AlfalfaGEDB | MS.gene21254

M. sativa cultivar XinJiangDaYe / MS.gene21254

KEGG: K04506
GO: GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0019538 GO:0019941 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0046872 GO:0046914 GO:0048856 GO:0051603 GO:0071704 GO:0110165 GO:1901564 GO:1901575
PFAM: PF00240.26 PF03145.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21254.t1	XP_003615393.1	92.7	316	23	0	1	316	1	316	5.30E-169	603.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21254.t1	Q84K34	38.2	241	143	3	3	237	100	340	1.9e-42	174.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21254.t1	G7K621	92.7	316	23	0	1	316	1	316	3.8e-169	603.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene81807	MS.gene21254	PPI
MS.gene017316	MS.gene21254	PPI
MS.gene017309	MS.gene21254	PPI
MS.gene063576	MS.gene21254	PPI
MS.gene023735	MS.gene21254	PPI
MS.gene062461	MS.gene21254	PPI
MS.gene017321	MS.gene21254	PPI
MS.gene21254	MS.gene009564	PPI
MS.gene37878	MS.gene21254	PPI
MS.gene017314	MS.gene21254	PPI
MS.gene68940	MS.gene21254	PPI
MS.gene032536	MS.gene21254	PPI
MS.gene21254	MS.gene53619	PPI
MS.gene053692	MS.gene21254	PPI
MS.gene044969	MS.gene21254	PPI
MS.gene21254	MS.gene74054	PPI
MS.gene92432	MS.gene21254	PPI
MS.gene92433	MS.gene21254	PPI
MS.gene025072	MS.gene21254	PPI
MS.gene52735	MS.gene21254	PPI
MS.gene26198	MS.gene21254	PPI
MS.gene21254	MS.gene023735	PPI
MS.gene009576	MS.gene21254	PPI
MS.gene26202	MS.gene21254	PPI
MS.gene037087	MS.gene21254	PPI
MS.gene21254	MS.gene062459	PPI
MS.gene70750	MS.gene21254	PPI
MS.gene017318	MS.gene21254	PPI
MS.gene26189	MS.gene21254	PPI
MS.gene016802	MS.gene21254	PPI
MS.gene26190	MS.gene21254	PPI
MS.gene053691	MS.gene21254	PPI
MS.gene063584	MS.gene21254	PPI
MS.gene009562	MS.gene21254	PPI
MS.gene21254	MS.gene017300	PPI
MS.gene063581	MS.gene21254	PPI
MS.gene41691	MS.gene21254	PPI
MS.gene063603	MS.gene21254	PPI
MS.gene044971	MS.gene21254	PPI
MS.gene042174	MS.gene21254	PPI
MS.gene72920	MS.gene21254	PPI
MS.gene032535	MS.gene21254	PPI
MS.gene61945	MS.gene21254	PPI
MS.gene25827	MS.gene21254	PPI
MS.gene21254	MS.gene016802	PPI
MS.gene063598	MS.gene21254	PPI
MS.gene21254	MS.gene063596	PPI
MS.gene21254	MS.gene26202	PPI
MS.gene81557	MS.gene21254	PPI
MS.gene21254	MS.gene017337	PPI
MS.gene21254	MS.gene032536	PPI
MS.gene21254	MS.gene025074	PPI
MS.gene063583	MS.gene21254	PPI
MS.gene009566	MS.gene21254	PPI
MS.gene92429	MS.gene21254	PPI
MS.gene21254	MS.gene064974	PPI
MS.gene009577	MS.gene21254	PPI
MS.gene017308	MS.gene21254	PPI
MS.gene010031	MS.gene21254	PPI
MS.gene009573	MS.gene21254	PPI
MS.gene53617	MS.gene21254	PPI
MS.gene94985	MS.gene21254	PPI
MS.gene26186	MS.gene21254	PPI
MS.gene017324	MS.gene21254	PPI
MS.gene21254	MS.gene009573	PPI
MS.gene009560	MS.gene21254	PPI
MS.gene26197	MS.gene21254	PPI
MS.gene063599	MS.gene21254	PPI
MS.gene26191	MS.gene21254	PPI
MS.gene04692	MS.gene21254	PPI
MS.gene73977	MS.gene21254	PPI
MS.gene81818	MS.gene21254	PPI
MS.gene21254	MS.gene94984	PPI
MS.gene21254	MS.gene92427	PPI
MS.gene92435	MS.gene21254	PPI
MS.gene064975	MS.gene21254	PPI
MS.gene64287	MS.gene21254	PPI
MS.gene009564	MS.gene21254	PPI
MS.gene009570	MS.gene21254	PPI
MS.gene063586	MS.gene21254	PPI
MS.gene73973	MS.gene21254	PPI
MS.gene009543	MS.gene21254	PPI
MS.gene21254	MS.gene063586	PPI
MS.gene062462	MS.gene21254	PPI
MS.gene063610	MS.gene21254	PPI
MS.gene009559	MS.gene21254	PPI
MS.gene012651	MS.gene21254	PPI
MS.gene92430	MS.gene21254	PPI
MS.gene044173	MS.gene21254	PPI
MS.gene73975	MS.gene21254	PPI
MS.gene53618	MS.gene21254	PPI
MS.gene063587	MS.gene21254	PPI
MS.gene017337	MS.gene21254	PPI
MS.gene21254	MS.gene063587	PPI
MS.gene025074	MS.gene21254	PPI
MS.gene017315	MS.gene21254	PPI
MS.gene21254	MS.gene063610	PPI
MS.gene74055	MS.gene21254	PPI
MS.gene063596	MS.gene21254	PPI
MS.gene009561	MS.gene21254	PPI
MS.gene009547	MS.gene21254	PPI
MS.gene21254	MS.gene94985	PPI
MS.gene063589	MS.gene21254	PPI
MS.gene53616	MS.gene21254	PPI
MS.gene64288	MS.gene21254	PPI
MS.gene009591	MS.gene21254	PPI
MS.gene39862	MS.gene21254	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21254.t1	MTR_5g067400	92.722	316	23	0	1	316	1	316	0.0	602
MS.gene21254.t1	MTR_1g046640	81.962	316	56	1	1	316	1	315	0.0	526
MS.gene21254.t1	MTR_1g046650	78.797	316	66	1	1	316	32	346	0.0	508
MS.gene21254.t1	MTR_1g046650	78.797	316	66	1	1	316	1	315	0.0	507
MS.gene21254.t1	MTR_7g024290	75.633	316	76	1	1	315	1	316	8.79e-172	479
MS.gene21254.t1	MTR_1g046650	78.007	291	63	1	26	316	26	315	1.48e-164	461
MS.gene21254.t1	MTR_5g076810	83.271	269	44	1	49	316	2	270	5.37e-161	450
MS.gene21254.t1	MTR_7g094390	70.288	313	93	0	3	315	164	476	3.40e-157	448
MS.gene21254.t1	MTR_5g076720	68.038	316	98	1	3	315	74	389	5.10e-155	439
MS.gene21254.t1	MTR_5g076520	69.304	316	93	2	1	312	1	316	1.84e-154	435
MS.gene21254.t1	MTR_5g076660	67.732	313	98	1	4	313	26	338	1.56e-148	421
MS.gene21254.t1	MTR_5g061290	63.208	318	109	3	4	315	11	326	2.92e-142	404
MS.gene21254.t1	MTR_2g038420	63.722	317	110	2	4	315	18	334	1.73e-140	400
MS.gene21254.t1	MTR_2g038430	62.769	325	108	2	4	315	18	342	5.86e-140	399
MS.gene21254.t1	MTR_5g076505	68.493	292	89	1	27	315	23	314	1.36e-139	397
MS.gene21254.t1	MTR_5g076820	73.571	280	66	5	1	275	10	286	2.41e-139	396
MS.gene21254.t1	MTR_5g076370	63.694	314	110	2	4	313	26	339	3.28e-139	397
MS.gene21254.t1	MTR_1g046650	76.113	247	58	1	70	316	1	246	2.21e-134	381
MS.gene21254.t1	MTR_5g076540	76.754	228	53	0	1	228	1	228	3.96e-125	358
