Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037087.t1 | AES65367.2 | 85.7 | 335 | 46 | 1 | 1 | 333 | 1 | 335 | 7.00E-164 | 586.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037087.t1 | Q84K34 | 33.7 | 249 | 161 | 2 | 7 | 251 | 92 | 340 | 1.2e-39 | 165.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037087.t1 | G7IIC4 | 85.7 | 335 | 46 | 1 | 1 | 333 | 1 | 335 | 5.1e-164 | 586.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037087.t1 | MTR_2g038420 | 85.672 | 335 | 46 | 1 | 1 | 333 | 1 | 335 | 0.0 | 586 |
MS.gene037087.t1 | MTR_2g038430 | 71.429 | 343 | 88 | 1 | 1 | 333 | 1 | 343 | 1.44e-177 | 495 |
MS.gene037087.t1 | MTR_5g076720 | 65.964 | 332 | 113 | 0 | 2 | 333 | 59 | 390 | 1.64e-152 | 434 |
MS.gene037087.t1 | MTR_5g067400 | 65.397 | 315 | 106 | 1 | 18 | 332 | 4 | 315 | 2.69e-147 | 417 |
MS.gene037087.t1 | MTR_7g024290 | 66.562 | 317 | 102 | 2 | 18 | 333 | 4 | 317 | 7.42e-144 | 409 |
MS.gene037087.t1 | MTR_5g061290 | 61.585 | 328 | 121 | 3 | 9 | 333 | 2 | 327 | 3.04e-143 | 408 |
MS.gene037087.t1 | MTR_1g046640 | 63.608 | 316 | 111 | 2 | 18 | 333 | 4 | 315 | 7.37e-142 | 404 |
MS.gene037087.t1 | MTR_1g046650 | 61.920 | 323 | 119 | 2 | 11 | 333 | 28 | 346 | 5.67e-138 | 395 |
MS.gene037087.t1 | MTR_1g046650 | 62.461 | 317 | 115 | 2 | 17 | 333 | 3 | 315 | 8.37e-138 | 394 |
MS.gene037087.t1 | MTR_5g076660 | 61.145 | 332 | 123 | 2 | 2 | 330 | 10 | 338 | 7.07e-136 | 390 |
MS.gene037087.t1 | MTR_7g094390 | 59.036 | 332 | 133 | 1 | 2 | 333 | 149 | 477 | 4.74e-135 | 392 |
MS.gene037087.t1 | MTR_5g076370 | 59.159 | 333 | 129 | 3 | 2 | 330 | 10 | 339 | 2.66e-130 | 375 |
MS.gene037087.t1 | MTR_5g076520 | 59.875 | 319 | 125 | 2 | 18 | 333 | 4 | 322 | 2.73e-129 | 372 |
MS.gene037087.t1 | MTR_1g046650 | 62.245 | 294 | 107 | 2 | 40 | 333 | 26 | 315 | 2.34e-125 | 362 |
MS.gene037087.t1 | MTR_5g076810 | 64.576 | 271 | 92 | 2 | 63 | 332 | 2 | 269 | 1.12e-121 | 351 |
MS.gene037087.t1 | MTR_5g076505 | 59.044 | 293 | 120 | 0 | 41 | 333 | 23 | 315 | 2.74e-119 | 347 |
MS.gene037087.t1 | MTR_5g076820 | 61.091 | 275 | 104 | 3 | 18 | 291 | 13 | 285 | 4.74e-112 | 327 |
MS.gene037087.t1 | MTR_1g046650 | 60.400 | 250 | 95 | 2 | 84 | 333 | 1 | 246 | 3.60e-102 | 300 |
MS.gene037087.t1 | MTR_5g076540 | 62.667 | 225 | 84 | 0 | 18 | 242 | 4 | 228 | 9.28e-96 | 284 |
MS.gene037087.t1 | MTR_5g077020 | 61.202 | 183 | 62 | 4 | 88 | 268 | 45 | 220 | 1.79e-66 | 209 |
MS.gene037087.t1 | MTR_4g094468 | 44.664 | 253 | 131 | 4 | 6 | 251 | 74 | 324 | 2.54e-66 | 212 |
MS.gene037087.t1 | MTR_4g058025 | 72.566 | 113 | 30 | 1 | 95 | 206 | 14 | 126 | 7.15e-51 | 167 |
MS.gene037087.t1 | MTR_7g085590 | 31.401 | 207 | 127 | 3 | 20 | 222 | 58 | 253 | 1.40e-29 | 115 |
MS.gene037087.t1 | MTR_5g061310 | 57.143 | 77 | 33 | 0 | 257 | 333 | 1 | 77 | 9.61e-22 | 87.8 |
MS.gene037087.t1 | MTR_1g054335 | 31.138 | 167 | 109 | 4 | 25 | 185 | 58 | 224 | 5.53e-21 | 92.0 |
MS.gene037087.t1 | MTR_8g038370 | 30.481 | 187 | 123 | 5 | 5 | 185 | 93 | 278 | 1.11e-19 | 89.0 |
MS.gene037087.t1 | MTR_3g091510 | 29.944 | 177 | 118 | 4 | 15 | 185 | 50 | 226 | 2.40e-19 | 87.4 |
MS.gene037087.t1 | MTR_7g105080 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 2.65e-19 | 82.8 |
MS.gene037087.t1 | MTR_3g092130 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 2.65e-19 | 82.8 |
MS.gene037087.t1 | MTR_1g059690 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 2.65e-19 | 82.8 |
MS.gene037087.t1 | MTR_3g017590 | 28.492 | 179 | 120 | 5 | 13 | 185 | 43 | 219 | 2.66e-19 | 87.0 |
MS.gene037087.t1 | MTR_3g092130 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 4.38e-19 | 82.8 |
MS.gene037087.t1 | MTR_5g092700 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 4.74e-19 | 82.8 |
MS.gene037087.t1 | MTR_4g073580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 4.74e-19 | 82.8 |
MS.gene037087.t1 | MTR_7g093600 | 29.940 | 167 | 111 | 4 | 25 | 185 | 59 | 225 | 5.18e-19 | 86.3 |
MS.gene037087.t1 | MTR_8g088060 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 8.36e-19 | 82.4 |
MS.gene037087.t1 | MTR_5g033960 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 9.64e-19 | 82.0 |
MS.gene037087.t1 | MTR_4g073580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.39e-18 | 82.4 |
