AlfalfaGEDB | MS.gene61945

M. sativa cultivar XinJiangDaYe / MS.gene61945

KEGG: K04506
GO: GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0019538 GO:0019941 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0046872 GO:0046914 GO:0048856 GO:0051603 GO:0071704 GO:0110165 GO:1901564 GO:1901575
PFAM: PF00240.26 PF03145.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61945.t1	XP_003615393.1	93	316	22	0	1	316	1	316	3.10E-169	604.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61945.t1	Q84K34	36.5	241	147	3	3	237	100	340	1.2e-41	171.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61945.t1	G7K621	93.0	316	22	0	1	316	1	316	2.2e-169	604.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene61945	MS.gene52735	PPI
MS.gene61945	MS.gene063576	PPI
MS.gene61945	MS.gene016802	PPI
MS.gene61945	MS.gene063596	PPI
MS.gene61945	MS.gene26202	PPI
MS.gene61945	MS.gene032536	PPI
MS.gene61945	MS.gene025074	PPI
MS.gene81807	MS.gene61945	PPI
MS.gene61945	MS.gene53618	PPI
MS.gene61945	MS.gene063598	PPI
MS.gene61945	MS.gene063586	PPI
MS.gene61945	MS.gene25827	PPI
MS.gene61945	MS.gene017321	PPI
MS.gene61945	MS.gene064974	PPI
MS.gene61945	MS.gene017315	PPI
MS.gene064975	MS.gene61945	PPI
MS.gene61945	MS.gene009570	PPI
MS.gene73973	MS.gene61945	PPI
MS.gene012651	MS.gene61945	PPI
MS.gene61945	MS.gene009573	PPI
MS.gene61945	MS.gene64288	PPI
MS.gene61945	MS.gene73975	PPI
MS.gene61945	MS.gene94984	PPI
MS.gene61945	MS.gene063584	PPI
MS.gene26198	MS.gene61945	PPI
MS.gene61945	MS.gene26189	PPI
MS.gene61945	MS.gene92427	PPI
MS.gene017309	MS.gene61945	PPI
MS.gene61945	MS.gene009543	PPI
MS.gene61945	MS.gene92432	PPI
MS.gene61945	MS.gene009566	PPI
MS.gene61945	MS.gene81557	PPI
MS.gene61945	MS.gene044969	PPI
MS.gene61945	MS.gene032535	PPI
MS.gene61945	MS.gene062461	PPI
MS.gene61945	MS.gene39862	PPI
MS.gene37878	MS.gene61945	PPI
MS.gene017314	MS.gene61945	PPI
MS.gene61945	MS.gene063587	PPI
MS.gene61945	MS.gene063610	PPI
MS.gene61945	MS.gene53616	PPI
MS.gene61945	MS.gene94985	PPI
MS.gene61945	MS.gene009560	PPI
MS.gene61945	MS.gene009591	PPI
MS.gene61945	MS.gene062462	PPI
MS.gene61945	MS.gene92433	PPI
MS.gene063581	MS.gene61945	PPI
MS.gene61945	MS.gene21254	PPI
MS.gene61945	MS.gene053691	PPI
MS.gene72920	MS.gene61945	PPI
MS.gene61945	MS.gene053692	PPI
MS.gene61945	MS.gene74055	PPI
MS.gene61945	MS.gene009564	PPI
MS.gene61945	MS.gene73977	PPI
MS.gene009577	MS.gene61945	PPI
MS.gene61945	MS.gene010031	PPI
MS.gene61945	MS.gene04692	PPI
MS.gene61945	MS.gene64287	PPI
MS.gene61945	MS.gene53619	PPI
MS.gene017324	MS.gene61945	PPI
MS.gene61945	MS.gene017300	PPI
MS.gene26190	MS.gene61945	PPI
MS.gene61945	MS.gene74054	PPI
MS.gene61945	MS.gene26190	PPI
MS.gene61945	MS.gene023735	PPI
MS.gene009562	MS.gene61945	PPI
MS.gene61945	MS.gene044971	PPI
MS.gene61945	MS.gene044173	PPI
MS.gene61945	MS.gene26186	PPI
MS.gene61945	MS.gene009559	PPI
MS.gene26191	MS.gene61945	PPI
MS.gene61945	MS.gene017337	PPI
MS.gene61945	MS.gene017318	PPI
MS.gene063603	MS.gene61945	PPI
MS.gene042174	MS.gene61945	PPI
MS.gene61945	MS.gene41691	PPI
MS.gene92435	MS.gene61945	PPI
MS.gene61945	MS.gene062459	PPI
MS.gene61945	MS.gene009576	PPI
MS.gene61945	MS.gene53617	PPI
MS.gene61945	MS.gene017316	PPI
MS.gene009543	MS.gene61945	PPI
MS.gene61945	MS.gene025072	PPI
MS.gene61945	MS.gene063581	PPI
MS.gene61945	MS.gene70750	PPI
MS.gene61945	MS.gene68940	PPI
MS.gene61945	MS.gene92429	PPI
MS.gene73975	MS.gene61945	PPI
MS.gene61945	MS.gene009547	PPI
MS.gene61945	MS.gene063599	PPI
MS.gene61945	MS.gene017308	PPI
MS.gene61945	MS.gene92430	PPI
MS.gene61945	MS.gene063589	PPI
MS.gene61945	MS.gene26197	PPI
MS.gene61945	MS.gene037087	PPI
MS.gene61945	MS.gene063583	PPI
MS.gene61945	MS.gene72920	PPI
MS.gene61945	MS.gene81818	PPI
MS.gene009561	MS.gene61945	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61945.t1	MTR_5g067400	93.038	316	22	0	1	316	1	316	0.0	603
MS.gene61945.t1	MTR_1g046640	82.278	316	55	1	1	316	1	315	0.0	529
MS.gene61945.t1	MTR_1g046650	78.797	316	66	1	1	316	32	346	0.0	510
MS.gene61945.t1	MTR_1g046650	78.797	316	66	1	1	316	1	315	0.0	509
MS.gene61945.t1	MTR_7g024290	76.266	316	74	1	1	315	1	316	4.37e-173	482
MS.gene61945.t1	MTR_1g046650	78.007	291	63	1	26	316	26	315	4.12e-165	462
MS.gene61945.t1	MTR_5g076810	84.015	269	42	1	49	316	2	270	1.14e-161	451
MS.gene61945.t1	MTR_7g094390	70.927	313	91	0	3	315	164	476	1.80e-159	454
MS.gene61945.t1	MTR_5g076520	70.253	316	90	2	1	312	1	316	1.74e-157	443
MS.gene61945.t1	MTR_5g076720	68.354	316	97	1	3	315	74	389	2.65e-155	440
MS.gene61945.t1	MTR_5g076660	68.371	313	96	1	4	313	26	338	2.80e-151	428
MS.gene61945.t1	MTR_5g061290	63.522	318	108	3	4	315	11	326	5.63e-144	409
MS.gene61945.t1	MTR_2g038430	63.077	325	107	2	4	315	18	342	3.51e-142	405
MS.gene61945.t1	MTR_5g076370	63.057	314	112	2	4	313	26	339	2.27e-140	400
MS.gene61945.t1	MTR_2g038420	63.091	317	112	2	4	315	18	334	2.01e-139	397
MS.gene61945.t1	MTR_5g076505	67.466	292	92	1	27	315	23	314	2.50e-139	397
MS.gene61945.t1	MTR_5g076820	72.500	280	69	5	1	275	10	286	1.16e-138	394
MS.gene61945.t1	MTR_1g046650	76.113	247	58	1	70	316	1	246	5.68e-135	383
MS.gene61945.t1	MTR_5g076540	77.632	228	51	0	1	228	1	228	1.35e-126	362
MS.gene61945.t1	MTR_5g077020	65.152	198	56	4	53	241	17	210	6.01e-80	242
MS.gene61945.t1	MTR_4g094468	46.610	236	121	3	5	237	91	324	1.20e-67	214
MS.gene61945.t1	MTR_4g058025	73.810	126	32	1	68	192	1	126	2.19e-57	183
MS.gene61945.t1	MTR_7g105080	69.737	76	23	0	241	316	1	76	5.47e-27	103