MS.gene21254.t1	MTR_5g077020	66.667	198	53	4	53	241	17	210	1.49e-81	246
MS.gene21254.t1	MTR_4g094468	47.639	233	117	3	5	234	91	321	8.50e-69	218
MS.gene21254.t1	MTR_4g058025	73.810	126	32	1	68	192	1	126	1.05e-56	182
MS.gene21254.t1	MTR_7g085590	29.464	224	141	4	6	225	58	268	1.98e-28	111
MS.gene21254.t1	MTR_7g105080	68.421	76	24	0	241	316	1	76	6.20e-27	102
MS.gene21254.t1	MTR_3g092130	68.421	76	24	0	241	316	1	76	6.20e-27	102
MS.gene21254.t1	MTR_1g059690	68.421	76	24	0	241	316	1	76	6.20e-27	102
MS.gene21254.t1	MTR_5g092700	68.421	76	24	0	241	316	1	76	8.15e-27	103
MS.gene21254.t1	MTR_5g092700	47.297	74	39	0	243	316	79	152	2.22e-14	70.1
MS.gene21254.t1	MTR_4g073580	68.421	76	24	0	241	316	1	76	8.15e-27	103
MS.gene21254.t1	MTR_4g073580	47.297	74	39	0	243	316	79	152	2.22e-14	70.1
MS.gene21254.t1	MTR_8g088060	68.421	76	24	0	241	316	1	76	8.70e-27	103
MS.gene21254.t1	MTR_3g092130	68.421	76	24	0	241	316	1	76	8.86e-27	102
MS.gene21254.t1	MTR_5g033960	68.421	76	24	0	241	316	1	76	9.56e-27	103
MS.gene21254.t1	MTR_4g073580	68.421	76	24	0	241	316	1	76	2.17e-26	103
MS.gene21254.t1	MTR_4g088485	68.421	76	24	0	241	316	1	76	2.57e-26	103
MS.gene21254.t1	MTR_4g088485	68.421	76	24	0	241	316	138	213	2.57e-26	103
MS.gene21254.t1	MTR_4g088485	53.947	76	20	1	241	316	77	137	2.23e-16	77.0
MS.gene21254.t1	MTR_7g116360	68.421	76	24	0	241	316	1	76	3.05e-26	103
MS.gene21254.t1	MTR_7g116360	68.421	76	24	0	241	316	77	152	3.05e-26	103
MS.gene21254.t1	MTR_7g116360	68.421	76	24	0	241	316	153	228	3.05e-26	103
MS.gene21254.t1	MTR_1g066390	68.421	76	24	0	241	316	1	76	4.02e-26	103
MS.gene21254.t1	MTR_1g066390	68.421	76	24	0	241	316	77	152	4.02e-26	103
MS.gene21254.t1	MTR_1g066390	68.421	76	24	0	241	316	153	228	4.02e-26	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	1	76	7.50e-26	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	77	152	7.50e-26	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	153	228	7.50e-26	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	1	76	1.08e-25	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	77	152	1.08e-25	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	153	228	1.08e-25	103
MS.gene21254.t1	MTR_7g116360	68.421	76	24	0	241	316	49	124	1.10e-25	103
MS.gene21254.t1	MTR_7g116360	68.421	76	24	0	241	316	125	200	1.10e-25	103
MS.gene21254.t1	MTR_7g116360	68.421	76	24	0	241	316	201	276	1.10e-25	103
MS.gene21254.t1	MTR_4g080920	67.105	76	25	0	241	316	77	152	1.12e-25	102
MS.gene21254.t1	MTR_4g080920	67.105	76	25	0	241	316	1	76	2.16e-25	102
MS.gene21254.t1	MTR_4g080920	53.947	76	35	0	241	316	153	228	1.07e-18	83.6
MS.gene21254.t1	MTR_6g061930	68.421	76	24	0	241	316	1	76	1.18e-25	103
MS.gene21254.t1	MTR_6g061930	68.421	76	24	0	241	316	77	152	1.18e-25	103
MS.gene21254.t1	MTR_6g061930	68.421	76	24	0	241	316	214	289	1.18e-25	103
MS.gene21254.t1	MTR_6g061930	52.632	76	21	1	241	316	153	213	4.83e-15	74.7
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	1	76	1.52e-25	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	77	152	1.52e-25	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	153	228	1.52e-25	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	229	304	1.52e-25	103
MS.gene21254.t1	MTR_4g080797	68.421	76	24	0	241	316	1	76	4.30e-25	103
MS.gene21254.t1	MTR_4g080797	68.421	76	24	0	241	316	77	152	4.30e-25	103
MS.gene21254.t1	MTR_4g080797	68.421	76	24	0	241	316	153	228	4.30e-25	103
MS.gene21254.t1	MTR_4g080797	68.421	76	24	0	241	316	229	304	4.30e-25	103
MS.gene21254.t1	MTR_4g080797	68.421	76	24	0	241	316	305	380	4.30e-25	103
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	1	76	4.30e-25	103
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	77	152	4.30e-25	103
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	153	228	4.30e-25	103
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	305	380	4.30e-25	103
MS.gene21254.t1	MTR_4g091580	67.105	76	25	0	241	316	229	304	1.51e-24	102
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	1	76	4.30e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	77	152	4.30e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	153	228	4.30e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	229	304	4.30e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	305	380	4.30e-25	103
MS.gene21254.t1	MTR_8g081020	68.421	76	24	0	241	316	1	76	4.61e-25	103
MS.gene21254.t1	MTR_8g081020	68.421	76	24	0	241	316	77	152	4.61e-25	103
MS.gene21254.t1	MTR_8g081020	68.421	76	24	0	241	316	153	228	4.61e-25	103
MS.gene21254.t1	MTR_8g081020	68.421	76	24	0	241	316	229	304	4.61e-25	103
MS.gene21254.t1	MTR_8g081020	68.421	76	24	0	241	316	305	380	4.61e-25	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	1	76	4.65e-25	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	77	152	4.65e-25	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	153	228	4.65e-25	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	229	304	4.65e-25	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	305	380	4.65e-25	103
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	305	380	6.33e-25	105
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	1	76	1.43e-24	103
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	77	152	1.43e-24	103
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	153	228	1.43e-24	103
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	229	304	1.43e-24	103
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	381	456	1.43e-24	103
