AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene04692


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04692.t1 MTR_7g094390 89.347 291 31 0 1 291 187 477 0.0 530
MS.gene04692.t1 MTR_7g024290 70.205 292 86 1 1 291 26 317 4.41e-146 413
MS.gene04692.t1 MTR_5g067400 69.310 290 89 0 1 290 26 315 8.00e-145 409
MS.gene04692.t1 MTR_1g046650 68.858 289 89 1 3 291 28 315 4.34e-141 400
MS.gene04692.t1 MTR_1g046640 68.858 289 89 1 3 291 28 315 1.54e-140 399
MS.gene04692.t1 MTR_1g046650 68.385 291 91 1 1 291 26 315 2.61e-140 398
MS.gene04692.t1 MTR_1g046650 68.385 291 91 1 1 291 57 346 4.74e-140 399
MS.gene04692.t1 MTR_5g076810 72.761 268 72 1 24 290 2 269 1.96e-139 394
MS.gene04692.t1 MTR_5g076505 64.966 294 100 1 1 291 22 315 1.63e-134 383
MS.gene04692.t1 MTR_5g076720 64.726 292 100 1 3 291 99 390 7.92e-132 379
MS.gene04692.t1 MTR_5g076520 67.458 295 90 3 3 291 28 322 9.28e-132 377
MS.gene04692.t1 MTR_2g038430 61.842 304 103 2 1 291 40 343 3.75e-128 368
MS.gene04692.t1 MTR_5g076370 63.230 291 104 1 1 288 49 339 8.14e-127 365
MS.gene04692.t1 MTR_5g061290 63.390 295 100 3 3 291 35 327 3.04e-125 360
MS.gene04692.t1 MTR_5g076660 64.261 291 101 1 1 288 48 338 1.02e-124 360
MS.gene04692.t1 MTR_2g038420 60.135 296 113 2 1 291 40 335 2.98e-119 345
MS.gene04692.t1 MTR_1g046650 66.802 247 81 1 45 291 1 246 8.90e-116 333
MS.gene04692.t1 MTR_5g076820 67.857 252 74 4 3 249 36 285 1.74e-113 329
MS.gene04692.t1 MTR_5g076540 70.936 203 59 0 1 203 26 228 3.44e-96 283
MS.gene04692.t1 MTR_5g077020 58.586 198 69 4 28 216 17 210 2.86e-71 219
MS.gene04692.t1 MTR_4g094468 44.131 213 114 3 3 212 114 324 5.87e-53 176
MS.gene04692.t1 MTR_4g058025 71.304 115 32 1 56 169 14 128 2.29e-51 167
MS.gene04692.t1 MTR_5g061310 64.935 77 27 0 215 291 1 77 2.58e-26 99.0
MS.gene04692.t1 MTR_7g105080 60.000 75 30 0 216 290 1 75 8.42e-23 91.7
MS.gene04692.t1 MTR_3g092130 60.000 75 30 0 216 290 1 75 8.42e-23 91.7
MS.gene04692.t1 MTR_1g059690 60.000 75 30 0 216 290 1 75 8.42e-23 91.7
MS.gene04692.t1 MTR_5g033960 60.000 75 30 0 216 290 1 75 1.01e-22 92.0
MS.gene04692.t1 MTR_8g088060 60.000 75 30 0 216 290 1 75 1.09e-22 92.0
MS.gene04692.t1 MTR_5g092700 60.000 75 30 0 216 290 1 75 1.21e-22 92.0
MS.gene04692.t1 MTR_5g092700 40.541 74 44 0 217 290 78 151 9.25e-12 62.4
MS.gene04692.t1 MTR_4g073580 60.000 75 30 0 216 290 1 75 1.21e-22 92.0
MS.gene04692.t1 MTR_4g073580 40.541 74 44 0 217 290 78 151 9.25e-12 62.4
MS.gene04692.t1 MTR_3g092130 60.000 75 30 0 216 290 1 75 1.92e-22 90.9
MS.gene04692.t1 MTR_4g073580 60.000 75 30 0 216 290 1 75 4.22e-22 91.3
MS.gene04692.t1 MTR_4g088485 55.294 85 38 0 206 290 128 212 5.02e-22 92.0
MS.gene04692.t1 MTR_4g088485 60.000 75 30 0 216 290 1 75 5.86e-22 91.7
MS.gene04692.t1 MTR_4g088485 42.353 85 34 1 206 290 67 136 7.94e-12 63.9
MS.gene04692.t1 MTR_1g066390 55.294 85 38 0 206 290 67 151 5.03e-22 92.4
MS.gene04692.t1 MTR_1g066390 55.294 85 38 0 206 290 143 227 5.03e-22 92.4
MS.gene04692.t1 MTR_1g066390 60.000 75 30 0 216 290 1 75 5.75e-22 92.0
MS.gene04692.t1 MTR_7g116360 55.294 85 38 0 206 290 67 151 6.07e-22 92.0
MS.gene04692.t1 MTR_7g116360 55.294 85 38 0 206 290 143 227 6.07e-22 92.0
MS.gene04692.t1 MTR_7g116360 60.000 75 30 0 216 290 1 75 6.79e-22 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 67 151 1.46e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 143 227 1.46e-21 92.0
MS.gene04692.t1 MTR_8g018230 60.000 75 30 0 216 290 1 75 1.74e-21 91.7
MS.gene04692.t1 MTR_7g116360 55.294 85 38 0 206 290 115 199 1.68e-21 92.0
MS.gene04692.t1 MTR_7g116360 55.294 85 38 0 206 290 191 275 1.68e-21 92.0
MS.gene04692.t1 MTR_7g116360 60.000 75 30 0 216 290 49 123 2.52e-21 91.3
MS.gene04692.t1 MTR_6g061930 55.294 85 38 0 206 290 67 151 1.96e-21 92.0
MS.gene04692.t1 MTR_6g061930 55.294 85 38 0 206 290 204 288 1.96e-21 92.0
MS.gene04692.t1 MTR_6g061930 60.000 75 30 0 216 290 1 75 2.28e-21 91.7
