AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044969


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044969.t1 MTR_7g024290 83.596 317 42 3 1 307 1 317 0.0 528
MS.gene044969.t1 MTR_5g067400 73.016 315 76 2 1 306 1 315 2.38e-164 459
MS.gene044969.t1 MTR_1g046640 72.785 316 76 3 1 307 1 315 2.07e-162 454
MS.gene044969.t1 MTR_1g046650 70.253 316 84 3 1 307 1 315 5.97e-158 443
MS.gene044969.t1 MTR_1g046650 70.253 316 84 3 1 307 32 346 1.06e-157 444
MS.gene044969.t1 MTR_7g094390 70.382 314 84 2 3 307 164 477 7.62e-154 439
MS.gene044969.t1 MTR_5g076720 68.139 317 89 3 3 307 74 390 1.06e-146 418
MS.gene044969.t1 MTR_1g046650 70.447 291 76 3 26 307 26 315 4.99e-144 408
MS.gene044969.t1 MTR_5g076810 72.761 268 63 3 49 306 2 269 3.94e-133 379
MS.gene044969.t1 MTR_5g076370 64.013 314 100 4 4 304 26 339 4.10e-133 381
MS.gene044969.t1 MTR_2g038430 60.736 326 106 4 4 307 18 343 6.52e-133 381
MS.gene044969.t1 MTR_5g076660 64.537 313 99 3 4 304 26 338 6.97e-133 381
MS.gene044969.t1 MTR_5g076520 64.286 322 100 5 1 307 1 322 1.20e-131 377
MS.gene044969.t1 MTR_5g061290 61.755 319 105 5 4 307 11 327 2.67e-131 376
MS.gene044969.t1 MTR_2g038420 63.208 318 103 5 4 307 18 335 7.99e-130 373
MS.gene044969.t1 MTR_5g076820 68.683 281 73 6 1 268 10 288 7.26e-125 358
MS.gene044969.t1 MTR_5g076505 64.164 293 93 3 27 307 23 315 7.07e-124 357
MS.gene044969.t1 MTR_1g046650 68.016 247 69 3 70 307 1 246 1.01e-115 334
MS.gene044969.t1 MTR_5g076540 68.559 229 61 2 1 219 1 228 1.15e-101 298
MS.gene044969.t1 MTR_5g077020 62.121 198 53 6 53 232 17 210 7.71e-71 219
MS.gene044969.t1 MTR_4g094468 45.662 219 109 3 6 215 92 309 5.15e-63 202
MS.gene044969.t1 MTR_4g058025 66.406 128 33 3 68 185 1 128 3.26e-46 154
MS.gene044969.t1 MTR_5g061310 70.130 77 23 0 231 307 1 77 9.04e-30 108
MS.gene044969.t1 MTR_3g017590 26.244 221 136 6 5 201 45 262 1.75e-20 90.1
MS.gene044969.t1 MTR_7g085590 26.667 240 152 5 5 231 57 285 3.08e-20 89.0
MS.gene044969.t1 MTR_8g038370 30.047 213 126 7 10 201 111 321 3.40e-20 90.1
MS.gene044969.t1 MTR_7g105080 60.000 75 30 0 232 306 1 75 1.29e-19 83.2
MS.gene044969.t1 MTR_3g092130 60.000 75 30 0 232 306 1 75 1.29e-19 83.2
MS.gene044969.t1 MTR_1g059690 60.000 75 30 0 232 306 1 75 1.29e-19 83.2
MS.gene044969.t1 MTR_4g009980 59.375 64 26 0 244 307 8 71 1.30e-19 81.6
MS.gene044969.t1 MTR_5g092700 60.000 75 30 0 232 306 1 75 1.79e-19 83.6
MS.gene044969.t1 MTR_4g073580 60.000 75 30 0 232 306 1 75 1.79e-19 83.6
MS.gene044969.t1 MTR_8g088060 60.000 75 30 0 232 306 1 75 1.80e-19 84.0
MS.gene044969.t1 MTR_5g033960 60.000 75 30 0 232 306 1 75 1.96e-19 83.6
MS.gene044969.t1 MTR_7g116360 53.191 94 44 0 213 306 30 123 2.39e-19 86.3
MS.gene044969.t1 MTR_7g116360 55.294 85 38 0 222 306 115 199 3.66e-18 83.2
MS.gene044969.t1 MTR_7g116360 55.294 85 38 0 222 306 191 275 3.66e-18 83.2
MS.gene044969.t1 MTR_3g092130 60.000 75 30 0 232 306 1 75 2.94e-19 82.8
MS.gene044969.t1 MTR_4g073580 60.000 75 30 0 232 306 1 75 4.76e-19 83.6
MS.gene044969.t1 MTR_8g027520 26.038 265 164 5 3 248 45 296 5.93e-19 85.9
MS.gene044969.t1 MTR_8g027520 26.038 265 164 5 3 248 36 287 6.29e-19 85.5
MS.gene044969.t1 MTR_7g117415 25.660 265 165 5 3 248 53 304 9.87e-19 85.5
MS.gene044969.t1 MTR_3g091510 27.103 214 131 4 10 201 59 269 1.04e-18 85.1
MS.gene044969.t1 MTR_1g066390 60.000 75 30 0 232 306 1 75 1.15e-18 83.6
MS.gene044969.t1 MTR_1g066390 60.000 75 30 0 232 306 77 151 1.15e-18 83.6
MS.gene044969.t1 MTR_1g066390 60.000 75 30 0 232 306 153 227 1.15e-18 83.6
MS.gene044969.t1 MTR_4g088485 60.000 75 30 0 232 306 1 75 1.18e-18 83.2
MS.gene044969.t1 MTR_4g088485 60.000 75 30 0 232 306 138 212 1.18e-18 83.2
MS.gene044969.t1 MTR_7g116360 60.000 75 30 0 232 306 1 75 1.24e-18 83.2
MS.gene044969.t1 MTR_7g116360 60.000 75 30 0 232 306 77 151 1.24e-18 83.2
MS.gene044969.t1 MTR_7g116360 60.000 75 30 0 232 306 153 227 1.24e-18 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 1 75 3.38e-18 82.8
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 77 151 3.38e-18 82.8
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 153 227 3.38e-18 82.8
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 1 75 4.27e-18 82.8
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 77 151 4.27e-18 82.8
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 153 227 4.27e-18 82.8
MS.gene044969.t1 MTR_6g061930 60.000 75 30 0 232 306 1 75 4.51e-18 82.8
MS.gene044969.t1 MTR_6g061930 60.000 75 30 0 232 306 77 151 4.51e-18 82.8
MS.gene044969.t1 MTR_6g061930 60.000 75 30 0 232 306 214 288 4.51e-18 82.8
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 1 75 4.52e-18 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 77 151 4.52e-18 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 153 227 4.52e-18 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 229 303 4.52e-18 83.2
MS.gene044969.t1 MTR_4g080920 58.667 75 31 0 232 306 77 151 6.56e-18 81.3
MS.gene044969.t1 MTR_4g080920 58.667 75 31 0 232 306 1 75 1.39e-17 80.5
MS.gene044969.t1 MTR_4g080920 49.333 75 38 0 232 306 153 227 7.85e-14 70.1
MS.gene044969.t1 MTR_8g081020 60.000 75 30 0 232 306 1 75 7.67e-18 83.6
MS.gene044969.t1 MTR_8g081020 60.000 75 30 0 232 306 77 151 7.67e-18 83.6
MS.gene044969.t1 MTR_8g081020 60.000 75 30 0 232 306 153 227 7.67e-18 83.6