MS.gene21254.t1	MTR_4g091580	68.421	76	24	0	241	316	457	532	1.43e-24	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	1	76	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	77	152	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	153	228	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	229	304	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	305	380	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	381	456	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	1	76	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	77	152	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	153	228	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	229	304	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	305	380	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	381	456	8.98e-25	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	1	76	1.35e-24	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	77	152	1.35e-24	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	153	228	1.35e-24	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	229	304	1.35e-24	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	305	380	1.35e-24	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	381	456	1.35e-24	103
MS.gene21254.t1	MTR_8g018230	68.421	76	24	0	241	316	457	532	1.35e-24	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	1	76	1.44e-24	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	77	152	1.44e-24	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	153	228	1.44e-24	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	229	304	1.44e-24	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	305	380	1.44e-24	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	381	456	1.44e-24	103
MS.gene21254.t1	MTR_4g081010	68.421	76	24	0	241	316	457	532	1.44e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	77	152	2.23e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	153	228	2.23e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	229	304	2.23e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	305	380	2.23e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	381	456	2.23e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	457	532	2.23e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	533	608	2.23e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	609	684	2.23e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	685	760	2.23e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	761	836	2.23e-24	103
MS.gene21254.t1	MTR_4g088495	68.421	76	24	0	241	316	1	76	2.45e-24	103
MS.gene21254.t1	MTR_5g061310	58.442	77	32	0	240	316	1	77	3.79e-22	88.6
MS.gene21254.t1	MTR_8g479250	62.791	86	32	0	231	316	131	216	6.82e-21	91.3
MS.gene21254.t1	MTR_8g479250	54.167	72	22	1	241	312	217	277	5.11e-15	74.7
MS.gene21254.t1	MTR_5g076740	58.667	75	28	2	241	312	86	160	1.19e-18	82.0
MS.gene21254.t1	MTR_3g017590	25.714	210	146	4	11	210	53	262	2.77e-18	84.0
MS.gene21254.t1	MTR_5g076760	64.912	57	20	0	251	307	5	61	3.69e-18	78.2
MS.gene21254.t1	MTR_8g038370	26.667	210	144	4	11	210	112	321	4.67e-18	84.0
MS.gene21254.t1	MTR_1g054335	27.014	211	144	4	10	210	57	267	1.18e-17	82.4
MS.gene21254.t1	MTR_3g091510	27.273	209	142	4	11	209	60	268	2.75e-17	81.3
MS.gene21254.t1	MTR_7g117415	26.728	217	149	4	3	209	53	269	5.21e-17	80.5
MS.gene21254.t1	MTR_7g093600	25.514	243	162	5	10	233	58	300	1.26e-16	79.3
MS.gene21254.t1	MTR_8g027520	27.650	217	147	5	3	209	45	261	1.57e-16	79.3
MS.gene21254.t1	MTR_8g027520	27.650	217	147	5	3	209	36	252	2.05e-16	78.6
MS.gene21254.t1	MTR_1g008120	33.083	133	86	2	11	140	68	200	3.82e-16	78.2
MS.gene21254.t1	MTR_5g076340	53.333	75	33	2	241	313	9	83	6.57e-16	72.0
MS.gene21254.t1	MTR_5g076780	56.667	60	26	0	254	313	3	62	7.98e-16	71.2
MS.gene21254.t1	MTR_5g076350	51.351	74	35	1	241	313	8	81	9.46e-16	71.6
MS.gene21254.t1	MTR_4g009980	45.455	66	36	0	250	315	5	70	1.24e-13	65.5
MS.gene21254.t1	MTR_5g076750	56.250	48	21	0	265	312	17	64	4.12e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21254.t1	AT5G37930	38.462	234	140	2	8	237	107	340	9.82e-51	171
MS.gene21254.t1	AT1G66620	35.169	236	144	4	10	237	40	274	1.73e-42	149
MS.gene21254.t1	AT5G37870	36.000	225	139	5	5	224	36	260	2.59e-41	145
MS.gene21254.t1	AT5G37890	34.649	228	137	4	5	224	42	265	1.51e-39	140
MS.gene21254.t1	AT1G66650	34.632	231	140	6	4	224	76	305	2.31e-37	136
MS.gene21254.t1	AT5G37910	33.032	221	142	3	10	224	34	254	4.28e-35	129
MS.gene21254.t1	AT1G66630	34.081	223	140	4	10	225	45	267	2.79e-34	127
MS.gene21254.t1	AT1G66660	33.065	248	154	7	2	238	94	340	7.52e-33	124
MS.gene21254.t1	AT5G62800	34.234	222	139	5	10	224	39	260	1.50e-32	123
MS.gene21254.t1	AT5G62800	34.234	222	139	5	10	224	39	260	2.44e-32	123
MS.gene21254.t1	AT2G47110	68.421	76	24	0	241	316	1	76	4.81e-27	104
MS.gene21254.t1	AT2G47110	68.421	76	24	0	241	316	1	76	4.81e-27	104
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	1	76	4.90e-27	103
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	77	152	4.90e-27	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	1	76	4.90e-27	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	77	152	4.90e-27	103
MS.gene21254.t1	AT3G62250	68.421	76	24	0	241	316	1	76	5.81e-27	103
MS.gene21254.t1	AT1G23410	68.421	76	24	0	241	316	1	76	7.05e-27	103
MS.gene21254.t1	AT3G52590	68.421	76	24	0	241	316	1	76	7.60e-27	102
MS.gene21254.t1	AT2G36170	68.421	76	24	0	241	316	1	76	7.60e-27	102
MS.gene21254.t1	AT1G31340	68.421	76	24	0	241	316	1	76	8.61e-27	103
MS.gene21254.t1	AT1G31340	47.297	74	39	0	243	316	79	152	2.29e-14	70.1