MS.gene61945.t1	MTR_3g092130	69.737	76	23	0	241	316	1	76	5.47e-27	103
MS.gene61945.t1	MTR_1g059690	69.737	76	23	0	241	316	1	76	5.47e-27	103
MS.gene61945.t1	MTR_8g088060	69.737	76	23	0	241	316	1	76	5.84e-27	103
MS.gene61945.t1	MTR_5g033960	69.737	76	23	0	241	316	1	76	6.15e-27	103
MS.gene61945.t1	MTR_3g092130	69.737	76	23	0	241	316	1	76	7.49e-27	103
MS.gene61945.t1	MTR_5g092700	69.737	76	23	0	241	316	1	76	8.77e-27	103
MS.gene61945.t1	MTR_5g092700	47.297	74	39	0	243	316	79	152	2.63e-13	67.0
MS.gene61945.t1	MTR_4g073580	69.737	76	23	0	241	316	1	76	8.77e-27	103
MS.gene61945.t1	MTR_4g073580	47.297	74	39	0	243	316	79	152	2.63e-13	67.0
MS.gene61945.t1	MTR_7g085590	28.125	224	144	4	6	225	58	268	1.05e-26	106
MS.gene61945.t1	MTR_4g073580	69.737	76	23	0	241	316	1	76	2.27e-26	103
MS.gene61945.t1	MTR_4g088485	69.737	76	23	0	241	316	1	76	2.74e-26	103
MS.gene61945.t1	MTR_4g088485	69.737	76	23	0	241	316	138	213	2.74e-26	103
MS.gene61945.t1	MTR_4g088485	56.579	76	18	1	241	316	77	137	3.73e-17	79.0
MS.gene61945.t1	MTR_7g116360	69.737	76	23	0	241	316	1	76	4.12e-26	103
MS.gene61945.t1	MTR_7g116360	69.737	76	23	0	241	316	77	152	4.12e-26	103
MS.gene61945.t1	MTR_7g116360	69.737	76	23	0	241	316	153	228	4.12e-26	103
MS.gene61945.t1	MTR_1g066390	69.737	76	23	0	241	316	1	76	5.15e-26	103
MS.gene61945.t1	MTR_1g066390	69.737	76	23	0	241	316	77	152	5.15e-26	103
MS.gene61945.t1	MTR_1g066390	69.737	76	23	0	241	316	153	228	5.15e-26	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	1	76	8.67e-26	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	77	152	8.67e-26	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	153	228	8.67e-26	103
MS.gene61945.t1	MTR_7g116360	63.953	86	31	0	231	316	115	200	1.12e-25	103
MS.gene61945.t1	MTR_7g116360	63.953	86	31	0	231	316	191	276	1.12e-25	103
MS.gene61945.t1	MTR_7g116360	69.737	76	23	0	241	316	49	124	1.36e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	1	76	1.17e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	77	152	1.17e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	153	228	1.17e-25	103
MS.gene61945.t1	MTR_4g080920	68.421	76	24	0	241	316	77	152	1.30e-25	102
MS.gene61945.t1	MTR_4g080920	68.421	76	24	0	241	316	1	76	2.53e-25	101
MS.gene61945.t1	MTR_4g080920	56.579	76	33	0	241	316	153	228	2.28e-19	85.5
MS.gene61945.t1	MTR_6g061930	69.737	76	23	0	241	316	1	76	1.35e-25	103
MS.gene61945.t1	MTR_6g061930	69.737	76	23	0	241	316	77	152	1.35e-25	103
MS.gene61945.t1	MTR_6g061930	69.737	76	23	0	241	316	214	289	1.35e-25	103
MS.gene61945.t1	MTR_6g061930	53.947	76	20	1	241	316	153	213	6.04e-15	74.3
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	1	76	1.81e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	77	152	1.81e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	153	228	1.81e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	229	304	1.81e-25	103
MS.gene61945.t1	MTR_4g080797	69.737	76	23	0	241	316	1	76	5.19e-25	103
MS.gene61945.t1	MTR_4g080797	69.737	76	23	0	241	316	77	152	5.19e-25	103
MS.gene61945.t1	MTR_4g080797	69.737	76	23	0	241	316	153	228	5.19e-25	103
MS.gene61945.t1	MTR_4g080797	69.737	76	23	0	241	316	229	304	5.19e-25	103
MS.gene61945.t1	MTR_4g080797	69.737	76	23	0	241	316	305	380	5.19e-25	103
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	1	76	5.19e-25	103
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	77	152	5.19e-25	103
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	153	228	5.19e-25	103
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	305	380	5.19e-25	103
MS.gene61945.t1	MTR_4g091580	68.421	76	24	0	241	316	229	304	1.84e-24	102
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	1	76	5.19e-25	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	77	152	5.19e-25	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	153	228	5.19e-25	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	229	304	5.19e-25	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	305	380	5.19e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	1	76	5.51e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	77	152	5.51e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	153	228	5.51e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	229	304	5.51e-25	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	305	380	5.51e-25	103
MS.gene61945.t1	MTR_8g081020	69.737	76	23	0	241	316	1	76	5.57e-25	103
MS.gene61945.t1	MTR_8g081020	69.737	76	23	0	241	316	77	152	5.57e-25	103
MS.gene61945.t1	MTR_8g081020	69.737	76	23	0	241	316	153	228	5.57e-25	103
MS.gene61945.t1	MTR_8g081020	69.737	76	23	0	241	316	229	304	5.57e-25	103
MS.gene61945.t1	MTR_8g081020	69.737	76	23	0	241	316	305	380	5.57e-25	103
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	305	380	8.44e-25	104
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	1	76	1.92e-24	103
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	77	152	1.92e-24	103
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	153	228	1.92e-24	103
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	229	304	1.92e-24	103
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	381	456	1.92e-24	103