MS.gene044969.t1 MTR_8g081020 60.000 75 30 0 232 306 229 303 7.67e-18 83.6
MS.gene044969.t1 MTR_8g081020 60.000 75 30 0 232 306 305 379 7.67e-18 83.6
MS.gene044969.t1 MTR_4g080797 60.000 75 30 0 232 306 1 75 7.89e-18 83.6
MS.gene044969.t1 MTR_4g080797 60.000 75 30 0 232 306 77 151 7.89e-18 83.6
MS.gene044969.t1 MTR_4g080797 60.000 75 30 0 232 306 153 227 7.89e-18 83.6
MS.gene044969.t1 MTR_4g080797 60.000 75 30 0 232 306 229 303 7.89e-18 83.6
MS.gene044969.t1 MTR_4g080797 60.000 75 30 0 232 306 305 379 7.89e-18 83.6
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 1 75 7.89e-18 83.6
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 77 151 7.89e-18 83.6
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 153 227 7.89e-18 83.6
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 229 303 7.89e-18 83.6
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 305 379 7.89e-18 83.6
MS.gene044969.t1 MTR_4g091580 60.000 75 30 0 232 306 1 75 8.04e-18 83.2
MS.gene044969.t1 MTR_4g091580 60.000 75 30 0 232 306 77 151 8.04e-18 83.2
MS.gene044969.t1 MTR_4g091580 60.000 75 30 0 232 306 153 227 8.04e-18 83.2
MS.gene044969.t1 MTR_4g091580 60.000 75 30 0 232 306 305 379 8.04e-18 83.2
MS.gene044969.t1 MTR_4g091580 58.667 75 31 0 232 306 229 303 2.59e-17 82.0
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 1 75 8.44e-18 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 77 151 8.44e-18 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 153 227 8.44e-18 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 229 303 8.44e-18 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 305 379 8.44e-18 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 1 75 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 77 151 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 153 227 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 229 303 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 305 379 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 381 455 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 1 75 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 77 151 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 153 227 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 229 303 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 305 379 1.18e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 381 455 1.18e-17 83.2
MS.gene044969.t1 MTR_4g091580 60.000 75 30 0 232 306 1 75 1.35e-17 83.6
MS.gene044969.t1 MTR_4g091580 60.000 75 30 0 232 306 77 151 1.35e-17 83.6
MS.gene044969.t1 MTR_4g091580 60.000 75 30 0 232 306 153 227 1.35e-17 83.6
MS.gene044969.t1 MTR_4g091580 60.000 75 30 0 232 306 229 303 1.35e-17 83.6
MS.gene044969.t1 MTR_4g091580 60.000 75 30 0 232 306 381 455 1.35e-17 83.6
MS.gene044969.t1 MTR_4g091580 60.000 75 30 0 232 306 457 531 1.35e-17 83.6
MS.gene044969.t1 MTR_4g091580 58.667 75 31 0 232 306 305 379 1.36e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 1 75 1.46e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 77 151 1.46e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 153 227 1.46e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 229 303 1.46e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 305 379 1.46e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 381 455 1.46e-17 83.2
MS.gene044969.t1 MTR_8g018230 60.000 75 30 0 232 306 457 531 1.46e-17 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 1 75 1.51e-17 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 77 151 1.51e-17 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 153 227 1.51e-17 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 229 303 1.51e-17 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 305 379 1.51e-17 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 381 455 1.51e-17 83.2
MS.gene044969.t1 MTR_4g081010 60.000 75 30 0 232 306 457 531 1.51e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 77 151 1.80e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 153 227 1.80e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 229 303 1.80e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 305 379 1.80e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 381 455 1.80e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 457 531 1.80e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 533 607 1.80e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 609 683 1.80e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 685 759 1.80e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 761 835 1.80e-17 83.2
MS.gene044969.t1 MTR_4g088495 60.000 75 30 0 232 306 1 75 2.34e-17 82.8
MS.gene044969.t1 MTR_1g008120 31.579 152 96 3 10 159 67 212 3.96e-17 80.9
MS.gene044969.t1 MTR_1g054335 25.352 213 134 4 11 201 58 267 1.03e-16 79.3
MS.gene044969.t1 MTR_8g479250 55.294 85 38 0 222 306 131 215 1.25e-16 79.0
MS.gene044969.t1 MTR_8g479250 47.561 82 32 1 222 303 207 277 2.48e-11 63.5
MS.gene044969.t1 MTR_7g093600 25.352 213 134 4 11 201 59 268 2.67e-16 78.2
MS.gene044969.t1 MTR_5g076760 61.404 57 22 0 242 298 5 61 1.56e-15 70.9
MS.gene044969.t1 MTR_5g076350 50.649 77 37 1 232 307 8 84 2.64e-14 67.8
MS.gene044969.t1 MTR_5g076740 52.632 76 35 1 232 306 86 161 1.10e-13 68.2
MS.gene044969.t1 MTR_5g076780 54.839 62 28 0 243 304 1 62 1.59e-13 65.1