MS.gene037087.t1 | MTR_1g008120 | 29.379 | 177 | 119 | 4 | 15 | 185 | 58 | 234 | 3.24e-18 | 84.3 |
MS.gene037087.t1 | MTR_4g088485 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 5.52e-18 | 81.6 |
MS.gene037087.t1 | MTR_4g088485 | 60.000 | 75 | 30 | 0 | 258 | 332 | 138 | 212 | 5.52e-18 | 81.6 |
MS.gene037087.t1 | MTR_4g088485 | 49.333 | 75 | 23 | 1 | 258 | 332 | 77 | 136 | 8.73e-11 | 61.2 |
MS.gene037087.t1 | MTR_1g066390 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 6.63e-18 | 82.0 |
MS.gene037087.t1 | MTR_1g066390 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 6.63e-18 | 82.0 |
MS.gene037087.t1 | MTR_1g066390 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 6.63e-18 | 82.0 |
MS.gene037087.t1 | MTR_7g116360 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 6.82e-18 | 81.6 |
MS.gene037087.t1 | MTR_7g116360 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 6.82e-18 | 81.6 |
MS.gene037087.t1 | MTR_7g116360 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 6.82e-18 | 81.6 |
MS.gene037087.t1 | MTR_8g027520 | 30.263 | 152 | 103 | 2 | 6 | 154 | 34 | 185 | 6.93e-18 | 83.2 |
MS.gene037087.t1 | MTR_8g027520 | 30.263 | 152 | 103 | 2 | 6 | 154 | 25 | 176 | 7.59e-18 | 83.2 |
MS.gene037087.t1 | MTR_7g116360 | 60.000 | 75 | 30 | 0 | 258 | 332 | 49 | 123 | 1.35e-17 | 82.0 |
MS.gene037087.t1 | MTR_7g116360 | 60.000 | 75 | 30 | 0 | 258 | 332 | 125 | 199 | 1.35e-17 | 82.0 |
MS.gene037087.t1 | MTR_7g116360 | 60.000 | 75 | 30 | 0 | 258 | 332 | 201 | 275 | 1.35e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.40e-17 | 81.6 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.40e-17 | 81.6 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.40e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.42e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.42e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.42e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.74e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.74e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.74e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 1.74e-17 | 82.0 |
MS.gene037087.t1 | MTR_6g061930 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.90e-17 | 81.6 |
MS.gene037087.t1 | MTR_6g061930 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.90e-17 | 81.6 |
MS.gene037087.t1 | MTR_6g061930 | 60.000 | 75 | 30 | 0 | 258 | 332 | 214 | 288 | 1.90e-17 | 81.6 |
MS.gene037087.t1 | MTR_6g061930 | 49.333 | 75 | 23 | 1 | 258 | 332 | 153 | 212 | 4.27e-11 | 63.2 |
MS.gene037087.t1 | MTR_4g080920 | 58.667 | 75 | 31 | 0 | 258 | 332 | 77 | 151 | 2.28e-17 | 80.5 |
MS.gene037087.t1 | MTR_4g080920 | 58.667 | 75 | 31 | 0 | 258 | 332 | 1 | 75 | 4.80e-17 | 79.3 |
MS.gene037087.t1 | MTR_4g080920 | 48.000 | 75 | 39 | 0 | 258 | 332 | 153 | 227 | 3.44e-12 | 65.5 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 3.55e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 3.55e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 3.55e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 3.55e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 3.55e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g081020 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 3.62e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g081020 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 3.62e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g081020 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 3.62e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g081020 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 3.62e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g081020 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 3.62e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g080797 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 3.73e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g080797 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 3.73e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g080797 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 3.73e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g080797 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 3.73e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g080797 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 