AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063586


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063586.t1 MTR_5g076720 63.846 260 89 1 19 273 131 390 3.53e-112 328
MS.gene063586.t1 MTR_5g076810 64.479 259 83 3 20 272 14 269 4.18e-110 319
MS.gene063586.t1 MTR_2g038430 61.111 270 90 2 19 273 74 343 4.79e-105 309
MS.gene063586.t1 MTR_1g046650 61.004 259 94 2 19 273 60 315 7.73e-105 307
MS.gene063586.t1 MTR_1g046650 61.004 259 94 2 19 273 60 315 9.51e-105 307
MS.gene063586.t1 MTR_1g046650 61.004 259 94 2 19 273 91 346 2.80e-104 307
MS.gene063586.t1 MTR_1g046640 61.004 259 94 2 19 273 60 315 4.89e-104 305
MS.gene063586.t1 MTR_5g067400 61.390 259 92 2 19 272 60 315 7.39e-103 302
MS.gene063586.t1 MTR_2g038420 59.542 262 99 2 19 273 74 335 5.14e-102 301
MS.gene063586.t1 MTR_1g046650 60.241 249 92 2 29 273 1 246 1.30e-100 294
MS.gene063586.t1 MTR_7g024290 59.924 262 96 3 18 273 59 317 7.50e-99 292
MS.gene063586.t1 MTR_5g076505 57.308 260 106 1 19 273 56 315 3.45e-98 290
MS.gene063586.t1 MTR_5g076520 57.034 263 105 3 19 273 60 322 6.42e-95 282
MS.gene063586.t1 MTR_7g094390 57.692 260 102 2 19 273 221 477 3.02e-94 286
MS.gene063586.t1 MTR_5g061290 53.409 264 113 4 19 273 65 327 6.61e-91 272
MS.gene063586.t1 MTR_5g076660 56.923 260 101 3 19 270 82 338 9.69e-91 272
MS.gene063586.t1 MTR_5g076370 55.985 259 103 3 20 270 84 339 3.75e-90 271
MS.gene063586.t1 MTR_5g076820 56.682 217 86 3 19 228 67 282 2.32e-74 229
MS.gene063586.t1 MTR_5g076540 60.947 169 61 1 19 182 60 228 5.92e-61 193
MS.gene063586.t1 MTR_5g077020 53.763 186 68 4 21 192 26 207 4.11e-54 175
MS.gene063586.t1 MTR_4g058025 66.667 108 36 0 41 148 21 128 4.29e-42 143
MS.gene063586.t1 MTR_4g094468 39.634 164 93 2 19 177 146 308 5.93e-32 120
MS.gene063586.t1 MTR_7g105080 61.333 75 29 0 198 272 1 75 2.95e-24 95.1
MS.gene063586.t1 MTR_3g092130 61.333 75 29 0 198 272 1 75 2.95e-24 95.1
MS.gene063586.t1 MTR_1g059690 61.333 75 29 0 198 272 1 75 2.95e-24 95.1
MS.gene063586.t1 MTR_5g092700 61.333 75 29 0 198 272 1 75 6.89e-24 94.7
MS.gene063586.t1 MTR_5g092700 43.662 71 40 0 202 272 81 151 1.72e-13 67.0
MS.gene063586.t1 MTR_4g073580 61.333 75 29 0 198 272 1 75 6.89e-24 94.7
MS.gene063586.t1 MTR_4g073580 43.662 71 40 0 202 272 81 151 1.72e-13 67.0
MS.gene063586.t1 MTR_3g092130 61.333 75 29 0 198 272 1 75 8.10e-24 94.4
MS.gene063586.t1 MTR_8g088060 61.333 75 29 0 198 272 1 75 9.45e-24 94.4
MS.gene063586.t1 MTR_5g033960 61.333 75 29 0 198 272 1 75 1.05e-23 94.4
MS.gene063586.t1 MTR_4g073580 61.333 75 29 0 198 272 1 75 2.70e-23 94.0
MS.gene063586.t1 MTR_4g088485 61.333 75 29 0 198 272 1 75 4.24e-23 94.4
MS.gene063586.t1 MTR_4g088485 61.333 75 29 0 198 272 138 212 4.24e-23 94.4
MS.gene063586.t1 MTR_4g088485 50.667 75 22 1 198 272 77 136 9.16e-15 71.6
MS.gene063586.t1 MTR_7g116360 61.333 75 29 0 198 272 1 75 4.33e-23 94.7
MS.gene063586.t1 MTR_7g116360 61.333 75 29 0 198 272 77 151 4.33e-23 94.7
MS.gene063586.t1 MTR_7g116360 61.333 75 29 0 198 272 153 227 4.33e-23 94.7
MS.gene063586.t1 MTR_1g066390 61.333 75 29 0 198 272 1 75 5.11e-23 94.7
MS.gene063586.t1 MTR_1g066390 61.333 75 29 0 198 272 77 151 5.11e-23 94.7
MS.gene063586.t1 MTR_1g066390 61.333 75 29 0 198 272 153 227 5.11e-23 94.7
MS.gene063586.t1 MTR_7g116360 59.740 77 31 0 196 272 47 123 1.09e-22 94.7
MS.gene063586.t1 MTR_7g116360 61.333 75 29 0 198 272 125 199 1.26e-22 94.4
MS.gene063586.t1 MTR_7g116360 61.333 75 29 0 198 272 201 275 1.26e-22 94.4
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 1 75 1.22e-22 94.4
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 77 151 1.22e-22 94.4
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 153 227 1.22e-22 94.4