MS.gene61945.t1	MTR_4g091580	69.737	76	23	0	241	316	457	532	1.92e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	1	76	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	77	152	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	153	228	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	229	304	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	305	380	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	381	456	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	1	76	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	77	152	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	153	228	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	229	304	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	305	380	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	381	456	1.09e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	1	76	1.68e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	77	152	1.68e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	153	228	1.68e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	229	304	1.68e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	305	380	1.68e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	381	456	1.68e-24	103
MS.gene61945.t1	MTR_8g018230	69.737	76	23	0	241	316	457	532	1.68e-24	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	1	76	1.73e-24	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	77	152	1.73e-24	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	153	228	1.73e-24	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	229	304	1.73e-24	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	305	380	1.73e-24	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	381	456	1.73e-24	103
MS.gene61945.t1	MTR_4g081010	69.737	76	23	0	241	316	457	532	1.73e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	77	152	2.59e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	153	228	2.59e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	229	304	2.59e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	305	380	2.59e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	381	456	2.59e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	457	532	2.59e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	533	608	2.59e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	609	684	2.59e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	685	760	2.59e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	761	836	2.59e-24	103
MS.gene61945.t1	MTR_4g088495	69.737	76	23	0	241	316	1	76	2.85e-24	103
MS.gene61945.t1	MTR_5g061310	57.895	76	32	0	240	315	1	76	9.27e-22	87.8
MS.gene61945.t1	MTR_8g479250	63.953	86	31	0	231	316	131	216	1.39e-21	93.2
MS.gene61945.t1	MTR_8g479250	52.439	82	28	1	231	312	207	277	5.83e-16	77.4
MS.gene61945.t1	MTR_5g076740	60.000	75	27	2	241	312	86	160	1.04e-20	87.4
MS.gene61945.t1	MTR_5g076760	66.667	57	19	0	251	307	5	61	1.70e-19	81.6
MS.gene61945.t1	MTR_3g017590	25.238	210	147	4	11	210	53	262	2.32e-18	84.3
MS.gene61945.t1	MTR_1g054335	27.419	248	159	7	10	238	57	302	2.80e-18	84.0
MS.gene61945.t1	MTR_5g076340	56.000	75	31	2	241	313	9	83	9.17e-18	77.0
MS.gene61945.t1	MTR_3g091510	27.751	209	141	4	11	209	60	268	1.45e-17	82.0
MS.gene61945.t1	MTR_8g038370	25.714	210	146	4	11	210	112	321	1.88e-17	82.4
MS.gene61945.t1	MTR_7g093600	24.514	257	171	6	10	247	58	310	3.43e-17	80.9
MS.gene61945.t1	MTR_5g076780	58.333	60	25	0	254	313	3	62	4.34e-17	74.7
MS.gene61945.t1	MTR_5g076350	52.703	74	34	1	241	313	8	81	5.47e-17	75.1
MS.gene61945.t1	MTR_7g117415	26.267	217	150	4	3	209	53	269	5.91e-17	80.5
MS.gene61945.t1	MTR_8g027520	30.636	173	114	4	3	169	36	208	8.97e-17	79.7
MS.gene61945.t1	MTR_8g027520	30.636	173	114	4	3	169	45	217	9.57e-17	79.7
MS.gene61945.t1	MTR_1g008120	33.083	133	86	2	11	140	68	200	1.87e-16	79.0
MS.gene61945.t1	MTR_4g009980	46.970	66	35	0	250	315	5	70	6.20e-15	68.9
MS.gene61945.t1	MTR_5g076750	56.250	48	21	0	265	312	17	64	2.58e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61945.t1	AT5G37930	36.752	234	144	2	8	237	107	340	4.87e-49	167
MS.gene61945.t1	AT1G66620	33.475	236	148	4	10	237	40	274	4.98e-41	145
MS.gene61945.t1	AT5G37870	33.740	246	156	6	5	243	36	281	4.35e-40	142
MS.gene61945.t1	AT5G37890	33.772	228	139	4	5	224	42	265	2.85e-38	137
MS.gene61945.t1	AT1G66650	34.199	231	141	6	4	224	76	305	4.27e-36	132
MS.gene61945.t1	AT1G66630	33.184	223	142	4	10	225	45	267	1.19e-33	125
MS.gene61945.t1	AT5G37910	31.278	227	150	3	4	224	28	254	1.61e-33	124
MS.gene61945.t1	AT1G66660	36.667	180	106	4	2	174	94	272	6.24e-32	122
MS.gene61945.t1	AT5G62800	32.271	251	160	7	10	250	39	289	2.22e-31	120
MS.gene61945.t1	AT5G62800	30.798	263	166	6	10	256	39	301	3.30e-31	119
MS.gene61945.t1	AT3G62250	69.737	76	23	0	241	316	1	76	4.76e-27	104
MS.gene61945.t1	AT2G47110	69.737	76	23	0	241	316	1	76	4.81e-27	104
MS.gene61945.t1	AT2G47110	69.737	76	23	0	241	316	1	76	4.81e-27	104
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	1	76	6.43e-27	103
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	77	152	6.43e-27	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	1	76	6.43e-27	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	77	152	6.43e-27	103
MS.gene61945.t1	AT3G52590	69.737	76	23	0	241	316	1	76	6.84e-27	102
MS.gene61945.t1	AT2G36170	69.737	76	23	0	241	316	1	76	6.84e-27	102
MS.gene61945.t1	AT1G23410	69.737	76	23	0	241	316	1	76	7.13e-27	103
MS.gene61945.t1	AT2G35635	69.737	76	23	0	241	316	1	76	1.04e-26	103
MS.gene61945.t1	AT2G35635	45.946	74	40	0	243	316	79	152	3.51e-12	63.9
MS.gene61945.t1	AT1G31340	69.737	76	23	0	241	316	1	76	1.06e-26	103
MS.gene61945.t1	AT1G31340	47.297	74	39	0	243	316	79	152	2.99e-13	67.0
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	1	76	4.31e-26	103
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	77	152	4.31e-26	103
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	153	228	4.31e-26	103
