AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene037087


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037087.t1 MTR_2g038420 85.672 335 46 1 1 333 1 335 0.0 586
MS.gene037087.t1 MTR_2g038430 71.429 343 88 1 1 333 1 343 1.44e-177 495
MS.gene037087.t1 MTR_5g076720 65.964 332 113 0 2 333 59 390 1.64e-152 434
MS.gene037087.t1 MTR_5g067400 65.397 315 106 1 18 332 4 315 2.69e-147 417
MS.gene037087.t1 MTR_7g024290 66.562 317 102 2 18 333 4 317 7.42e-144 409
MS.gene037087.t1 MTR_5g061290 61.585 328 121 3 9 333 2 327 3.04e-143 408
MS.gene037087.t1 MTR_1g046640 63.608 316 111 2 18 333 4 315 7.37e-142 404
MS.gene037087.t1 MTR_1g046650 61.920 323 119 2 11 333 28 346 5.67e-138 395
MS.gene037087.t1 MTR_1g046650 62.461 317 115 2 17 333 3 315 8.37e-138 394
MS.gene037087.t1 MTR_5g076660 61.145 332 123 2 2 330 10 338 7.07e-136 390
MS.gene037087.t1 MTR_7g094390 59.036 332 133 1 2 333 149 477 4.74e-135 392
MS.gene037087.t1 MTR_5g076370 59.159 333 129 3 2 330 10 339 2.66e-130 375
MS.gene037087.t1 MTR_5g076520 59.875 319 125 2 18 333 4 322 2.73e-129 372
MS.gene037087.t1 MTR_1g046650 62.245 294 107 2 40 333 26 315 2.34e-125 362
MS.gene037087.t1 MTR_5g076810 64.576 271 92 2 63 332 2 269 1.12e-121 351
MS.gene037087.t1 MTR_5g076505 59.044 293 120 0 41 333 23 315 2.74e-119 347
MS.gene037087.t1 MTR_5g076820 61.091 275 104 3 18 291 13 285 4.74e-112 327
MS.gene037087.t1 MTR_1g046650 60.400 250 95 2 84 333 1 246 3.60e-102 300
MS.gene037087.t1 MTR_5g076540 62.667 225 84 0 18 242 4 228 9.28e-96 284
MS.gene037087.t1 MTR_5g077020 61.202 183 62 4 88 268 45 220 1.79e-66 209
MS.gene037087.t1 MTR_4g094468 44.664 253 131 4 6 251 74 324 2.54e-66 212
MS.gene037087.t1 MTR_4g058025 72.566 113 30 1 95 206 14 126 7.15e-51 167
MS.gene037087.t1 MTR_7g085590 31.401 207 127 3 20 222 58 253 1.40e-29 115
MS.gene037087.t1 MTR_5g061310 57.143 77 33 0 257 333 1 77 9.61e-22 87.8
MS.gene037087.t1 MTR_1g054335 31.138 167 109 4 25 185 58 224 5.53e-21 92.0
MS.gene037087.t1 MTR_8g038370 30.481 187 123 5 5 185 93 278 1.11e-19 89.0
MS.gene037087.t1 MTR_3g091510 29.944 177 118 4 15 185 50 226 2.40e-19 87.4
MS.gene037087.t1 MTR_7g105080 60.000 75 30 0 258 332 1 75 2.65e-19 82.8
MS.gene037087.t1 MTR_3g092130 60.000 75 30 0 258 332 1 75 2.65e-19 82.8
MS.gene037087.t1 MTR_1g059690 60.000 75 30 0 258 332 1 75 2.65e-19 82.8
MS.gene037087.t1 MTR_3g017590 28.492 179 120 5 13 185 43 219 2.66e-19 87.0
MS.gene037087.t1 MTR_3g092130 60.000 75 30 0 258 332 1 75 4.38e-19 82.8
MS.gene037087.t1 MTR_5g092700 60.000 75 30 0 258 332 1 75 4.74e-19 82.8
MS.gene037087.t1 MTR_4g073580 60.000 75 30 0 258 332 1 75 4.74e-19 82.8
MS.gene037087.t1 MTR_7g093600 29.940 167 111 4 25 185 59 225 5.18e-19 86.3
MS.gene037087.t1 MTR_8g088060 60.000 75 30 0 258 332 1 75 8.36e-19 82.4
MS.gene037087.t1 MTR_5g033960 60.000 75 30 0 258 332 1 75 9.64e-19 82.0
MS.gene037087.t1 MTR_4g073580 60.000 75 30 0 258 332 1 75 1.39e-18 82.4
MS.gene037087.t1 MTR_1g008120 29.379 177 119 4 15 185 58 234 3.24e-18 84.3
MS.gene037087.t1 MTR_4g088485 60.000 75 30 0 258 332 1 75 5.52e-18 81.6
MS.gene037087.t1 MTR_4g088485 60.000 75 30 0 258 332 138 212 5.52e-18 81.6
MS.gene037087.t1 MTR_4g088485 49.333 75 23 1 258 332 77 136 8.73e-11 61.2
MS.gene037087.t1 MTR_1g066390 60.000 75 30 0 258 332 1 75 6.63e-18 82.0
MS.gene037087.t1 MTR_1g066390 60.000 75 30 0 258 332 77 151 6.63e-18 82.0
MS.gene037087.t1 MTR_1g066390 60.000 75 30 0 258 332 153 227 6.63e-18 82.0
MS.gene037087.t1 MTR_7g116360 60.000 75 30 0 258 332 1 75 6.82e-18 81.6
MS.gene037087.t1 MTR_7g116360 60.000 75 30 0 258 332 77 151 6.82e-18 81.6
MS.gene037087.t1 MTR_7g116360 60.000 75 30 0 258 332 153 227 6.82e-18 81.6
MS.gene037087.t1 MTR_8g027520 30.263 152 103 2 6 154 34 185 6.93e-18 83.2
MS.gene037087.t1 MTR_8g027520 30.263 152 103 2 6 154 25 176 7.59e-18 83.2
MS.gene037087.t1 MTR_7g116360 60.000 75 30 0 258 332 49 123 1.35e-17 82.0
MS.gene037087.t1 MTR_7g116360 60.000 75 30 0 258 332 125 199 1.35e-17 82.0
MS.gene037087.t1 MTR_7g116360 60.000 75 30 0 258 332 201 275 1.35e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 1 75 1.40e-17 81.6
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 77 151 1.40e-17 81.6
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 153 227 1.40e-17 81.6
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 1 75 1.42e-17 81.6
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 77 151 1.42e-17 81.6
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 153 227 1.42e-17 81.6