MS.gene21254.t1	AT2G35635	68.421	76	24	0	241	316	1	76	8.87e-27	103
MS.gene21254.t1	AT2G35635	45.946	74	40	0	243	316	79	152	2.70e-13	67.0
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	1	76	3.19e-26	103
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	77	152	3.19e-26	103
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	153	228	3.19e-26	103
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	1	76	3.19e-26	103
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	77	152	3.19e-26	103
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	153	228	3.19e-26	103
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	1	76	3.19e-26	103
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	77	152	3.19e-26	103
MS.gene21254.t1	AT4G05050	68.421	76	24	0	241	316	153	228	3.19e-26	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	1	76	3.19e-26	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	77	152	3.19e-26	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	153	228	3.19e-26	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	1	76	3.19e-26	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	77	152	3.19e-26	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	153	228	3.19e-26	103
MS.gene21254.t1	AT1G55060	67.105	76	25	0	241	316	77	152	1.34e-25	102
MS.gene21254.t1	AT1G55060	65.789	76	26	0	241	316	153	228	1.00e-23	97.4
MS.gene21254.t1	AT1G55060	63.158	76	28	0	241	316	1	76	1.86e-23	96.7
MS.gene21254.t1	AT1G65350	68.421	76	24	0	241	316	1	76	1.40e-25	104
MS.gene21254.t1	AT1G65350	67.105	76	25	0	241	316	152	227	1.84e-24	101
MS.gene21254.t1	AT1G65350	67.105	76	24	1	241	316	77	151	1.00e-22	96.7
MS.gene21254.t1	AT1G65350	53.333	90	28	1	241	316	228	317	6.22e-18	83.2
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	1	76	1.49e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	77	152	1.49e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	153	228	1.49e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	229	304	1.49e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	1	76	1.49e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	77	152	1.49e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	153	228	1.49e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	229	304	1.49e-25	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	1	76	1.49e-25	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	77	152	1.49e-25	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	153	228	1.49e-25	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	229	304	1.49e-25	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	1	76	1.49e-25	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	77	152	1.49e-25	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	153	228	1.49e-25	103
MS.gene21254.t1	AT4G02890	68.421	76	24	0	241	316	229	304	1.49e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	1	76	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	77	152	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	153	228	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	229	304	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	1	76	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	77	152	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	153	228	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	229	304	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	1	76	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	77	152	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	153	228	1.58e-25	103
MS.gene21254.t1	AT5G03240	68.421	76	24	0	241	316	229	304	1.58e-25	103
MS.gene21254.t1	AT5G20620	68.421	76	24	0	241	316	1	76	1.58e-25	103
MS.gene21254.t1	AT5G20620	68.421	76	24	0	241	316	77	152	1.58e-25	103
MS.gene21254.t1	AT5G20620	68.421	76	24	0	241	316	153	228	1.58e-25	103
MS.gene21254.t1	AT5G20620	68.421	76	24	0	241	316	229	304	1.58e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	1	76	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	77	152	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	153	228	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	229	304	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	305	380	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	1	76	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	77	152	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	153	228	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	229	304	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	305	380	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	1	76	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	77	152	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	153	228	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	229	304	4.50e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	305	380	4.50e-25	103
MS.gene21254.t1	AT5G20620	68.421	76	24	0	241	316	1	76	4.55e-25	103
MS.gene21254.t1	AT5G20620	68.421	76	24	0	241	316	77	152	4.55e-25	103
MS.gene21254.t1	AT5G20620	68.421	76	24	0	241	316	153	228	4.55e-25	103
MS.gene21254.t1	AT5G20620	68.421	76	24	0	241	316	229	304	4.55e-25	103