3.73e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 3.73e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 3.73e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 3.73e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 3.73e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 3.73e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 4.02e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 4.02e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 4.02e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 4.02e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 258 | 332 | 229 | 303 | 1.27e-16 | 80.5 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 381 | 455 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 381 | 455 | 5.52e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g091580 | 58.667 | 75 | 31 | 0 | 258 | 332 | 305 | 379 | 5.82e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 6.32e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 6.32e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 6.32e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 6.32e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 381 | 455 | 6.32e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g091580 | 60.000 | 75 | 30 | 0 | 258 | 332 | 457 | 531 | 6.32e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 6.09e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 6.09e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 6.09e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 6.09e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 6.09e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 381 | 455 | 6.09e-17 | 82.0 |
MS.gene037087.t1 | MTR_4g081010 | 60.000 | 75 | 30 | 0 | 258 | 332 | 457 | 531 | 6.09e-17 | 82.0 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 6.62e-17 | 81.6 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 6.62e-17 | 81.6 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 6.62e-17 | 81.6 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 6.62e-17 | 81.6 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 6.62e-17 | 81.6 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 381 | 455 | 6.62e-17 | 81.6 |
MS.gene037087.t1 | MTR_8g018230 | 60.000 | 75 | 30 | 0 | 258 | 332 | 457 | 531 | 6.62e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 8.97e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 8.97e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 8.97e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 8.97e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 381 | 455 | 8.97e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 457 | 531 | 8.97e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 533 | 607 | 8.97e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 609 | 683 | 8.97e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 685 | 759 | 8.97e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 761 | 835 | 8.97e-17 | 81.6 |
MS.gene037087.t1 | MTR_4g088495 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.19e-16 | 81.3 |
MS.gene037087.t1 | MTR_7g117415 | 30.556 | 144 | 97 | 2 | 14 | 154 | 50 | 193 | 3.42e-16 | 78.6 |
MS.gene037087.t1 | MTR_8g479250 | 55.422 | 83 | 37 | 0 | 250 | 332 | 133 | 215 | 3.41e-15 | 75.5 |
MS.gene037087.t1 | MTR_4g009980 | 56.452 | 62 | 27 | 0 | 272 | 333 | 10 | 71 | 1.61e-14 | 68.2 |
MS.gene037087.t1 | MTR_5g076350 | 45.455 | 77 | 41 | 1 | 258 | 333 | 8 | 84 | 5.72e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037087.t1 | AT5G37930 | 34.615 | 234 | 149 | 2 | 22 | 251 | 107 | 340 | 2.21e-44 | 155 |
MS.gene037087.t1 | AT5G37890 | 33.083 | 266 | 163 | 6 | 5 | 266 | 30 | 284 | 2.73e-40 | 143 |
MS.gene037087.t1 | AT5G37870 | 32.500 | 240 | 155 | 5 | 5 | 239 | 24 | 261 | 1.83e-39 | 140 |
MS.gene037087.t1 | AT5G37910 | 30.682 | 264 | 168 | 5 | 5 | 262 | 15 | 269 | 6.13e-34 | 126 |
MS.gene037087.t1 | AT1G66620 | 31.915 | 235 | 151 | 3 | 25 | 251 | 41 | 274 | 4.33e-33 | 125 |
MS.gene037087.t1 | AT1G66650 | 31.907 | 257 | 160 | 7 | 17 | 260 | 75 | 329 | 2.68e-32 | 123 |
MS.gene037087.t1 | AT1G66660 | 30.350 | 257 | 165 | 7 | 8 | 252 | 86 | 340 | 1.26e-31 | 121 |
MS.gene037087.t1 | AT1G66630 | 31.429 | 245 | 160 | 5 | 1 | 238 | 23 | 266 | 9.56e-31 | 118 |