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 67 151 2.31e-21 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 143 227 2.31e-21 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 219 303 2.31e-21 92.0
MS.gene04692.t1 MTR_4g081010 60.000 75 30 0 216 290 1 75 2.58e-21 92.0
MS.gene04692.t1 MTR_4g080920 54.118 85 39 0 206 290 67 151 3.10e-21 90.1
MS.gene04692.t1 MTR_4g080920 58.667 75 31 0 216 290 1 75 7.48e-21 89.4
MS.gene04692.t1 MTR_4g080920 45.882 85 46 0 206 290 143 227 1.03e-15 75.1
MS.gene04692.t1 MTR_4g081010 60.000 75 30 0 216 290 1 75 4.08e-21 90.9
MS.gene04692.t1 MTR_4g081010 60.000 75 30 0 216 290 77 151 4.08e-21 90.9
MS.gene04692.t1 MTR_4g081010 60.000 75 30 0 216 290 153 227 4.08e-21 90.9
MS.gene04692.t1 MTR_8g081020 55.294 85 38 0 206 290 67 151 4.74e-21 92.0
MS.gene04692.t1 MTR_8g081020 55.294 85 38 0 206 290 143 227 4.74e-21 92.0
MS.gene04692.t1 MTR_8g081020 55.294 85 38 0 206 290 219 303 4.74e-21 92.0
MS.gene04692.t1 MTR_8g081020 55.294 85 38 0 206 290 295 379 4.74e-21 92.0
MS.gene04692.t1 MTR_8g081020 60.000 75 30 0 216 290 1 75 5.23e-21 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 67 151 4.93e-21 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 143 227 4.93e-21 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 219 303 4.93e-21 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 295 379 4.93e-21 92.0
MS.gene04692.t1 MTR_4g081010 60.000 75 30 0 216 290 1 75 5.39e-21 92.0
MS.gene04692.t1 MTR_4g080797 55.294 85 38 0 206 290 67 151 4.98e-21 92.0
MS.gene04692.t1 MTR_4g080797 55.294 85 38 0 206 290 143 227 4.98e-21 92.0
MS.gene04692.t1 MTR_4g080797 55.294 85 38 0 206 290 219 303 4.98e-21 92.0
MS.gene04692.t1 MTR_4g080797 55.294 85 38 0 206 290 295 379 4.98e-21 92.0
MS.gene04692.t1 MTR_4g080797 60.000 75 30 0 216 290 1 75 5.44e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 67 151 4.98e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 143 227 4.98e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 219 303 4.98e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 295 379 4.98e-21 92.0
MS.gene04692.t1 MTR_8g018230 60.000 75 30 0 216 290 1 75 5.44e-21 92.0
MS.gene04692.t1 MTR_4g091580 55.294 85 38 0 206 290 67 151 5.03e-21 92.0
MS.gene04692.t1 MTR_4g091580 55.294 85 38 0 206 290 143 227 5.03e-21 92.0
MS.gene04692.t1 MTR_4g091580 55.294 85 38 0 206 290 295 379 5.03e-21 92.0
MS.gene04692.t1 MTR_4g091580 60.000 75 30 0 216 290 1 75 5.50e-21 92.0
MS.gene04692.t1 MTR_4g091580 54.118 85 39 0 206 290 219 303 1.70e-20 90.5
MS.gene04692.t1 MTR_4g091580 55.294 85 38 0 206 290 295 379 5.09e-21 93.2
MS.gene04692.t1 MTR_4g091580 55.294 85 38 0 206 290 67 151 1.20e-20 92.0
MS.gene04692.t1 MTR_4g091580 55.294 85 38 0 206 290 143 227 1.20e-20 92.0
MS.gene04692.t1 MTR_4g091580 55.294 85 38 0 206 290 219 303 1.20e-20 92.0
MS.gene04692.t1 MTR_4g091580 55.294 85 38 0 206 290 371 455 1.20e-20 92.0
MS.gene04692.t1 MTR_4g091580 55.294 85 38 0 206 290 447 531 1.20e-20 92.0
MS.gene04692.t1 MTR_4g091580 60.000 75 30 0 216 290 1 75 1.25e-20 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 67 151 8.34e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 143 227 8.34e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 219 303 8.34e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 295 379 8.34e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 371 455 8.34e-21 92.0
MS.gene04692.t1 MTR_8g018230 60.000 75 30 0 216 290 1 75 8.92e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 67 151 8.34e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 143 227 8.34e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 219 303 8.34e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 295 379 8.34e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 371 455 8.34e-21 92.0