MS.gene063586.t1 MTR_6g061930 61.333 75 29 0 198 272 1 75 1.59e-22 94.4
MS.gene063586.t1 MTR_6g061930 61.333 75 29 0 198 272 77 151 1.59e-22 94.4
MS.gene063586.t1 MTR_6g061930 61.333 75 29 0 198 272 214 288 1.59e-22 94.4
MS.gene063586.t1 MTR_6g061930 50.667 75 22 1 198 272 153 212 2.11e-14 72.0
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 1 75 1.72e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 77 151 1.72e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 153 227 1.72e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 229 303 1.72e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 1 75 2.27e-22 94.0
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 77 151 2.27e-22 94.0
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 153 227 2.27e-22 94.0
MS.gene063586.t1 MTR_4g080920 60.000 75 30 0 198 272 77 151 3.32e-22 92.4
MS.gene063586.t1 MTR_4g080920 60.000 75 30 0 198 272 1 75 5.52e-22 91.7
MS.gene063586.t1 MTR_4g080920 44.000 75 42 0 198 272 153 227 1.07e-13 69.3
MS.gene063586.t1 MTR_8g081020 61.333 75 29 0 198 272 1 75 4.18e-22 94.7
MS.gene063586.t1 MTR_8g081020 61.333 75 29 0 198 272 77 151 4.18e-22 94.7
MS.gene063586.t1 MTR_8g081020 61.333 75 29 0 198 272 153 227 4.18e-22 94.7
MS.gene063586.t1 MTR_8g081020 61.333 75 29 0 198 272 229 303 4.18e-22 94.7
MS.gene063586.t1 MTR_8g081020 61.333 75 29 0 198 272 305 379 4.18e-22 94.7
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 1 75 4.22e-22 94.7
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 77 151 4.22e-22 94.7
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 153 227 4.22e-22 94.7
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 305 379 4.22e-22 94.7
MS.gene063586.t1 MTR_4g091580 60.000 75 30 0 198 272 229 303 1.39e-21 93.2
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 1 75 4.26e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 77 151 4.26e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 153 227 4.26e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 229 303 4.26e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 305 379 4.26e-22 94.7
MS.gene063586.t1 MTR_4g080797 61.333 75 29 0 198 272 1 75 4.35e-22 94.7
MS.gene063586.t1 MTR_4g080797 61.333 75 29 0 198 272 77 151 4.35e-22 94.7
MS.gene063586.t1 MTR_4g080797 61.333 75 29 0 198 272 153 227 4.35e-22 94.7
MS.gene063586.t1 MTR_4g080797 61.333 75 29 0 198 272 229 303 4.35e-22 94.7
MS.gene063586.t1 MTR_4g080797 61.333 75 29 0 198 272 305 379 4.35e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 1 75 4.35e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 77 151 4.35e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 153 227 4.35e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 229 303 4.35e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 305 379 4.35e-22 94.7
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 305 379 4.46e-22 95.5
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 1 75 9.95e-22 94.7
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 77 151 9.95e-22 94.7
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 153 227 9.95e-22 94.7
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 229 303 9.95e-22 94.7
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 381 455 9.95e-22 94.7