MS.gene037087.t1 | AT5G62800 | 35.294 | 204 | 124 | 5 | 8 | 204 | 23 | 225 | 3.36e-29 | 115 |
MS.gene037087.t1 | AT5G62800 | 35.294 | 204 | 124 | 5 | 8 | 204 | 23 | 225 | 3.65e-29 | 114 |
MS.gene037087.t1 | AT3G52590 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 3.30e-19 | 82.8 |
MS.gene037087.t1 | AT2G36170 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 3.30e-19 | 82.8 |
MS.gene037087.t1 | AT1G23410 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 6.04e-19 | 82.8 |
MS.gene037087.t1 | AT2G47110 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 7.20e-19 | 82.8 |
MS.gene037087.t1 | AT2G47110 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 7.20e-19 | 82.8 |
MS.gene037087.t1 | AT3G62250 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 7.43e-19 | 82.8 |
MS.gene037087.t1 | AT2G35635 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 8.12e-19 | 82.4 |
MS.gene037087.t1 | AT1G31340 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 9.34e-19 | 82.4 |
MS.gene037087.t1 | AT1G31340 | 45.205 | 73 | 40 | 0 | 260 | 332 | 79 | 151 | 6.19e-11 | 60.5 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.29e-18 | 82.0 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.29e-18 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.29e-18 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.29e-18 | 82.0 |
MS.gene037087.t1 | AT3G61790 | 29.762 | 168 | 112 | 4 | 24 | 185 | 59 | 226 | 7.04e-18 | 83.6 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G05050 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 7.14e-18 | 81.6 |
MS.gene037087.t1 | AT4G27880 | 32.836 | 134 | 87 | 2 | 24 | 154 | 60 | 193 | 7.69e-18 | 83.2 |
MS.gene037087.t1 | AT3G58040 | 31.343 | 134 | 89 | 2 | 24 | 154 | 56 | 189 | 1.07e-17 | 80.9 |
MS.gene037087.t1 | AT3G58040 | 29.167 | 168 | 113 | 4 | 24 | 185 | 56 | 223 | 1.68e-17 | 82.0 |
MS.gene037087.t1 | AT3G58040 | 29.167 | 168 | 113 | 4 | 24 | 185 | 56 | 223 | 1.68e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G03240 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G20620 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G20620 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G20620 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT5G20620 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 1.88e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G02890 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 1.89e-17 | 82.0 |
MS.gene037087.t1 | AT1G65350 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 2.44e-17 | 81.6 |
MS.gene037087.t1 | AT1G65350 | 60.000 | 75 | 30 | 0 | 258 | 332 | 152 | 226 | 2.51e-17 | 81.6 |
MS.gene037087.t1 | AT1G65350 | 60.000 | 75 | 29 | 1 | 258 | 332 | 77 | 150 | 4.68e-16 | 78.2 |
MS.gene037087.t1 | AT1G65350 | 47.191 | 89 | 33 | 1 | 258 | 332 | 228 | 316 | 2.14e-11 | 64.3 |
MS.gene037087.t1 | AT1G55060 | 58.667 | 75 | 31 | 0 | 258 | 332 | 77 | 151 | 2.52e-17 | 80.1 |
MS.gene037087.t1 | AT1G55060 | 57.333 | 75 | 32 | 0 | 258 | 332 | 153 | 227 | 1.62e-15 | 75.1 |
MS.gene037087.t1 | AT1G55060 | 50.667 | 75 | 37 | 0 | 258 | 332 | 1 | 75 | 5.56e-13 | 67.8 |
MS.gene037087.t1 | AT5G20620 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 3.89e-17 | 82.0 |
MS.gene037087.t1 | AT5G20620 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 3.89e-17 | 82.0 |
MS.gene037087.t1 | AT5G20620 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 3.89e-17 | 82.0 |
MS.gene037087.t1 | AT5G20620 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 3.89e-17 | 82.0 |
MS.gene037087.t1 | AT5G20620 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 3.89e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 3.90e-17 | 82.0 |
MS.gene037087.t1 | AT2G41980 | 27.749 | 191 | 129 | 5 | 4 | 185 | 30 | 220 | 4.44e-17 | 80.9 |
MS.gene037087.t1 | AT5G37640 | 60.000 | 75 | 30 | 0 | 258 | 332 | 79 | 153 | 5.45e-17 | 80.9 |
MS.gene037087.t1 | AT5G37640 | 57.333 | 75 | 32 | 0 | 258 | 332 | 155 | 229 | 3.93e-15 | 75.5 |