MS.gene04692.t1 MTR_8g018230 60.000 75 30 0 216 290 1 75 8.92e-21 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 67 151 1.06e-20 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 143 227 1.06e-20 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 219 303 1.06e-20 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 295 379 1.06e-20 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 371 455 1.06e-20 92.0
MS.gene04692.t1 MTR_8g018230 55.294 85 38 0 206 290 447 531 1.06e-20 92.0
MS.gene04692.t1 MTR_8g018230 60.000 75 30 0 216 290 1 75 1.13e-20 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 67 151 1.08e-20 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 143 227 1.08e-20 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 219 303 1.08e-20 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 295 379 1.08e-20 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 371 455 1.08e-20 92.0
MS.gene04692.t1 MTR_4g081010 55.294 85 38 0 206 290 447 531 1.08e-20 92.0
MS.gene04692.t1 MTR_4g081010 60.000 75 30 0 216 290 1 75 1.15e-20 92.0
MS.gene04692.t1 MTR_4g088495 55.294 85 38 0 206 290 67 151 1.38e-20 92.0
MS.gene04692.t1 MTR_4g088495 55.294 85 38 0 206 290 143 227 1.38e-20 92.0
MS.gene04692.t1 MTR_4g088495 55.294 85 38 0 206 290 219 303 1.38e-20 92.0
MS.gene04692.t1 MTR_4g088495 55.294 85 38 0 206 290 295 379 1.38e-20 92.0
MS.gene04692.t1 MTR_4g088495 55.294 85 38 0 206 290 371 455 1.38e-20 92.0
MS.gene04692.t1 MTR_4g088495 55.294 85 38 0 206 290 447 531 1.38e-20 92.0
MS.gene04692.t1 MTR_4g088495 55.294 85 38 0 206 290 523 607 1.38e-20 92.0
MS.gene04692.t1 MTR_4g088495 55.294 85 38 0 206 290 599 683 1.38e-20 92.0
MS.gene04692.t1 MTR_4g088495 55.294 85 38 0 206 290 675 759 1.38e-20 92.0
MS.gene04692.t1 MTR_4g088495 55.294 85 38 0 206 290 751 835 1.38e-20 92.0
MS.gene04692.t1 MTR_4g088495 60.000 75 30 0 216 290 1 75 2.07e-20 91.7
MS.gene04692.t1 MTR_4g009980 53.731 67 31 0 225 291 5 71 5.93e-20 82.0
MS.gene04692.t1 MTR_7g085590 29.697 165 105 2 3 167 80 233 7.70e-19 84.7
MS.gene04692.t1 MTR_5g076740 58.228 79 30 2 216 291 86 164 8.70e-19 82.0
MS.gene04692.t1 MTR_5g076350 51.899 79 38 0 213 291 6 84 2.28e-18 78.6
MS.gene04692.t1 MTR_8g479250 55.294 85 38 0 206 290 131 215 3.08e-18 83.2
MS.gene04692.t1 MTR_5g076340 53.846 78 34 2 216 291 9 86 1.57e-16 73.6
MS.gene04692.t1 MTR_3g017590 31.452 124 79 3 3 123 70 190 5.40e-16 77.0
MS.gene04692.t1 MTR_8g038370 28.646 192 127 6 3 184 129 320 1.67e-15 76.3
MS.gene04692.t1 MTR_5g076760 61.404 57 22 0 226 282 5 61 2.39e-15 70.1
MS.gene04692.t1 MTR_8g027520 34.483 116 73 2 3 115 70 185 2.35e-14 72.4
MS.gene04692.t1 MTR_8g027520 34.483 116 73 2 3 115 61 176 2.88e-14 72.0
MS.gene04692.t1 MTR_3g091510 33.621 116 74 2 3 115 77 192 4.49e-14 71.6
MS.gene04692.t1 MTR_1g054335 29.333 150 100 3 3 146 75 224 9.38e-14 70.5
MS.gene04692.t1 MTR_1g008120 33.621 116 74 2 3 115 85 200 1.76e-13 70.1
MS.gene04692.t1 MTR_7g117415 31.897 116 76 2 3 115 78 193 8.57e-13 68.2
MS.gene04692.t1 MTR_5g076780 55.357 56 25 0 230 285 4 59 1.13e-12 62.4
MS.gene04692.t1 MTR_7g093600 30.702 114 76 2 3 113 76 189 2.50e-12 66.6
MS.gene04692.t1 MTR_7g085080 57.143 56 24 0 215 270 8 63 1.97e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04692.t1 AT5G37930 34.404 218 135 3 1 212 125 340 3.89e-38 138
MS.gene04692.t1 AT5G37890 32.338 201 132 3 3 199 65 265 1.16e-29 114
MS.gene04692.t1 AT1G66630 33.171 205 130 4 3 200 63 267 2.07e-29 114
MS.gene04692.t1 AT1G66620 30.734 218 142 3 3 212 58 274 4.16e-29 113
MS.gene04692.t1 AT5G37870 34.132 167 107 3 3 166 59 225 1.32e-28 111
MS.gene04692.t1 AT1G66650 32.500 160 102 2 1 154 98 257 1.03e-23 99.0
MS.gene04692.t1 AT1G23410 60.000 75 30 0 216 290 1 75 9.17e-23 92.4
MS.gene04692.t1 AT2G47110 60.000 75 30 0 216 290 1 75 1.03e-22 92.4
MS.gene04692.t1 AT2G47110 60.000 75 30 0 216 290 1 75 1.03e-22 92.4
MS.gene04692.t1 AT4G05050 55.294 85 38 0 206 290 67 151 1.15e-22 92.0
MS.gene04692.t1 AT4G05050 60.000 75 30 0 216 290 1 75 1.32e-22 91.7
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 67 151 1.15e-22 92.0