MS.gene063586.t1 MTR_4g091580 61.333 75 29 0 198 272 457 531 9.95e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 1 75 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 77 151 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 153 227 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 229 303 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 305 379 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 381 455 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 1 75 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 77 151 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 153 227 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 229 303 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 305 379 7.37e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 381 455 7.37e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 1 75 9.30e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 77 151 9.30e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 153 227 9.30e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 229 303 9.30e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 305 379 9.30e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 381 455 9.30e-22 94.7
MS.gene063586.t1 MTR_4g081010 61.333 75 29 0 198 272 457 531 9.30e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 1 75 9.67e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 77 151 9.67e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 153 227 9.67e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 229 303 9.67e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 305 379 9.67e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 381 455 9.67e-22 94.7
MS.gene063586.t1 MTR_8g018230 61.333 75 29 0 198 272 457 531 9.67e-22 94.7
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 77 151 1.81e-21 94.4
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 153 227 1.81e-21 94.4
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 229 303 1.81e-21 94.4
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 305 379 1.81e-21 94.4
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 381 455 1.81e-21 94.4
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 457 531 1.81e-21 94.4
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 533 607 1.81e-21 94.4
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 609 683 1.81e-21 94.4
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 685 759 1.81e-21 94.4
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 761 835 1.81e-21 94.4
MS.gene063586.t1 MTR_4g088495 61.333 75 29 0 198 272 1 75 1.99e-21 94.0
MS.gene063586.t1 MTR_5g061310 47.368 76 40 0 198 273 2 77 2.66e-18 77.8
MS.gene063586.t1 MTR_8g479250 57.317 82 35 0 191 272 134 215 3.35e-18 82.8
MS.gene063586.t1 MTR_8g479250 48.611 72 26 1 198 269 217 277 1.79e-12 66.6
MS.gene063586.t1 MTR_4g009980 46.269 67 36 0 207 273 5 71 1.26e-14 67.8
MS.gene063586.t1 MTR_5g076740 43.421 76 42 1 198 272 86 161 8.08e-13 65.5
MS.gene063586.t1 MTR_5g076350 38.750 80 48 1 195 273 5 84 8.44e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063586.t1 AT3G52590 61.333 75 29 0 198 272 1 75 4.42e-24 94.7
MS.gene063586.t1 AT2G36170 61.333 75 29 0 198 272 1 75 4.42e-24 94.7
MS.gene063586.t1 AT1G23410 61.333 75 29 0 198 272 1 75 7.65e-24 94.7
MS.gene063586.t1 AT2G35635 61.333 75 29 0 198 272 1 75 8.41e-24 94.7
MS.gene063586.t1 AT2G35635 43.662 71 40 0 202 272 81 151 4.53e-13 65.9
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 1 75 8.82e-24 94.4
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 77 151 8.82e-24 94.4
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 1 75 8.82e-24 94.4
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 77 151 8.82e-24 94.4
MS.gene063586.t1 AT2G47110 61.333 75 29 0 198 272 1 75 9.29e-24 94.7
MS.gene063586.t1 AT2G47110 61.333 75 29 0 198 272 1 75 9.29e-24 94.7
MS.gene063586.t1 AT1G31340 61.333 75 29 0 198 272 1 75 1.08e-23 94.4
MS.gene063586.t1 AT1G31340 45.070 71 39 0 202 272 81 151 4.53e-14 68.6
MS.gene063586.t1 AT3G62250 61.333 75 29 0 198 272 1 75 1.18e-23 94.4