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 1 75 1.74e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 77 151 1.74e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 153 227 1.74e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 229 303 1.74e-17 82.0
MS.gene037087.t1 MTR_6g061930 60.000 75 30 0 258 332 1 75 1.90e-17 81.6
MS.gene037087.t1 MTR_6g061930 60.000 75 30 0 258 332 77 151 1.90e-17 81.6
MS.gene037087.t1 MTR_6g061930 60.000 75 30 0 258 332 214 288 1.90e-17 81.6
MS.gene037087.t1 MTR_6g061930 49.333 75 23 1 258 332 153 212 4.27e-11 63.2
MS.gene037087.t1 MTR_4g080920 58.667 75 31 0 258 332 77 151 2.28e-17 80.5
MS.gene037087.t1 MTR_4g080920 58.667 75 31 0 258 332 1 75 4.80e-17 79.3
MS.gene037087.t1 MTR_4g080920 48.000 75 39 0 258 332 153 227 3.44e-12 65.5
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 1 75 3.55e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 77 151 3.55e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 153 227 3.55e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 229 303 3.55e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 305 379 3.55e-17 82.0
MS.gene037087.t1 MTR_8g081020 60.000 75 30 0 258 332 1 75 3.62e-17 82.0
MS.gene037087.t1 MTR_8g081020 60.000 75 30 0 258 332 77 151 3.62e-17 82.0
MS.gene037087.t1 MTR_8g081020 60.000 75 30 0 258 332 153 227 3.62e-17 82.0
MS.gene037087.t1 MTR_8g081020 60.000 75 30 0 258 332 229 303 3.62e-17 82.0
MS.gene037087.t1 MTR_8g081020 60.000 75 30 0 258 332 305 379 3.62e-17 82.0
MS.gene037087.t1 MTR_4g080797 60.000 75 30 0 258 332 1 75 3.73e-17 82.0
MS.gene037087.t1 MTR_4g080797 60.000 75 30 0 258 332 77 151 3.73e-17 82.0
MS.gene037087.t1 MTR_4g080797 60.000 75 30 0 258 332 153 227 3.73e-17 82.0
MS.gene037087.t1 MTR_4g080797 60.000 75 30 0 258 332 229 303 3.73e-17 82.0
MS.gene037087.t1 MTR_4g080797 60.000 75 30 0 258 332 305 379 3.73e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 1 75 3.73e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 77 151 3.73e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 153 227 3.73e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 229 303 3.73e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 305 379 3.73e-17 82.0
MS.gene037087.t1 MTR_4g091580 60.000 75 30 0 258 332 1 75 4.02e-17 81.6
MS.gene037087.t1 MTR_4g091580 60.000 75 30 0 258 332 77 151 4.02e-17 81.6
MS.gene037087.t1 MTR_4g091580 60.000 75 30 0 258 332 153 227 4.02e-17 81.6
MS.gene037087.t1 MTR_4g091580 60.000 75 30 0 258 332 305 379 4.02e-17 81.6
MS.gene037087.t1 MTR_4g091580 58.667 75 31 0 258 332 229 303 1.27e-16 80.5
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 1 75 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 77 151 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 153 227 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 229 303 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 305 379 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 381 455 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 1 75 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 77 151 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 153 227 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 229 303 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 305 379 5.52e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 381 455 5.52e-17 82.0
MS.gene037087.t1 MTR_4g091580 58.667 75 31 0 258 332 305 379 5.82e-17 82.0
MS.gene037087.t1 MTR_4g091580 60.000 75 30 0 258 332 1 75 6.32e-17 82.0
MS.gene037087.t1 MTR_4g091580 60.000 75 30 0 258 332 77 151 6.32e-17 82.0
MS.gene037087.t1 MTR_4g091580 60.000 75 30 0 258 332 153 227 6.32e-17 82.0
MS.gene037087.t1 MTR_4g091580 60.000 75 30 0 258 332 229 303 6.32e-17 82.0
MS.gene037087.t1 MTR_4g091580 60.000 75 30 0 258 332 381 455 6.32e-17 82.0
MS.gene037087.t1 MTR_4g091580 60.000 75 30 0 258 332 457 531 6.32e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 1 75 6.09e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 77 151 6.09e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 153 227 6.09e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 229 303 6.09e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 305 379 6.09e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 381 455 6.09e-17 82.0
MS.gene037087.t1 MTR_4g081010 60.000 75 30 0 258 332 457 531 6.09e-17 82.0
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 1 75 6.62e-17 81.6