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	1	76	4.31e-26	103
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	77	152	4.31e-26	103
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	153	228	4.31e-26	103
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	1	76	4.31e-26	103
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	77	152	4.31e-26	103
MS.gene61945.t1	AT4G05050	69.737	76	23	0	241	316	153	228	4.31e-26	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	1	76	4.31e-26	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	77	152	4.31e-26	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	153	228	4.31e-26	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	1	76	4.31e-26	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	77	152	4.31e-26	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	153	228	4.31e-26	103
MS.gene61945.t1	AT1G55060	68.421	76	24	0	241	316	77	152	1.34e-25	102
MS.gene61945.t1	AT1G55060	61.628	86	33	0	231	316	143	228	9.55e-24	97.4
MS.gene61945.t1	AT1G55060	61.842	76	29	0	241	316	1	76	1.40e-21	91.7
MS.gene61945.t1	AT1G65350	69.737	76	23	0	241	316	1	76	1.68e-25	104
MS.gene61945.t1	AT1G65350	68.421	76	24	0	241	316	152	227	2.18e-24	101
MS.gene61945.t1	AT1G65350	68.421	76	23	1	241	316	77	151	1.21e-22	96.3
MS.gene61945.t1	AT1G65350	54.444	90	27	1	241	316	228	317	6.93e-18	83.2
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	1	76	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	77	152	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	153	228	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	229	304	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	1	76	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	77	152	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	153	228	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	229	304	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	1	76	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	77	152	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	153	228	1.80e-25	103
MS.gene61945.t1	AT5G03240	69.737	76	23	0	241	316	229	304	1.80e-25	103
MS.gene61945.t1	AT5G20620	69.737	76	23	0	241	316	1	76	1.80e-25	103
MS.gene61945.t1	AT5G20620	69.737	76	23	0	241	316	77	152	1.80e-25	103
MS.gene61945.t1	AT5G20620	69.737	76	23	0	241	316	153	228	1.80e-25	103
MS.gene61945.t1	AT5G20620	69.737	76	23	0	241	316	229	304	1.80e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	1	76	1.92e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	77	152	1.92e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	153	228	1.92e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	229	304	1.92e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	1	76	1.92e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	77	152	1.92e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	153	228	1.92e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	229	304	1.92e-25	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	1	76	1.92e-25	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	77	152	1.92e-25	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	153	228	1.92e-25	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	229	304	1.92e-25	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	1	76	1.92e-25	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	77	152	1.92e-25	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	153	228	1.92e-25	103
MS.gene61945.t1	AT4G02890	69.737	76	23	0	241	316	229	304	1.92e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	1	76	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	77	152	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	153	228	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	229	304	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	305	380	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	1	76	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	77	152	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	153	228	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	229	304	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	305	380	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	1	76	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	77	152	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	153	228	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	229	304	5.44e-25	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	305	380	5.44e-25	103
MS.gene61945.t1	AT5G20620	69.737	76	23	0	241	316	1	76	5.50e-25	103
MS.gene61945.t1	AT5G20620	69.737	76	23	0	241	316	77	152	5.50e-25	103
MS.gene61945.t1	AT5G20620	69.737	76	23	0	241	316	153	228	5.50e-25	103
MS.gene61945.t1	AT5G20620	69.737	76	23	0	241	316	229	304	5.50e-25	103
MS.gene61945.t1	AT5G20620	69.737	76	23	0	241	316	305	380	5.50e-25	103
MS.gene61945.t1	AT5G37640	61.628	86	33	0	231	316	69	154	7.82e-25	102
MS.gene61945.t1	AT5G37640	69.737	76	23	0	241	316	155	230	5.78e-24	100
MS.gene61945.t1	AT5G37640	63.636	77	27	1	241	316	231	307	2.86e-19	87.0
MS.gene61945.t1	AT5G37640	56.579	76	33	0	241	316	3	78	2.85e-17	81.3
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	1	76	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	77	152	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	153	228	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	229	304	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	305	380	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	381	456	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	1	76	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	77	152	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	153	228	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	229	304	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	305	380	1.14e-24	103