MS.gene063586.t1 AT1G55060 62.667 75 28 0 198 272 77 151 1.88e-23 95.9
MS.gene063586.t1 AT1G55060 56.000 75 33 0 198 272 1 75 1.90e-20 87.8
MS.gene063586.t1 AT1G55060 58.667 75 31 0 198 272 153 227 2.19e-20 87.4
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 1 75 4.53e-23 94.7
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 77 151 4.53e-23 94.7
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 153 227 4.53e-23 94.7
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 1 75 4.53e-23 94.7
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 77 151 4.53e-23 94.7
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 153 227 4.53e-23 94.7
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 1 75 4.53e-23 94.7
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 77 151 4.53e-23 94.7
MS.gene063586.t1 AT4G05050 61.333 75 29 0 198 272 153 227 4.53e-23 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 1 75 4.53e-23 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 77 151 4.53e-23 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 153 227 4.53e-23 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 1 75 4.53e-23 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 77 151 4.53e-23 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 153 227 4.53e-23 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 1 75 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 77 151 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 153 227 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 229 303 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 1 75 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 77 151 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 153 227 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 229 303 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 1 75 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 77 151 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 153 227 1.81e-22 94.7
MS.gene063586.t1 AT5G03240 61.333 75 29 0 198 272 229 303 1.81e-22 94.7
MS.gene063586.t1 AT5G20620 61.333 75 29 0 198 272 1 75 1.81e-22 94.7
MS.gene063586.t1 AT5G20620 61.333 75 29 0 198 272 77 151 1.81e-22 94.7
MS.gene063586.t1 AT5G20620 61.333 75 29 0 198 272 153 227 1.81e-22 94.7
MS.gene063586.t1 AT5G20620 61.333 75 29 0 198 272 229 303 1.81e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 1 75 1.82e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 77 151 1.82e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 153 227 1.82e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 229 303 1.82e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 1 75 1.82e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 77 151 1.82e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 153 227 1.82e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 229 303 1.82e-22 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 1 75 1.82e-22 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 77 151 1.82e-22 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 153 227 1.82e-22 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 229 303 1.82e-22 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 1 75 1.82e-22 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 77 151 1.82e-22 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 153 227 1.82e-22 94.7
MS.gene063586.t1 AT4G02890 61.333 75 29 0 198 272 229 303 1.82e-22 94.7
MS.gene063586.t1 AT1G65350 61.333 75 29 0 198 272 1 75 2.04e-22 94.7
MS.gene063586.t1 AT1G65350 61.333 75 29 0 198 272 152 226 4.77e-22 94.0
MS.gene063586.t1 AT1G65350 60.000 75 29 1 198 272 77 150 1.09e-19 87.4
MS.gene063586.t1 AT1G65350 47.191 89 33 1 198 272 228 316 6.93e-15 73.6