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 77 151 6.62e-17 81.6
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 153 227 6.62e-17 81.6
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 229 303 6.62e-17 81.6
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 305 379 6.62e-17 81.6
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 381 455 6.62e-17 81.6
MS.gene037087.t1 MTR_8g018230 60.000 75 30 0 258 332 457 531 6.62e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 77 151 8.97e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 153 227 8.97e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 229 303 8.97e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 305 379 8.97e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 381 455 8.97e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 457 531 8.97e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 533 607 8.97e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 609 683 8.97e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 685 759 8.97e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 761 835 8.97e-17 81.6
MS.gene037087.t1 MTR_4g088495 60.000 75 30 0 258 332 1 75 1.19e-16 81.3
MS.gene037087.t1 MTR_7g117415 30.556 144 97 2 14 154 50 193 3.42e-16 78.6
MS.gene037087.t1 MTR_8g479250 55.422 83 37 0 250 332 133 215 3.41e-15 75.5
MS.gene037087.t1 MTR_4g009980 56.452 62 27 0 272 333 10 71 1.61e-14 68.2
MS.gene037087.t1 MTR_5g076350 45.455 77 41 1 258 333 8 84 5.72e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037087.t1 AT5G37930 34.615 234 149 2 22 251 107 340 2.21e-44 155
MS.gene037087.t1 AT5G37890 33.083 266 163 6 5 266 30 284 2.73e-40 143
MS.gene037087.t1 AT5G37870 32.500 240 155 5 5 239 24 261 1.83e-39 140
MS.gene037087.t1 AT5G37910 30.682 264 168 5 5 262 15 269 6.13e-34 126
MS.gene037087.t1 AT1G66620 31.915 235 151 3 25 251 41 274 4.33e-33 125
MS.gene037087.t1 AT1G66650 31.907 257 160 7 17 260 75 329 2.68e-32 123
MS.gene037087.t1 AT1G66660 30.350 257 165 7 8 252 86 340 1.26e-31 121
MS.gene037087.t1 AT1G66630 31.429 245 160 5 1 238 23 266 9.56e-31 118
MS.gene037087.t1 AT5G62800 35.294 204 124 5 8 204 23 225 3.36e-29 115
MS.gene037087.t1 AT5G62800 35.294 204 124 5 8 204 23 225 3.65e-29 114
MS.gene037087.t1 AT3G52590 60.000 75 30 0 258 332 1 75 3.30e-19 82.8
MS.gene037087.t1 AT2G36170 60.000 75 30 0 258 332 1 75 3.30e-19 82.8
MS.gene037087.t1 AT1G23410 60.000 75 30 0 258 332 1 75 6.04e-19 82.8
MS.gene037087.t1 AT2G47110 60.000 75 30 0 258 332 1 75 7.20e-19 82.8
MS.gene037087.t1 AT2G47110 60.000 75 30 0 258 332 1 75 7.20e-19 82.8
MS.gene037087.t1 AT3G62250 60.000 75 30 0 258 332 1 75 7.43e-19 82.8
MS.gene037087.t1 AT2G35635 60.000 75 30 0 258 332 1 75 8.12e-19 82.4
MS.gene037087.t1 AT1G31340 60.000 75 30 0 258 332 1 75 9.34e-19 82.4
MS.gene037087.t1 AT1G31340 45.205 73 40 0 260 332 79 151 6.19e-11 60.5
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 1 75 1.29e-18 82.0
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 77 151 1.29e-18 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 1 75 1.29e-18 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 77 151 1.29e-18 82.0
MS.gene037087.t1 AT3G61790 29.762 168 112 4 24 185 59 226 7.04e-18 83.6
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 1 75 7.14e-18 81.6
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 77 151 7.14e-18 81.6
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 153 227 7.14e-18 81.6
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 1 75 7.14e-18 81.6
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 77 151 7.14e-18 81.6
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 153 227 7.14e-18 81.6
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 1 75 7.14e-18 81.6
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 77 151 7.14e-18 81.6
MS.gene037087.t1 AT4G05050 60.000 75 30 0 258 332 153 227 7.14e-18 81.6
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 1 75 7.14e-18 81.6
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 77 151 7.14e-18 81.6
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 153 227 7.14e-18 81.6
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 1 75 7.14e-18 81.6
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 77 151 7.14e-18 81.6
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 153 227 7.14e-18 81.6
MS.gene037087.t1 AT4G27880 32.836 134 87 2 24 154 60 193 7.69e-18 83.2