MS.gene61945.t1	AT4G05320	69.737	76	23	0	241	316	381	456	1.14e-24	103
MS.gene61945.t1	AT3G09790	61.628	86	33	0	231	316	69	154	6.77e-22	96.7
MS.gene61945.t1	AT3G09790	61.842	76	29	0	241	316	3	78	2.89e-20	91.7
MS.gene61945.t1	AT3G09790	59.459	74	30	0	241	314	552	625	4.65e-17	82.0
MS.gene61945.t1	AT3G09790	52.439	82	32	2	241	315	155	236	9.91e-15	75.1
MS.gene61945.t1	AT3G09790	53.165	79	32	1	241	314	238	316	1.75e-13	71.2
MS.gene61945.t1	AT3G09790	50.000	76	37	1	241	315	393	468	6.50e-12	66.6
MS.gene61945.t1	AT3G09790	52.632	76	34	1	241	314	319	394	1.77e-11	65.5
MS.gene61945.t1	AT3G09790	37.209	129	60	2	200	307	414	542	6.36e-11	63.5
MS.gene61945.t1	AT3G09790	61.628	86	33	0	231	316	69	154	6.77e-22	96.7
MS.gene61945.t1	AT3G09790	61.842	76	29	0	241	316	3	78	2.89e-20	91.7
MS.gene61945.t1	AT3G09790	59.459	74	30	0	241	314	552	625	4.65e-17	82.0
MS.gene61945.t1	AT3G09790	52.439	82	32	2	241	315	155	236	9.91e-15	75.1
MS.gene61945.t1	AT3G09790	53.165	79	32	1	241	314	238	316	1.75e-13	71.2
MS.gene61945.t1	AT3G09790	50.000	76	37	1	241	315	393	468	6.50e-12	66.6
MS.gene61945.t1	AT3G09790	52.632	76	34	1	241	314	319	394	1.77e-11	65.5
MS.gene61945.t1	AT3G09790	37.209	129	60	2	200	307	414	542	6.36e-11	63.5
MS.gene61945.t1	AT1G53930	54.054	74	34	0	240	313	85	158	1.35e-17	79.0
MS.gene61945.t1	AT4G27880	27.273	209	142	4	11	209	61	269	4.77e-17	80.9
MS.gene61945.t1	AT3G61790	31.206	141	94	2	3	140	52	192	2.41e-16	79.0
MS.gene61945.t1	AT3G58040	24.180	244	166	5	11	235	57	300	2.81e-16	78.2
MS.gene61945.t1	AT3G58040	24.180	244	166	5	11	235	57	300	2.81e-16	78.2
MS.gene61945.t1	AT1G66610	27.219	169	120	3	59	224	166	334	4.39e-16	78.6
MS.gene61945.t1	AT1G66610	48.438	64	33	0	10	73	52	115	4.86e-13	69.3
MS.gene61945.t1	AT2G41980	24.082	245	169	6	11	238	54	298	1.46e-15	76.3
MS.gene61945.t1	AT3G58040	30.075	133	90	2	11	140	57	189	1.55e-14	72.0
MS.gene61945.t1	AT1G66660	27.919	197	130	6	53	238	21	216	2.06e-14	71.6
MS.gene61945.t1	AT1G53950	39.773	88	49	1	228	311	52	139	5.60e-14	68.6
MS.gene61945.t1	AT5G37900	24.569	232	137	4	10	235	31	230	3.50e-13	68.6
MS.gene61945.t1	AT1G66610	45.833	72	39	0	6	77	153	224	4.47e-13	68.2
MS.gene61945.t1	AT1G66610	48.438	64	33	0	10	73	52	115	7.92e-13	67.4
MS.gene61945.t1	AT1G11980	44.000	75	42	0	241	315	1	75	8.13e-13	63.5

Find 71 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCATGTTACTGCCCTCTTTC+TGG	0.052861	5.2:+57365292	MS.gene61945:CDS
CTTGACTATTCCCGTCTTTC+AGG	0.122055	5.2:+57364070	MS.gene61945:CDS
TTGCAGCAATCAAGCAAATT+AGG	0.143035	5.2:-57364035	None:intergenic
CAATAATAGATCCACGCTTT+TGG	0.272282	5.2:+57365480	MS.gene61945:CDS
CTTCTCTTGGATATTGTAAC+TGG	0.305231	5.2:-57366105	None:intergenic
TGCAGCAATCAAGCAAATTA+GGG	0.339740	5.2:-57364034	None:intergenic
AGCCTGGTCCTCCGCCTCCA+TGG	0.343575	5.2:+57366137	MS.gene61945:CDS
AAATAAGTTACACTGGAAAT+AGG	0.344851	5.2:+57365242	MS.gene61945:CDS
ACTACCTTTCAGTGTGATAA+TGG	0.364522	5.2:+57365067	MS.gene61945:intron
CGAGTATAGTTATGATATAT+TGG	0.369818	5.2:+57365549	MS.gene61945:CDS
GGCTGATGGTTGACTTCTCT+TGG	0.383938	5.2:-57366118	None:intergenic
GAGTTGCTTGTGATTCCATT+TGG	0.402141	5.2:+57365652	MS.gene61945:CDS
GCCTGGTCCTCCGCCTCCAT+GGG	0.412140	5.2:+57366138	MS.gene61945:CDS
TCAGACGTTGCTCGTGCATT+GGG	0.422840	5.2:-57366043	None:intergenic
TCCCATGGAGGCGGAGGACC+AGG	0.427876	5.2:-57366139	None:intergenic
GCAAAGTCACAGCCAGAAAG+AGG	0.440435	5.2:-57365304	None:intergenic
ATCAGACGTTGCTCGTGCAT+TGG	0.455161	5.2:-57366044	None:intergenic
TGCTGGTCAGCTAGCTCCCA+TGG	0.467796	5.2:-57366154	None:intergenic
GGGGAATCGTCTTTCCAGTC+AGG	0.471810	5.2:-57365956	None:intergenic
TGTCTGAACTCTCAACCCTC+AGG	0.476732	5.2:-57365977	None:intergenic
GGAGTCAATATTTGCTGCGT+TGG	0.487821	5.2:+57365508	MS.gene61945:CDS
CAATATATCATAACTATACT+CGG	0.493864	5.2:-57365548	None:intergenic
GCTCCTAAGTTTAGTACAGC+AGG	0.503795	5.2:-57365107	None:intergenic
CTACCTGCTGTACTAAACTT+AGG	0.508269	5.2:+57365104	MS.gene61945:CDS
GCTAGCTCCCATGGAGGCGG+AGG	0.509550	5.2:-57366145	None:intergenic
ATGATATATTGGCTAGGTCT+CGG	0.512134	5.2:+57365560	MS.gene61945:CDS
AAGAAGATTCTTGACAAGGA+AGG	0.518341	5.2:+57366017	MS.gene61945:CDS
CTTGGATATTGTAACTGGCA+AGG	0.518400	5.2:-57366100	None:intergenic
TACTCGGACTCAGAAGAGTT+GGG	0.518669	5.2:-57365532	None:intergenic
TCAGCTAGCTCCCATGGAGG+CGG	0.520530	5.2:-57366148	None:intergenic
CCAGAAAGAGGGCAGTAACA+TGG	0.520870	5.2:-57365292	None:intergenic
AAAATGCATACCTGAAAGAC+GGG	0.531395	5.2:-57364080	None:intergenic
ATACTCGGACTCAGAAGAGT+TGG	0.531863	5.2:-57365533	None:intergenic
AGAAGATTCTTGACAAGGAA+GGG	0.537085	5.2:+57366018	MS.gene61945:CDS
GTCTGAACTCTCAACCCTCA+GGG	0.537701	5.2:-57365976	None:intergenic
TGAAACCATTGTTCTTCAAG+AGG	0.538905	5.2:+57365432	MS.gene61945:CDS
AGAGGTTCAGAAGAACCAAA+TGG	0.542803	5.2:-57365667	None:intergenic
TTGGATATTGTAACTGGCAA+GGG	0.543766	5.2:-57366099	None:intergenic
CAAAGTCACAGCCAGAAAGA+GGG	0.549581	5.2:-57365303	None:intergenic
GCAATCAAGCAAATTAGGGT+TGG	0.551048	5.2:-57364030	None:intergenic
ATCACAAGCAACTCTGATGA+AGG	0.553309	5.2:-57365643	None:intergenic
AGTTTCCTCTTGAAGAACAA+TGG	0.554557	5.2:-57365437	None:intergenic
GAGCAACGTCTGATCATTGA+CGG	0.559922	5.2:+57366053	MS.gene61945:CDS
GAGGCGGAGGACCAGGCTGA+TGG	0.560704	5.2:-57366132	None:intergenic