MS.gene063586.t1 AT5G20620 61.333 75 29 0 198 272 1 75 4.51e-22 94.7
MS.gene063586.t1 AT5G20620 61.333 75 29 0 198 272 77 151 4.51e-22 94.7
MS.gene063586.t1 AT5G20620 61.333 75 29 0 198 272 153 227 4.51e-22 94.7
MS.gene063586.t1 AT5G20620 61.333 75 29 0 198 272 229 303 4.51e-22 94.7
MS.gene063586.t1 AT5G20620 61.333 75 29 0 198 272 305 379 4.51e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 1 75 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 77 151 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 153 227 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 229 303 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 305 379 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 1 75 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 77 151 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 153 227 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 229 303 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 305 379 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 1 75 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 77 151 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 153 227 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 229 303 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 305 379 4.56e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 1 75 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 77 151 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 153 227 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 229 303 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 305 379 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 381 455 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 1 75 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 77 151 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 153 227 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 229 303 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 305 379 7.71e-22 94.7
MS.gene063586.t1 AT4G05320 61.333 75 29 0 198 272 381 455 7.71e-22 94.7
MS.gene063586.t1 AT5G37640 58.667 75 31 0 198 272 79 153 2.32e-21 92.0
MS.gene063586.t1 AT5G37640 57.333 75 32 0 198 272 155 229 2.14e-19 86.7
MS.gene063586.t1 AT5G37640 55.263 76 33 1 198 272 231 306 3.10e-16 77.8
MS.gene063586.t1 AT5G37640 50.649 77 38 0 196 272 1 77 4.96e-16 77.0
MS.gene063586.t1 AT3G09790 58.667 75 31 0 198 272 79 153 3.04e-19 87.8
MS.gene063586.t1 AT3G09790 53.247 77 36 0 196 272 1 77 7.03e-18 83.6
MS.gene063586.t1 AT3G09790 47.945 73 38 0 198 270 552 624 1.64e-13 70.5
MS.gene063586.t1 AT3G09790 48.718 78 33 2 198 268 469 546 7.44e-12 65.9
MS.gene063586.t1 AT3G09790 45.783 83 38 2 198 273 155 237 1.47e-11 64.7
MS.gene063586.t1 AT3G09790 41.558 77 45 0 194 270 389 465 5.36e-11 63.2
MS.gene063586.t1 AT3G09790 58.667 75 31 0 198 272 79 153 3.04e-19 87.8
MS.gene063586.t1 AT3G09790 53.247 77 36 0 196 272 1 77 7.03e-18 83.6
MS.gene063586.t1 AT3G09790 47.945 73 38 0 198 270 552 624 1.64e-13 70.5
MS.gene063586.t1 AT3G09790 48.718 78 33 2 198 268 469 546 7.44e-12 65.9
MS.gene063586.t1 AT3G09790 45.783 83 38 2 198 273 155 237 1.47e-11 64.7
MS.gene063586.t1 AT3G09790 41.558 77 45 0 194 270 389 465 5.36e-11 63.2
MS.gene063586.t1 AT1G53930 38.400 125 61 2 155 270 41 158 2.96e-16 74.7
MS.gene063586.t1 AT5G37930 26.667 195 128 4 6 191 152 340 4.58e-15 74.7
MS.gene063586.t1 AT1G53950 45.333 75 41 0 198 272 69 143 8.26e-14 67.8
MS.gene063586.t1 AT5G42220 43.836 73 41 0 197 269 23 95 1.09e-13 71.2
MS.gene063586.t1 AT5G42220 43.836 73 41 0 197 269 23 95 1.09e-13 71.2

Find 62 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGAAAATCTCCGTGTTTA+TGG 0.098832 5.2:-65245292 None:intergenic