MS.gene037087.t1 AT3G58040 31.343 134 89 2 24 154 56 189 1.07e-17 80.9
MS.gene037087.t1 AT3G58040 29.167 168 113 4 24 185 56 223 1.68e-17 82.0
MS.gene037087.t1 AT3G58040 29.167 168 113 4 24 185 56 223 1.68e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 1 75 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 77 151 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 153 227 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 229 303 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 1 75 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 77 151 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 153 227 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 229 303 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 1 75 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 77 151 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 153 227 1.88e-17 82.0
MS.gene037087.t1 AT5G03240 60.000 75 30 0 258 332 229 303 1.88e-17 82.0
MS.gene037087.t1 AT5G20620 60.000 75 30 0 258 332 1 75 1.88e-17 82.0
MS.gene037087.t1 AT5G20620 60.000 75 30 0 258 332 77 151 1.88e-17 82.0
MS.gene037087.t1 AT5G20620 60.000 75 30 0 258 332 153 227 1.88e-17 82.0
MS.gene037087.t1 AT5G20620 60.000 75 30 0 258 332 229 303 1.88e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 1 75 1.89e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 77 151 1.89e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 153 227 1.89e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 229 303 1.89e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 1 75 1.89e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 77 151 1.89e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 153 227 1.89e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 229 303 1.89e-17 82.0
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 1 75 1.89e-17 82.0
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 77 151 1.89e-17 82.0
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 153 227 1.89e-17 82.0
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 229 303 1.89e-17 82.0
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 1 75 1.89e-17 82.0
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 77 151 1.89e-17 82.0
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 153 227 1.89e-17 82.0
MS.gene037087.t1 AT4G02890 60.000 75 30 0 258 332 229 303 1.89e-17 82.0
MS.gene037087.t1 AT1G65350 60.000 75 30 0 258 332 1 75 2.44e-17 81.6
MS.gene037087.t1 AT1G65350 60.000 75 30 0 258 332 152 226 2.51e-17 81.6
MS.gene037087.t1 AT1G65350 60.000 75 29 1 258 332 77 150 4.68e-16 78.2
MS.gene037087.t1 AT1G65350 47.191 89 33 1 258 332 228 316 2.14e-11 64.3
MS.gene037087.t1 AT1G55060 58.667 75 31 0 258 332 77 151 2.52e-17 80.1
MS.gene037087.t1 AT1G55060 57.333 75 32 0 258 332 153 227 1.62e-15 75.1
MS.gene037087.t1 AT1G55060 50.667 75 37 0 258 332 1 75 5.56e-13 67.8
MS.gene037087.t1 AT5G20620 60.000 75 30 0 258 332 1 75 3.89e-17 82.0
MS.gene037087.t1 AT5G20620 60.000 75 30 0 258 332 77 151 3.89e-17 82.0
MS.gene037087.t1 AT5G20620 60.000 75 30 0 258 332 153 227 3.89e-17 82.0
MS.gene037087.t1 AT5G20620 60.000 75 30 0 258 332 229 303 3.89e-17 82.0
MS.gene037087.t1 AT5G20620 60.000 75 30 0 258 332 305 379 3.89e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 1 75 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 77 151 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 153 227 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 229 303 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 305 379 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 1 75 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 77 151 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 153 227 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 229 303 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 305 379 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 1 75 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 77 151 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 153 227 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 229 303 3.90e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 305 379 3.90e-17 82.0
MS.gene037087.t1 AT2G41980 27.749 191 129 5 4 185 30 220 4.44e-17 80.9
MS.gene037087.t1 AT5G37640 60.000 75 30 0 258 332 79 153 5.45e-17 80.9
MS.gene037087.t1 AT5G37640 57.333 75 32 0 258 332 155 229 3.93e-15 75.5
MS.gene037087.t1 AT5G37640 56.579 76 32 1 258 332 231 306 3.90e-13 69.7