MS.gene04692.t1 AT4G05320 60.000 75 30 0 216 290 1 75 1.32e-22 91.7
MS.gene04692.t1 AT3G62250 60.000 75 30 0 216 290 1 75 1.25e-22 92.0
MS.gene04692.t1 AT3G52590 60.000 75 30 0 216 290 1 75 1.47e-22 90.9
MS.gene04692.t1 AT2G36170 60.000 75 30 0 216 290 1 75 1.47e-22 90.9
MS.gene04692.t1 AT2G35635 60.000 75 30 0 216 290 1 75 1.60e-22 91.7
MS.gene04692.t1 AT2G35635 39.189 74 45 0 217 290 78 151 7.01e-11 60.1
MS.gene04692.t1 AT1G31340 60.000 75 30 0 216 290 1 75 1.88e-22 91.7
MS.gene04692.t1 AT1G31340 40.541 74 44 0 217 290 78 151 7.12e-12 62.8
MS.gene04692.t1 AT5G37910 28.780 205 140 4 1 199 50 254 3.04e-22 94.0
MS.gene04692.t1 AT4G05050 55.294 85 38 0 206 290 67 151 6.35e-22 92.0
MS.gene04692.t1 AT4G05050 55.294 85 38 0 206 290 143 227 6.35e-22 92.0
MS.gene04692.t1 AT4G05050 60.000 75 30 0 216 290 1 75 7.11e-22 92.0
MS.gene04692.t1 AT4G05050 55.294 85 38 0 206 290 67 151 6.35e-22 92.0
MS.gene04692.t1 AT4G05050 55.294 85 38 0 206 290 143 227 6.35e-22 92.0
MS.gene04692.t1 AT4G05050 60.000 75 30 0 216 290 1 75 7.11e-22 92.0
MS.gene04692.t1 AT4G05050 55.294 85 38 0 206 290 67 151 6.35e-22 92.0
MS.gene04692.t1 AT4G05050 55.294 85 38 0 206 290 143 227 6.35e-22 92.0
MS.gene04692.t1 AT4G05050 60.000 75 30 0 216 290 1 75 7.11e-22 92.0
MS.gene04692.t1 AT4G02890 55.294 85 38 0 206 290 67 151 6.35e-22 92.0
MS.gene04692.t1 AT4G02890 55.294 85 38 0 206 290 143 227 6.35e-22 92.0
MS.gene04692.t1 AT4G02890 60.000 75 30 0 216 290 1 75 7.11e-22 92.0
MS.gene04692.t1 AT4G02890 55.294 85 38 0 206 290 67 151 6.35e-22 92.0
MS.gene04692.t1 AT4G02890 55.294 85 38 0 206 290 143 227 6.35e-22 92.0
MS.gene04692.t1 AT4G02890 60.000 75 30 0 216 290 1 75 7.11e-22 92.0
MS.gene04692.t1 AT5G37640 55.294 85 38 0 206 290 69 153 7.58e-22 93.6
MS.gene04692.t1 AT5G37640 54.118 85 39 0 206 290 145 229 2.62e-19 86.7
MS.gene04692.t1 AT5G37640 57.895 76 31 1 216 290 231 306 7.27e-18 82.4
MS.gene04692.t1 AT5G37640 54.667 75 34 0 216 290 3 77 1.96e-15 75.9
MS.gene04692.t1 AT1G55060 58.667 75 31 0 216 290 77 151 2.09e-21 90.5
MS.gene04692.t1 AT1G55060 52.941 85 40 0 206 290 143 227 1.25e-19 85.9
MS.gene04692.t1 AT1G55060 54.667 75 34 0 216 290 1 75 3.54e-18 82.0
MS.gene04692.t1 AT5G03240 55.294 85 38 0 206 290 67 151 2.11e-21 92.0
MS.gene04692.t1 AT5G03240 55.294 85 38 0 206 290 143 227 2.11e-21 92.0
MS.gene04692.t1 AT5G03240 55.294 85 38 0 206 290 219 303 2.11e-21 92.0
MS.gene04692.t1 AT5G03240 60.000 75 30 0 216 290 1 75 2.36e-21 92.0
MS.gene04692.t1 AT5G03240 55.294 85 38 0 206 290 67 151 2.11e-21 92.0
MS.gene04692.t1 AT5G03240 55.294 85 38 0 206 290 143 227 2.11e-21 92.0
MS.gene04692.t1 AT5G03240 55.294 85 38 0 206 290 219 303 2.11e-21 92.0
MS.gene04692.t1 AT5G03240 60.000 75 30 0 216 290 1 75 2.36e-21 92.0
MS.gene04692.t1 AT5G03240 55.294 85 38 0 206 290 67 151 2.11e-21 92.0
MS.gene04692.t1 AT5G03240 55.294 85 38 0 206 290 143 227 2.11e-21 92.0
MS.gene04692.t1 AT5G03240 55.294 85 38 0 206 290 219 303 2.11e-21 92.0
MS.gene04692.t1 AT5G03240 60.000 75 30 0 216 290 1 75 2.36e-21 92.0
MS.gene04692.t1 AT5G20620 55.294 85 38 0 206 290 67 151 2.11e-21 92.0
MS.gene04692.t1 AT5G20620 55.294 85 38 0 206 290 143 227 2.11e-21 92.0
MS.gene04692.t1 AT5G20620 55.294 85 38 0 206 290 219 303 2.11e-21 92.0
MS.gene04692.t1 AT5G20620 60.000 75 30 0 216 290 1 75 2.36e-21 92.0
MS.gene04692.t1 AT1G65350 55.294 85 38 0 206 290 142 226 2.36e-21 92.4
MS.gene04692.t1 AT1G65350 60.000 75 30 0 216 290 1 75 2.79e-21 92.0
MS.gene04692.t1 AT1G65350 54.118 85 38 1 206 290 67 150 1.53e-18 84.3
MS.gene04692.t1 AT1G65350 45.455 99 40 1 206 290 218 316 1.06e-15 76.3
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 67 151 2.45e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 143 227 2.45e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 219 303 2.45e-21 92.0
