.2 | mRNA | 65245068 | 65246077 | 65245068 | ID=MS.gene063586.t1;Parent=MS.gene063586 |
chr5.2 | exon | 65245068 | 65245658 | 65245068 | ID=MS.gene063586.t1.exon1;Parent=MS.gene063586.t1 |
chr5.2 | CDS | 65245068 | 65245658 | 65245068 | ID=cds.MS.gene063586.t1;Parent=MS.gene063586.t1 |
chr5.2 | exon | 65245847 | 65246077 | 65245847 | ID=MS.gene063586.t1.exon2;Parent=MS.gene063586.t1 |
chr5.2 | CDS | 65245847 | 65246077 | 65245847 | ID=cds.MS.gene063586.t1;Parent=MS.gene063586.t1 |
Gene Sequence |
Protein sequence |