MS.gene21254.t1	AT5G20620	68.421	76	24	0	241	316	305	380	4.55e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	1	76	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	77	152	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	153	228	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	229	304	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	305	380	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	381	456	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	1	76	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	77	152	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	153	228	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	229	304	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	305	380	9.41e-25	103
MS.gene21254.t1	AT4G05320	68.421	76	24	0	241	316	381	456	9.41e-25	103
MS.gene21254.t1	AT5G37640	65.789	76	26	0	241	316	79	154	1.25e-24	102
MS.gene21254.t1	AT5G37640	65.789	76	26	0	241	316	155	230	2.30e-22	95.5
MS.gene21254.t1	AT5G37640	59.211	76	31	0	241	316	3	78	2.44e-19	87.4
MS.gene21254.t1	AT5G37640	62.338	77	28	1	241	316	231	307	3.22e-19	87.0
MS.gene21254.t1	AT3G09790	65.789	76	26	0	241	316	79	154	8.80e-22	96.3
MS.gene21254.t1	AT3G09790	60.526	76	30	0	241	316	3	78	3.41e-20	91.7
MS.gene21254.t1	AT3G09790	56.757	74	32	0	241	314	552	625	2.96e-16	79.7
MS.gene21254.t1	AT3G09790	52.439	82	32	2	241	315	155	236	1.41e-13	71.6
MS.gene21254.t1	AT3G09790	50.633	79	34	1	241	314	238	316	1.05e-12	68.9
MS.gene21254.t1	AT3G09790	50.000	76	37	1	241	315	393	468	4.16e-12	67.4
MS.gene21254.t1	AT3G09790	51.316	76	35	1	241	314	319	394	1.97e-11	65.1
MS.gene21254.t1	AT3G09790	48.193	83	36	1	241	316	469	551	9.47e-11	63.2
MS.gene21254.t1	AT3G09790	65.789	76	26	0	241	316	79	154	8.80e-22	96.3
MS.gene21254.t1	AT3G09790	60.526	76	30	0	241	316	3	78	3.41e-20	91.7
MS.gene21254.t1	AT3G09790	56.757	74	32	0	241	314	552	625	2.96e-16	79.7
MS.gene21254.t1	AT3G09790	52.439	82	32	2	241	315	155	236	1.41e-13	71.6
MS.gene21254.t1	AT3G09790	50.633	79	34	1	241	314	238	316	1.05e-12	68.9
MS.gene21254.t1	AT3G09790	50.000	76	37	1	241	315	393	468	4.16e-12	67.4
MS.gene21254.t1	AT3G09790	51.316	76	35	1	241	314	319	394	1.97e-11	65.1
MS.gene21254.t1	AT3G09790	48.193	83	36	1	241	316	469	551	9.47e-11	63.2
MS.gene21254.t1	AT1G53930	56.757	74	32	0	240	313	85	158	2.25e-18	81.3
MS.gene21254.t1	AT1G66610	29.586	169	116	3	59	224	166	334	3.25e-17	81.6
MS.gene21254.t1	AT1G66610	48.438	64	33	0	10	73	52	115	5.05e-13	69.3
MS.gene21254.t1	AT4G27880	27.751	209	141	4	11	209	61	269	3.74e-17	81.3
MS.gene21254.t1	AT3G61790	31.915	141	93	2	3	140	52	192	2.76e-16	78.6
MS.gene21254.t1	AT3G58040	25.620	242	161	5	11	233	57	298	3.18e-16	78.2
MS.gene21254.t1	AT3G58040	25.620	242	161	5	11	233	57	298	3.18e-16	78.2
MS.gene21254.t1	AT2G41980	25.207	242	162	5	11	233	54	295	2.07e-15	75.9
MS.gene21254.t1	AT1G66660	29.442	197	127	6	53	238	21	216	2.16e-15	74.3
MS.gene21254.t1	AT3G58040	30.075	133	90	2	11	140	57	189	1.68e-14	72.0
MS.gene21254.t1	AT1G11980	44.000	75	42	0	241	315	1	75	1.77e-13	65.5
MS.gene21254.t1	AT1G53950	39.773	88	49	1	228	311	52	139	1.91e-13	67.0
MS.gene21254.t1	AT5G37900	23.982	221	130	4	10	224	31	219	3.74e-13	68.6
MS.gene21254.t1	AT1G66610	45.833	72	39	0	6	77	153	224	4.65e-13	68.2
MS.gene21254.t1	AT1G66610	48.438	64	33	0	10	73	52	115	8.15e-13	67.4

Find 69 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCATGTTACTGCCCTCTTTC+TGG	0.062246	5.1:+52279125	MS.gene21254:CDS
CTTGACTATTCCCGTCTTTC+AGG	0.122055	5.1:+52277915	MS.gene21254:CDS
TTGCAGCAATCAAGCAAATT+AGG	0.143035	5.1:-52277880	None:intergenic
CAATAATAGAACCACACTTT+TGG	0.274579	5.1:+52279313	MS.gene21254:CDS
TGCAGCAATCAAGCAAATTA+GGG	0.339740	5.1:-52277879	None:intergenic
GAGCTGCTTGTGATTCCATT+TGG	0.360591	5.1:+52279485	MS.gene21254:CDS
AATACCTTTCAGTGTGATAA+TGG	0.362851	5.1:+52278900	MS.gene21254:intron
CTTCTCTTGGATGTTGTAAC+TGG	0.369823	5.1:-52279949	None:intergenic
CACCTCATCCTCCGCCTCCA+TGG	0.371334	5.1:+52279981	MS.gene21254:CDS
CGAGTATAGTTACGAAATAT+TGG	0.376843	5.1:+52279382	MS.gene21254:CDS
GGTGGATGGCTGACTTCTCT+TGG	0.412287	5.1:-52279962	None:intergenic
TTAGACGTTGCTCGTGCATT+GGG	0.414507	5.1:-52279887	None:intergenic
ACCTCATCCTCCGCCTCCAT+GGG	0.415695	5.1:+52279982	MS.gene21254:CDS
TCCCATGGAGGCGGAGGATG+AGG	0.435140	5.1:-52279983	None:intergenic
ATTAGACGTTGCTCGTGCAT+TGG	0.443672	5.1:-52279888	None:intergenic
GCAAAGTCACAACCAGAAAG+AGG	0.454849	5.1:-52279137	None:intergenic
TGCTGGTCAGCTAGCTCCCA+TGG	0.467796	5.1:-52279998	None:intergenic
GGGGAATCGTCTTTCCAGTC+AGG	0.471810	5.1:-52279800	None:intergenic
TGTCTGAACTCTCAACCCTC+AGG	0.486607	5.1:-52279821	None:intergenic
CAATATTTCGTAACTATACT+CGG	0.488179	5.1:-52279381	None:intergenic
GCTCCTAAGTTTAGTACAGC+AGG	0.503795	5.1:-52278940	None:intergenic
CTACCTGCTGTACTAAACTT+AGG	0.508269	5.1:+52278937	MS.gene21254:CDS
GGAGTCAATATATGCTGCAT+TGG	0.513885	5.1:+52279341	MS.gene21254:CDS
AGAGGTTCAGAAGAACCAAA+TGG	0.514036	5.1:-52279500	None:intergenic
TACTCGGACTCAGAAGAGTT+GGG	0.518669	5.1:-52279365	None:intergenic
TCAGCTAGCTCCCATGGAGG+CGG	0.520530	5.1:-52279992	None:intergenic
CTTGGATGTTGTAACTGGCA+AGG	0.524444	5.1:-52279944	None:intergenic
GTCTGAACTCTCAACCCTCA+GGG	0.528767	5.1:-52279820	None:intergenic
AAAGTGTGGTTCTATTATTG+AGG	0.528774	5.1:-52279310	None:intergenic
GCTAGCTCCCATGGAGGCGG+AGG	0.530440	5.1:-52279989	None:intergenic
AAAATGCATACCTGAAAGAC+GGG	0.531395	5.1:-52277925	None:intergenic
ATACTCGGACTCAGAAGAGT+TGG	0.531863	5.1:-52279366	None:intergenic
AAGAAGATTCTTGACATGGA+AGG	0.536829	5.1:+52279861	MS.gene21254:CDS
CAAAGTCACAACCAGAAAGA+GGG	0.537978	5.1:-52279136	None:intergenic
TGAAACCATTGTTCTTCAAG+AGG	0.538905	5.1:+52279265	MS.gene21254:CDS
AGAAGATTCTTGACATGGAA+GGG	0.543905	5.1:+52279862	MS.gene21254:CDS
TTGGATGTTGTAACTGGCAA+GGG	0.546961	5.1:-52279943	None:intergenic
GCAATCAAGCAAATTAGGGT+TGG	0.551048	5.1:-52277875	None:intergenic