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 1 75 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 77 151 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 153 227 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 229 303 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 305 379 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 381 455 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 1 75 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 77 151 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 153 227 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 229 303 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 305 379 5.78e-17 82.0
MS.gene037087.t1 AT4G05320 60.000 75 30 0 258 332 381 455 5.78e-17 82.0
MS.gene037087.t1 AT1G66660 27.228 202 133 7 71 260 25 224 6.54e-17 79.0
MS.gene037087.t1 AT3G09790 58.667 75 31 0 258 332 79 153 3.40e-15 77.0
MS.gene037087.t1 AT3G09790 50.667 75 37 0 258 332 3 77 2.14e-13 71.2
MS.gene037087.t1 AT3G09790 58.667 75 31 0 258 332 79 153 3.40e-15 77.0
MS.gene037087.t1 AT3G09790 50.667 75 37 0 258 332 3 77 2.14e-13 71.2
MS.gene037087.t1 AT5G37900 24.904 261 144 8 8 255 17 238 2.81e-14 72.0
MS.gene037087.t1 AT1G53930 50.000 74 37 0 257 330 85 158 4.45e-14 69.3
MS.gene037087.t1 AT1G53950 45.333 75 41 0 254 328 65 139 1.01e-12 65.5
MS.gene037087.t1 AT1G66610 28.571 161 108 4 92 247 185 343 3.26e-12 67.0
MS.gene037087.t1 AT1G66610 47.619 63 33 0 25 87 53 115 8.25e-12 65.9
MS.gene037087.t1 AT1G66610 38.824 85 52 0 17 101 150 234 5.83e-12 65.1
MS.gene037087.t1 AT1G66610 47.619 63 33 0 25 87 53 115 9.49e-12 64.3

Find 58 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAGCATTCCAATCTTTC+AGG 0.147128 2.1:-52116414 MS.gene037087:intron
ACCTCGTCCTCCGTCTCCTT+GGG 0.244581 2.1:-52114418 MS.gene037087:CDS
CACCTCGTCCTCCGTCTCCT+TGG 0.309571 2.1:-52114419 MS.gene037087:CDS
GCAGTCAATATTTGCTGCTT+TGG 0.310101 2.1:-52115064 MS.gene037087:CDS
AACAAAGTCACAACCTGAAA+TGG 0.344214 2.1:+52115267 None:intergenic
CCTTGTGTCTATTGCTGAAA+TGG 0.349847 2.1:+52115221 None:intergenic
AATGTCCAACAAGTTACTTT+AGG 0.360422 2.1:-52114956 MS.gene037087:CDS
GTTGAAATTCAGTGTGATAA+TGG 0.363000 2.1:-52115505 MS.gene037087:intron
TCTACCTGCTGTTCTAAGCT+TGG 0.390487 2.1:-52115469 MS.gene037087:CDS
AGAGGTTCAGAAGTACCATT+TGG 0.398954 2.1:+52114905 None:intergenic
GAAATACATACCTGAAAGAT+TGG 0.409594 2.1:+52116404 None:intergenic
ACAAAGTCACAACCTGAAAT+GGG 0.411143 2.1:+52115268 None:intergenic
CTACCTGCTGTTCTAAGCTT+GGG 0.413153 2.1:-52115468 MS.gene037087:CDS
TTGAATGTTGTTGTCGGCAG+CGG 0.419266 2.1:+52114457 None:intergenic
GGAGACGGAGGACGAGGTGG+AGG 0.419949 2.1:+52114423 None:intergenic
CACTCGGACTCAGAAGCATT+TGG 0.429441 2.1:+52115040 None:intergenic
ATCAATCGTTGGTCCTGCAC+TGG 0.429975 2.1:+52114512 None:intergenic
GGCATCATCATCAGACTTCA+AGG 0.452451 2.1:+52115156 None:intergenic
GCAGCCTTTGCTGAATCAAC+AGG 0.461637 2.1:+52116509 None:intergenic
GAGTTCCTAAAGTAACTTGT+TGG 0.474215 2.1:+52114951 None:intergenic
GTTCTTCAAGAGAAATATGA+TGG 0.478667 2.1:-52115130 MS.gene037087:CDS
TTGAAATTCAGTGTGATAAT+GGG 0.484997 2.1:-52115504 MS.gene037087:intron
TGCAACAATCGAACACTTGA+GGG 0.491667 2.1:+52116450 None:intergenic
AAGTACCATTTGGAATCATA+AGG 0.493915 2.1:+52114915 None:intergenic
CCCCAAGGAGACGGAGGACG+AGG 0.516928 2.1:+52114417 None:intergenic
GTTCCCAAGCTTAGAACAGC+AGG 0.520048 2.1:+52115465 None:intergenic
GAGTTCCTTATGATTCCAAA+TGG 0.523125 2.1:-52114920 MS.gene037087:CDS
ATGCAAATTTCTAACTTCAG+AGG 0.541031 2.1:+52114887 None:intergenic
GTAGTTATCGTATAATGTCT+AGG 0.546651 2.1:-52115018 MS.gene037087:CDS
TTTGGAATCATAAGGAACTC+TGG 0.556758 2.1:+52114923 None:intergenic
ACAATCGAACACTTGAGGGT+TGG 0.558312 2.1:+52116454 None:intergenic
ATGCAACAATCGAACACTTG+AGG 0.564771 2.1:+52116449 None:intergenic
ATATTTCTCTTGAAGAACAA+TGG 0.570732 2.1:+52115135 None:intergenic
CATTATACGATAACTACACT+CGG 0.571786 2.1:+52115024 None:intergenic
CAAGAAAACGTACCCAGTGC+AGG 0.574122 2.1:-52114525 MS.gene037087:CDS
AAGCGAATAGCAATCCATCC+AGG 0.574503 2.1:+52114600 None:intergenic
TCAATCGTTGGTCCTGCACT+GGG 0.578821 2.1:+52114513 None:intergenic
GCAGATGCAAATCTTCGTAA+AGG 0.578928 2.1:-52114624 MS.gene037087:intron
GTGTCTATTGCTGAAATGGT+TGG 0.578962 2.1:+52115225 None:intergenic
TAATCTAGTCCCCAAGGAGA+CGG 0.582861 2.1:+52114408 None:intergenic
CCTCGTCCTCCGTCTCCTTG+GGG 0.587981 2.1:-52114417 MS.gene037087:CDS
GACCAACGATTGATCTTACA+AGG 0.588367 2.1:-52114503 MS.gene037087:CDS