MS.gene04692.t1 AT4G05320 60.000 75 30 0 216 290 1 75 2.70e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 67 151 2.45e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 143 227 2.45e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 219 303 2.45e-21 92.0
MS.gene04692.t1 AT4G05320 60.000 75 30 0 216 290 1 75 2.70e-21 92.0
MS.gene04692.t1 AT4G02890 55.294 85 38 0 206 290 67 151 2.45e-21 92.0
MS.gene04692.t1 AT4G02890 55.294 85 38 0 206 290 143 227 2.45e-21 92.0
MS.gene04692.t1 AT4G02890 55.294 85 38 0 206 290 219 303 2.45e-21 92.0
MS.gene04692.t1 AT4G02890 60.000 75 30 0 216 290 1 75 2.70e-21 92.0
MS.gene04692.t1 AT4G02890 55.294 85 38 0 206 290 67 151 2.45e-21 92.0
MS.gene04692.t1 AT4G02890 55.294 85 38 0 206 290 143 227 2.45e-21 92.0
MS.gene04692.t1 AT4G02890 55.294 85 38 0 206 290 219 303 2.45e-21 92.0
MS.gene04692.t1 AT4G02890 60.000 75 30 0 216 290 1 75 2.70e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 67 151 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 143 227 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 219 303 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 295 379 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 60.000 75 30 0 216 290 1 75 5.70e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 67 151 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 143 227 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 219 303 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 295 379 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 60.000 75 30 0 216 290 1 75 5.70e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 67 151 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 143 227 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 219 303 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 295 379 5.22e-21 92.0
MS.gene04692.t1 AT4G05320 60.000 75 30 0 216 290 1 75 5.70e-21 92.0
MS.gene04692.t1 AT5G20620 55.294 85 38 0 206 290 67 151 5.37e-21 92.0
MS.gene04692.t1 AT5G20620 55.294 85 38 0 206 290 143 227 5.37e-21 92.0
MS.gene04692.t1 AT5G20620 55.294 85 38 0 206 290 219 303 5.37e-21 92.0
MS.gene04692.t1 AT5G20620 55.294 85 38 0 206 290 295 379 5.37e-21 92.0
MS.gene04692.t1 AT5G20620 60.000 75 30 0 216 290 1 75 5.81e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 67 151 8.73e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 143 227 8.73e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 219 303 8.73e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 295 379 8.73e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 371 455 8.73e-21 92.0
MS.gene04692.t1 AT4G05320 60.000 75 30 0 216 290 1 75 9.34e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 67 151 8.73e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 143 227 8.73e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 219 303 8.73e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 295 379 8.73e-21 92.0
MS.gene04692.t1 AT4G05320 55.294 85 38 0 206 290 371 455 8.73e-21 92.0
MS.gene04692.t1 AT4G05320 60.000 75 30 0 216 290 1 75 9.34e-21 92.0
MS.gene04692.t1 AT5G62800 32.515 163 105 3 1 158 55 217 1.00e-20 90.9
MS.gene04692.t1 AT5G62800 32.515 163 105 3 1 158 55 217 1.34e-20 90.1
MS.gene04692.t1 AT1G53930 52.703 74 35 0 215 288 85 158 1.91e-19 83.6
MS.gene04692.t1 AT3G09790 55.294 85 38 0 206 290 69 153 3.05e-19 88.2
MS.gene04692.t1 AT3G09790 57.534 73 31 0 218 290 5 77 2.86e-18 85.1
MS.gene04692.t1 AT3G09790 56.164 73 32 0 216 288 552 624 8.55e-16 77.8
MS.gene04692.t1 AT3G09790 56.061 66 29 0 222 287 249 314 1.20e-14 74.3
MS.gene04692.t1 AT3G09790 54.795 73 31 2 216 286 319 391 8.52e-13 68.9
MS.gene04692.t1 AT3G09790 45.783 83 38 2 216 291 155 237 2.24e-11 64.7
MS.gene04692.t1 AT3G09790 55.294 85 38 0 206 290 69 153 3.05e-19 88.2
MS.gene04692.t1 AT3G09790 57.534 73 31 0 218 290 5 77 2.86e-18 85.1
MS.gene04692.t1 AT3G09790 56.164 73 32 0 216 288 552 624 8.55e-16 77.8
MS.gene04692.t1 AT3G09790 56.061 66 29 0 222 287 249 314 1.20e-14 74.3
MS.gene04692.t1 AT3G09790 54.795 73 31 2 216 286 319 391 8.52e-13 68.9