MS.gene037087.t1 | AT5G37640 | 56.579 | 76 | 32 | 1 | 258 | 332 | 231 | 306 | 3.90e-13 | 69.7 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 381 | 455 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 1 | 75 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 77 | 151 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 153 | 227 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 229 | 303 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 305 | 379 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT4G05320 | 60.000 | 75 | 30 | 0 | 258 | 332 | 381 | 455 | 5.78e-17 | 82.0 |
MS.gene037087.t1 | AT1G66660 | 27.228 | 202 | 133 | 7 | 71 | 260 | 25 | 224 | 6.54e-17 | 79.0 |
MS.gene037087.t1 | AT3G09790 | 58.667 | 75 | 31 | 0 | 258 | 332 | 79 | 153 | 3.40e-15 | 77.0 |
MS.gene037087.t1 | AT3G09790 | 50.667 | 75 | 37 | 0 | 258 | 332 | 3 | 77 | 2.14e-13 | 71.2 |
MS.gene037087.t1 | AT3G09790 | 58.667 | 75 | 31 | 0 | 258 | 332 | 79 | 153 | 3.40e-15 | 77.0 |
MS.gene037087.t1 | AT3G09790 | 50.667 | 75 | 37 | 0 | 258 | 332 | 3 | 77 | 2.14e-13 | 71.2 |
MS.gene037087.t1 | AT5G37900 | 24.904 | 261 | 144 | 8 | 8 | 255 | 17 | 238 | 2.81e-14 | 72.0 |
MS.gene037087.t1 | AT1G53930 | 50.000 | 74 | 37 | 0 | 257 | 330 | 85 | 158 | 4.45e-14 | 69.3 |
MS.gene037087.t1 | AT1G53950 | 45.333 | 75 | 41 | 0 | 254 | 328 | 65 | 139 | 1.01e-12 | 65.5 |
MS.gene037087.t1 | AT1G66610 | 28.571 | 161 | 108 | 4 | 92 | 247 | 185 | 343 | 3.26e-12 | 67.0 |
MS.gene037087.t1 | AT1G66610 | 47.619 | 63 | 33 | 0 | 25 | 87 | 53 | 115 | 8.25e-12 | 65.9 |
MS.gene037087.t1 | AT1G66610 | 38.824 | 85 | 52 | 0 | 17 | 101 | 150 | 234 | 5.83e-12 | 65.1 |
MS.gene037087.t1 | AT1G66610 | 47.619 | 63 | 33 | 0 | 25 | 87 | 53 | 115 | 9.49e-12 | 64.3 |
Find 58 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAAGCATTCCAATCTTTC+AGG | 0.147128 | 2.1:-52116414 | MS.gene037087:intron |
ACCTCGTCCTCCGTCTCCTT+GGG | 0.244581 | 2.1:-52114418 | MS.gene037087:CDS |
CACCTCGTCCTCCGTCTCCT+TGG | 0.309571 | 2.1:-52114419 | MS.gene037087:CDS |
GCAGTCAATATTTGCTGCTT+TGG | 0.310101 | 2.1:-52115064 | MS.gene037087:CDS |
AACAAAGTCACAACCTGAAA+TGG | 0.344214 | 2.1:+52115267 | None:intergenic |
CCTTGTGTCTATTGCTGAAA+TGG | 0.349847 | 2.1:+52115221 | None:intergenic |
AATGTCCAACAAGTTACTTT+AGG | 0.360422 | 2.1:-52114956 | MS.gene037087:CDS |
GTTGAAATTCAGTGTGATAA+TGG | 0.363000 | 2.1:-52115505 | MS.gene037087:intron |
TCTACCTGCTGTTCTAAGCT+TGG | 0.390487 | 2.1:-52115469 | MS.gene037087:CDS |
AGAGGTTCAGAAGTACCATT+TGG | 0.398954 | 2.1:+52114905 | None:intergenic |
GAAATACATACCTGAAAGAT+TGG | 0.409594 | 2.1:+52116404 | None:intergenic |
ACAAAGTCACAACCTGAAAT+GGG | 0.411143 | 2.1:+52115268 | None:intergenic |
CTACCTGCTGTTCTAAGCTT+GGG | 0.413153 | 2.1:-52115468 | MS.gene037087:CDS |
TTGAATGTTGTTGTCGGCAG+CGG | 0.419266 | 2.1:+52114457 | None:intergenic |
GGAGACGGAGGACGAGGTGG+AGG | 0.419949 | 2.1:+52114423 | None:intergenic |
CACTCGGACTCAGAAGCATT+TGG | 0.429441 | 2.1:+52115040 | None:intergenic |
ATCAATCGTTGGTCCTGCAC+TGG | 0.429975 | 2.1:+52114512 | None:intergenic |
GGCATCATCATCAGACTTCA+AGG | 0.452451 | 2.1:+52115156 | None:intergenic |
GCAGCCTTTGCTGAATCAAC+AGG | 0.461637 | 2.1:+52116509 | None:intergenic |
GAGTTCCTAAAGTAACTTGT+TGG | 0.474215 | 2.1:+52114951 | None:intergenic |
GTTCTTCAAGAGAAATATGA+TGG | 0.478667 | 2.1:-52115130 | MS.gene037087:CDS |
TTGAAATTCAGTGTGATAAT+GGG | 0.484997 | 2.1:-52115504 | MS.gene037087:intron |
TGCAACAATCGAACACTTGA+GGG | 0.491667 | 2.1:+52116450 | None:intergenic |
AAGTACCATTTGGAATCATA+AGG | 0.493915 | 2.1:+52114915 | None:intergenic |
CCCCAAGGAGACGGAGGACG+AGG | 0.516928 | 2.1:+52114417 | None:intergenic |
GTTCCCAAGCTTAGAACAGC+AGG | 0.520048 | 2.1:+52115465 | None:intergenic |
GAGTTCCTTATGATTCCAAA+TGG | 0.523125 | 2.1:-52114920 | MS.gene037087:CDS |
ATGCAAATTTCTAACTTCAG+AGG | 0.541031 | 2.1:+52114887 | None:intergenic |
GTAGTTATCGTATAATGTCT+AGG | 0.546651 | 2.1:-52115018 | MS.gene037087:CDS |
TTTGGAATCATAAGGAACTC+TGG | 0.556758 | 2.1:+52114923 | None:intergenic |
ACAATCGAACACTTGAGGGT+TGG | 0.558312 | 2.1:+52116454 | None:intergenic |
ATGCAACAATCGAACACTTG+AGG | 0.564771 | 2.1:+52116449 | None:intergenic |
ATATTTCTCTTGAAGAACAA+TGG | 0.570732 | 2.1:+52115135 | None:intergenic |
CATTATACGATAACTACACT+CGG | 0.571786 | 2.1:+52115024 | None:intergenic |
CAAGAAAACGTACCCAGTGC+AGG | 0.574122 | 2.1:-52114525 | MS.gene037087:CDS |
AAGCGAATAGCAATCCATCC+AGG | 0.574503 | 2.1:+52114600 | None:intergenic |
TCAATCGTTGGTCCTGCACT+GGG | 0.578821 | 2.1:+52114513 | None:intergenic |