CCATATTACTGTCCCCTTTC+AGG 0.120398 5.2:+65245224 MS.gene063586:CDS
GAGCTCATTGTGATTCTATT+TGG 0.198584 5.2:+65245584 MS.gene063586:CDS
TGCAAAGTTGGATATATAAA+AGG 0.235724 5.2:+65245077 MS.gene063586:CDS
CACGTCCTCCTCCGCCTCCT+TGG 0.238286 5.2:+65246048 MS.gene063586:CDS
AATAATAGTACTACGCATTT+AGG 0.249894 5.2:+65245413 MS.gene063586:CDS
GCTTTGGTCCAAATGCTTAT+TGG 0.269066 5.2:+65245456 MS.gene063586:CDS
GTCTGAACTATTAACCTTAA+TGG 0.269313 5.2:-65245887 None:intergenic
TCTTGTTCGAATAGAAAATA+TGG 0.272087 5.2:+65245155 MS.gene063586:CDS
GCAATCAATATTTGCAGCTT+TGG 0.288257 5.2:+65245440 MS.gene063586:CDS
CAGATGGAACTATTTGTTAA+AGG 0.290703 5.2:+65245844 MS.gene063586:intron
ACGTCCTCCTCCGCCTCCTT+GGG 0.290784 5.2:+65246049 MS.gene063586:CDS
GTTGGATATATAAAAGGATT+TGG 0.304729 5.2:+65245083 MS.gene063586:CDS
ATAAGGAATCATGAAGAAAA+AGG 0.308912 5.2:+65245191 MS.gene063586:CDS
CATAACTTGTGTAACCTTAA+CGG 0.321513 5.2:+65245637 MS.gene063586:CDS
TACTGTCCCCTTTCAGGTTG+TGG 0.323492 5.2:+65245230 MS.gene063586:CDS
CTATTTGTTAAAGGCCTAGA+TGG 0.347950 5.2:+65245853 MS.gene063586:CDS
CGAATAGAAAATATGGTTGC+AGG 0.348705 5.2:+65245162 MS.gene063586:CDS
TGAGTATAGTTATGATATAT+TGG 0.387396 5.2:+65245481 MS.gene063586:CDS
TGGAGAGACGATGACCATTA+AGG 0.394969 5.2:+65245873 MS.gene063586:CDS
AACCAACGTCTGATCTTTGC+TGG 0.397481 5.2:+65245964 MS.gene063586:CDS
CCTGAAAGGGGACAGTAATA+TGG 0.399896 5.2:-65245224 None:intergenic
ATGGTTGCAGGGAGAAAATA+AGG 0.402635 5.2:+65245174 MS.gene063586:CDS
TTCTCAATGGCAAACTGCTT+AGG 0.403378 5.2:-65245110 None:intergenic
TACTCAGACCAATAAGCATT+TGG 0.431978 5.2:-65245464 None:intergenic
TCAGACGTTGGTTGTGGACT+GGG 0.435694 5.2:-65245954 None:intergenic
AGTATGTATGGTTGCAAAGT+TGG 0.436465 5.2:+65245065 None:intergenic
TCTCAATGGCAAACTGCTTA+GGG 0.446411 5.2:-65245109 None:intergenic
CAAGGAGGCGGAGGAGGACG+TGG 0.446991 5.2:-65246047 None:intergenic
AACAAAGCCACAACCTGAAA+GGG 0.459683 5.2:-65245237 None:intergenic
TGTTATAATCTGCAAGGGTC+CGG 0.480124 5.2:-65246005 None:intergenic
CAAAGATCAGACGTTGGTTG+TGG 0.482038 5.2:-65245960 None:intergenic
TATTGTGAATAGTGTCCAAC+GGG 0.483325 5.2:+65245538 MS.gene063586:CDS
ATCAGACGTTGGTTGTGGAC+TGG 0.486511 5.2:-65245955 None:intergenic
AGTCCCCAAGGAGGCGGAGG+AGG 0.490735 5.2:-65246053 None:intergenic
TGGTCATCGTCTCTCCATCT+AGG 0.494543 5.2:-65245867 None:intergenic
TTGTTATGGTAAATCATTCG+TGG 0.504431 5.2:+65245322 MS.gene063586:CDS
GTGAATTGCAAGAGTATGTA+TGG 0.511802 5.2:+65245053 None:intergenic
GGATATGGGAGGTACCGTTA+AGG 0.521261 5.2:-65245651 None:intergenic
TGAAACCGTTGTTCTTCAAG+AGG 0.538905 5.2:+65245364 MS.gene063586:CDS
CGTGGATGGTTGACGAACCT+TGG 0.540412 5.2:-65246029 None:intergenic
TCTAGTCCCCAAGGAGGCGG+AGG 0.544836 5.2:-65246056 None:intergenic
CAACAAAGCCACAACCTGAA+AGG 0.547665 5.2:-65245238 None:intergenic
CTTGGATGTTATAATCTGCA+AGG 0.566316 5.2:-65246011 None:intergenic
TCTTCTAGTCCCCAAGGAGG+CGG 0.567077 5.2:-65246059 None:intergenic
GGATATATAAAAGGATTTGG+AGG 0.568244 5.2:+65245086 MS.gene063586:CDS
GTAAACAACTAGAGGACGAC+CGG 0.570439 5.2:+65245986 MS.gene063586:CDS
TGGTGGTCTTCTAGTCCCCA+AGG 0.571500 5.2:-65246065 None:intergenic
CGTCCTCCTCCGCCTCCTTG+GGG 0.574099 5.2:+65246050 MS.gene063586:CDS
GAGGCGGAGGAGGACGTGGA+TGG 0.574689 5.2:-65246043 None:intergenic
CTTGCAGATTATAACATCCA+AGG 0.577951 5.2:+65246012 MS.gene063586:CDS
AGATTGCAATAGATTCTCAA+TGG 0.583487 5.2:-65245123 None:intergenic
CTATTGTGAATAGTGTCCAA+CGG 0.603140 5.2:+65245537 MS.gene063586:CDS
GAATAGAAAATATGGTTGCA+GGG 0.607339 5.2:+65245163 MS.gene063586:CDS
CTTTGCTGGTAAACAACTAG+AGG 0.614990 5.2:+65245978 MS.gene063586:CDS
TTGGATGTTATAATCTGCAA+GGG 0.630739 5.2:-65246010 None:intergenic
ACAAAGCCACAACCTGAAAG+GGG 0.644893 5.2:-65245236 None:intergenic