AGTTTCCTCTTGAAGAACAA+TGG	0.554557	5.1:-52279270	None:intergenic
ATCACAAGCAGCTCTGATGA+AGG	0.558642	5.1:-52279476	None:intergenic
GAAAATGCATACCTGAAAGA+CGG	0.560897	5.1:-52277926	None:intergenic
GAGGCGGAGGATGAGGTGGA+TGG	0.565313	5.1:-52279976	None:intergenic
AGATAGCAATAGATTCTCAA+TGG	0.569736	5.1:-52279009	None:intergenic
CTGAAAGACGGGAATAGTCA+AGG	0.570795	5.1:-52277914	None:intergenic
GACTCCATTTCCCAAAAGTG+TGG	0.578805	5.1:-52279324	None:intergenic
ATGCAAGTATCTAGCTTGAG+AGG	0.582537	5.1:-52279518	None:intergenic
AAATGCAAAACATGGTTGCA+AGG	0.587331	5.1:+52279049	MS.gene21254:CDS
CCAGAAAGAGGGCAGTAACA+TGG	0.591493	5.1:-52279125	None:intergenic
TGGAAAGACGATTCCCCTGA+GGG	0.592671	5.1:+52279806	MS.gene21254:CDS
CATGGAGGCGGAGGATGAGG+TGG	0.593120	5.1:-52279980	None:intergenic
TGTTGTAACTGGCAAGGGTA+CGG	0.600302	5.1:-52279938	None:intergenic
ATAGTTACGAAATATTGGCT+AGG	0.603327	5.1:+52279387	MS.gene21254:CDS
GTTCTTCAAGAGGAAACTGA+GGG	0.606511	5.1:+52279275	MS.gene21254:CDS
TGAAAGACGGGAATAGTCAA+GGG	0.607822	5.1:-52277913	None:intergenic
AAGGAGAAAATAAGTTACAC+TGG	0.610981	5.1:+52279068	MS.gene21254:CDS
AGACTTCAAAGAGACAATGA+AGG	0.614201	5.1:-52279237	None:intergenic
AAAGAGGGCAGTAACATGGT+AGG	0.619450	5.1:-52279121	None:intergenic
TTAGGGTTGGAAATCATCAA+AGG	0.620519	5.1:-52277862	None:intergenic
GAAGAAGAAGATTCTTGACA+TGG	0.620600	5.1:+52279857	MS.gene21254:CDS
ATCTACGTAGAAGACCTGAC+TGG	0.622712	5.1:+52279786	MS.gene21254:CDS
GAGTTGCTAAAGTAACCTGT+TGG	0.623209	5.1:-52279454	None:intergenic
AGATACTTGCATAACTCCCA+TGG	0.638034	5.1:+52279529	MS.gene21254:CDS
TGTTCTTCAAGAGGAAACTG+AGG	0.641132	5.1:+52279274	MS.gene21254:CDS
CTGGAAAGACGATTCCCCTG+AGG	0.658150	5.1:+52279805	MS.gene21254:CDS
TCTGAACTCTCAACCCTCAG+GGG	0.668577	5.1:-52279819	None:intergenic
CAACGACGGTAAGCAACTAG+AGG	0.673524	5.1:+52279911	MS.gene21254:CDS
TCATGTCCAAATGCAAAACA+TGG	0.717946	5.1:+52279041	MS.gene21254:CDS
TGGTCAGCTAGCTCCCATGG+AGG	0.724865	5.1:-52279995	None:intergenic
GAGCAACGTCTAATCAACGA+CGG	0.760596	5.1:+52279897	MS.gene21254:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATTAAAGATAAATATTAG+AGG	+	chr5.1:52278352-52278371	MS.gene21254:intron	10.0%
!!!	TCTTATTTTATTTTAACAAA+TGG	+	chr5.1:52278841-52278860	MS.gene21254:intron	10.0%
!!!	TCTTTAATTTTCTAATTATT+AGG	-	chr5.1:52278342-52278361	None:intergenic	10.0%
!!	GAAAATAACAAAAATGTAAT+TGG	-	chr5.1:52279603-52279622	None:intergenic	15.0%
!!	TTTAATGTAATTATATGTGT+CGG	+	chr5.1:52278091-52278110	MS.gene21254:intron	15.0%
!!!	ATTTTCTTTTACTGATTTAA+TGG	+	chr5.1:52279743-52279762	MS.gene21254:intron	15.0%
!!	AAAACAAACAAACAAAGAAA+AGG	-	chr5.1:52279567-52279586	None:intergenic	20.0%
!!!	AAGAATGATTAGCTTTATAT+TGG	+	chr5.1:52278772-52278791	MS.gene21254:intron	20.0%
!!!	ATTTTCTTAGAATTTGTGTT+GGG	+	chr5.1:52278229-52278248	MS.gene21254:intron	20.0%
!!!	TATTTTCTTAGAATTTGTGT+TGG	+	chr5.1:52278228-52278247	MS.gene21254:intron	20.0%
!!!	TTGTTAGTGTTTTCTATTTT+TGG	+	chr5.1:52279694-52279713	MS.gene21254:intron	20.0%
!	AAAATAAGAGATTCATTGCA+AGG	-	chr5.1:52278830-52278849	None:intergenic	25.0%
!	CAATATTTCGTAACTATACT+CGG	-	chr5.1:52279384-52279403	None:intergenic	25.0%
!	CTAGATATGAGTAAATAAGT+GGG	-	chr5.1:52278273-52278292	None:intergenic	25.0%
!	GTAAAAACTCAAAAGTAGAA+GGG	-	chr5.1:52278669-52278688	None:intergenic	25.0%
!	TAGATATGAGTAAATAAGTG+GGG	-	chr5.1:52278272-52278291	None:intergenic	25.0%
!	TGTAAAAACTCAAAAGTAGA+AGG	-	chr5.1:52278670-52278689	None:intergenic	25.0%
!!	AATAATAGAACCACACTTTT+GGG	+	chr5.1:52279314-52279333	MS.gene21254:CDS	25.0%
!!!	TACTGATTTAATGGTATTTG+TGG	+	chr5.1:52279752-52279771	MS.gene21254:intron	25.0%
!!!	TTTGAGTTTTTACATGTGTA+TGG	+	chr5.1:52278676-52278695	MS.gene21254:intron	25.0%
!!!	TTTTTGAAATGCCAAAACTA+AGG	+	chr5.1:52279671-52279690	MS.gene21254:intron	25.0%
	AAACAGAGATAGATGCATAA+CGG	+	chr5.1:52278552-52278571	MS.gene21254:intron	30.0%
	AAGGAGAAAATAAGTTACAC+TGG	+	chr5.1:52279068-52279087	MS.gene21254:CDS	30.0%
	AATACCTTTCAGTGTGATAA+TGG	+	chr5.1:52278900-52278919	MS.gene21254:intron	30.0%
	ACAAACAAAGAAAAGGAGAT+AGG	-	chr5.1:52279560-52279579	None:intergenic	30.0%
	AGATAGCAATAGATTCTCAA+TGG	-	chr5.1:52279012-52279031	None:intergenic	30.0%
	AGATATGAGTAAATAAGTGG+GGG	-	chr5.1:52278271-52278290	None:intergenic	30.0%
	CCACTTATTTACTCATATCT+AGG	+	chr5.1:52278271-52278290	MS.gene21254:intron	30.0%
	CCTAGATATGAGTAAATAAG+TGG	-	chr5.1:52278274-52278293	None:intergenic	30.0%
	CGAGTATAGTTACGAAATAT+TGG	+	chr5.1:52279382-52279401	MS.gene21254:CDS	30.0%
	GGTTGCTATATCAAAGTTTA+GGG	-	chr5.1:52278723-52278742	None:intergenic	30.0%
	TGGTTGCTATATCAAAGTTT+AGG	-	chr5.1:52278724-52278743	None:intergenic	30.0%
!	AAAGTGTGGTTCTATTATTG+AGG	-	chr5.1:52279313-52279332	None:intergenic	30.0%
!	AACACTAACAACCTTAGTTT+TGG	-	chr5.1:52279685-52279704	None:intergenic	30.0%
!	AAGTGTTTTGTGTCTCTATA+GGG	-	chr5.1:52278526-52278545	None:intergenic	30.0%
!	ATAGTTACGAAATATTGGCT+AGG	+	chr5.1:52279387-52279406	MS.gene21254:CDS	30.0%
!	CAATAATAGAACCACACTTT+TGG	+	chr5.1:52279313-52279332	MS.gene21254:CDS	30.0%
!	TCTCGGATCAAATTTTCTTA+TGG	+	chr5.1:52279209-52279228	MS.gene21254:CDS	30.0%
	AAAATGCATACCTGAAAGAC+GGG	-	chr5.1:52277928-52277947	None:intergenic	35.0%
	AAATGCAAAACATGGTTGCA+AGG	+	chr5.1:52279049-52279068	MS.gene21254:CDS	35.0%
	AACAAAGAAAAGGAGATAGG+AGG	-	chr5.1:52279557-52279576	None:intergenic	35.0%
	AACCATTTCAGCCAAAAACA+TGG	+	chr5.1:52279182-52279201	MS.gene21254:CDS	35.0%
	AAGAAGATTCTTGACATGGA+AGG	+	chr5.1:52279861-52279880	MS.gene21254:CDS	35.0%