GAAAATGCATACCTGAAAGA+CGG	0.560897	5.2:-57364081	None:intergenic
TATTGTAACTGGCAAGGGTA+CGG	0.561508	5.2:-57366094	None:intergenic
GAGTTATGCAAATATCTAGC+TGG	0.565199	5.2:-57365690	None:intergenic
AGATAGCAATAGATTCTCAA+TGG	0.569736	5.2:-57365176	None:intergenic
CTGAAAGACGGGAATAGTCA+AGG	0.570795	5.2:-57364069	None:intergenic
GACTCCATTTCCCAAAAGCG+TGG	0.579995	5.2:-57365491	None:intergenic
AAATGCAAAACATGGTTGCA+AGG	0.587331	5.2:+57365216	MS.gene61945:CDS
AGAGAAGTCAACCATCAGCC+TGG	0.589888	5.2:+57366121	MS.gene61945:CDS
TGGAAAGACGATTCCCCTGA+GGG	0.592671	5.2:+57365962	MS.gene61945:CDS
ATAGTTATGATATATTGGCT+AGG	0.603327	5.2:+57365554	MS.gene61945:CDS
CGACTTCAAAGAGACAATGA+AGG	0.604294	5.2:-57365404	None:intergenic
GTTCTTCAAGAGGAAACTGA+GGG	0.606511	5.2:+57365442	MS.gene61945:CDS
TGAAAGACGGGAATAGTCAA+GGG	0.607822	5.2:-57364068	None:intergenic
AAGGAGAAAATAAGTTACAC+TGG	0.610981	5.2:+57365235	MS.gene61945:CDS
ATGCAAATATCTAGCTGGAG+AGG	0.617969	5.2:-57365685	None:intergenic
AAAGAGGGCAGTAACATGGA+AGG	0.618944	5.2:-57365288	None:intergenic
TTAGGGTTGGAAATCATCAA+AGG	0.620519	5.2:-57364017	None:intergenic
ATCTACGTAGAAGACCTGAC+TGG	0.622712	5.2:+57365942	MS.gene61945:CDS
AGATATTTGCATAACTCCCA+TGG	0.623725	5.2:+57365696	MS.gene61945:CDS
GAGTTGCTAAAGCAACCTGT+TGG	0.625946	5.2:-57365621	None:intergenic
TGTTCTTCAAGAGGAAACTG+AGG	0.641132	5.2:+57365441	MS.gene61945:CDS
GAAGAAGAAGATTCTTGACA+AGG	0.649256	5.2:+57366013	MS.gene61945:CDS
CTGGAAAGACGATTCCCCTG+AGG	0.658150	5.2:+57365961	MS.gene61945:CDS
TCTGAACTCTCAACCCTCAG+GGG	0.666137	5.2:-57365975	None:intergenic
CATTGACGGTAAGCAACTAG+AGG	0.674512	5.2:+57366067	MS.gene61945:CDS
TCATGTCCAAATGCAAAACA+TGG	0.717946	5.2:+57365208	MS.gene61945:CDS
TGGTCAGCTAGCTCCCATGG+AGG	0.724865	5.2:-57366151	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATTAGAGATAAATATTAG+AGG	+	chr5.2:57364517-57364536	MS.gene61945:intron	15.0%
!!	AAGAAAAAAAAACAAAGAAA+AGG	-	chr5.2:57365734-57365753	None:intergenic	15.0%
!!!	TCTCTAATTTTCTAATTATT+TGG	-	chr5.2:57364507-57364526	None:intergenic	15.0%
!!!	TCTTATTTTATTCTAACAAA+TGG	+	chr5.2:57365008-57365027	MS.gene61945:intron	15.0%
!!	CAATATATCATAACTATACT+CGG	-	chr5.2:57365551-57365570	None:intergenic	20.0%
!!!	AAGAATGATTAGCTTTATAT+TGG	+	chr5.2:57364939-57364958	MS.gene61945:intron	20.0%
!!!	ATTTTCTTTTACCGATTTAA+TGG	+	chr5.2:57365899-57365918	MS.gene61945:intron	20.0%
!!!	TTGTTAGTGTTTTCTATTTT+TGG	+	chr5.2:57365850-57365869	MS.gene61945:intron	20.0%
!!!	TTTTTAAAATGCGAAAACTA+AGG	+	chr5.2:57365827-57365846	MS.gene61945:intron	20.0%
!	AAAAACAAAGAAAAGGAGAT+AGG	-	chr5.2:57365727-57365746	None:intergenic	25.0%
!	AAAATAAGAGATTCATTGCA+AGG	-	chr5.2:57364997-57365016	None:intergenic	25.0%
!	AAATAAGTTACACTGGAAAT+AGG	+	chr5.2:57365242-57365261	MS.gene61945:CDS	25.0%
!	CGAGTATAGTTATGATATAT+TGG	+	chr5.2:57365549-57365568	MS.gene61945:CDS	25.0%
!	CTAGATATGAGTAAATAAGT+GGG	-	chr5.2:57364438-57364457	None:intergenic	25.0%
!	TAGATATGAGTAAATAAGTG+GGG	-	chr5.2:57364437-57364456	None:intergenic	25.0%
!	TTTAACGCAATTATTTGTGT+CGG	+	chr5.2:57364246-57364265	MS.gene61945:intron	25.0%
!!	ATAGTTATGATATATTGGCT+AGG	+	chr5.2:57365554-57365573	MS.gene61945:CDS	25.0%
!!!	TTTGAGTTTTTACATGTGTA+TGG	+	chr5.2:57364826-57364845	MS.gene61945:intron	25.0%
	AAACAGAGATAGATGCATAA+CGG	+	chr5.2:57364717-57364736	MS.gene61945:intron	30.0%
	AAATACTATCCAAGATTCGT+TGG	-	chr5.2:57364370-57364389	None:intergenic	30.0%
	AAGGAGAAAATAAGTTACAC+TGG	+	chr5.2:57365235-57365254	MS.gene61945:CDS	30.0%
	AATACTATCCAAGATTCGTT+GGG	-	chr5.2:57364369-57364388	None:intergenic	30.0%
	AGATAGCAATAGATTCTCAA+TGG	-	chr5.2:57365179-57365198	None:intergenic	30.0%
	AGATATGAGTAAATAAGTGG+GGG	-	chr5.2:57364436-57364455	None:intergenic	30.0%
	CACCACAAATACCATTAAAT+CGG	-	chr5.2:57365913-57365932	None:intergenic	30.0%
	CCACTTATTTACTCATATCT+AGG	+	chr5.2:57364436-57364455	MS.gene61945:intron	30.0%
	CCTAGATATGAGTAAATAAG+TGG	-	chr5.2:57364439-57364458	None:intergenic	30.0%
	TAGAATTTGTGTTGAGCATA+AGG	+	chr5.2:57364400-57364419	MS.gene61945:intron	30.0%
	TGTAAAAACTCAAAAGCAGA+AGG	-	chr5.2:57364820-57364839	None:intergenic	30.0%
	TTAACGCAATTATTTGTGTC+GGG	+	chr5.2:57364247-57364266	MS.gene61945:intron	30.0%
!	AAGTGTTTTGTGTCTCTATA+GGG	-	chr5.2:57364691-57364710	None:intergenic	30.0%
!	AATAATAGATCCACGCTTTT+GGG	+	chr5.2:57365481-57365500	MS.gene61945:CDS	30.0%
!	TCTCGGATCAAATTTTCTTA+TGG	+	chr5.2:57365376-57365395	MS.gene61945:CDS	30.0%
!!	TACCGATTTAATGGTATTTG+TGG	+	chr5.2:57365908-57365927	MS.gene61945:intron	30.0%
	AAAATGCATACCTGAAAGAC+GGG	-	chr5.2:57364083-57364102	None:intergenic	35.0%
	AAATGCAAAACATGGTTGCA+AGG	+	chr5.2:57365216-57365235	MS.gene61945:CDS	35.0%
	AACAAAGAAAAGGAGATAGG+AGG	-	chr5.2:57365724-57365743	None:intergenic	35.0%
	AACCATTTCAGCCAAAAACA+TGG	+	chr5.2:57365349-57365368	MS.gene61945:CDS	35.0%
	AAGAAGATTCTTGACAAGGA+AGG	+	chr5.2:57366017-57366036	MS.gene61945:CDS	35.0%
	ACCATTTCAGCCAAAAACAT+GGG	+	chr5.2:57365350-57365369	MS.gene61945:CDS	35.0%
	ACTACCTTTCAGTGTGATAA+TGG	+	chr5.2:57365067-57365086	MS.gene61945:intron	35.0%
	AGAAGATTCTTGACAAGGAA+GGG	+	chr5.2:57366018-57366037	MS.gene61945:CDS	35.0%
	AGATATTTGCATAACTCCCA+TGG	+	chr5.2:57365696-57365715	MS.gene61945:CDS	35.0%
	AGTTTCCTCTTGAAGAACAA+TGG	-	chr5.2:57365440-57365459	None:intergenic	35.0%
	ATAGAGACACAAAACACTTG+AGG	+	chr5.2:57364692-57364711	MS.gene61945:intron	35.0%
	ATGACCATTATCACACTGAA+AGG	-	chr5.2:57365074-57365093	None:intergenic	35.0%
	CTTCTCTTGGATATTGTAAC+TGG	-	chr5.2:57366108-57366127	None:intergenic	35.0%