MS.gene044969.t1 MTR_5g076340 50.000 78 37 2 232 307 9 86 5.07e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044969.t1 AT5G37930 34.454 238 143 4 4 228 103 340 7.70e-41 145
MS.gene044969.t1 AT5G37890 35.160 219 129 4 10 215 47 265 3.07e-38 137
MS.gene044969.t1 AT5G37870 32.653 245 149 6 6 234 37 281 1.53e-36 132
MS.gene044969.t1 AT1G66620 32.917 240 145 5 5 228 35 274 1.90e-36 133
MS.gene044969.t1 AT1G66660 31.579 247 150 5 2 229 94 340 6.78e-35 129
MS.gene044969.t1 AT1G66650 32.114 246 145 7 4 228 76 320 2.26e-33 125
MS.gene044969.t1 AT1G66630 31.474 251 139 6 11 228 46 296 1.68e-31 119
MS.gene044969.t1 AT5G37910 44.737 114 63 0 11 124 35 148 3.52e-31 118
MS.gene044969.t1 AT5G62800 31.250 256 158 6 11 248 40 295 2.88e-29 114
MS.gene044969.t1 AT5G62800 36.022 186 104 4 11 181 40 225 1.38e-28 112
MS.gene044969.t1 AT3G62250 60.000 75 30 0 232 306 1 75 1.44e-19 84.0
MS.gene044969.t1 AT1G23410 60.000 75 30 0 232 306 1 75 1.45e-19 84.0
MS.gene044969.t1 AT2G47110 60.000 75 30 0 232 306 1 75 1.50e-19 84.0
MS.gene044969.t1 AT2G47110 60.000 75 30 0 232 306 1 75 1.50e-19 84.0
MS.gene044969.t1 AT3G52590 60.000 75 30 0 232 306 1 75 1.96e-19 82.8
MS.gene044969.t1 AT2G36170 60.000 75 30 0 232 306 1 75 1.96e-19 82.8
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 1 75 2.74e-19 83.2
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 77 151 2.74e-19 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 1 75 2.74e-19 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 77 151 2.74e-19 83.2
MS.gene044969.t1 AT2G35635 60.000 75 30 0 232 306 1 75 2.78e-19 83.2
MS.gene044969.t1 AT1G31340 60.000 75 30 0 232 306 1 75 3.01e-19 83.2
MS.gene044969.t1 AT5G37640 56.471 85 37 0 222 306 69 153 8.40e-19 85.5
MS.gene044969.t1 AT5G37640 61.333 75 29 0 232 306 155 229 2.11e-18 84.3
MS.gene044969.t1 AT5G37640 59.211 76 30 1 232 306 231 306 3.70e-17 80.9
MS.gene044969.t1 AT5G37640 56.000 75 33 0 232 306 3 77 4.48e-15 75.1
MS.gene044969.t1 AT3G61790 35.484 124 78 1 3 124 52 175 8.87e-19 85.5
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 1 75 1.30e-18 83.2
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 77 151 1.30e-18 83.2
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 153 227 1.30e-18 83.2
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 1 75 1.30e-18 83.2
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 77 151 1.30e-18 83.2
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 153 227 1.30e-18 83.2
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 1 75 1.30e-18 83.2
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 77 151 1.30e-18 83.2
MS.gene044969.t1 AT4G05050 60.000 75 30 0 232 306 153 227 1.30e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 1 75 1.30e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 77 151 1.30e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 153 227 1.30e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 1 75 1.30e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 77 151 1.30e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 153 227 1.30e-18 83.2
MS.gene044969.t1 AT1G65350 60.000 75 30 0 232 306 152 226 3.65e-18 83.6
MS.gene044969.t1 AT1G65350 60.000 75 30 0 232 306 1 75 4.66e-18 83.6
MS.gene044969.t1 AT1G65350 58.667 75 30 1 232 306 77 150 2.46e-15 75.5
MS.gene044969.t1 AT1G65350 48.315 89 32 2 232 306 228 316 8.30e-12 65.5
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 1 75 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 77 151 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 153 227 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 229 303 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 1 75 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 77 151 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 153 227 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 229 303 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 1 75 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 77 151 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 153 227 4.01e-18 83.6
MS.gene044969.t1 AT5G03240 60.000 75 30 0 232 306 229 303 4.01e-18 83.6
MS.gene044969.t1 AT5G20620 60.000 75 30 0 232 306 1 75 4.01e-18 83.6
MS.gene044969.t1 AT5G20620 60.000 75 30 0 232 306 77 151 4.01e-18 83.6
MS.gene044969.t1 AT5G20620 60.000 75 30 0 232 306 153 227 4.01e-18 83.6
MS.gene044969.t1 AT5G20620 60.000 75 30 0 232 306 229 303 4.01e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 1 75 4.16e-18 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 77 151 4.16e-18 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 153 227 4.16e-18 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 229 303 4.16e-18 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 1 75 4.16e-18 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 77 151 4.16e-18 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 153 227 4.16e-18 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 229 303 4.16e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 1 75 4.16e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 77 151 4.16e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 153 227 4.16e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 229 303 4.16e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 1 75 4.16e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 77 151 4.16e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 153 227 4.16e-18 83.2