	ACCATTTCAGCCAAAAACAT+GGG	+	chr5.1:52279183-52279202	MS.gene21254:CDS	35.0%
	AGAAGATTCTTGACATGGAA+GGG	+	chr5.1:52279862-52279881	MS.gene21254:CDS	35.0%
	AGACTTCAAAGAGACAATGA+AGG	-	chr5.1:52279240-52279259	None:intergenic	35.0%
	AGTTTCCTCTTGAAGAACAA+TGG	-	chr5.1:52279273-52279292	None:intergenic	35.0%
	ATAGAGACACAAAACACTTG+AGG	+	chr5.1:52278527-52278546	MS.gene21254:intron	35.0%
	ATGACCATTATCACACTGAA+AGG	-	chr5.1:52278907-52278926	None:intergenic	35.0%
	CTCTAACAACTTATTCATCG+TGG	-	chr5.1:52278604-52278623	None:intergenic	35.0%
	CTCTGTATTCAATAGTGTCA+CGG	+	chr5.1:52278006-52278025	MS.gene21254:intron	35.0%
	GAAAATGCATACCTGAAAGA+CGG	-	chr5.1:52277929-52277948	None:intergenic	35.0%
	GAAGAAGAAGATTCTTGACA+TGG	+	chr5.1:52279857-52279876	MS.gene21254:CDS	35.0%
	TAGAATTTGTGTTGGGCATA+AGG	+	chr5.1:52278236-52278255	MS.gene21254:intron	35.0%
	TCATGTCCAAATGCAAAACA+TGG	+	chr5.1:52279041-52279060	MS.gene21254:CDS	35.0%
	TGAAACCATTGTTCTTCAAG+AGG	+	chr5.1:52279265-52279284	MS.gene21254:CDS	35.0%
	TGCAGCAATCAAGCAAATTA+GGG	-	chr5.1:52277882-52277901	None:intergenic	35.0%
	TTAGGGTTGGAAATCATCAA+AGG	-	chr5.1:52277865-52277884	None:intergenic	35.0%
	TTATCAACAGTACCTTCGTA+CGG	-	chr5.1:52278053-52278072	None:intergenic	35.0%
	TTGCAGCAATCAAGCAAATT+AGG	-	chr5.1:52277883-52277902	None:intergenic	35.0%
!	CAAGTGTTTTGTGTCTCTAT+AGG	-	chr5.1:52278527-52278546	None:intergenic	35.0%
!	CTATCTAAGATTCGTTGTCA+CGG	-	chr5.1:52278201-52278220	None:intergenic	35.0%
!	TATCTAAGATTCGTTGTCAC+GGG	-	chr5.1:52278200-52278219	None:intergenic	35.0%
!	TTGCAACCATGTTTTGCATT+TGG	-	chr5.1:52279050-52279069	None:intergenic	35.0%
!	TTTTGTGAAGAACATCCAAC+AGG	+	chr5.1:52279439-52279458	MS.gene21254:CDS	35.0%
!!!	ATGTTTTTGGCTGAAATGGT+TGG	-	chr5.1:52279183-52279202	None:intergenic	35.0%
	ACAAAGCTGAGCATAAGATG+AGG	-	chr5.1:52278471-52278490	None:intergenic	40.0%
	AGAGGTTCAGAAGAACCAAA+TGG	-	chr5.1:52279503-52279522	None:intergenic	40.0%
	AGATACTTGCATAACTCCCA+TGG	+	chr5.1:52279529-52279548	MS.gene21254:CDS	40.0%
	ATACAGAGCTTGAAACGCAT+TGG	-	chr5.1:52277994-52278013	None:intergenic	40.0%
	CAAAGTCACAACCAGAAAGA+GGG	-	chr5.1:52279139-52279158	None:intergenic	40.0%
	CCATTTCAGCCAAAAACATG+GGG	+	chr5.1:52279184-52279203	MS.gene21254:CDS	40.0%
	CTACCTGCTGTACTAAACTT+AGG	+	chr5.1:52278937-52278956	MS.gene21254:CDS	40.0%
	CTTCTCTTGGATGTTGTAAC+TGG	-	chr5.1:52279952-52279971	None:intergenic	40.0%
	GAGTTGCTAAAGTAACCTGT+TGG	-	chr5.1:52279457-52279476	None:intergenic	40.0%
	GATAGTAATGCCGTCTTTAG+AGG	-	chr5.1:52278445-52278464	None:intergenic	40.0%
	GCAATCAAGCAAATTAGGGT+TGG	-	chr5.1:52277878-52277897	None:intergenic	40.0%
	GGAGTCAATATATGCTGCAT+TGG	+	chr5.1:52279341-52279360	MS.gene21254:CDS	40.0%
	GTTCTTCAAGAGGAAACTGA+GGG	+	chr5.1:52279275-52279294	MS.gene21254:CDS	40.0%
	TATACTCCTCAGATTAGGTG+TGG	-	chr5.1:52278139-52278158	None:intergenic	40.0%
	TGAAAGACGGGAATAGTCAA+GGG	-	chr5.1:52277916-52277935	None:intergenic	40.0%
	TGTGGTATACTCCTCAGATT+AGG	-	chr5.1:52278144-52278163	None:intergenic	40.0%
	TGTTCTTCAAGAGGAAACTG+AGG	+	chr5.1:52279274-52279293	MS.gene21254:CDS	40.0%
	TTGGATGTTGTAACTGGCAA+GGG	-	chr5.1:52279946-52279965	None:intergenic	40.0%
	TTGTAGGATCCAGGAAAGAA+TGG	+	chr5.1:52278487-52278506	MS.gene21254:intron	40.0%
!	ATGCAAGTATCTAGCTTGAG+AGG	-	chr5.1:52279521-52279540	None:intergenic	40.0%
!	ATGCCGTCTTTAGAGGAATT+TGG	-	chr5.1:52278438-52278457	None:intergenic	40.0%
!	ATGTCTAATCTGGAGCATGA+GGG	-	chr5.1:52278169-52278188	None:intergenic	40.0%
!	CATCTTATGCTCAGCTTTGT+AGG	+	chr5.1:52278471-52278490	MS.gene21254:intron	40.0%
!	CCTTGATTTTCTCGCTTTAG+AGG	+	chr5.1:52278410-52278429	MS.gene21254:intron	40.0%
!	GAGCCAAATTCCTCTAAAGA+CGG	+	chr5.1:52278432-52278451	MS.gene21254:intron	40.0%
!!	AGAACCACACTTTTGGGAAA+TGG	+	chr5.1:52279320-52279339	MS.gene21254:CDS	40.0%
!!	CCTCTAAAGCGAGAAAATCA+AGG	-	chr5.1:52278413-52278432	None:intergenic	40.0%
!!	CTTGGTTTTCCATTCTTTCC+TGG	-	chr5.1:52278499-52278518	None:intergenic	40.0%
!!	TGTCGGTGTTGTGTAACATT+GGG	+	chr5.1:52278108-52278127	MS.gene21254:intron	40.0%
	AAAGAGGGCAGTAACATGGT+AGG	-	chr5.1:52279124-52279143	None:intergenic	45.0%
	ATACTCGGACTCAGAAGAGT+TGG	-	chr5.1:52279369-52279388	None:intergenic	45.0%
	ATCTACGTAGAAGACCTGAC+TGG	+	chr5.1:52279786-52279805	MS.gene21254:CDS	45.0%
	ATTAGACGTTGCTCGTGCAT+TGG	-	chr5.1:52279891-52279910	None:intergenic	45.0%
	CACGGACACAAAACACAACA+TGG	+	chr5.1:52278024-52278043	MS.gene21254:intron	45.0%
	CTGAAAGACGGGAATAGTCA+AGG	-	chr5.1:52277917-52277936	None:intergenic	45.0%
	CTTCTCAAAACGCTACAGCA+TGG	-	chr5.1:52278744-52278763	None:intergenic	45.0%
	CTTGACTATTCCCGTCTTTC+AGG	+	chr5.1:52277915-52277934	MS.gene21254:CDS	45.0%
	CTTGGATGTTGTAACTGGCA+AGG	-	chr5.1:52279947-52279966	None:intergenic	45.0%
	GACTCCATTTCCCAAAAGTG+TGG	-	chr5.1:52279327-52279346	None:intergenic	45.0%
	GAGCAACGTCTAATCAACGA+CGG	+	chr5.1:52279897-52279916	MS.gene21254:CDS	45.0%
	GAGCTGCTTGTGATTCCATT+TGG	+	chr5.1:52279485-52279504	MS.gene21254:CDS	45.0%
	GCAAAGTCACAACCAGAAAG+AGG	-	chr5.1:52279140-52279159	None:intergenic	45.0%
	GCCAAAAACATGGGGATTCT+CGG	+	chr5.1:52279192-52279211	MS.gene21254:CDS	45.0%
	GCTCCTAAGTTTAGTACAGC+AGG	-	chr5.1:52278943-52278962	None:intergenic	45.0%
	GGTCATGCTCATGTCTAATC+TGG	-	chr5.1:52278179-52278198	None:intergenic	45.0%
	GTGTCTCTATAGGGACAACT+TGG	-	chr5.1:52278517-52278536	None:intergenic	45.0%
	TACTCGGACTCAGAAGAGTT+GGG	-	chr5.1:52279368-52279387	None:intergenic	45.0%
	TGTTGTAACTGGCAAGGGTA+CGG	-	chr5.1:52279941-52279960	None:intergenic	45.0%