GCAAATCTTCGTAAAGGACC+TGG 0.597281 2.1:-52114618 MS.gene037087:CDS
GAGACGGAGGACGAGGTGGA+GGG 0.597965 2.1:+52114424 None:intergenic
AGACACGATATTCAGTGTGA+AGG 0.605397 2.1:-52114561 MS.gene037087:CDS
CATAACTTGCACAAACCCCA+TGG 0.605834 2.1:-52114867 MS.gene037087:intron
CAAGGAGACGGAGGACGAGG+TGG 0.606116 2.1:+52114420 None:intergenic
CCATTTCAGCAATAGACACA+AGG 0.609968 2.1:-52115221 MS.gene037087:CDS
ATCTTCGTAAAGGACCTGGA+TGG 0.631403 2.1:-52114614 MS.gene037087:CDS
GTGGTGTAATCTAGTCCCCA+AGG 0.634280 2.1:+52114402 None:intergenic
ATATTGCAATAGATTCTCAA+AGG 0.643202 2.1:+52115396 None:intergenic
CAAAGTCACAACCTGAAATG+GGG 0.646418 2.1:+52115269 None:intergenic
GTTGGACAACACTTCTGATG+AGG 0.646668 2.1:+52115243 None:intergenic
GGAGCCTGTTGATTCAGCAA+AGG 0.648540 2.1:-52116513 MS.gene037087:CDS
TACCTTGTAAGATCAATCGT+TGG 0.651509 2.1:+52114501 None:intergenic
TCTAGTCCCCAAGGAGACGG+AGG 0.655762 2.1:+52114411 None:intergenic
AACGATTGATCTTACAAGGT+AGG 0.656712 2.1:-52114499 MS.gene037087:CDS
GTTGGAAATCATCATAGACA+CGG 0.709386 2.1:+52116472 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAAAAAAACAAGAAAA+GGG + chr2.1:52114554-52114573 None:intergenic 15.0%
!! ACATAAATGACTAAAAAAAT+TGG - chr2.1:52114989-52115008 MS.gene037087:CDS 15.0%
!! TAAACAAAAAAAACAAGAAA+AGG + chr2.1:52114555-52114574 None:intergenic 15.0%
!!! AATAATAGTACTATGTTTTT+GGG - chr2.1:52115836-52115855 MS.gene037087:intron 15.0%
!!! ATTTATGTATAAGTATTTTG+TGG + chr2.1:52114977-52114996 None:intergenic 15.0%
!!! GACTTATTTTAATCATTTTA+GGG - chr2.1:52114727-52114746 MS.gene037087:intron 15.0%
!!! GTTTTCTATTTTACTATTTT+TGG - chr2.1:52116221-52116240 MS.gene037087:intron 15.0%
!!! TGACTTATTTTAATCATTTT+AGG - chr2.1:52114726-52114745 MS.gene037087:intron 15.0%
!! CTATAGTATAATAAAGTAAG+AGG + chr2.1:52115364-52115383 None:intergenic 20.0%
!! TGAACTTTGATTATTAATCA+TGG - chr2.1:52115207-52115226 MS.gene037087:CDS 20.0%
!! TGAGATGATTATATTTATGA+TGG - chr2.1:52115293-52115312 MS.gene037087:CDS 20.0%
!!! ATAATAGTACTATGTTTTTG+GGG - chr2.1:52115837-52115856 MS.gene037087:intron 20.0%
!!! CAATAATAGTACTATGTTTT+TGG - chr2.1:52115835-52115854 MS.gene037087:intron 20.0%
!!! GCAAATAGTGATTTTATTTA+AGG - chr2.1:52114673-52114692 MS.gene037087:intron 20.0%
! AATAAATCAAGGCAAAGAAA+AGG + chr2.1:52116098-52116117 None:intergenic 25.0%
! ATATTGCAATAGATTCTCAA+AGG + chr2.1:52115534-52115553 None:intergenic 25.0%
! ATATTTCTCTTGAAGAACAA+TGG + chr2.1:52115795-52115814 None:intergenic 25.0%
! CTCTAATAGGAAATAAATCA+AGG + chr2.1:52116109-52116128 None:intergenic 25.0%
! GAGAATAATAAGACTCTAAT+AGG + chr2.1:52116122-52116141 None:intergenic 25.0%
! GATGATGAATAAGTTATAAG+TGG - chr2.1:52114648-52114667 MS.gene037087:intron 25.0%
! TAGGTAAAATCCTAGTAAAA+TGG + chr2.1:52115086-52115105 None:intergenic 25.0%
! TTGAAATTCAGTGTGATAAT+GGG - chr2.1:52115423-52115442 MS.gene037087:CDS 25.0%
!! ACTAGGATTTTACCTATATT+GGG - chr2.1:52115090-52115109 MS.gene037087:CDS 25.0%
!! AGTCTCAAACTTTCTTTTAT+TGG - chr2.1:52116262-52116281 MS.gene037087:intron 25.0%
!! TACTAGGATTTTACCTATAT+TGG - chr2.1:52115089-52115108 MS.gene037087:CDS 25.0%
!! TGTTTAAAATGCCAAAACTA+AGG - chr2.1:52116190-52116209 MS.gene037087:intron 25.0%
!!! CTATAAAAGAGTATCATTCA+AGG + chr2.1:52114615-52114634 None:intergenic 25.0%
!!! CTGAATTTTAGGATTAAAGT+CGG - chr2.1:52115161-52115180 MS.gene037087:CDS 25.0%
!!! TATTGGTTTAATGTCAATTG+TGG - chr2.1:52116279-52116298 MS.gene037087:intron 25.0%
ATGCAAATTTCTAACTTCAG+AGG + chr2.1:52116043-52116062 None:intergenic 30.0%
CATTATACGATAACTACACT+CGG + chr2.1:52115906-52115925 None:intergenic 30.0%
CGACTTTAATCCTAAAATTC+AGG + chr2.1:52115163-52115182 None:intergenic 30.0%
GAAATACATACCTGAAAGAT+TGG + chr2.1:52114526-52114545 None:intergenic 30.0%
GAATGAAAAATATGGTTGCA+GGG - chr2.1:52115571-52115590 MS.gene037087:intron 30.0%
GTAGTTATCGTATAATGTCT+AGG - chr2.1:52115909-52115928 MS.gene037087:intron 30.0%
GTTCTTCAAGAGAAATATGA+TGG - chr2.1:52115797-52115816 MS.gene037087:intron 30.0%
GTTGAAATTCAGTGTGATAA+TGG - chr2.1:52115422-52115441 MS.gene037087:CDS 30.0%
! AACGCTAAAAACCTTAGTTT+TGG + chr2.1:52116204-52116223 None:intergenic 30.0%
! AAGTACCATTTGGAATCATA+AGG + chr2.1:52116015-52116034 None:intergenic 30.0%
! AATGTCCAACAAGTTACTTT+AGG - chr2.1:52115971-52115990 MS.gene037087:intron 30.0%
! ACAAAATCGCAGGATTTTAA+AGG + chr2.1:52115032-52115051 None:intergenic 30.0%
! CAAAATCGCAGGATTTTAAA+GGG + chr2.1:52115031-52115050 None:intergenic 30.0%