TAAGGTTAATAGTTCAGACA+TGG 0.664032 5.2:+65245891 MS.gene063586:CDS
TACCAGCAAAGATCAGACGT+TGG 0.667812 5.2:-65245966 None:intergenic
GTTCTTCAAGAGGAAAACGA+TGG 0.683114 5.2:+65245374 MS.gene063586:CDS
GATCATTTGAGCCATAAACA+CGG 0.727856 5.2:+65245281 MS.gene063586:CDS
TGGTCTTCTAGTCCCCAAGG+AGG 0.737872 5.2:-65246062 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAATAAGACTTTAAT+AGG - chr5.2:65245699-65245718 None:intergenic 10.0%
!!! ATTTTCTTTTATTGATATAA+TGG + chr5.2:65245810-65245829 MS.gene063586:intron 10.0%
!!! TTTCTAATCAAATTTTGTTA+TGG + chr5.2:65245308-65245327 MS.gene063586:CDS 15.0%
!! AAATAAGCAATGCAAATAAA+AGG - chr5.2:65245675-65245694 None:intergenic 20.0%
!! TGAGTATAGTTATGATATAT+TGG + chr5.2:65245481-65245500 MS.gene063586:CDS 20.0%
!!! TATTGATATAATGGAAATTG+TGG + chr5.2:65245819-65245838 MS.gene063586:intron 20.0%
! AATAATAGTACTACGCATTT+AGG + chr5.2:65245413-65245432 MS.gene063586:CDS 25.0%
! ATAAGGAATCATGAAGAAAA+AGG + chr5.2:65245191-65245210 MS.gene063586:CDS 25.0%
! CAATGCAAATAAAAGGATAT+GGG - chr5.2:65245668-65245687 None:intergenic 25.0%
! GTTGGATATATAAAAGGATT+TGG + chr5.2:65245083-65245102 MS.gene063586:CDS 25.0%
! TCTTGTTCGAATAGAAAATA+TGG + chr5.2:65245155-65245174 MS.gene063586:CDS 25.0%
! TGCAAAGTTGGATATATAAA+AGG + chr5.2:65245077-65245096 MS.gene063586:CDS 25.0%
AGATTGCAATAGATTCTCAA+TGG - chr5.2:65245126-65245145 None:intergenic 30.0%
GAATAGAAAATATGGTTGCA+GGG + chr5.2:65245163-65245182 MS.gene063586:CDS 30.0%
GCAATGCAAATAAAAGGATA+TGG - chr5.2:65245669-65245688 None:intergenic 30.0%
GGATATATAAAAGGATTTGG+AGG + chr5.2:65245086-65245105 MS.gene063586:CDS 30.0%
GTCTGAACTATTAACCTTAA+TGG - chr5.2:65245890-65245909 None:intergenic 30.0%
TAAGGTTAATAGTTCAGACA+TGG + chr5.2:65245891-65245910 MS.gene063586:CDS 30.0%
TTAGAAAATCTCCGTGTTTA+TGG - chr5.2:65245295-65245314 None:intergenic 30.0%
TTGGATGTTATAATCTGCAA+GGG - chr5.2:65246013-65246032 None:intergenic 30.0%
TTGTTATGGTAAATCATTCG+TGG + chr5.2:65245322-65245341 MS.gene063586:CDS 30.0%
! CAGATGGAACTATTTGTTAA+AGG + chr5.2:65245844-65245863 MS.gene063586:intron 30.0%
! CATAACTTGTGTAACCTTAA+CGG + chr5.2:65245637-65245656 MS.gene063586:CDS 30.0%
CGAATAGAAAATATGGTTGC+AGG + chr5.2:65245162-65245181 MS.gene063586:CDS 35.0%
CTATTGTGAATAGTGTCCAA+CGG + chr5.2:65245537-65245556 MS.gene063586:CDS 35.0%
CTTGCAGATTATAACATCCA+AGG + chr5.2:65246012-65246031 MS.gene063586:CDS 35.0%
CTTGGATGTTATAATCTGCA+AGG - chr5.2:65246014-65246033 None:intergenic 35.0%
GAGCTCATTGTGATTCTATT+TGG + chr5.2:65245584-65245603 MS.gene063586:CDS 35.0%
GATCATTTGAGCCATAAACA+CGG + chr5.2:65245281-65245300 MS.gene063586:CDS 35.0%
GCAATCAATATTTGCAGCTT+TGG + chr5.2:65245440-65245459 MS.gene063586:CDS 35.0%
TACTCAGACCAATAAGCATT+TGG - chr5.2:65245467-65245486 None:intergenic 35.0%
TATTGTGAATAGTGTCCAAC+GGG + chr5.2:65245538-65245557 MS.gene063586:CDS 35.0%
TGCAAATAAAAGGATATGGG+AGG - chr5.2:65245665-65245684 None:intergenic 35.0%
! CTATTTGTTAAAGGCCTAGA+TGG + chr5.2:65245853-65245872 MS.gene063586:CDS 35.0%
! GTTTTCCTCTTGAAGAACAA+CGG - chr5.2:65245372-65245391 None:intergenic 35.0%
!!! GATTTTCTAAAGTAACCCGT+TGG - chr5.2:65245556-65245575 None:intergenic 35.0%
AACAAAGCCACAACCTGAAA+GGG - chr5.2:65245240-65245259 None:intergenic 40.0%
AATGGAAATTGTGGAGCAGA+TGG + chr5.2:65245828-65245847 MS.gene063586:intron 40.0%
ATGGTTGCAGGGAGAAAATA+AGG + chr5.2:65245174-65245193 MS.gene063586:CDS 40.0%
CTTTGCTGGTAAACAACTAG+AGG + chr5.2:65245978-65245997 MS.gene063586:CDS 40.0%
GCTTTGGTCCAAATGCTTAT+TGG + chr5.2:65245456-65245475 MS.gene063586:CDS 40.0%
GTTCTTCAAGAGGAAAACGA+TGG + chr5.2:65245374-65245393 MS.gene063586:CDS 40.0%
TCTCAATGGCAAACTGCTTA+GGG - chr5.2:65245112-65245131 None:intergenic 40.0%