MS.gene04692.t1 AT3G09790 45.783 83 38 2 216 291 155 237 2.24e-11 64.7
MS.gene04692.t1 AT1G66660 31.818 154 97 3 3 149 120 272 1.07e-18 85.1
MS.gene04692.t1 AT1G66610 28.108 185 116 5 21 199 161 334 2.63e-14 72.8
MS.gene04692.t1 AT3G61790 31.897 116 76 2 3 115 77 192 3.76e-13 68.9
MS.gene04692.t1 AT1G53950 44.444 72 40 0 215 286 68 139 5.10e-13 65.9
MS.gene04692.t1 AT4G27880 32.759 116 75 2 3 115 78 193 5.73e-13 68.6
MS.gene04692.t1 AT3G58040 29.310 116 79 2 3 115 74 189 5.64e-12 64.3
MS.gene04692.t1 AT1G11980 38.667 75 46 0 216 290 1 75 9.30e-12 60.5
MS.gene04692.t1 AT3G58040 29.310 116 79 2 3 115 74 189 9.41e-12 64.7
MS.gene04692.t1 AT3G58040 29.310 116 79 2 3 115 74 189 9.41e-12 64.7
MS.gene04692.t1 AT2G41980 31.000 100 67 1 3 100 71 170 4.66e-11 62.8

Find 56 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTTGGATGTTGTAAT+TGG 0.203344 7.3:+16559934 None:intergenic
TATTAGAATCCCTGTGTTTA+TGG 0.246961 7.3:+16560769 None:intergenic
GGACTGACCATAAGAAAATT+TGG 0.280534 7.3:+16560746 None:intergenic
TTCGCACACGACTGAAATTT+CGG 0.286992 7.3:+16560537 None:intergenic
TCATGTTCGAATGCAAAATA+TGG 0.330815 7.3:-16560921 MS.gene04692:CDS
GGACACTTGTTCCTAAGTTT+AGG 0.336322 7.3:+16561014 None:intergenic
GCTGTTATCTAGTTCCTTAC+CGG 0.377727 7.3:+16559967 None:intergenic
CGAGTATGGTTATGATATAT+TGG 0.381319 7.3:-16560580 MS.gene04692:CDS
GAGTTCCTTGTGATTCCATT+TGG 0.383289 7.3:-16560477 MS.gene04692:CDS
GCAATCAATATTTGTTGCAT+TGG 0.386905 7.3:-16560621 MS.gene04692:CDS
ATTTGACGGTTGACTTCTCT+TGG 0.396408 7.3:+16559921 None:intergenic
AAGTCTTCTCAGTCCGAGTA+TGG 0.398368 7.3:-16560594 MS.gene04692:CDS
GTTGCAATTCAGTGTGATAA+TGG 0.405881 7.3:-16561062 MS.gene04692:intron
AGTTTCATCATTAGACTTCA+AGG 0.423958 7.3:+16560713 None:intergenic
CAAATTCGTCCTCCGCATCA+TGG 0.453984 7.3:-16559903 MS.gene04692:CDS
AAATTCGTCCTCCGCATCAT+GGG 0.461108 7.3:-16559902 MS.gene04692:CDS
CTTGGATGTTGTAATTGGCA+AGG 0.467473 7.3:+16559939 None:intergenic
ATATACATATTGACCATCAC+TGG 0.468346 7.3:-16560097 MS.gene04692:CDS
GTTCCTAAGTTTAGGATAGC+AGG 0.474052 7.3:+16561022 None:intergenic
GCTAATGCGCAATGAGCACT+TGG 0.479365 7.3:+16560992 None:intergenic
ATCAGACGCTGCATATGCAT+TGG 0.487180 7.3:+16559995 None:intergenic
GAGGGCAGTAGCACGGCTCA+TGG 0.499884 7.3:+16560844 None:intergenic
TGTCTGAACTCTTAACCCTC+AGG 0.500687 7.3:+16560062 None:intergenic
GATGCAACAAAGTCACAATC+TGG 0.507014 7.3:+16560819 None:intergenic
TACTCGGACTGAGAAGACTT+TGG 0.507820 7.3:+16560597 None:intergenic
TCAGACGCTGCATATGCATT+GGG 0.507914 7.3:+16559996 None:intergenic
CAATATATCATAACCATACT+CGG 0.508438 7.3:+16560581 None:intergenic
GGCGATCCTCTTTCCAGTGA+TGG 0.521029 7.3:+16560084 None:intergenic
AGAGGTTCAGAAGAACCAAA+TGG 0.531430 7.3:+16560462 None:intergenic
ACAAAGTCACAATCTGGCAG+AGG 0.531500 7.3:+16560825 None:intergenic
GATGCGGAGGACGAATTTGA+CGG 0.534213 7.3:+16559907 None:intergenic
CTACCTGCTATCCTAAACTT+AGG 0.540082 7.3:-16561025 MS.gene04692:CDS
GAACAAGTTACATTGGAAAG+AGG 0.546607 7.3:-16560887 MS.gene04692:CDS
GTTCTTCAAGAGAAAAGTGA+TGG 0.555772 7.3:-16560687 MS.gene04692:CDS
TTGGATGTTGTAATTGGCAA+GGG 0.555821 7.3:+16559940 None:intergenic
AGATAGCAATAGATTCTCAA+TGG 0.569736 7.3:+16560953 None:intergenic
GTCTGAACTCTTAACCCTCA+GGG 0.573038 7.3:+16560063 None:intergenic
ATGCAAATTTCTAGCTCGAG+AGG 0.574476 7.3:+16560444 None:intergenic
TATTGACCATCACTGGAAAG+AGG 0.575823 7.3:-16560090 MS.gene04692:CDS
AATTCGTCCTCCGCATCATG+GGG 0.592762 7.3:-16559901 MS.gene04692:CDS
AGCATGTCAACCATAAACAC+AGG 0.598137 7.3:-16560779 MS.gene04692:CDS
AGAGAGAGAACAAGTTACAT+TGG 0.598937 7.3:-16560894 MS.gene04692:CDS
TGGAAAGAGGATCGCCCTGA+GGG 0.604972 7.3:-16560077 MS.gene04692:CDS
AGACTTCAAGGAGACAATGA+AGG 0.605737 7.3:+16560725 None:intergenic
AAGAATCTTCTCCTTCACAT+TGG 0.613844 7.3:+16560033 None:intergenic
TCTGGCAGAGGGCAGTAGCA+CGG 0.619325 7.3:+16560837 None:intergenic
CAAAGTCACAATCTGGCAGA+GGG 0.635490 7.3:+16560826 None:intergenic