! CTGCAACCATATTTTTCATT+CGG + chr2.1:52115572-52115591 None:intergenic 30.0%
! TAAAATCCTGCGATTTTGTA+TGG - chr2.1:52115033-52115052 MS.gene037087:CDS 30.0%
! TGCAACCATATTTTTCATTC+GGG + chr2.1:52115571-52115590 None:intergenic 30.0%
! TTGCATTACAACTAGTGTTT+TGG - chr2.1:52115250-52115269 MS.gene037087:CDS 30.0%
!! AAAATCGCAGGATTTTAAAG+GGG + chr2.1:52115030-52115049 None:intergenic 30.0%
!!! GATTTTGAAGCCATTTTACT+AGG - chr2.1:52115073-52115092 MS.gene037087:CDS 30.0%
AACAAAGTCACAACCTGAAA+TGG + chr2.1:52115663-52115682 None:intergenic 35.0%
AACGATTGATCTTACAAGGT+AGG - chr2.1:52116428-52116447 MS.gene037087:CDS 35.0%
ACAAAGTCACAACCTGAAAT+GGG + chr2.1:52115662-52115681 None:intergenic 35.0%
ATCATGGTGTAGATATCACA+AGG - chr2.1:52115223-52115242 MS.gene037087:CDS 35.0%
CGAATGAAAAATATGGTTGC+AGG - chr2.1:52115570-52115589 MS.gene037087:intron 35.0%
CTTAAGCATTCCAATCTTTC+AGG - chr2.1:52114513-52114532 MS.gene037087:CDS 35.0%
GAGTTCCTTATGATTCCAAA+TGG - chr2.1:52116007-52116026 MS.gene037087:intron 35.0%
GCAATTCATCTCAAATCCTT+CGG - chr2.1:52116167-52116186 MS.gene037087:intron 35.0%
GTTGGAAATCATCATAGACA+CGG + chr2.1:52114458-52114477 None:intergenic 35.0%
TACCTTGTAAGATCAATCGT+TGG + chr2.1:52116429-52116448 None:intergenic 35.0%
TGAAATCCATACAAAATCGC+AGG + chr2.1:52115042-52115061 None:intergenic 35.0%
! CAAAATCGAGATTTTGCTTC+AGG - chr2.1:52114778-52114797 MS.gene037087:intron 35.0%
! GAGTTCCTAAAGTAACTTGT+TGG + chr2.1:52115979-52115998 None:intergenic 35.0%
! GTCGCAAAATCCTGAATTTT+AGG - chr2.1:52115150-52115169 MS.gene037087:CDS 35.0%
! TTTGGAATCATAAGGAACTC+TGG + chr2.1:52116007-52116026 None:intergenic 35.0%
! TTTGGCATTTTAAACACCGA+AGG + chr2.1:52116186-52116205 None:intergenic 35.0%
!! CGCTTTTTGAATGTTGTTGT+CGG + chr2.1:52116479-52116498 None:intergenic 35.0%
AAAGGAGATAGGCATTACCA+TGG + chr2.1:52116080-52116099 None:intergenic 40.0%
AAGGAGATAGGCATTACCAT+GGG + chr2.1:52116079-52116098 None:intergenic 40.0%
AGACACGATATTCAGTGTGA+AGG - chr2.1:52116366-52116385 MS.gene037087:intron 40.0%
ATGCAACAATCGAACACTTG+AGG + chr2.1:52114481-52114500 None:intergenic 40.0%
CAAAGTCACAACCTGAAATG+GGG + chr2.1:52115661-52115680 None:intergenic 40.0%
CAAGGCAAAGAAAAGGAGAT+AGG + chr2.1:52116091-52116110 None:intergenic 40.0%
CCATAGCAGAATCCCAATAT+AGG + chr2.1:52115105-52115124 None:intergenic 40.0%
CCATGCCCGAATGAAAAATA+TGG - chr2.1:52115563-52115582 MS.gene037087:intron 40.0%
CCATTTCAGCAATAGACACA+AGG - chr2.1:52115706-52115725 MS.gene037087:intron 40.0%
CCTATATTGGGATTCTGCTA+TGG - chr2.1:52115102-52115121 MS.gene037087:CDS 40.0%
CCTTGTGTCTATTGCTGAAA+TGG + chr2.1:52115709-52115728 None:intergenic 40.0%
CTATGGATTTGAGTCGTTGA+AGG - chr2.1:52115119-52115138 MS.gene037087:CDS 40.0%
GACCAACGATTGATCTTACA+AGG - chr2.1:52116424-52116443 MS.gene037087:CDS 40.0%
GCAGATGCAAATCTTCGTAA+AGG - chr2.1:52116303-52116322 MS.gene037087:intron 40.0%
GTGTCTATTGCTGAAATGGT+TGG + chr2.1:52115705-52115724 None:intergenic 40.0%
TGCAACAATCGAACACTTGA+GGG + chr2.1:52114480-52114499 None:intergenic 40.0%
TTCGATTTCGATCTTCCCTT+TGG + chr2.1:52114805-52114824 None:intergenic 40.0%
! AGATTTTGCTTCAGGTCCAA+AGG - chr2.1:52114786-52114805 MS.gene037087:intron 40.0%
! CCATATTTTTCATTCGGGCA+TGG + chr2.1:52115566-52115585 None:intergenic 40.0%
! GATTTTGCTTCAGGTCCAAA+GGG - chr2.1:52114787-52114806 MS.gene037087:intron 40.0%
! GCAGTCAATATTTGCTGCTT+TGG - chr2.1:52115863-52115882 MS.gene037087:intron 40.0%
!! AGAGGTTCAGAAGTACCATT+TGG + chr2.1:52116025-52116044 None:intergenic 40.0%
!! AGGATTTTAAAGGGGTTCGA+AGG + chr2.1:52115022-52115041 None:intergenic 40.0%
!! AGTCGGCATTTTGACAACAA+CGG - chr2.1:52115178-52115197 MS.gene037087:CDS 40.0%
AAGCGAATAGCAATCCATCC+AGG + chr2.1:52116330-52116349 None:intergenic 45.0%
ACAATCGAACACTTGAGGGT+TGG + chr2.1:52114476-52114495 None:intergenic 45.0%
AGGAGATAGGCATTACCATG+GGG + chr2.1:52116078-52116097 None:intergenic 45.0%
ATCTTCGTAAAGGACCTGGA+TGG - chr2.1:52116313-52116332 MS.gene037087:intron 45.0%
CCTGAAATGGGGCAAAAACA+TGG + chr2.1:52115650-52115669 None:intergenic 45.0%
GCAAATCTTCGTAAAGGACC+TGG - chr2.1:52116309-52116328 MS.gene037087:intron 45.0%
GGCATCATCATCAGACTTCA+AGG + chr2.1:52115774-52115793 None:intergenic 45.0%
GTTGGACAACACTTCTGATG+AGG + chr2.1:52115687-52115706 None:intergenic 45.0%
TTGAATGTTGTTGTCGGCAG+CGG + chr2.1:52116473-52116492 None:intergenic 45.0%
! CATAACTTGCACAAACCCCA+TGG - chr2.1:52116060-52116079 MS.gene037087:intron 45.0%
! CTACCTGCTGTTCTAAGCTT+GGG - chr2.1:52115459-52115478 MS.gene037087:CDS 45.0%