MS.gene044969.t1 AT4G02890 60.000 75 30 0 232 306 229 303 4.16e-18 83.2
MS.gene044969.t1 AT1G55060 58.667 75 31 0 232 306 77 151 4.80e-18 81.6
MS.gene044969.t1 AT1G55060 54.118 85 39 0 222 306 143 227 8.94e-18 81.3
MS.gene044969.t1 AT1G55060 53.333 75 35 0 232 306 1 75 2.26e-14 71.6
MS.gene044969.t1 AT5G20620 60.000 75 30 0 232 306 1 75 7.85e-18 83.6
MS.gene044969.t1 AT5G20620 60.000 75 30 0 232 306 77 151 7.85e-18 83.6
MS.gene044969.t1 AT5G20620 60.000 75 30 0 232 306 153 227 7.85e-18 83.6
MS.gene044969.t1 AT5G20620 60.000 75 30 0 232 306 229 303 7.85e-18 83.6
MS.gene044969.t1 AT5G20620 60.000 75 30 0 232 306 305 379 7.85e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 1 75 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 77 151 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 153 227 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 229 303 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 305 379 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 1 75 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 77 151 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 153 227 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 229 303 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 305 379 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 1 75 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 77 151 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 153 227 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 229 303 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 305 379 8.26e-18 83.6
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 1 75 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 77 151 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 153 227 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 229 303 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 305 379 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 381 455 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 1 75 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 77 151 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 153 227 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 229 303 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 305 379 1.24e-17 83.2
MS.gene044969.t1 AT4G05320 60.000 75 30 0 232 306 381 455 1.24e-17 83.2
MS.gene044969.t1 AT3G09790 56.471 85 37 0 222 306 69 153 1.33e-17 83.6
MS.gene044969.t1 AT3G09790 57.333 75 32 0 232 306 3 77 2.52e-16 79.7
MS.gene044969.t1 AT3G09790 58.904 73 28 1 232 302 319 391 3.97e-15 76.3
MS.gene044969.t1 AT3G09790 56.164 73 32 0 232 304 552 624 5.10e-14 72.8
MS.gene044969.t1 AT3G09790 56.471 85 37 0 222 306 69 153 1.33e-17 83.6
MS.gene044969.t1 AT3G09790 57.333 75 32 0 232 306 3 77 2.52e-16 79.7
MS.gene044969.t1 AT3G09790 58.904 73 28 1 232 302 319 391 3.97e-15 76.3
MS.gene044969.t1 AT3G09790 56.164 73 32 0 232 304 552 624 5.10e-14 72.8
MS.gene044969.t1 AT4G27880 28.169 213 130 6 10 201 60 270 1.80e-17 82.0
MS.gene044969.t1 AT1G66660 27.670 206 128 6 43 229 13 216 4.08e-17 79.0
MS.gene044969.t1 AT3G58040 24.891 229 146 5 10 215 56 281 9.14e-17 79.7
MS.gene044969.t1 AT3G58040 24.891 229 146 5 10 215 56 281 9.14e-17 79.7
MS.gene044969.t1 AT2G41980 24.096 249 157 6 10 229 53 298 1.20e-16 79.3
MS.gene044969.t1 AT3G58040 33.333 117 76 1 10 124 56 172 6.06e-16 75.9
MS.gene044969.t1 AT1G53930 52.703 74 35 0 231 304 85 158 9.72e-15 70.9
MS.gene044969.t1 AT1G66610 44.444 81 45 0 5 85 152 232 9.89e-15 72.8
MS.gene044969.t1 AT1G66610 47.619 63 33 0 11 73 53 115 2.34e-12 65.9
MS.gene044969.t1 AT1G66610 44.928 69 38 0 5 73 47 115 1.10e-12 68.2
MS.gene044969.t1 AT5G37900 27.326 172 110 4 59 215 48 219 3.87e-11 62.4

Find 63 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCATTGGTCCTAACTCTTC+TGG 0.129441 7.1:+73332380 MS.gene044969:CDS
CCATGTTACTGTCCCCTTTC+AGG 0.141370 7.1:+73332120 MS.gene044969:CDS
TCTAAGTATTCCTGTCTTTC+AGG 0.178018 7.1:+73330437 MS.gene044969:CDS
CTTCTCTTGTATGTTGTAAT+TGG 0.213065 7.1:-73333096 None:intergenic
CACCTCGTCCTCCGCCTCAT+TGG 0.215631 7.1:+73333128 MS.gene044969:CDS
ACCTCGTCCTCCGCCTCATT+GGG 0.219836 7.1:+73333129 MS.gene044969:CDS
CAATAATGCTACTATGAGTT+TGG 0.241803 7.1:+73332337 MS.gene044969:CDS
AAATGAGTTACACTGGAAAT+AGG 0.344851 7.1:+73332070 MS.gene044969:CDS
TGACACTTGTTCCTAAGTTT+AGG 0.348740 7.1:-73331943 None:intergenic
CGAGTATAGTTATGATATAT+TGG 0.387415 7.1:+73332406 MS.gene044969:CDS
CGAATGCAAAACATGGTTGC+AGG 0.390717 7.1:+73332043 MS.gene044969:CDS
GCATTGGTCCTAACTCTTCT+GGG 0.401380 7.1:+73332381 MS.gene044969:CDS
CCCCATGTTTATGGCTGAAA+TGG 0.405710 7.1:-73332179 None:intergenic
ATGCAACGTCTGATCTTTGA+TGG 0.409178 7.1:+73333044 MS.gene044969:CDS
AATAATGCTACTATGAGTTT+GGG 0.418649 7.1:+73332338 MS.gene044969:CDS
CAGTTTGCATATCTCAGACT+TGG 0.421193 7.1:-73332429 None:intergenic
TGAGGCGGAGGACGAGGTGG+AGG 0.428809 7.1:-73333124 None:intergenic
GCAGTCAATATTTGCTGCAT+TGG 0.437797 7.1:+73332365 MS.gene044969:CDS
CTTGTATGTTGTAATTGGCA+AGG 0.445238 7.1:-73333091 None:intergenic
CCCCAATGAGGCGGAGGACG+AGG 0.449082 7.1:-73333130 None:intergenic