	TTAGACGTTGCTCGTGCATT+GGG	-	chr5.1:52279890-52279909	None:intergenic	45.0%
!	ATCACAAGCAGCTCTGATGA+AGG	-	chr5.1:52279479-52279498	None:intergenic	45.0%
!	CATGTCTAATCTGGAGCATG+AGG	-	chr5.1:52278170-52278189	None:intergenic	45.0%
!	TCCGAGAATCCCCATGTTTT+TGG	-	chr5.1:52279196-52279215	None:intergenic	45.0%
!	TGTCTAATCTGGAGCATGAG+GGG	-	chr5.1:52278168-52278187	None:intergenic	45.0%
!!	AAAGGAGATAGGAGGTACCA+TGG	-	chr5.1:52279549-52279568	None:intergenic	45.0%
!!	AAGGAGATAGGAGGTACCAT+GGG	-	chr5.1:52279548-52279567	None:intergenic	45.0%
!!	GTGTCGGTGTTGTGTAACAT+TGG	+	chr5.1:52278107-52278126	MS.gene21254:intron	45.0%
!!!	CCCCATGTTTTTGGCTGAAA+TGG	-	chr5.1:52279187-52279206	None:intergenic	45.0%
	ACAACATGGACACCGTACGA+AGG	+	chr5.1:52278038-52278057	MS.gene21254:intron	50.0%
	CAACGACGGTAAGCAACTAG+AGG	+	chr5.1:52279911-52279930	MS.gene21254:CDS	50.0%
	CCAGAAAGAGGGCAGTAACA+TGG	-	chr5.1:52279128-52279147	None:intergenic	50.0%
	CCATGTTACTGCCCTCTTTC+TGG	+	chr5.1:52279125-52279144	MS.gene21254:CDS	50.0%
	GTCTGAACTCTCAACCCTCA+GGG	-	chr5.1:52279823-52279842	None:intergenic	50.0%
	TCTGAACTCTCAACCCTCAG+GGG	-	chr5.1:52279822-52279841	None:intergenic	50.0%
	TGGAAAGACGATTCCCCTGA+GGG	+	chr5.1:52279806-52279825	MS.gene21254:CDS	50.0%
	TGTCTGAACTCTCAACCCTC+AGG	-	chr5.1:52279824-52279843	None:intergenic	50.0%
!	GTCTAATCTGGAGCATGAGG+GGG	-	chr5.1:52278167-52278186	None:intergenic	50.0%
!	TGCTCAGCTTTGTAGGATCC+AGG	+	chr5.1:52278478-52278497	MS.gene21254:intron	50.0%
	CTGGAAAGACGATTCCCCTG+AGG	+	chr5.1:52279805-52279824	MS.gene21254:CDS	55.0%
	GACACGCCACACCTAATCTG+AGG	+	chr5.1:52278130-52278149	MS.gene21254:intron	55.0%
	GGGGAATCGTCTTTCCAGTC+AGG	-	chr5.1:52279803-52279822	None:intergenic	55.0%
!	GGTGGATGGCTGACTTCTCT+TGG	-	chr5.1:52279965-52279984	None:intergenic	55.0%
	ACCTCATCCTCCGCCTCCAT+GGG	+	chr5.1:52279982-52280001	MS.gene21254:CDS	60.0%
!	ATCTGGAGCATGAGGGGGTG+TGG	-	chr5.1:52278162-52278181	None:intergenic	60.0%
	CACCTCATCCTCCGCCTCCA+TGG	+	chr5.1:52279981-52280000	MS.gene21254:CDS	65.0%
	CATGGAGGCGGAGGATGAGG+TGG	-	chr5.1:52279983-52280002	None:intergenic	65.0%
	GAGGCGGAGGATGAGGTGGA+TGG	-	chr5.1:52279979-52279998	None:intergenic	65.0%
	TCCCATGGAGGCGGAGGATG+AGG	-	chr5.1:52279986-52280005	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	52277856	52280010	52277856	ID=MS.gene21254
chr5.1	mRNA	52277856	52280010	52277856	ID=MS.gene21254.t1;Parent=MS.gene21254
chr5.1	exon	52277856	52277936	52277856	ID=MS.gene21254.t1.exon1;Parent=MS.gene21254.t1
chr5.1	CDS	52277856	52277936	52277856	ID=cds.MS.gene21254.t1;Parent=MS.gene21254.t1
chr5.1	exon	52278912	52279550	52278912	ID=MS.gene21254.t1.exon2;Parent=MS.gene21254.t1
chr5.1	CDS	52278912	52279550	52278912	ID=cds.MS.gene21254.t1;Parent=MS.gene21254.t1
chr5.1	exon	52279780	52280010	52279780	ID=MS.gene21254.t1.exon3;Parent=MS.gene21254.t1
chr5.1	CDS	52279780	52280010	52279780	ID=cds.MS.gene21254.t1;Parent=MS.gene21254.t1

Gene Sequence

>MS.gene21254

ATGGAGCCTTTGATGATTTCCAACCCTAATTTGCTTGATTGCTGCAAATGTTTTCAACCCTTGACTATTCCCGTCTTTCAGGTATGCATTTTCTTTTCATTTTTTCTTTCATAAATTATTTTCATATGAGAAGAGCCAATGCGTTTCAAGCTCTGTATTCAATAGTGTCACGGACACAAAACACAACATGGACACCGTACGAAGGTACTGTTGATAATTTGAAAAAATCACATAATTTAATGTAATTATATGTGTCGGTGTTGTGTAACATTGGGACACGCCACACCTAATCTGAGGAGTATACCACACCCCCTCATGCTCCAGATTAGACATGAGCATGACCCGTGACAACGAATCTTAGATAGTATTTGATATTTTCTTAGAATTTGTGTTGGGCATAAGGTGAAAATTACCCCCACTTATTTACTCATATCTAGGTCTTAACAAGTAATTCACTTTACAAGATAAATAAAGTATTATCAACCTAATAATTAGAAAATTAAAGATAAATATTAGAGGTACATCATAACAATCACGAATTTTTAAGTTAACGACCTTGATTTTCTCGCTTTAGAGGAGCCAAATTCCTCTAAAGACGGCATTACTATCACTCCTCATCTTATGCTCAGCTTTGTAGGATCCAGGAAAGAATGGAAAACCAAGTTGTCCCTATAGAGACACAAAACACTTGAGGCGAAACAGAGATAGATGCATAACGGTCTAGTAGTGAAGAGAGTGAGCATGACCACGATGAATAAGTTGTTAGAGATAGTGATTCTATTTAAGTGTGAATGTCTTTAATTTTGTATACCCTTCTACTTTTGAGTTTTTACATGTGTATGGTATGAACTTCTCTTATTGTTTCCCTAAACTTTGATATAGCAACCATGCTGTAGCGTTTTGAGAAGAATATATTAAGAATGATTAGCTTTATATTGGTTATACTTTTGATTACAAAACTTGCTAACAAGCCTTGCAATGAATCTCTTATTTTATTTTAACAAATGGTTCAAAGTATAATTTGATGATTTTCTTTTATGTTGCAATACCTTTCAGTGTGATAATGGTCATATTGTTTGCTCTACCTGCTGTACTAAACTTAGGAGCAAGTGTCACGAGTGCTCGTTGCGCATTAGCTCAAAACGTTGTAAAGCCATTGAGAATCTATTGCTATCTATCGAACTGTCATGTCCAAATGCAAAACATGGTTGCAAGGAGAAAATAAGTTACACTGGAAATAGAAAGCATGAAGACGAATGCATCTACCTACCATGTTACTGCCCTCTTTCTGGTTGTGACTTTGCTGCATCATCAAAAGTGTTGTCCAACCATTTCAGCCAAAAACATGGGGATTCTCGGATCAAATTTTCTTATGGTCACTCCTTCATTGTCTCTTTGAAGTCTAATGATGAAACCATTGTTCTTCAAGAGGAAACTGAGGGAAAACTATTTATCCTCAATAATAGAACCACACTTTTGGGAAATGGAGTCAATATATGCTGCATTGGTCCCAACTCTTCTGAGTCCGAGTATAGTTACGAAATATTGGCTAGGTCTCAGATATGCAAACTAACATTACAGTCTTTTGTGAAGAACATCCAACAGGTTACTTTAGCAACTCCTTCATCAGAGCTGCTTGTGATTCCATTTGGTTCTTCTGAACCTCTCAAGCTAGATACTTGCATAACTCCCATGGTACCTCCTATCTCCTTTTCTTTGTTTGTTTGTTTTTTTTTTTTTTTTTCCAATTACATTTTTGTTATTTTCTTTTATGTTTTGAATTTATACTCTAGCATTTTATCTCAAATTCATCAGTTTTTGAAATGCCAAAACTAAGGTTGTTAGTGTTTTCTATTTTTGGATTAGTTCTTGAAATGTCAGTCTCAAATTTTCTTTTACTGATTTAATGGTATTTGTGGTGCAGATGCAAATCTACGTAGAAGACCTGACTGGAAAGACGATTCCCCTGAGGGTTGAGAGTTCAGACACGATAGTCGATGTGAAGAAGAAGATTCTTGACATGGAAGGGATCCCAATGCACGAGCAACGTCTAATCAACGACGGTAAGCAACTAGAGGACAACCGTACCCTTGCCAGTTACAACATCCAAGAGAAGTCAGCCATCCACCTCATCCTCCGCCTCCATGGGAGCTAG

Protein sequence

>MS.gene21254.t1

MEPLMISNPNLLDCCKCFQPLTIPVFQCDNGHIVCSTCCTKLRSKCHECSLRISSKRCKAIENLLLSIELSCPNAKHGCKEKISYTGNRKHEDECIYLPCYCPLSGCDFAASSKVLSNHFSQKHGDSRIKFSYGHSFIVSLKSNDETIVLQEETEGKLFILNNRTTLLGNGVNICCIGPNSSESEYSYEILARSQICKLTLQSFVKNIQQVTLATPSSELLVIPFGSSEPLKLDTCITPMMQIYVEDLTGKTIPLRVESSDTIVDVKKKILDMEGIPMHEQRLINDGKQLEDNRTLASYNIQEKSAIHLILRLHGS