GCAGATGCAAATCTTCGTAA+AGG | 0.578928 | 2.1:-52114624 | MS.gene037087:intron |
GTGTCTATTGCTGAAATGGT+TGG | 0.578962 | 2.1:+52115225 | None:intergenic |
TAATCTAGTCCCCAAGGAGA+CGG | 0.582861 | 2.1:+52114408 | None:intergenic |
CCTCGTCCTCCGTCTCCTTG+GGG | 0.587981 | 2.1:-52114417 | MS.gene037087:CDS |
GACCAACGATTGATCTTACA+AGG | 0.588367 | 2.1:-52114503 | MS.gene037087:CDS |
GCAAATCTTCGTAAAGGACC+TGG | 0.597281 | 2.1:-52114618 | MS.gene037087:CDS |
GAGACGGAGGACGAGGTGGA+GGG | 0.597965 | 2.1:+52114424 | None:intergenic |
AGACACGATATTCAGTGTGA+AGG | 0.605397 | 2.1:-52114561 | MS.gene037087:CDS |
CATAACTTGCACAAACCCCA+TGG | 0.605834 | 2.1:-52114867 | MS.gene037087:intron |
CAAGGAGACGGAGGACGAGG+TGG | 0.606116 | 2.1:+52114420 | None:intergenic |
CCATTTCAGCAATAGACACA+AGG | 0.609968 | 2.1:-52115221 | MS.gene037087:CDS |
ATCTTCGTAAAGGACCTGGA+TGG | 0.631403 | 2.1:-52114614 | MS.gene037087:CDS |
GTGGTGTAATCTAGTCCCCA+AGG | 0.634280 | 2.1:+52114402 | None:intergenic |
ATATTGCAATAGATTCTCAA+AGG | 0.643202 | 2.1:+52115396 | None:intergenic |
CAAAGTCACAACCTGAAATG+GGG | 0.646418 | 2.1:+52115269 | None:intergenic |
GTTGGACAACACTTCTGATG+AGG | 0.646668 | 2.1:+52115243 | None:intergenic |
GGAGCCTGTTGATTCAGCAA+AGG | 0.648540 | 2.1:-52116513 | MS.gene037087:CDS |
TACCTTGTAAGATCAATCGT+TGG | 0.651509 | 2.1:+52114501 | None:intergenic |
TCTAGTCCCCAAGGAGACGG+AGG | 0.655762 | 2.1:+52114411 | None:intergenic |
AACGATTGATCTTACAAGGT+AGG | 0.656712 | 2.1:-52114499 | MS.gene037087:CDS |
GTTGGAAATCATCATAGACA+CGG | 0.709386 | 2.1:+52116472 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACAAAAAAAACAAGAAAA+GGG | + | chr2.1:52114554-52114573 | None:intergenic | 15.0% |
!! | ACATAAATGACTAAAAAAAT+TGG | - | chr2.1:52114989-52115008 | MS.gene037087:CDS | 15.0% |
!! | TAAACAAAAAAAACAAGAAA+AGG | + | chr2.1:52114555-52114574 | None:intergenic | 15.0% |
!!! | AATAATAGTACTATGTTTTT+GGG | - | chr2.1:52115836-52115855 | MS.gene037087:intron | 15.0% |
!!! | ATTTATGTATAAGTATTTTG+TGG | + | chr2.1:52114977-52114996 | None:intergenic | 15.0% |
!!! | GACTTATTTTAATCATTTTA+GGG | - | chr2.1:52114727-52114746 | MS.gene037087:intron | 15.0% |
!!! | GTTTTCTATTTTACTATTTT+TGG | - | chr2.1:52116221-52116240 | MS.gene037087:intron | 15.0% |
!!! | TGACTTATTTTAATCATTTT+AGG | - | chr2.1:52114726-52114745 | MS.gene037087:intron | 15.0% |
!! | CTATAGTATAATAAAGTAAG+AGG | + | chr2.1:52115364-52115383 | None:intergenic | 20.0% |
!! | TGAACTTTGATTATTAATCA+TGG | - | chr2.1:52115207-52115226 | MS.gene037087:CDS | 20.0% |
!! | TGAGATGATTATATTTATGA+TGG | - | chr2.1:52115293-52115312 | MS.gene037087:CDS | 20.0% |
!!! | ATAATAGTACTATGTTTTTG+GGG | - | chr2.1:52115837-52115856 | MS.gene037087:intron | 20.0% |
!!! | CAATAATAGTACTATGTTTT+TGG | - | chr2.1:52115835-52115854 | MS.gene037087:intron | 20.0% |
!!! | GCAAATAGTGATTTTATTTA+AGG | - | chr2.1:52114673-52114692 | MS.gene037087:intron | 20.0% |
! | AATAAATCAAGGCAAAGAAA+AGG | + | chr2.1:52116098-52116117 | None:intergenic | 25.0% |
! | ATATTGCAATAGATTCTCAA+AGG | + | chr2.1:52115534-52115553 | None:intergenic | 25.0% |
! | ATATTTCTCTTGAAGAACAA+TGG | + | chr2.1:52115795-52115814 | None:intergenic | 25.0% |
! | CTCTAATAGGAAATAAATCA+AGG | + | chr2.1:52116109-52116128 | None:intergenic | 25.0% |
! | GAGAATAATAAGACTCTAAT+AGG | + | chr2.1:52116122-52116141 | None:intergenic | 25.0% |
! | GATGATGAATAAGTTATAAG+TGG | - | chr2.1:52114648-52114667 | MS.gene037087:intron | 25.0% |
! | TAGGTAAAATCCTAGTAAAA+TGG | + | chr2.1:52115086-52115105 | None:intergenic | 25.0% |
! | TTGAAATTCAGTGTGATAAT+GGG | - | chr2.1:52115423-52115442 | MS.gene037087:CDS | 25.0% |
!! | ACTAGGATTTTACCTATATT+GGG | - | chr2.1:52115090-52115109 | MS.gene037087:CDS | 25.0% |
!! | AGTCTCAAACTTTCTTTTAT+TGG | - | chr2.1:52116262-52116281 | MS.gene037087:intron | 25.0% |
!! | TACTAGGATTTTACCTATAT+TGG | - | chr2.1:52115089-52115108 | MS.gene037087:CDS | 25.0% |
!! | TGTTTAAAATGCCAAAACTA+AGG | - | chr2.1:52116190-52116209 | MS.gene037087:intron | 25.0% |
!!! | CTATAAAAGAGTATCATTCA+AGG | + | chr2.1:52114615-52114634 | None:intergenic | 25.0% |
!!! | CTGAATTTTAGGATTAAAGT+CGG | - | chr2.1:52115161-52115180 | MS.gene037087:CDS | 25.0% |
!!! | TATTGGTTTAATGTCAATTG+TGG | - | chr2.1:52116279-52116298 | MS.gene037087:intron | 25.0% |