	GAAAATGCATACCTGAAAGA+CGG	-	chr5.2:57364084-57364103	None:intergenic	35.0%
	GAAGAAGAAGATTCTTGACA+AGG	+	chr5.2:57366013-57366032	MS.gene61945:CDS	35.0%
	GAGTTATGCAAATATCTAGC+TGG	-	chr5.2:57365693-57365712	None:intergenic	35.0%
	GATATGAGTAAATAAGTGGG+GGG	-	chr5.2:57364435-57364454	None:intergenic	35.0%
	GGTTGCTGTATCAAAGTTTA+GGG	-	chr5.2:57364872-57364891	None:intergenic	35.0%
	TCATGTCCAAATGCAAAACA+TGG	+	chr5.2:57365208-57365227	MS.gene61945:CDS	35.0%
	TGAAACCATTGTTCTTCAAG+AGG	+	chr5.2:57365432-57365451	MS.gene61945:CDS	35.0%
	TGCAGCAATCAAGCAAATTA+GGG	-	chr5.2:57364037-57364056	None:intergenic	35.0%
	TGGTTGCTGTATCAAAGTTT+AGG	-	chr5.2:57364873-57364892	None:intergenic	35.0%
	TTAGGGTTGGAAATCATCAA+AGG	-	chr5.2:57364020-57364039	None:intergenic	35.0%
	TTGCAGCAATCAAGCAAATT+AGG	-	chr5.2:57364038-57364057	None:intergenic	35.0%
	TTGGATATTGTAACTGGCAA+GGG	-	chr5.2:57366102-57366121	None:intergenic	35.0%
!	ATGATATATTGGCTAGGTCT+CGG	+	chr5.2:57365560-57365579	MS.gene61945:CDS	35.0%
!	CAAGTGTTTTGTGTCTCTAT+AGG	-	chr5.2:57364692-57364711	None:intergenic	35.0%
!	CAATAATAGATCCACGCTTT+TGG	+	chr5.2:57365480-57365499	MS.gene61945:CDS	35.0%
!	TTGCAACCATGTTTTGCATT+TGG	-	chr5.2:57365217-57365236	None:intergenic	35.0%
!!!	ATGTTTTTGGCTGAAATGGT+TGG	-	chr5.2:57365350-57365369	None:intergenic	35.0%
	ACAAAGCTGAGCATAAGATG+AGG	-	chr5.2:57364636-57364655	None:intergenic	40.0%
	AGAGGTTCAGAAGAACCAAA+TGG	-	chr5.2:57365670-57365689	None:intergenic	40.0%
	ATACGGAGCTTGAAACACAT+TGG	-	chr5.2:57364149-57364168	None:intergenic	40.0%
	ATCACAAGCAACTCTGATGA+AGG	-	chr5.2:57365646-57365665	None:intergenic	40.0%
	ATGCAAATATCTAGCTGGAG+AGG	-	chr5.2:57365688-57365707	None:intergenic	40.0%
	CCATTTCAGCCAAAAACATG+GGG	+	chr5.2:57365351-57365370	MS.gene61945:CDS	40.0%
	CGACTTCAAAGAGACAATGA+AGG	-	chr5.2:57365407-57365426	None:intergenic	40.0%
	CTACCTGCTGTACTAAACTT+AGG	+	chr5.2:57365104-57365123	MS.gene61945:CDS	40.0%
	CTTGGATATTGTAACTGGCA+AGG	-	chr5.2:57366103-57366122	None:intergenic	40.0%
	GAGTTGCTTGTGATTCCATT+TGG	+	chr5.2:57365652-57365671	MS.gene61945:CDS	40.0%
	GATAGTAATGCCGTCTTTAG+AGG	-	chr5.2:57364610-57364629	None:intergenic	40.0%
	GCAATCAAGCAAATTAGGGT+TGG	-	chr5.2:57364033-57364052	None:intergenic	40.0%
	GTTCTTCAAGAGGAAACTGA+GGG	+	chr5.2:57365442-57365461	MS.gene61945:CDS	40.0%
	TACAGCGGTATAGCTAATAG+CGG	-	chr5.2:57364898-57364917	None:intergenic	40.0%
	TATACTCCTCAGATTAGGTG+TGG	-	chr5.2:57364295-57364314	None:intergenic	40.0%
	TATTGTAACTGGCAAGGGTA+CGG	-	chr5.2:57366097-57366116	None:intergenic	40.0%
	TGAAAGACGGGAATAGTCAA+GGG	-	chr5.2:57364071-57364090	None:intergenic	40.0%
	TGTGGTATACTCCTCAGATT+AGG	-	chr5.2:57364300-57364319	None:intergenic	40.0%
	TGTTCTTCAAGAGGAAACTG+AGG	+	chr5.2:57365441-57365460	MS.gene61945:CDS	40.0%
	TTATCAACAGTGCCATCGTA+AGG	-	chr5.2:57364208-57364227	None:intergenic	40.0%
	TTCTTCTCAAAACGCTACAG+CGG	-	chr5.2:57364913-57364932	None:intergenic	40.0%
	TTGTAGGATCCAGGAAAGAA+TGG	+	chr5.2:57364652-57364671	MS.gene61945:intron	40.0%
!	ATGCCGTCTTTAGAGGAATT+TGG	-	chr5.2:57364603-57364622	None:intergenic	40.0%
!	ATGTCTAATCTGGAGCATGA+GGG	-	chr5.2:57364324-57364343	None:intergenic	40.0%
!	CATCTTATGCTCAGCTTTGT+AGG	+	chr5.2:57364636-57364655	MS.gene61945:intron	40.0%
!	CCTTGATTTTCTCGCTTTAG+AGG	+	chr5.2:57364575-57364594	MS.gene61945:intron	40.0%
!	GAGCCAAATTCCTCTAAAGA+CGG	+	chr5.2:57364597-57364616	MS.gene61945:intron	40.0%
!!	CCTCTAAAGCGAGAAAATCA+AGG	-	chr5.2:57364578-57364597	None:intergenic	40.0%
	AAAGAGGGCAGTAACATGGA+AGG	-	chr5.2:57365291-57365310	None:intergenic	45.0%
	ATACTCGGACTCAGAAGAGT+TGG	-	chr5.2:57365536-57365555	None:intergenic	45.0%
	ATCTACGTAGAAGACCTGAC+TGG	+	chr5.2:57365942-57365961	MS.gene61945:CDS	45.0%
	CAAAGTCACAGCCAGAAAGA+GGG	-	chr5.2:57365306-57365325	None:intergenic	45.0%
	CATTGACGGTAAGCAACTAG+AGG	+	chr5.2:57366067-57366086	MS.gene61945:CDS	45.0%
	CGGTATAGCTAATAGCGGTA+TGG	-	chr5.2:57364893-57364912	None:intergenic	45.0%
	CTCCGTATTCAATAGTGTCC+CGG	+	chr5.2:57364161-57364180	MS.gene61945:intron	45.0%
	CTGAAAGACGGGAATAGTCA+AGG	-	chr5.2:57364072-57364091	None:intergenic	45.0%
	CTTGACTATTCCCGTCTTTC+AGG	+	chr5.2:57364070-57364089	MS.gene61945:CDS	45.0%
	GAGCAACGTCTGATCATTGA+CGG	+	chr5.2:57366053-57366072	MS.gene61945:CDS	45.0%
	GAGTTGCTAAAGCAACCTGT+TGG	-	chr5.2:57365624-57365643	None:intergenic	45.0%
	GCCAAAAACATGGGGATTCT+CGG	+	chr5.2:57365359-57365378	MS.gene61945:CDS	45.0%
	GCTCCTAAGTTTAGTACAGC+AGG	-	chr5.2:57365110-57365129	None:intergenic	45.0%
	GGTCATGCTCATGTCTAATC+TGG	-	chr5.2:57364334-57364353	None:intergenic	45.0%
	GTCCGGGACACTATTGAATA+CGG	-	chr5.2:57364166-57364185	None:intergenic	45.0%
	GTGTCTCTATAGGGACAACT+TGG	-	chr5.2:57364682-57364701	None:intergenic	45.0%
	TACTCGGACTCAGAAGAGTT+GGG	-	chr5.2:57365535-57365554	None:intergenic	45.0%
!	CATGTCTAATCTGGAGCATG+AGG	-	chr5.2:57364325-57364344	None:intergenic	45.0%
!	CTTGGTTCTCCATTCTTTCC+TGG	-	chr5.2:57364664-57364683	None:intergenic	45.0%
!	GGAGTCAATATTTGCTGCGT+TGG	+	chr5.2:57365508-57365527	MS.gene61945:CDS	45.0%
!	TCCATGTCGTGTTTTGTGTC+CGG	-	chr5.2:57364183-57364202	None:intergenic	45.0%
!	TCCGAGAATCCCCATGTTTT+TGG	-	chr5.2:57365363-57365382	None:intergenic	45.0%
!	TGTCTAATCTGGAGCATGAG+GGG	-	chr5.2:57364323-57364342	None:intergenic	45.0%
!	TTTTGCGAAGAACGTCCAAC+AGG	+	chr5.2:57365606-57365625	MS.gene61945:CDS	45.0%
!!	AAAGGAGATAGGAGGTACCA+TGG	-	chr5.2:57365716-57365735	None:intergenic	45.0%
!!	AAGGAGATAGGAGGTACCAT+GGG	-	chr5.2:57365715-57365734	None:intergenic	45.0%
!!	AGATCCACGCTTTTGGGAAA+TGG	+	chr5.2:57365487-57365506	MS.gene61945:CDS	45.0%