GAAGGAGAAGATTCTTGACA+AGG 0.642223 7.3:-16560026 MS.gene04692:CDS
AGACACGATAGCCAATGTGA+AGG 0.673184 7.3:-16560044 MS.gene04692:CDS
CGTGTGCGAATAATGTGCAA+CGG 0.684678 7.3:-16560524 MS.gene04692:CDS
AAGAACCAAATGGAATCACA+AGG 0.686822 7.3:+16560472 None:intergenic
CTGGAAAGAGGATCGCCCTG+AGG 0.691192 7.3:-16560078 MS.gene04692:CDS
GCATGTCAACCATAAACACA+GGG 0.694639 7.3:-16560778 MS.gene04692:CDS
CTAATGCGCAATGAGCACTT+GGG 0.698509 7.3:+16560993 None:intergenic
ATTCGTCCTCCGCATCATGG+GGG 0.715042 7.3:-16559900 MS.gene04692:CDS
GGATATAGGAGGTACCATGG+GGG 0.759816 7.3:+16560419 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAGATAATTCTTTATA+AGG + chr7.3:16561432-16561451 None:intergenic 10.0%
!! AATAAGATAATTCTTTATAA+GGG + chr7.3:16561431-16561450 None:intergenic 10.0%
!! GAAATTAAAATAAATAAAAG+TGG + chr7.3:16561143-16561162 None:intergenic 10.0%
!!! AAAAATAATAAGATTTTGAT+AGG + chr7.3:16562194-16562213 None:intergenic 10.0%
!!! ATAAAAAATAAGGAAAATTT+TGG - chr7.3:16560275-16560294 MS.gene04692:intron 10.0%
!! AACCATTTATTAGAAAATTA+AGG - chr7.3:16560670-16560689 MS.gene04692:CDS 15.0%
!! TTTGTTTCAATTAATAATTG+TGG + chr7.3:16560193-16560212 None:intergenic 15.0%
!!! ACTACTAAAACTATTATTTT+AGG + chr7.3:16560135-16560154 None:intergenic 15.0%
!!! ATCCTTAATTTTCTAATAAA+TGG + chr7.3:16560675-16560694 None:intergenic 15.0%
!!! CTTTAAAAATGAAATATTAG+AGG + chr7.3:16560231-16560250 None:intergenic 15.0%
!! AAAAAAAACAAGCAAAGAAA+AGG + chr7.3:16562170-16562189 None:intergenic 20.0%
!! AAATTAAGGATGAATATTAG+AGG - chr7.3:16560684-16560703 MS.gene04692:CDS 20.0%
!! ACAAAATACTTAGACAAAAA+AGG - chr7.3:16560843-16560862 MS.gene04692:CDS 20.0%
!!! AAACAGTAACATTCTTTTTT+TGG + chr7.3:16562273-16562292 None:intergenic 20.0%
!!! AATAATAGTACTATGCTTTT+TGG - chr7.3:16561917-16561936 MS.gene04692:intron 20.0%
!!! AGACTTTGATATTATCTTTT+AGG - chr7.3:16560508-16560527 MS.gene04692:CDS 20.0%
!!! GTTACTGTTTTTCTATTTTT+TGG - chr7.3:16562283-16562302 MS.gene04692:intron 20.0%
!!! TAGTTTTAGTAGTTTTATGT+AGG - chr7.3:16560142-16560161 MS.gene04692:intron 20.0%
!!! TCTAATACCAAATTTTCTTA+TGG - chr7.3:16561812-16561831 MS.gene04692:intron 20.0%
!!! TGCTGTAATAAATTTTACAA+TGG - chr7.3:16562380-16562399 MS.gene04692:intron 20.0%
!!! TTTATCATTGATTAATGTGT+TGG - chr7.3:16562425-16562444 MS.gene04692:intron 20.0%
!!! TTTTATTTTGTTTTAGCAAG+TGG - chr7.3:16561449-16561468 MS.gene04692:intron 20.0%
! AAAATTTATTACAGCACAAC+AGG + chr7.3:16562376-16562395 None:intergenic 25.0%
! AAACCAAATGTAAAGCAAAT+AGG + chr7.3:16561203-16561222 None:intergenic 25.0%
! AAATTTATTACAGCACAACA+GGG + chr7.3:16562375-16562394 None:intergenic 25.0%
! AACAAGTATTTCACTTTAGA+GGG - chr7.3:16560631-16560650 MS.gene04692:CDS 25.0%
! AACATATATGTATCCAACAA+CGG + chr7.3:16561375-16561394 None:intergenic 25.0%
! AATGAAATATTAGAGGAAGT+TGG + chr7.3:16560224-16560243 None:intergenic 25.0%
! CAATATATCATAACCATACT+CGG + chr7.3:16561987-16562006 None:intergenic 25.0%
! GTAATTCAAACTTACAAAAC+TGG - chr7.3:16560537-16560556 MS.gene04692:CDS 25.0%
! TAAATATGAGTCTATAAGCA+AGG + chr7.3:16560582-16560601 None:intergenic 25.0%
! TAACAAGTATTTCACTTTAG+AGG - chr7.3:16560630-16560649 MS.gene04692:CDS 25.0%
! TTGCTTATAGACTCATATTT+AGG - chr7.3:16560581-16560600 MS.gene04692:CDS 25.0%
! TTTCAAATTATTAGCTGTGT+CGG + chr7.3:16560983-16561002 None:intergenic 25.0%
!!! ACTTACAAAACTGGTTTTTA+AGG - chr7.3:16560546-16560565 MS.gene04692:CDS 25.0%
!!! TAATTTTCTCACTTTAGAAG+AGG - chr7.3:16560746-16560765 MS.gene04692:CDS 25.0%
AAAACGCTATATCAAAGTCT+AGG + chr7.3:16561336-16561355 None:intergenic 30.0%
AAACGCTATATCAAAGTCTA+GGG + chr7.3:16561335-16561354 None:intergenic 30.0%
ACAAGCAAAGAAAAGGATAT+AGG + chr7.3:16562163-16562182 None:intergenic 30.0%
AGAAGGATGTATAAAACTGT+AGG + chr7.3:16561267-16561286 None:intergenic 30.0%
AGAGATAGTGATTCTATCTA+AGG - chr7.3:16561115-16561134 MS.gene04692:intron 30.0%
AGATAGCAATAGATTCTCAA+TGG + chr7.3:16561615-16561634 None:intergenic 30.0%
AGTTTCATCATTAGACTTCA+AGG + chr7.3:16561855-16561874 None:intergenic 30.0%