AACAAAGTCACAACCTGAAA+GGG 0.450677 7.1:-73332133 None:intergenic
AGAGGTTCAGAAGAACGAAA+TGG 0.462744 7.1:-73332524 None:intergenic
GTTGTAATTCAGTGTGATAA+TGG 0.467413 7.1:+73331895 MS.gene044969:intron
TGAAAGACAGGAATACTTAG+AGG 0.482175 7.1:-73330435 None:intergenic
TGTCTGAACTCTTAACCCTC+AGG 0.482923 7.1:-73332968 None:intergenic
TACTCGGACCCAGAAGAGTT+AGG 0.488196 7.1:-73332389 None:intergenic
CAATATATCATAACTATACT+CGG 0.501784 7.1:-73332405 None:intergenic
GTTCCTAAGTTTAGGACAGC+AGG 0.503985 7.1:-73331935 None:intergenic
CTACCTGCTGTCCTAAACTT+AGG 0.504618 7.1:+73331932 MS.gene044969:CDS
TGTTGTAATTGGCAAGGGTC+AGG 0.504632 7.1:-73333085 None:intergenic
CAAATGCATACCTGAAAGAC+AGG 0.508688 7.1:-73330447 None:intergenic
ATGCAAATTTCTAGCTTGAG+AGG 0.533709 7.1:-73332542 None:intergenic
AGATTGCAATAGATTCTCAA+TGG 0.536387 7.1:-73332004 None:intergenic
GTCTGAACTCTTAACCCTCA+GGG 0.537566 7.1:-73332967 None:intergenic
CAACAAAGTCACAACCTGAA+AGG 0.540955 7.1:-73332134 None:intergenic
TTGTATGTTGTAATTGGCAA+GGG 0.547486 7.1:-73333090 None:intergenic
AACCATTTCAGCCATAAACA+TGG 0.562638 7.1:+73332177 MS.gene044969:CDS
TCAGACGTTGCATGTGCACC+TGG 0.565223 7.1:-73333034 None:intergenic
ACCATTTCAGCCATAAACAT+GGG 0.588005 7.1:+73332178 MS.gene044969:CDS
ATGTTTATGGCTGAAATGGT+TGG 0.588725 7.1:-73332175 None:intergenic
TCTAGTCCCCAATGAGGCGG+AGG 0.594709 7.1:-73333136 None:intergenic
CCTGAAAGGGGACAGTAACA+TGG 0.599066 7.1:-73332120 None:intergenic
GAGGCGGAGGACGAGGTGGA+GGG 0.599287 7.1:-73333123 None:intergenic
CCTCGTCCTCCGCCTCATTG+GGG 0.602662 7.1:+73333130 MS.gene044969:CDS
TTAGAGTTTGAAATCGTCAG+AGG 0.607477 7.1:-73330384 None:intergenic
CAATGAGGCGGAGGACGAGG+TGG 0.608928 7.1:-73333127 None:intergenic
TCTACATAATCACCCCGACT+AGG 0.616280 7.1:+73332934 MS.gene044969:CDS
GAGTTGCTAAAGTAAACTGT+TGG 0.616702 7.1:-73332478 None:intergenic
GTTCTTCAAGAGGAAAATGA+CGG 0.617899 7.1:+73332299 MS.gene044969:intron
CCATTTCAGCCATAAACATG+GGG 0.621391 7.1:+73332179 MS.gene044969:CDS
GAATGCAAAACATGGTTGCA+GGG 0.629567 7.1:+73332044 MS.gene044969:CDS
AGGGAGAAAATGAGTTACAC+TGG 0.636460 7.1:+73332063 MS.gene044969:CDS
CCATGTCCGAATGCAAAACA+TGG 0.639006 7.1:+73332036 MS.gene044969:CDS
ACAAAGTCACAACCTGAAAG+GGG 0.645303 7.1:-73332132 None:intergenic
CTGAACTCTTAACCCTCAGG+GGG 0.662405 7.1:-73332965 None:intergenic
GGGGATCATCTTCCTAGTCG+GGG 0.667464 7.1:-73332946 None:intergenic
AGACACAGTAGCCAATGTGA+AGG 0.670298 7.1:+73332986 MS.gene044969:CDS
TCTGAACTCTTAACCCTCAG+GGG 0.679402 7.1:-73332966 None:intergenic
TCATCTAGTCCCCAATGAGG+CGG 0.679966 7.1:-73333139 None:intergenic
AAGAACGAAATGGAATCACA+AGG 0.699518 7.1:-73332514 None:intergenic
TGGTCATCTAGTCCCCAATG+AGG 0.703849 7.1:-73333142 None:intergenic
GGAGATAGGCGGTACCATGG+GGG 0.718009 7.1:-73332567 None:intergenic
CATTTCAGCCATAAACATGG+GGG 0.731821 7.1:+73332180 MS.gene044969:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAAAAAAAAATTTCTTA+TGG + chr7.1:73332233-73332252 MS.gene044969:CDS 10.0%
!!! ATATTCTTTTATTGATTTAA+TGG + chr7.1:73332890-73332909 MS.gene044969:intron 10.0%
!!! GAGTATTATAATTTTTTTTA+AGG + chr7.1:73331332-73331351 MS.gene044969:intron 10.0%
!! AATAAAATAGTTTCTTTCAA+TGG + chr7.1:73331305-73331324 MS.gene044969:intron 15.0%
!! ATAAAATAGTTTCTTTCAAT+GGG + chr7.1:73331306-73331325 MS.gene044969:intron 15.0%
!! CTAAATATGAGTATATAATT+GGG - chr7.1:73330826-73330845 None:intergenic 15.0%
!! GAAAATAATAAGACTTTAAT+TGG - chr7.1:73332617-73332636 None:intergenic 15.0%
!! TAAATATGAGTATATAATTG+GGG - chr7.1:73330825-73330844 None:intergenic 15.0%
!!! AGAAACTATTTTATTTTGTT+AGG - chr7.1:73331300-73331319 None:intergenic 15.0%
!!! ATAGATTTTGATAATATCTT+AGG + chr7.1:73330744-73330763 MS.gene044969:intron 15.0%
!! AAAATTAATGTACTCAAAGA+CGG - chr7.1:73331733-73331752 None:intergenic 20.0%
!! AAAATTTATTACAGTACAAC+AGG - chr7.1:73332810-73332829 None:intergenic 20.0%
!! AAATATGAGTATATAATTGG+GGG - chr7.1:73330824-73330843 None:intergenic 20.0%
!! AAATTTATTACAGTACAACA+GGG - chr7.1:73332809-73332828 None:intergenic 20.0%
!! AATAAAATTAAGTGAAAGAG+AGG + chr7.1:73331265-73331284 MS.gene044969:intron 20.0%
!! ATTAATTAGAAAATGCATGA+TGG + chr7.1:73330912-73330931 MS.gene044969:intron 20.0%
!! ATTTATATGCAATATGTTTC+TGG + chr7.1:73330516-73330535 MS.gene044969:intron 20.0%
!! CAATATATCATAACTATACT+CGG - chr7.1:73332408-73332427 None:intergenic 20.0%
!! CCAATTATATACTCATATTT+AGG + chr7.1:73330824-73330843 MS.gene044969:intron 20.0%
!! CCTAAATATGAGTATATAAT+TGG - chr7.1:73330827-73330846 None:intergenic 20.0%
!! GAAAAAAAAAAGCAAAGAAA+AGG - chr7.1:73332591-73332610 None:intergenic 20.0%
!! TAAAATAGTTTCTTTCAATG+GGG + chr7.1:73331307-73331326 MS.gene044969:intron 20.0%
!! TATAAAAGCTCAAAAATAGA+AGG - chr7.1:73331611-73331630 None:intergenic 20.0%
!!! ACTTGATTTTCTCAATTTAA+AGG + chr7.1:73330981-73331000 MS.gene044969:intron 20.0%
!!! CTAACAAAACAACTTTATTT+TGG - chr7.1:73332699-73332718 None:intergenic 20.0%
!!! CTATTTTTGAGCTTTTATAT+GGG + chr7.1:73331612-73331631 MS.gene044969:intron 20.0%
!!! TCTATTTTTGAGCTTTTATA+TGG + chr7.1:73331611-73331630 MS.gene044969:intron 20.0%
!!! TCTCAAATCAAATTTTCTTA+TGG + chr7.1:73332204-73332223 MS.gene044969:CDS 20.0%
!!! TTTTATTGATTTAATGGCAA+TGG + chr7.1:73332896-73332915 MS.gene044969:intron 20.0%
! AAAATAGTTTCTTTCAATGG+GGG + chr7.1:73331308-73331327 MS.gene044969:intron 25.0%