ATGCAAATTTCTAACTTCAG+AGG | + | chr2.1:52116043-52116062 | None:intergenic | 30.0% | |
CATTATACGATAACTACACT+CGG | + | chr2.1:52115906-52115925 | None:intergenic | 30.0% | |
CGACTTTAATCCTAAAATTC+AGG | + | chr2.1:52115163-52115182 | None:intergenic | 30.0% | |
GAAATACATACCTGAAAGAT+TGG | + | chr2.1:52114526-52114545 | None:intergenic | 30.0% | |
GAATGAAAAATATGGTTGCA+GGG | - | chr2.1:52115571-52115590 | MS.gene037087:intron | 30.0% | |
GTAGTTATCGTATAATGTCT+AGG | - | chr2.1:52115909-52115928 | MS.gene037087:intron | 30.0% | |
GTTCTTCAAGAGAAATATGA+TGG | - | chr2.1:52115797-52115816 | MS.gene037087:intron | 30.0% | |
GTTGAAATTCAGTGTGATAA+TGG | - | chr2.1:52115422-52115441 | MS.gene037087:CDS | 30.0% | |
! | AACGCTAAAAACCTTAGTTT+TGG | + | chr2.1:52116204-52116223 | None:intergenic | 30.0% |
! | AAGTACCATTTGGAATCATA+AGG | + | chr2.1:52116015-52116034 | None:intergenic | 30.0% |
! | AATGTCCAACAAGTTACTTT+AGG | - | chr2.1:52115971-52115990 | MS.gene037087:intron | 30.0% |
! | ACAAAATCGCAGGATTTTAA+AGG | + | chr2.1:52115032-52115051 | None:intergenic | 30.0% |
! | CAAAATCGCAGGATTTTAAA+GGG | + | chr2.1:52115031-52115050 | None:intergenic | 30.0% |
! | CTGCAACCATATTTTTCATT+CGG | + | chr2.1:52115572-52115591 | None:intergenic | 30.0% |
! | TAAAATCCTGCGATTTTGTA+TGG | - | chr2.1:52115033-52115052 | MS.gene037087:CDS | 30.0% |
! | TGCAACCATATTTTTCATTC+GGG | + | chr2.1:52115571-52115590 | None:intergenic | 30.0% |
! | TTGCATTACAACTAGTGTTT+TGG | - | chr2.1:52115250-52115269 | MS.gene037087:CDS | 30.0% |
!! | AAAATCGCAGGATTTTAAAG+GGG | + | chr2.1:52115030-52115049 | None:intergenic | 30.0% |
!!! | GATTTTGAAGCCATTTTACT+AGG | - | chr2.1:52115073-52115092 | MS.gene037087:CDS | 30.0% |
AACAAAGTCACAACCTGAAA+TGG | + | chr2.1:52115663-52115682 | None:intergenic | 35.0% | |
AACGATTGATCTTACAAGGT+AGG | - | chr2.1:52116428-52116447 | MS.gene037087:CDS | 35.0% | |
ACAAAGTCACAACCTGAAAT+GGG | + | chr2.1:52115662-52115681 | None:intergenic | 35.0% | |
ATCATGGTGTAGATATCACA+AGG | - | chr2.1:52115223-52115242 | MS.gene037087:CDS | 35.0% | |
CGAATGAAAAATATGGTTGC+AGG | - | chr2.1:52115570-52115589 | MS.gene037087:intron | 35.0% | |
CTTAAGCATTCCAATCTTTC+AGG | - | chr2.1:52114513-52114532 | MS.gene037087:CDS | 35.0% | |
GAGTTCCTTATGATTCCAAA+TGG | - | chr2.1:52116007-52116026 | MS.gene037087:intron | 35.0% | |
GCAATTCATCTCAAATCCTT+CGG | - | chr2.1:52116167-52116186 | MS.gene037087:intron | 35.0% | |
GTTGGAAATCATCATAGACA+CGG | + | chr2.1:52114458-52114477 | None:intergenic | 35.0% | |
TACCTTGTAAGATCAATCGT+TGG | + | chr2.1:52116429-52116448 | None:intergenic | 35.0% | |
TGAAATCCATACAAAATCGC+AGG | + | chr2.1:52115042-52115061 | None:intergenic | 35.0% | |
! | CAAAATCGAGATTTTGCTTC+AGG | - | chr2.1:52114778-52114797 | MS.gene037087:intron | 35.0% |
! | GAGTTCCTAAAGTAACTTGT+TGG | + | chr2.1:52115979-52115998 | None:intergenic | 35.0% |
! | GTCGCAAAATCCTGAATTTT+AGG | - | chr2.1:52115150-52115169 | MS.gene037087:CDS | 35.0% |
! | TTTGGAATCATAAGGAACTC+TGG | + | chr2.1:52116007-52116026 | None:intergenic | 35.0% |
! | TTTGGCATTTTAAACACCGA+AGG | + | chr2.1:52116186-52116205 | None:intergenic | 35.0% |
!! | CGCTTTTTGAATGTTGTTGT+CGG | + | chr2.1:52116479-52116498 | None:intergenic | 35.0% |
AAAGGAGATAGGCATTACCA+TGG | + | chr2.1:52116080-52116099 | None:intergenic | 40.0% | |
AAGGAGATAGGCATTACCAT+GGG | + | chr2.1:52116079-52116098 | None:intergenic | 40.0% | |
AGACACGATATTCAGTGTGA+AGG | - | chr2.1:52116366-52116385 | MS.gene037087:intron | 40.0% | |
ATGCAACAATCGAACACTTG+AGG | + | chr2.1:52114481-52114500 | None:intergenic | 40.0% | |
CAAAGTCACAACCTGAAATG+GGG | + | chr2.1:52115661-52115680 | None:intergenic | 40.0% | |
CAAGGCAAAGAAAAGGAGAT+AGG | + | chr2.1:52116091-52116110 | None:intergenic | 40.0% | |
CCATAGCAGAATCCCAATAT+AGG | + | chr2.1:52115105-52115124 | None:intergenic | 40.0% | |
CCATGCCCGAATGAAAAATA+TGG | - | chr2.1:52115563-52115582 | MS.gene037087:intron | 40.0% | |
CCATTTCAGCAATAGACACA+AGG | - | chr2.1:52115706-52115725 | MS.gene037087:intron | 40.0% | |
CCTATATTGGGATTCTGCTA+TGG | - | chr2.1:52115102-52115121 | MS.gene037087:CDS | 40.0% | |
CCTTGTGTCTATTGCTGAAA+TGG | + | chr2.1:52115709-52115728 | None:intergenic | 40.0% | |
CTATGGATTTGAGTCGTTGA+AGG | - | chr2.1:52115119-52115138 | MS.gene037087:CDS | 40.0% | |