TGAAACCGTTGTTCTTCAAG+AGG + chr5.2:65245364-65245383 MS.gene063586:CDS 40.0%
TGTTATAATCTGCAAGGGTC+CGG - chr5.2:65246008-65246027 None:intergenic 40.0%
TTCTCAATGGCAAACTGCTT+AGG - chr5.2:65245113-65245132 None:intergenic 40.0%
AACCAACGTCTGATCTTTGC+TGG + chr5.2:65245964-65245983 MS.gene063586:CDS 45.0%
ACAAAGCCACAACCTGAAAG+GGG - chr5.2:65245239-65245258 None:intergenic 45.0%
CAACAAAGCCACAACCTGAA+AGG - chr5.2:65245241-65245260 None:intergenic 45.0%
CCATATTACTGTCCCCTTTC+AGG + chr5.2:65245224-65245243 MS.gene063586:CDS 45.0%
CCTGAAAGGGGACAGTAATA+TGG - chr5.2:65245227-65245246 None:intergenic 45.0%
GTAAACAACTAGAGGACGAC+CGG + chr5.2:65245986-65246005 MS.gene063586:CDS 45.0%
TACCAGCAAAGATCAGACGT+TGG - chr5.2:65245969-65245988 None:intergenic 45.0%
TGGAGAGACGATGACCATTA+AGG + chr5.2:65245873-65245892 MS.gene063586:CDS 45.0%
! CAAAGATCAGACGTTGGTTG+TGG - chr5.2:65245963-65245982 None:intergenic 45.0%
TGGTCATCGTCTCTCCATCT+AGG - chr5.2:65245870-65245889 None:intergenic 50.0%
! ATCAGACGTTGGTTGTGGAC+TGG - chr5.2:65245958-65245977 None:intergenic 50.0%
! TCAGACGTTGGTTGTGGACT+GGG - chr5.2:65245957-65245976 None:intergenic 50.0%
!! GGATATGGGAGGTACCGTTA+AGG - chr5.2:65245654-65245673 None:intergenic 50.0%
!! TACTGTCCCCTTTCAGGTTG+TGG + chr5.2:65245230-65245249 MS.gene063586:CDS 50.0%
CGTGGATGGTTGACGAACCT+TGG - chr5.2:65246032-65246051 None:intergenic 55.0%
ACGTCCTCCTCCGCCTCCTT+GGG + chr5.2:65246049-65246068 MS.gene063586:CDS 65.0%
AGTCCCCAAGGAGGCGGAGG+AGG - chr5.2:65246056-65246075 None:intergenic 70.0%
CAAGGAGGCGGAGGAGGACG+TGG - chr5.2:65246050-65246069 None:intergenic 70.0%
CACGTCCTCCTCCGCCTCCT+TGG + chr5.2:65246048-65246067 MS.gene063586:CDS 70.0%
CGTCCTCCTCCGCCTCCTTG+GGG + chr5.2:65246050-65246069 MS.gene063586:CDS 70.0%
GAGGCGGAGGAGGACGTGGA+TGG - chr5.2:65246046-65246065 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 65245068 65246077 65245068 ID=MS.gene063586
chr5.2 mRNA 65245068 65246077 65245068 ID=MS.gene063586.t1;Parent=MS.gene063586
chr5.2 exon 65245068 65245658 65245068 ID=MS.gene063586.t1.exon1;Parent=MS.gene063586.t1
chr5.2 CDS 65245068 65245658 65245068 ID=cds.MS.gene063586.t1;Parent=MS.gene063586.t1
chr5.2 exon 65245847 65246077 65245847 ID=MS.gene063586.t1.exon2;Parent=MS.gene063586.t1
chr5.2 CDS 65245847 65246077 65245847 ID=cds.MS.gene063586.t1;Parent=MS.gene063586.t1
Gene Sequence

>MS.gene063586

ATGTATGGTTGCAAAGTTGGATATATAAAAGGATTTGGAGGCCCTAAGCAGTTTGCCATTGAGAATCTATTGCAATCTATCGAAATGTCTTGTTCGAATAGAAAATATGGTTGCAGGGAGAAAATAAGGAATCATGAAGAAAAAGGCATCTATAAGCCATATTACTGTCCCCTTTCAGGTTGTGGCTTTGTTGCATCATCTAAAGTGTTGTCTGATCATTTGAGCCATAAACACGGAGATTTTCTAATCAAATTTTGTTATGGTAAATCATTCGTGGTCTCTTTGAAGTCTAATGATGAAACCGTTGTTCTTCAAGAGGAAAACGATGGCAAACAATTTATTCTGAATAATAGTACTACGCATTTAGGAAATGCAATCAATATTTGCAGCTTTGGTCCAAATGCTTATTGGTCTGAGTATAGTTATGATATATTGGCAACGTCTCAGAAATGCAAAGTGAAATTACACTCTATTGTGAATAGTGTCCAACGGGTTACTTTAGAAAATCTTTCATCAGAGCTCATTGTGATTCTATTTGGTTCTTCTAAATATCTCGAGCTAGAAATTTGCATAACTTGTGTAACCTTAACGGTACCTCCCATATCCTTTTATTTGCATTGCTTATTTTCCTATTAAAGTCTTATTATTTTATCTTATGTTCTGAATTTATAATCTAACATTTAATCTCAAATTCACTAGTTCTTTTCTATTTTTTGATCAGTTCTTGAAATATCAGTCATAAATTTTCTTTTATTGATATAATGGAAATTGTGGAGCAGATGGAACTATTTGTTAAAGGCCTAGATGGAGAGACGATGACCATTAAGGTTAATAGTTCAGACATGGTAGTCAATCTGAAAGAGAAGATTCTTTACATGACTGCGATCCCAGTCCACAACCAACGTCTGATCTTTGCTGGTAAACAACTAGAGGACGACCGGACCCTTGCAGATTATAACATCCAAGGTTCGTCAACCATCCACGTCCTCCTCCGCCTCCTTGGGGACTAG

Protein sequence

>MS.gene063586.t1

MYGCKVGYIKGFGGPKQFAIENLLQSIEMSCSNRKYGCREKIRNHEEKGIYKPYYCPLSGCGFVASSKVLSDHLSHKHGDFLIKFCYGKSFVVSLKSNDETVVLQEENDGKQFILNNSTTHLGNAINICSFGPNAYWSEYSYDILATSQKCKVKLHSIVNSVQRVTLENLSSELIVILFGSSKYLELEICITCVTLTMELFVKGLDGETMTIKVNSSDMVVNLKEKILYMTAIPVHNQRLIFAGKQLEDDRTLADYNIQGSSTIHVLLRLLGD