! AAAGTTTAGAGAAACAATAC+AGG - chr7.1:73331649-73331668 None:intergenic 25.0%
! AACGTAGAATTTACTTTAGA+GGG + chr7.1:73330869-73330888 MS.gene044969:intron 25.0%
! AATAATGCTACTATGAGTTT+GGG + chr7.1:73332338-73332357 MS.gene044969:CDS 25.0%
! ATAGAGACACAAAACAATTA+GGG + chr7.1:73331072-73331091 MS.gene044969:intron 25.0%
! CGAGTATAGTTATGATATAT+TGG + chr7.1:73332406-73332425 MS.gene044969:CDS 25.0%
! TAACGTAGAATTTACTTTAG+AGG + chr7.1:73330868-73330887 MS.gene044969:intron 25.0%
! TATAGAGACACAAAACAATT+AGG + chr7.1:73331071-73331090 MS.gene044969:intron 25.0%
!! AAGACTTGTTTGATTTACAT+TGG + chr7.1:73331523-73331542 MS.gene044969:intron 25.0%
!! AGACTTGTTTGATTTACATT+GGG + chr7.1:73331524-73331543 MS.gene044969:intron 25.0%
!! CTATACTGCTATAGTATTTT+GGG + chr7.1:73331694-73331713 MS.gene044969:intron 25.0%
!! CTTTATTTGATTCTAGCAAA+TGG + chr7.1:73331841-73331860 MS.gene044969:intron 25.0%
!! GCATTTTATCTCAAATTCAT+CGG + chr7.1:73332662-73332681 MS.gene044969:intron 25.0%
!! TGTATTGTTTCTCTAAACTT+TGG + chr7.1:73331648-73331667 MS.gene044969:intron 25.0%
!!! AATTGCGTTTTGATTTTACT+GGG - chr7.1:73331177-73331196 None:intergenic 25.0%
!!! AATTGTTTTGTGTCTCTATA+GGG - chr7.1:73331071-73331090 None:intergenic 25.0%
!!! CTCGGTTCTATTTTTAAAAT+AGG + chr7.1:73331150-73331169 MS.gene044969:intron 25.0%
!!! TAATTGTTTTGTGTCTCTAT+AGG - chr7.1:73331072-73331091 None:intergenic 25.0%
!!! TGGTTCAAAGTTTAATTTGA+TGG + chr7.1:73331861-73331880 MS.gene044969:intron 25.0%
AAAAATCATCTCCTTCACAT+TGG - chr7.1:73333000-73333019 None:intergenic 30.0%
AAAAGCAAAGAAAAGGAGAT+AGG - chr7.1:73332584-73332603 None:intergenic 30.0%
AAATACTATAGCAGTATAGC+AGG - chr7.1:73331693-73331712 None:intergenic 30.0%
AAATGAGTTACACTGGAAAT+AGG + chr7.1:73332070-73332089 MS.gene044969:CDS 30.0%
AGATTGCAATAGATTCTCAA+TGG - chr7.1:73332007-73332026 None:intergenic 30.0%
ATAGATGCATAACAAATGAC+AGG + chr7.1:73331105-73331124 MS.gene044969:intron 30.0%
ATCTATCCAAAAAAATCCGT+TGG - chr7.1:73330730-73330749 None:intergenic 30.0%
CAATAATGCTACTATGAGTT+TGG + chr7.1:73332337-73332356 MS.gene044969:CDS 30.0%
CTTCTCTTGTATGTTGTAAT+TGG - chr7.1:73333099-73333118 None:intergenic 30.0%
GTTGTAATTCAGTGTGATAA+TGG + chr7.1:73331895-73331914 MS.gene044969:intron 30.0%
TAGATGCATAACAAATGACA+GGG + chr7.1:73331106-73331125 MS.gene044969:intron 30.0%
TAGTAGGAAACAGAAAAGAA+TGG + chr7.1:73331032-73331051 MS.gene044969:intron 30.0%
TCTATCCAAAAAAATCCGTT+GGG - chr7.1:73330729-73330748 None:intergenic 30.0%
TTCTCTAAACTTTGGTATTG+TGG + chr7.1:73331656-73331675 MS.gene044969:intron 30.0%
TTGTATGTTGTAATTGGCAA+GGG - chr7.1:73333093-73333112 None:intergenic 30.0%
! ATTTTCCTCTTGAAGAACAA+TGG - chr7.1:73332297-73332316 None:intergenic 30.0%
! GATCAATGTGTTGTTAATTG+CGG + chr7.1:73332856-73332875 MS.gene044969:intron 30.0%
! GCTATACTGCTATAGTATTT+TGG + chr7.1:73331693-73331712 MS.gene044969:intron 30.0%
!! AAATGCATGATGGATATTGA+AGG + chr7.1:73330922-73330941 MS.gene044969:intron 30.0%
!! CAGTTTTGTAAAGTTGAGTT+AGG - chr7.1:73330782-73330801 None:intergenic 30.0%
!! CTTTACAAAACTGACTTGTA+AGG + chr7.1:73330789-73330808 MS.gene044969:intron 30.0%
!!! ATGTGTTTTTTAAGCCTTAG+AGG + chr7.1:73331498-73331517 MS.gene044969:intron 30.0%
!!! ATTGCGTTTTGATTTTACTG+GGG - chr7.1:73331176-73331195 None:intergenic 30.0%
!!! GAATTGCGTTTTGATTTTAC+TGG - chr7.1:73331178-73331197 None:intergenic 30.0%
AACAAAGTCACAACCTGAAA+GGG - chr7.1:73332136-73332155 None:intergenic 35.0%
AACCATTTCAGCCATAAACA+TGG + chr7.1:73332177-73332196 MS.gene044969:CDS 35.0%
AAGAACGAAATGGAATCACA+AGG - chr7.1:73332517-73332536 None:intergenic 35.0%
ACCATTTCAGCCATAAACAT+GGG + chr7.1:73332178-73332197 MS.gene044969:CDS 35.0%
ACTACTAGACATCATTTGTC+AGG - chr7.1:73331415-73331434 None:intergenic 35.0%
ATGTTTATGGCTGAAATGGT+TGG - chr7.1:73332178-73332197 None:intergenic 35.0%
ATTGTCTCCTTGAAGTCTAA+TGG + chr7.1:73332266-73332285 MS.gene044969:intron 35.0%
CTACTAGACATCATTTGTCA+GGG - chr7.1:73331414-73331433 None:intergenic 35.0%
CTTGTATGTTGTAATTGGCA+AGG - chr7.1:73333094-73333113 None:intergenic 35.0%
GAGTTGCTAAAGTAAACTGT+TGG - chr7.1:73332481-73332500 None:intergenic 35.0%
GTTCTTCAAGAGGAAAATGA+CGG + chr7.1:73332299-73332318 MS.gene044969:intron 35.0%
TCTAAGTATTCCTGTCTTTC+AGG + chr7.1:73330437-73330456 MS.gene044969:CDS 35.0%
TGAAAGACAGGAATACTTAG+AGG - chr7.1:73330438-73330457 None:intergenic 35.0%
TGACACTTGTTCCTAAGTTT+AGG - chr7.1:73331946-73331965 None:intergenic 35.0%
! AACCGAACCTCTAAAAACTA+TGG - chr7.1:73331359-73331378 None:intergenic 35.0%
! ACCGAACCTCTAAAAACTAT+GGG - chr7.1:73331358-73331377 None:intergenic 35.0%
! TTAGAGTTTGAAATCGTCAG+AGG - chr7.1:73330387-73330406 None:intergenic 35.0%
!! ATGCAAATTTCTAGCTTGAG+AGG - chr7.1:73332545-73332564 None:intergenic 35.0%
!! TAGTTTTTAGAGGTTCGGTT+CGG + chr7.1:73331359-73331378 MS.gene044969:intron 35.0%
!! TTAAGGCCCATAGTTTTTAG+AGG + chr7.1:73331349-73331368 MS.gene044969:intron 35.0%
ACAAAGTCACAACCTGAAAG+GGG - chr7.1:73332135-73332154 None:intergenic 40.0%
AGAAATTTGCATAACCCCCA+TGG + chr7.1:73332553-73332572 MS.gene044969:CDS 40.0%
AGACTTCAAGGAGACAATGA+AGG - chr7.1:73332264-73332283 None:intergenic 40.0%
AGAGGTTCAGAAGAACGAAA+TGG - chr7.1:73332527-73332546 None:intergenic 40.0%
AGCAAAGAAAAGGAGATAGG+CGG - chr7.1:73332581-73332600 None:intergenic 40.0%
AGCCTCCTATTTCATAGGAA+CGG - chr7.1:73331132-73331151 None:intergenic 40.0%