!!!	CCCCATGTTTTTGGCTGAAA+TGG	-	chr5.2:57365354-57365373	None:intergenic	45.0%
	ACAGGTGACCCAACGAATCT+TGG	+	chr5.2:57364358-57364377	MS.gene61945:intron	50.0%
	ACGACATGGACACCTTACGA+TGG	+	chr5.2:57364193-57364212	MS.gene61945:intron	50.0%
	AGAGAAGTCAACCATCAGCC+TGG	+	chr5.2:57366121-57366140	MS.gene61945:CDS	50.0%
	ATCAGACGTTGCTCGTGCAT+TGG	-	chr5.2:57366047-57366066	None:intergenic	50.0%
	ATTCGTTGGGTCACCTGTCA+CGG	-	chr5.2:57364356-57364375	None:intergenic	50.0%
	CCAGAAAGAGGGCAGTAACA+TGG	-	chr5.2:57365295-57365314	None:intergenic	50.0%
	CCATGTTACTGCCCTCTTTC+TGG	+	chr5.2:57365292-57365311	MS.gene61945:CDS	50.0%
	GACTCCATTTCCCAAAAGCG+TGG	-	chr5.2:57365494-57365513	None:intergenic	50.0%
	GCAAAGTCACAGCCAGAAAG+AGG	-	chr5.2:57365307-57365326	None:intergenic	50.0%
	GTCTGAACTCTCAACCCTCA+GGG	-	chr5.2:57365979-57365998	None:intergenic	50.0%
	TCAGACGTTGCTCGTGCATT+GGG	-	chr5.2:57366046-57366065	None:intergenic	50.0%
	TCTGAACTCTCAACCCTCAG+GGG	-	chr5.2:57365978-57365997	None:intergenic	50.0%
	TGGAAAGACGATTCCCCTGA+GGG	+	chr5.2:57365962-57365981	MS.gene61945:CDS	50.0%
	TGTCTGAACTCTCAACCCTC+AGG	-	chr5.2:57365980-57365999	None:intergenic	50.0%
!	CCATGTCGTGTTTTGTGTCC+GGG	-	chr5.2:57364182-57364201	None:intergenic	50.0%
!	GGCTGATGGTTGACTTCTCT+TGG	-	chr5.2:57366121-57366140	None:intergenic	50.0%
!	TGCTCAGCTTTGTAGGATCC+AGG	+	chr5.2:57364643-57364662	MS.gene61945:intron	50.0%
	ACATGAGCATGACCCGTGAC+AGG	+	chr5.2:57364340-57364359	MS.gene61945:intron	55.0%
	CCCGGACACAAAACACGACA+TGG	+	chr5.2:57364179-57364198	MS.gene61945:intron	55.0%
	CTGGAAAGACGATTCCCCTG+AGG	+	chr5.2:57365961-57365980	MS.gene61945:CDS	55.0%
	GACACGCCACACCTAATCTG+AGG	+	chr5.2:57364286-57364305	MS.gene61945:intron	55.0%
	GGGGAATCGTCTTTCCAGTC+AGG	-	chr5.2:57365959-57365978	None:intergenic	55.0%
	TTCGTTGGGTCACCTGTCAC+GGG	-	chr5.2:57364355-57364374	None:intergenic	55.0%
!	AATCTGGAGCATGAGGGGTG+TGG	-	chr5.2:57364318-57364337	None:intergenic	55.0%
	AGCCTGGTCCTCCGCCTCCA+TGG	+	chr5.2:57366137-57366156	MS.gene61945:CDS	70.0%
	GAGGCGGAGGACCAGGCTGA+TGG	-	chr5.2:57366135-57366154	None:intergenic	70.0%
	GCCTGGTCCTCCGCCTCCAT+GGG	+	chr5.2:57366138-57366157	MS.gene61945:CDS	70.0%
	TCCCATGGAGGCGGAGGACC+AGG	-	chr5.2:57366142-57366161	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.2	gene	57364011	57366166	57364011	ID=MS.gene61945
chr5.2	mRNA	57364011	57366166	57364011	ID=MS.gene61945.t1;Parent=MS.gene61945
chr5.2	exon	57364011	57364091	57364011	ID=MS.gene61945.t1.exon1;Parent=MS.gene61945.t1
chr5.2	CDS	57364011	57364091	57364011	ID=cds.MS.gene61945.t1;Parent=MS.gene61945.t1
chr5.2	exon	57365079	57365717	57365079	ID=MS.gene61945.t1.exon2;Parent=MS.gene61945.t1
chr5.2	CDS	57365079	57365717	57365079	ID=cds.MS.gene61945.t1;Parent=MS.gene61945.t1
chr5.2	exon	57365936	57366166	57365936	ID=MS.gene61945.t1.exon3;Parent=MS.gene61945.t1
chr5.2	CDS	57365936	57366166	57365936	ID=cds.MS.gene61945.t1;Parent=MS.gene61945.t1

Gene Sequence

>MS.gene61945

ATGGAGCCTTTGATGATTTCCAACCCTAATTTGCTTGATTGCTGCAAATGTTTTCAACCCTTGACTATTCCCGTCTTTCAGGTATGCATTTTCTTTTCATTTTTTCTTTCATAAATTATTTTCATATGAGAAGAGCCAATGTGTTTCAAGCTCCGTATTCAATAGTGTCCCGGACACAAAACACGACATGGACACCTTACGATGGCACTGTTGATAATTTGAAAAAATCACATAATTTAACGCAATTATTTGTGTCGGGTGTCGTGTAACAGTGCGACACGCCACACCTAATCTGAGGAGTATACCACACCCCTCATGCTCCAGATTAGACATGAGCATGACCCGTGACAGGTGACCCAACGAATCTTGGATAGTATTTGATATTTTCTTAGAATTTGTGTTGAGCATAAGGTGAAGAATGCCCCCCACTTATTTACTCATATCTAGGTCTTAACAAGTAATTCACTTTACAAGATAAATAAAGTATTATCAACCAAATAATTAGAAAATTAGAGATAAATATTAGAGGTACATCATAACAATCAAGAATTTTTAAGTTAACGACCTTGATTTTCTCGCTTTAGAGGAGCCAAATTCCTCTAAAGACGGCATTACTATCACTCCTCATCTTATGCTCAGCTTTGTAGGATCCAGGAAAGAATGGAGAACCAAGTTGTCCCTATAGAGACACAAAACACTTGAGGCGAAACAGAGATAGATGCATAACGGTCTAGTAGTGAATAGAGTGAGCATGACGACGATGAATAAGTTTCTATTTAAGTGTGAATGTCTTTAATTTTGTATATCCTTCTGCTTTTGAGTTTTTACATGTGTATGGTATGAATTTCTCTTATTGTTCCCTAAACTTTGATACAGCAACCATACCGCTATTAGCTATACCGCTGTAGCGTTTTGAGAAGAATATATTAAGAATGATTAGCTTTATATTGGTTATACTTTTGATTACAAAACTTGCTAACAAGCCTTGCAATGAATCTCTTATTTTATTCTAACAAATGGTTCAAAGTATAATTTGATGATTTTCTTTTATGTTGCACTACCTTTCAGTGTGATAATGGTCATATTGTTTGCTCTACCTGCTGTACTAAACTTAGGAGCAAGTGTCACGAGTGCTCGTTGCGCATTAGCTCAAAACGTTGTAAAGCCATTGAGAATCTATTGCTATCTATCGAACTGTCATGTCCAAATGCAAAACATGGTTGCAAGGAGAAAATAAGTTACACTGGAAATAGGAAGCATGAAGACGAATGCATCTACCTTCCATGTTACTGCCCTCTTTCTGGCTGTGACTTTGCTGCATCATCAGAAGTGTTGTCCAACCATTTCAGCCAAAAACATGGGGATTCTCGGATCAAATTTTCTTATGGTCACTCCTTCATTGTCTCTTTGAAGTCGAATGATGAAACCATTGTTCTTCAAGAGGAAACTGAGGGAAAACTATTTATTCTCAATAATAGATCCACGCTTTTGGGAAATGGAGTCAATATTTGCTGCGTTGGTCCCAACTCTTCTGAGTCCGAGTATAGTTATGATATATTGGCTAGGTCTCGGATATGCAAACTGACATTACAGTCTTTTGCGAAGAACGTCCAACAGGTTGCTTTAGCAACTCCTTCATCAGAGTTGCTTGTGATTCCATTTGGTTCTTCTGAACCTCTCCAGCTAGATATTTGCATAACTCCCATGGTACCTCCTATCTCCTTTTCTTTGTTTTTTTTTCTTTTTCAATTACATTTTTGTTATTTTCTTTTATGTTTTGAATTTATACTCTAGCATTTTATCTCAAATTCATCAGTTTTTAAAATGCGAAAACTAAGGTTGTTAGTGTTTTCTATTTTTGGATTAGTTCTTGAAATGTCAGTCTCAAATTTTCTTTTACCGATTTAATGGTATTTGTGGTGCAGATGCAAATCTACGTAGAAGACCTGACTGGAAAGACGATTCCCCTGAGGGTTGAGAGTTCAGACACAACAGTCGATGTGAAGAAGAAGATTCTTGACAAGGAAGGGATCCCAATGCACGAGCAACGTCTGATCATTGACGGTAAGCAACTAGAGGACAACCGTACCCTTGCCAGTTACAATATCCAAGAGAAGTCAACCATCAGCCTGGTCCTCCGCCTCCATGGGAGCTAG

Protein sequence

>MS.gene61945.t1

MEPLMISNPNLLDCCKCFQPLTIPVFQCDNGHIVCSTCCTKLRSKCHECSLRISSKRCKAIENLLLSIELSCPNAKHGCKEKISYTGNRKHEDECIYLPCYCPLSGCDFAASSEVLSNHFSQKHGDSRIKFSYGHSFIVSLKSNDETIVLQEETEGKLFILNNRSTLLGNGVNICCVGPNSSESEYSYDILARSRICKLTLQSFAKNVQQVALATPSSELLVIPFGSSEPLQLDICITPMMQIYVEDLTGKTIPLRVESSDTTVDVKKKILDKEGIPMHEQRLIIDGKQLEDNRTLASYNIQEKSTISLVLRLHGS