! TCTACCTGCTGTTCTAAGCT+TGG - chr2.1:52115458-52115477 MS.gene037087:CDS 45.0%
!! CCATGTTTTTGCCCCATTTC+AGG - chr2.1:52115647-52115666 MS.gene037087:intron 45.0%
ATCAATCGTTGGTCCTGCAC+TGG + chr2.1:52116418-52116437 None:intergenic 50.0%
CAAGAAAACGTACCCAGTGC+AGG - chr2.1:52116402-52116421 MS.gene037087:intron 50.0%
GCAGCCTTTGCTGAATCAAC+AGG + chr2.1:52114421-52114440 None:intergenic 50.0%
GTTCCCAAGCTTAGAACAGC+AGG + chr2.1:52115465-52115484 None:intergenic 50.0%
TCAATCGTTGGTCCTGCACT+GGG + chr2.1:52116417-52116436 None:intergenic 50.0%
!! CACTCGGACTCAGAAGCATT+TGG + chr2.1:52115890-52115909 None:intergenic 50.0%
!! GGAGCCTGTTGATTCAGCAA+AGG - chr2.1:52114414-52114433 MS.gene037087:CDS 50.0%
ACCTCGTCCTCCGTCTCCTT+GGG - chr2.1:52116509-52116528 MS.gene037087:CDS 60.0%
CAAGGAGACGGAGGACGAGG+TGG + chr2.1:52116510-52116529 None:intergenic 65.0%
CACCTCGTCCTCCGTCTCCT+TGG - chr2.1:52116508-52116527 MS.gene037087:CDS 65.0%
CCTCGTCCTCCGTCTCCTTG+GGG - chr2.1:52116510-52116529 MS.gene037087:CDS 65.0%
GAGACGGAGGACGAGGTGGA+GGG + chr2.1:52116506-52116525 None:intergenic 65.0%
CCCCAAGGAGACGGAGGACG+AGG + chr2.1:52116513-52116532 None:intergenic 70.0%
GGAGACGGAGGACGAGGTGG+AGG + chr2.1:52116507-52116526 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 52114412 52116537 52114412 ID=MS.gene037087
chr2.1 mRNA 52114412 52116537 52114412 ID=MS.gene037087.t1;Parent=MS.gene037087
chr2.1 exon 52116415 52116537 52116415 ID=MS.gene037087.t1.exon1;Parent=MS.gene037087.t1
chr2.1 CDS 52116415 52116537 52116415 ID=cds.MS.gene037087.t1;Parent=MS.gene037087.t1
chr2.1 exon 52114868 52115515 52114868 ID=MS.gene037087.t1.exon2;Parent=MS.gene037087.t1
chr2.1 CDS 52114868 52115515 52114868 ID=cds.MS.gene037087.t1;Parent=MS.gene037087.t1
chr2.1 exon 52114412 52114642 52114412 ID=MS.gene037087.t1.exon3;Parent=MS.gene037087.t1
chr2.1 CDS 52114412 52114642 52114412 ID=cds.MS.gene037087.t1;Parent=MS.gene037087.t1
Gene Sequence

>MS.gene037087

ATGGAGCCTGTTGATTCAGCAAAGGCTGCTAGTAAGAATAACTCCGTGTCTATGATGATTTCCAACCCTCAAGTGTTCGATTGTTGCATTTGTTTTCAACTCTTAAGCATTCCAATCTTTCAGGTATGTATTTCAATGACCCTTTTCTTGTTTTTTTTGTTTAAGCTGTTTTCTAAGTATGAGAAGAGTCTTTTTCTTGTCCTTGAATGATACTCTTTTATAGTGATCATGATGATGATGATGAATAAGTTATAAGTGGTTGCAAATAGTGATTTTATTTAAGGAATCACTTTTATTGATTTTAAATGCTTAGATGACTTATTTTAATCATTTTAGGGTTTGAATACTTGTAACAATCAACGTTGTCAAAATCGAGATTTTGCTTCAGGTCCAAAGGGAAGATCGAAATCGAAAATCGTAAAATCGCAATCAAAATCGAAAGATTTTACTCAACTACTTTTGTAGAATCGATATAAGAAATCTTAAAAGCACAATCAAAATCTATGAATATAATGCTTAATATATGTTATAAATTGTATATAGAAATGACTCAGTTTAAAGTCCACAAAATACTTATACATAAATGACTAAAAAAATTGGACAAAATCCTTCGAACCCCTTTAAAATCCTGCGATTTTGTATGGATTTCACAATTTTTTGCGATTTTGAAGCCATTTTACTAGGATTTTACCTATATTGGGATTCTGCTATGGATTTGAGTCGTTGAAGGTGAATAAAGTCGCAAAATCCTGAATTTTAGGATTAAAGTCGGCATTTTGACAACAACGGTAACAATGAACTTTGATTATTAATCATGGTGTAGATATCACAAGGCTACTTGCATTACAACTAGTGTTTTGGCGACTTGCTAAGAAAATAATTGAGATGATTATATTTATGATGGTTATACTTTTGTTTGCATAACATATCAACAAGACTTACAAAGAAACCTCTTACTTTATTATACTATAGCAAATGTTTCAAAGTCTAATTTGATGTTTTACATTTATGTTGAAATTCAGTGTGATAATGGGCATATTGTTTGCTCTACCTGCTGTTCTAAGCTTGGGAACAAGTGTGACAAGTGCTCAAATTGCATTAGCTTAAAACGTTGTAGAGCCTTTGAGAATCTATTGCAATATATCAAAATGCCATGCCCGAATGAAAAATATGGTTGCAGGGAGACAATAGATTACACTCAGAAGACGAAGCATGAAGAAGAATGCATCTATGTGCCATGTTTTTGCCCCATTTCAGGTTGTGACTTTGTTGCCTCATCAGAAGTGTTGTCCAACCATTTCAGCAATAGACACAAGGATTCTCAAATCAAATTTTCTTATGATCAATCTTTCGTTGTCTCCTTGAAGTCTGATGATGATGCCATTGTTCTTCAAGAGAAATATGATGGCAAACTATTTATTCTCAATAATAGTACTATGTTTTTGGGGAATGCAGTCAATATTTGCTGCTTTGGTCCAAATGCTTCTGAGTCCGAGTGTAGTTATCGTATAATGTCTAGGTCTCAGAGATGCAAACTGAAATTACACTCTTTTGTAACGAATGTCCAACAAGTTACTTTAGGAACTCTTTCACCAGAGTTCCTTATGATTCCAAATGGTACTTCTGAACCTCTGAAGTTAGAAATTTGCATAACTTGCACAAACCCCATGGTAATGCCTATCTCCTTTTCTTTGCCTTGATTTATTTCCTATTAGAGTCTTATTATTCTCTTTTATGTTTTGAATTAATACTCTAGCAATTCATCTCAAATCCTTCGGTGTTTAAAATGCCAAAACTAAGGTTTTTAGCGTTTTCTATTTTACTATTTTTGGATCAGTTCTTGAAATATTAGTCTCAAACTTTCTTTTATTGGTTTAATGTCAATTGTGGTGCAGATGCAAATCTTCGTAAAGGACCTGGATGGATTGCTATTCGCTTTGAATGTTAAGAGTTTAGACACGATATTCAGTGTGAAGGAGCAGATTTTTGACAAGAAAACGTACCCAGTGCAGGACCAACGATTGATCTTACAAGGTAGGCAACTACATGACAGCACGACCGCTGCCGACAACAACATTCAAAAAGCGTCAACCCTCCACCTCGTCCTCCGTCTCCTTGGGGACTAG

Protein sequence

>MS.gene037087.t1

MEPVDSAKAASKNNSVSMMISNPQVFDCCICFQLLSIPIFQCDNGHIVCSTCCSKLGNKCDKCSNCISLKRCRAFENLLQYIKMPCPNEKYGCRETIDYTQKTKHEEECIYVPCFCPISGCDFVASSEVLSNHFSNRHKDSQIKFSYDQSFVVSLKSDDDAIVLQEKYDGKLFILNNSTMFLGNAVNICCFGPNASESECSYRIMSRSQRCKLKLHSFVTNVQQVTLGTLSPEFLMIPNGTSEPLKLEICITCTNPMMQIFVKDLDGLLFALNVKSLDTIFSVKEQIFDKKTYPVQDQRLILQGRQLHDSTTAADNNIQKASTLHLVLRLLGD