AGGGAGAAAATGAGTTACAC+TGG + chr7.1:73332063-73332082 MS.gene044969:CDS 40.0%
ATGCAACGTCTGATCTTTGA+TGG + chr7.1:73333044-73333063 MS.gene044969:CDS 40.0%
ATTGGCTAATAGTGGTGATC+TGG + chr7.1:73330693-73330712 MS.gene044969:intron 40.0%
CAAACAAGTCTTTGCCTCTA+AGG - chr7.1:73331515-73331534 None:intergenic 40.0%
CAAATGCATACCTGAAAGAC+AGG - chr7.1:73330450-73330469 None:intergenic 40.0%
CAACAAAGTCACAACCTGAA+AGG - chr7.1:73332137-73332156 None:intergenic 40.0%
CAGTATAGCAGGTAGCAATA+TGG - chr7.1:73331682-73331701 None:intergenic 40.0%
CAGTTTGCATATCTCAGACT+TGG - chr7.1:73332432-73332451 None:intergenic 40.0%
CATTTCAGCCATAAACATGG+GGG + chr7.1:73332180-73332199 MS.gene044969:CDS 40.0%
CCATTTCAGCCATAAACATG+GGG + chr7.1:73332179-73332198 MS.gene044969:CDS 40.0%
GAATGCAAAACATGGTTGCA+GGG + chr7.1:73332044-73332063 MS.gene044969:CDS 40.0%
GATCACCACTATTAGCCAAT+CGG - chr7.1:73330693-73330712 None:intergenic 40.0%
TGGAACCATTGTTCTTCAAG+AGG + chr7.1:73332289-73332308 MS.gene044969:intron 40.0%
TTCCTATGAAATAGGAGGCT+CGG + chr7.1:73331132-73331151 MS.gene044969:intron 40.0%
TTTGAGAACCCCCATGTTTA+TGG - chr7.1:73332191-73332210 None:intergenic 40.0%
! CTGCAACCATGTTTTGCATT+CGG - chr7.1:73332045-73332064 None:intergenic 40.0%
! GCAGTCAATATTTGCTGCAT+TGG + chr7.1:73332365-73332384 MS.gene044969:CDS 40.0%
! GTAATCCGATTGGCTAATAG+TGG + chr7.1:73330685-73330704 MS.gene044969:intron 40.0%
! TTTTCCCTCCTCATCTTATG+CGG + chr7.1:73331007-73331026 MS.gene044969:intron 40.0%
! TTTTGACAAGACACAGTACC+AGG + chr7.1:73333016-73333035 MS.gene044969:CDS 40.0%
!! CAAAACTGACTTGTAAGGTG+AGG + chr7.1:73330794-73330813 MS.gene044969:intron 40.0%
!! GCCCATAGTTTTTAGAGGTT+CGG + chr7.1:73331354-73331373 MS.gene044969:intron 40.0%
AACCGAGCCTCCTATTTCAT+AGG - chr7.1:73331137-73331156 None:intergenic 45.0%
AGACACAGTAGCCAATGTGA+AGG + chr7.1:73332986-73333005 MS.gene044969:CDS 45.0%
CATCTTGAGCGTAATCCGAT+TGG + chr7.1:73330675-73330694 MS.gene044969:intron 45.0%
CCATGTCCGAATGCAAAACA+TGG + chr7.1:73332036-73332055 MS.gene044969:CDS 45.0%
CCCCATGTTTATGGCTGAAA+TGG - chr7.1:73332182-73332201 None:intergenic 45.0%
CGAATGCAAAACATGGTTGC+AGG + chr7.1:73332043-73332062 MS.gene044969:CDS 45.0%
CTACCTGCTGTCCTAAACTT+AGG + chr7.1:73331932-73331951 MS.gene044969:CDS 45.0%
CTACTAAGCCGCATAAGATG+AGG - chr7.1:73331018-73331037 None:intergenic 45.0%
CTCATCTTATGCGGCTTAGT+AGG + chr7.1:73331016-73331035 MS.gene044969:intron 45.0%
GGTTCCACCATTAGACTTCA+AGG - chr7.1:73332276-73332295 None:intergenic 45.0%
GTCTCCTTGAAGTCTAATGG+TGG + chr7.1:73332269-73332288 MS.gene044969:intron 45.0%
GTCTGAACTCTTAACCCTCA+GGG - chr7.1:73332970-73332989 None:intergenic 45.0%
GTGTCTCTATAGGGACATCT+TGG - chr7.1:73331062-73331081 None:intergenic 45.0%
TAAGCCGCATAAGATGAGGA+GGG - chr7.1:73331014-73331033 None:intergenic 45.0%
TAGACATCATTTGTCAGGGC+CGG - chr7.1:73331410-73331429 None:intergenic 45.0%
TCTACATAATCACCCCGACT+AGG + chr7.1:73332934-73332953 MS.gene044969:CDS 45.0%
TCTGAACTCTTAACCCTCAG+GGG - chr7.1:73332969-73332988 None:intergenic 45.0%
TGTCTGAACTCTTAACCCTC+AGG - chr7.1:73332971-73332990 None:intergenic 45.0%
TGTTGTAATTGGCAAGGGTC+AGG - chr7.1:73333088-73333107 None:intergenic 45.0%
! CCATGTTTTGCATTCGGACA+TGG - chr7.1:73332039-73332058 None:intergenic 45.0%
! GCATTGGTCCTAACTCTTCT+GGG + chr7.1:73332381-73332400 MS.gene044969:CDS 45.0%
! GTTCCTAAGTTTAGGACAGC+AGG - chr7.1:73331938-73331957 None:intergenic 45.0%
! TGCATTGGTCCTAACTCTTC+TGG + chr7.1:73332380-73332399 MS.gene044969:CDS 45.0%
!!! GATGGCCCAACGGATTTTTT+TGG + chr7.1:73330721-73330740 MS.gene044969:intron 45.0%
AAAGGAGATAGGCGGTACCA+TGG - chr7.1:73332573-73332592 None:intergenic 50.0%
AAGGAGATAGGCGGTACCAT+GGG - chr7.1:73332572-73332591 None:intergenic 50.0%
AGGGGGATCATCTTCCTAGT+CGG - chr7.1:73332951-73332970 None:intergenic 50.0%
AGTGGTGATCTGGTAGCAGA+TGG + chr7.1:73330703-73330722 MS.gene044969:intron 50.0%
CAGGGCCGTTCCTATGAAAT+AGG + chr7.1:73331124-73331143 MS.gene044969:intron 50.0%
CCATGTTACTGTCCCCTTTC+AGG + chr7.1:73332120-73332139 MS.gene044969:CDS 50.0%
CCTGAAAGGGGACAGTAACA+TGG - chr7.1:73332123-73332142 None:intergenic 50.0%
CGGATTACGCTCAAGATGTC+CGG - chr7.1:73330673-73330692 None:intergenic 50.0%
CTAAGCCGCATAAGATGAGG+AGG - chr7.1:73331015-73331034 None:intergenic 50.0%
CTGAACTCTTAACCCTCAGG+GGG - chr7.1:73332968-73332987 None:intergenic 50.0%
GCGCACAACGTGAAACACAA+GGG + chr7.1:73330616-73330635 MS.gene044969:intron 50.0%
GGCCGTTCCTATGAAATAGG+AGG + chr7.1:73331127-73331146 MS.gene044969:intron 50.0%
GTTGTGCGCGAAGTGTATAG+CGG - chr7.1:73330605-73330624 None:intergenic 50.0%
TACTCGGACCCAGAAGAGTT+AGG - chr7.1:73332392-73332411 None:intergenic 50.0%
TAGGAAGATGATCCCCCTGA+GGG + chr7.1:73332953-73332972 MS.gene044969:CDS 50.0%
AAGATGTCCGGTTCTCGACG+TGG - chr7.1:73330661-73330680 None:intergenic 55.0%
AGATGTCCGGTTCTCGACGT+GGG - chr7.1:73330660-73330679 None:intergenic 55.0%
AGGAGATAGGCGGTACCATG+GGG - chr7.1:73332571-73332590 None:intergenic 55.0%
ATTTGTCAGGGCCGGACCTT+GGG - chr7.1:73331402-73331421 None:intergenic 55.0%
CGCGCACAACGTGAAACACA+AGG + chr7.1:73330615-73330634 MS.gene044969:intron 55.0%
CTAGGAAGATGATCCCCCTG+AGG + chr7.1:73332952-73332971 MS.gene044969:CDS 55.0%
GGGGATCATCTTCCTAGTCG+GGG - chr7.1:73332949-73332968 None:intergenic 55.0%
GGGGGATCATCTTCCTAGTC+GGG - chr7.1:73332950-73332969 None:intergenic 55.0%