GACCAACGATTGATCTTACA+AGG | - | chr2.1:52116424-52116443 | MS.gene037087:CDS | 40.0% | |
GCAGATGCAAATCTTCGTAA+AGG | - | chr2.1:52116303-52116322 | MS.gene037087:intron | 40.0% | |
GTGTCTATTGCTGAAATGGT+TGG | + | chr2.1:52115705-52115724 | None:intergenic | 40.0% | |
TGCAACAATCGAACACTTGA+GGG | + | chr2.1:52114480-52114499 | None:intergenic | 40.0% | |
TTCGATTTCGATCTTCCCTT+TGG | + | chr2.1:52114805-52114824 | None:intergenic | 40.0% | |
! | AGATTTTGCTTCAGGTCCAA+AGG | - | chr2.1:52114786-52114805 | MS.gene037087:intron | 40.0% |
! | CCATATTTTTCATTCGGGCA+TGG | + | chr2.1:52115566-52115585 | None:intergenic | 40.0% |
! | GATTTTGCTTCAGGTCCAAA+GGG | - | chr2.1:52114787-52114806 | MS.gene037087:intron | 40.0% |
! | GCAGTCAATATTTGCTGCTT+TGG | - | chr2.1:52115863-52115882 | MS.gene037087:intron | 40.0% |
!! | AGAGGTTCAGAAGTACCATT+TGG | + | chr2.1:52116025-52116044 | None:intergenic | 40.0% |
!! | AGGATTTTAAAGGGGTTCGA+AGG | + | chr2.1:52115022-52115041 | None:intergenic | 40.0% |
!! | AGTCGGCATTTTGACAACAA+CGG | - | chr2.1:52115178-52115197 | MS.gene037087:CDS | 40.0% |
AAGCGAATAGCAATCCATCC+AGG | + | chr2.1:52116330-52116349 | None:intergenic | 45.0% | |
ACAATCGAACACTTGAGGGT+TGG | + | chr2.1:52114476-52114495 | None:intergenic | 45.0% | |
AGGAGATAGGCATTACCATG+GGG | + | chr2.1:52116078-52116097 | None:intergenic | 45.0% | |
ATCTTCGTAAAGGACCTGGA+TGG | - | chr2.1:52116313-52116332 | MS.gene037087:intron | 45.0% | |
CCTGAAATGGGGCAAAAACA+TGG | + | chr2.1:52115650-52115669 | None:intergenic | 45.0% | |
GCAAATCTTCGTAAAGGACC+TGG | - | chr2.1:52116309-52116328 | MS.gene037087:intron | 45.0% | |
GGCATCATCATCAGACTTCA+AGG | + | chr2.1:52115774-52115793 | None:intergenic | 45.0% | |
GTTGGACAACACTTCTGATG+AGG | + | chr2.1:52115687-52115706 | None:intergenic | 45.0% | |
TTGAATGTTGTTGTCGGCAG+CGG | + | chr2.1:52116473-52116492 | None:intergenic | 45.0% | |
! | CATAACTTGCACAAACCCCA+TGG | - | chr2.1:52116060-52116079 | MS.gene037087:intron | 45.0% |
! | CTACCTGCTGTTCTAAGCTT+GGG | - | chr2.1:52115459-52115478 | MS.gene037087:CDS | 45.0% |
! | TCTACCTGCTGTTCTAAGCT+TGG | - | chr2.1:52115458-52115477 | MS.gene037087:CDS | 45.0% |
!! | CCATGTTTTTGCCCCATTTC+AGG | - | chr2.1:52115647-52115666 | MS.gene037087:intron | 45.0% |
ATCAATCGTTGGTCCTGCAC+TGG | + | chr2.1:52116418-52116437 | None:intergenic | 50.0% | |
CAAGAAAACGTACCCAGTGC+AGG | - | chr2.1:52116402-52116421 | MS.gene037087:intron | 50.0% | |
GCAGCCTTTGCTGAATCAAC+AGG | + | chr2.1:52114421-52114440 | None:intergenic | 50.0% | |
GTTCCCAAGCTTAGAACAGC+AGG | + | chr2.1:52115465-52115484 | None:intergenic | 50.0% | |
TCAATCGTTGGTCCTGCACT+GGG | + | chr2.1:52116417-52116436 | None:intergenic | 50.0% | |
!! | CACTCGGACTCAGAAGCATT+TGG | + | chr2.1:52115890-52115909 | None:intergenic | 50.0% |
!! | GGAGCCTGTTGATTCAGCAA+AGG | - | chr2.1:52114414-52114433 | MS.gene037087:CDS | 50.0% |
ACCTCGTCCTCCGTCTCCTT+GGG | - | chr2.1:52116509-52116528 | MS.gene037087:CDS | 60.0% | |
CAAGGAGACGGAGGACGAGG+TGG | + | chr2.1:52116510-52116529 | None:intergenic | 65.0% | |
CACCTCGTCCTCCGTCTCCT+TGG | - | chr2.1:52116508-52116527 | MS.gene037087:CDS | 65.0% | |
CCTCGTCCTCCGTCTCCTTG+GGG | - | chr2.1:52116510-52116529 | MS.gene037087:CDS | 65.0% | |
GAGACGGAGGACGAGGTGGA+GGG | + | chr2.1:52116506-52116525 | None:intergenic | 65.0% | |
CCCCAAGGAGACGGAGGACG+AGG | + | chr2.1:52116513-52116532 | None:intergenic | 70.0% | |
GGAGACGGAGGACGAGGTGG+AGG | + | chr2.1:52116507-52116526 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 52114412 | 52116537 | 52114412 | ID=MS.gene037087 |
chr2.1 | mRNA | 52114412 | 52116537 | 52114412 | ID=MS.gene037087.t1;Parent=MS.gene037087 |
chr2.1 | exon | 52116415 | 52116537 | 52116415 | ID=MS.gene037087.t1.exon1;Parent=MS.gene037087.t1 |
chr2.1 | CDS | 52116415 | 52116537 | 52116415 | ID=cds.MS.gene037087.t1;Parent=MS.gene037087.t1 |
chr2.1 | exon | 52114868 | 52115515 | 52114868 | ID=MS.gene037087.t1.exon2;Parent=MS.gene037087.t1 |
chr2.1 | CDS | 52114868 | 52115515 | 52114868 | ID=cds.MS.gene037087.t1;Parent=MS.gene037087.t1 |
chr2.1 | exon | 52114412 | 52114642 | 52114412 | ID=MS.gene037087.t1.exon3;Parent=MS.gene037087.t1 |
chr2.1 | CDS | 52114412 | 52114642 | 52114412 | ID=cds.MS.gene037087.t1;Parent=MS.gene037087.t1 |
Gene Sequence |
Protein sequence |