TCAGACGTTGCATGTGCACC+TGG - chr7.1:73333037-73333056 None:intergenic 55.0%
TCTGGTAGCAGATGGCCCAA+CGG + chr7.1:73330711-73330730 MS.gene044969:intron 55.0%
TTCCTGCACTTCCCAAGGTC+CGG + chr7.1:73331388-73331407 MS.gene044969:intron 55.0%
ACCTCGTCCTCCGCCTCATT+GGG + chr7.1:73333129-73333148 MS.gene044969:CDS 60.0%
AGCGCTTCCTGCACTTCCCA+AGG + chr7.1:73331383-73331402 MS.gene044969:intron 60.0%
CACAACCCCACGTCGAGAAC+CGG + chr7.1:73330651-73330670 MS.gene044969:intron 60.0%
CATTTGTCAGGGCCGGACCT+TGG - chr7.1:73331403-73331422 None:intergenic 60.0%
GATGTCCGGTTCTCGACGTG+GGG - chr7.1:73330659-73330678 None:intergenic 60.0%
GGAGATAGGCGGTACCATGG+GGG - chr7.1:73332570-73332589 None:intergenic 60.0%
CAATGAGGCGGAGGACGAGG+TGG - chr7.1:73333130-73333149 None:intergenic 65.0%
CACCTCGTCCTCCGCCTCAT+TGG + chr7.1:73333128-73333147 MS.gene044969:CDS 65.0%
CCTCGTCCTCCGCCTCATTG+GGG + chr7.1:73333130-73333149 MS.gene044969:CDS 65.0%
CCCCAATGAGGCGGAGGACG+AGG - chr7.1:73333133-73333152 None:intergenic 70.0%
GAGGCGGAGGACGAGGTGGA+GGG - chr7.1:73333126-73333145 None:intergenic 70.0%
TGAGGCGGAGGACGAGGTGG+AGG - chr7.1:73333127-73333146 None:intergenic 70.0%
! GGCCGGACCTTGGGAAGTGC+AGG - chr7.1:73331393-73331412 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 73330378 73333157 73330378 ID=MS.gene044969
chr7.1 mRNA 73330378 73333157 73330378 ID=MS.gene044969.t1;Parent=MS.gene044969
chr7.1 exon 73330378 73330458 73330378 ID=MS.gene044969.t1.exon1;Parent=MS.gene044969.t1
chr7.1 CDS 73330378 73330458 73330378 ID=cds.MS.gene044969.t1;Parent=MS.gene044969.t1
chr7.1 exon 73331907 73332254 73331907 ID=MS.gene044969.t1.exon2;Parent=MS.gene044969.t1
chr7.1 CDS 73331907 73332254 73331907 ID=cds.MS.gene044969.t1;Parent=MS.gene044969.t1
chr7.1 exon 73332311 73332574 73332311 ID=MS.gene044969.t1.exon3;Parent=MS.gene044969.t1
chr7.1 CDS 73332311 73332574 73332311 ID=cds.MS.gene044969.t1;Parent=MS.gene044969.t1
chr7.1 exon 73332927 73333157 73332927 ID=MS.gene044969.t1.exon4;Parent=MS.gene044969.t1
chr7.1 CDS 73332927 73333157 73332927 ID=cds.MS.gene044969.t1;Parent=MS.gene044969.t1
Gene Sequence

>MS.gene044969

ATGGAGCCTCTGACGATTTCAAACTCTAAATTGCTTGATTGCTGCAATTGTTTTCAACCTCTAAGTATTCCTGTCTTTCAGGTATGCATTTGATTATATTAATTGTTTTCTACATATGAGAAAATTTAATTTCTTGTCATTTATATGCAATATGTTTCTGGTCATTTATTTTAAATATTTAATACTCTTTTCTAGTATGTTTCAAACATTGTATTCAATAGTGTCCGCTATACACTTCGCGCACAACGTGAAACACAAGGGTATGACTCTTAACACAACCCCACGTCGAGAACCGGACATCTTGAGCGTAATCCGATTGGCTAATAGTGGTGATCTGGTAGCAGATGGCCCAACGGATTTTTTTGGATAGATTTTGATAATATCTTAGGATTTGTGTTGAACCTAACTCAACTTTACAAAACTGACTTGTAAGGTGAGGAATGCCCCCAATTATATACTCATATTTAGGCTTTATTTCATTTAATGCAATTAACGTAGAATTTACTTTAGAGGGTAAAGTAAGTATTATCAACTATTAATTAGAAAATGCATGATGGATATTGAAGGTACATCATTACAATCAAGAGTTTTTGAATTAGCGACACTTGATTTTCTCAATTTAAAGGAGATTTTCCCTCCTCATCTTATGCGGCTTAGTAGGAAACAGAAAAGAATGGAGAACCAAGATGTCCCTATAGAGACACAAAACAATTAGGGAGAAACAGAGATAGATGCATAACAAATGACAGGGCCGTTCCTATGAAATAGGAGGCTCGGTTCTATTTTTAAAATAGGCCCCAGTAAAATCAAAACGCAATTCTTTTTGTGTAGCTAAGCTTTATTAAAAAATCAAAATCAGAAGAACTTTTATACACGAAACAAAACAAAATAAAATTAAGTGAAAGAGAGGTGAAATTTACCTAACAAAATAAAATAGTTTCTTTCAATGGGGGTGAGTATTATAATTTTTTTTAAGGCCCATAGTTTTTAGAGGTTCGGTTCGGTAGCGCTTCCTGCACTTCCCAAGGTCCGGCCCTGACAAATGATGTCTAGTAGTGAAGAGCATGATCATGAATTGATACTATTTTACAAATCACTTTTATTTATTTTAATTGCTTAGATGTGTTTTTTAAGCCTTAGAGGCAAAGACTTGTTTGATTTACATTGGGTTTGAATATAAGTTACAATGATCTCTCATAAATAATGATGAATGTCTTTAATTTTGTATATCCTTCTATTTTTGAGCTTTTATATGGGTATGTTATGAACCTGTATTGTTTCTCTAAACTTTGGTATTGTGGCCATATTGCTACCTGCTATACTGCTATAGTATTTTGGGTGTGAGCTGTAATCCGTCTTTGAGTACATTAATTTTGAGAATAATAAATTAAGAATGATTAGCTTTATGTTTATTATACTTATGATTGCATAACTTGATAACAAGCTTTACAAAAAATCTCTTACTTTATTTGATTCTAGCAAATGGTTCAAAGTTTAATTTGATGGTTTTCTTTTTTGTTGTAATTCAGTGTGATAATGGTCATATTGTTTGCTCTACCTGCTGTCCTAAACTTAGGAACAAGTGTCAGAAGTGCTCGTTGCACATTAGCTCAAAACGTTGTAAAGCCATTGAGAATCTATTGCAATCTATCGAAATGCCATGTCCGAATGCAAAACATGGTTGCAGGGAGAAAATGAGTTACACTGGAAATAGGAAGCATGAAGAAGAATGCATCTATGTGCCATGTTACTGTCCCCTTTCAGGTTGTGACTTTGTTGCAGCATCAGAACTGTTGTCCAACCATTTCAGCCATAAACATGGGGGTTCTCAAATCAAATTTTCTTATGGTCTTTGTTCAAAAAAAAAATTTCTTATGGTCACTCCTTCATTGTCTCCTTGAAGTCTAATGGTGGAACCATTGTTCTTCAAGAGGAAAATGACGGCAAACTATTTATTCTCAATAATGCTACTATGAGTTTGGGAAATGCAGTCAATATTTGCTGCATTGGTCCTAACTCTTCTGGGTCCGAGTATAGTTATGATATATTGGCCAAGTCTGAGATATGCAAACTGAAATTACAGTCTTTTGCGAAGAACGTCCAACAGTTTACTTTAGCAACTCTTTCATCAGAGTTCCTTGTGATTCCATTTCGTTCTTCTGAACCTCTCAAGCTAGAAATTTGCATAACCCCCATGGTACCGCCTATCTCCTTTTCTTTGCTTTTTTTTTTCGTTCCAATTAAAGTCTTATTATTTTCTTTTATGTTTTGAATTTATACTCTAGCATTTTATCTCAAATTCATCGGTTTTGCAAATGCCAAAATAAAGTTGTTTTGTTAGTGTTTTCTATTTTTGTATTTTTGTATCAGTTCTTAAACTATCAGTCTCAAAATTTCTTAAATTGATTTTGATCATGAATTTCTTTTGCCCTGTTGTACTGTAATAAATTTTGCTTTCTTTATGATGCTTTTATCATTGATCAATGTGTTGTTAATTGCGGTGCATATGCAAATATTCTTTTATTGATTTAATGGCAATGGTGCTACAGATGCAAATCTACATAATCACCCCGACTAGGAAGATGATCCCCCTGAGGGTTAAGAGTTCAGACACAGTAGCCAATGTGAAGGAGATGATTTTTGACAAGACACAGTACCAGGTGCACATGCAACGTCTGATCTTTGATGGTAAGCTACTAGATGACAGCCTGACCCTTGCCAATTACAACATACAAGAGAAGTCAACCCTCCACCTCGTCCTCCGCCTCATTGGGGACTAG

Protein sequence

>MS.gene044969.t1

MEPLTISNSKLLDCCNCFQPLSIPVFQCDNGHIVCSTCCPKLRNKCQKCSLHISSKRCKAIENLLQSIEMPCPNAKHGCREKMSYTGNRKHEEECIYVPCYCPLSGCDFVAASELLSNHFSHKHGGSQIKFSYGLCSKKKFLMENDGKLFILNNATMSLGNAVNICCIGPNSSGSEYSYDILAKSEICKLKLQSFAKNVQQFTLATLSSEFLVIPFRSSEPLKLEICITPMMQIYIITPTRKMIPLRVKSSDTVANVKEMIFDKTQYQVHMQRLIFDGKLLDDSLTLANYNIQEKSTLHLVLRLIGD