ATATACATATTGACCATCAC+TGG - chr7.3:16562468-16562487 MS.gene04692:intron 30.0%
CATAAAAGCTCAAAAGTAGA+AGG + chr7.3:16561284-16561303 None:intergenic 30.0%
CGAGTATGGTTATGATATAT+TGG - chr7.3:16561985-16562004 MS.gene04692:intron 30.0%
GTTGTTGGATACATATATGT+TGG - chr7.3:16561374-16561393 MS.gene04692:intron 30.0%
TATTAGAATCCCTGTGTTTA+TGG + chr7.3:16561799-16561818 None:intergenic 30.0%
TCATGTTCGAATGCAAAATA+TGG - chr7.3:16561644-16561663 MS.gene04692:intron 30.0%
TCTACTGTATGTTTACTCTA+GGG - chr7.3:16560034-16560053 MS.gene04692:CDS 30.0%
TTCAGTGTAATTACAAGTGT+CGG - chr7.3:16561014-16561033 MS.gene04692:CDS 30.0%
TTCTACTGTATGTTTACTCT+AGG - chr7.3:16560033-16560052 MS.gene04692:CDS 30.0%
! AAGTATTTTGTGTCACCATA+TGG + chr7.3:16560834-16560853 None:intergenic 30.0%
! AGACTTTGATATAGCGTTTT+CGG - chr7.3:16561336-16561355 MS.gene04692:intron 30.0%
! ATATCAAATCTAGAGCGTAA+AGG + chr7.3:16560424-16560443 None:intergenic 30.0%
! CTTTTGAGCTTTTATGTGTA+TGG - chr7.3:16561288-16561307 MS.gene04692:intron 30.0%
! GCAATCAATATTTGTTGCAT+TGG - chr7.3:16561944-16561963 MS.gene04692:intron 30.0%
! TATCAAATCTAGAGCGTAAA+GGG + chr7.3:16560423-16560442 None:intergenic 30.0%
!!! CAAAACTGGTTTTTAAGGTA+AGG - chr7.3:16560551-16560570 MS.gene04692:CDS 30.0%
AAATTCCTCCACATCTTATG+CGG - chr7.3:16560770-16560789 MS.gene04692:CDS 35.0%
AAGAACCAAATGGAATCACA+AGG + chr7.3:16562096-16562115 None:intergenic 35.0%
AAGAATCTTCTCCTTCACAT+TGG + chr7.3:16562535-16562554 None:intergenic 35.0%
AGAGAGAGAACAAGTTACAT+TGG - chr7.3:16561671-16561690 MS.gene04692:intron 35.0%
AGCAAAGAAAAGGATATAGG+AGG + chr7.3:16562160-16562179 None:intergenic 35.0%
AGGCCTATTTGCTTTACATT+TGG - chr7.3:16561197-16561216 MS.gene04692:intron 35.0%
ATGTAGCAATCAAGCACTTT+AGG + chr7.3:16559939-16559958 None:intergenic 35.0%
CTTCTCTTGGATGTTGTAAT+TGG + chr7.3:16562634-16562653 None:intergenic 35.0%
GAACAAGTTACATTGGAAAG+AGG - chr7.3:16561678-16561697 MS.gene04692:intron 35.0%
GATGAATAAGCTATGAAGCA+CGG - chr7.3:16560922-16560941 MS.gene04692:CDS 35.0%
GGACTGACCATAAGAAAATT+TGG + chr7.3:16561822-16561841 None:intergenic 35.0%
GTTCTTCAAGAGAAAAGTGA+TGG - chr7.3:16561878-16561897 MS.gene04692:intron 35.0%
GTTGCAATTCAGTGTGATAA+TGG - chr7.3:16561503-16561522 MS.gene04692:intron 35.0%
TACTCAAAACCACAACACAA+CGG + chr7.3:16560361-16560380 None:intergenic 35.0%
TAGTGTGGTTATAACACCAA+GGG - chr7.3:16560379-16560398 MS.gene04692:intron 35.0%
TATCGACAACGGTAAACTAA+TGG - chr7.3:16560461-16560480 MS.gene04692:CDS 35.0%
TGTAGCAATCAAGCACTTTA+GGG + chr7.3:16559938-16559957 None:intergenic 35.0%
TTAAGACTCCCACATTGTAT+GGG + chr7.3:16560613-16560632 None:intergenic 35.0%
TTCTAGGCAGTAGAAAAGAA+AGG - chr7.3:16560795-16560814 MS.gene04692:CDS 35.0%
TTGGATGTTGTAATTGGCAA+GGG + chr7.3:16562628-16562647 None:intergenic 35.0%
! ACTTTGATATAGCGTTTTCG+GGG - chr7.3:16561338-16561357 MS.gene04692:intron 35.0%
! GACTTTGATATAGCGTTTTC+GGG - chr7.3:16561337-16561356 MS.gene04692:intron 35.0%
! GAGCGGATCTATTAAGTTTT+TGG - chr7.3:16560056-16560075 MS.gene04692:CDS 35.0%
! TACGCTCTAGATTTGATATC+TGG - chr7.3:16560425-16560444 MS.gene04692:intron 35.0%
!!! AGTTATTTTAAGCCTCAGAG+AGG - chr7.3:16561170-16561189 MS.gene04692:intron 35.0%
AGAAATTTGCATAACCCCCA+TGG - chr7.3:16562132-16562151 MS.gene04692:intron 40.0%
AGACTTCAAGGAGACAATGA+AGG + chr7.3:16561843-16561862 None:intergenic 40.0%
AGAGGTTCAGAAGAACCAAA+TGG + chr7.3:16562106-16562125 None:intergenic 40.0%
AGCATGTCAACCATAAACAC+AGG - chr7.3:16561786-16561805 MS.gene04692:intron 40.0%
ATGGATACGTACCTGAAAGA+CGG + chr7.3:16559985-16560004 None:intergenic 40.0%
CTACCTGCTATCCTAAACTT+AGG - chr7.3:16561540-16561559 MS.gene04692:intron 40.0%
CTTGGATGTTGTAATTGGCA+AGG + chr7.3:16562629-16562648 None:intergenic 40.0%
GAAGGAGAAGATTCTTGACA+AGG - chr7.3:16562539-16562558 MS.gene04692:intron 40.0%
GAGTTCCTTGTGATTCCATT+TGG - chr7.3:16562088-16562107 MS.gene04692:intron 40.0%
GATGCAACAAAGTCACAATC+TGG + chr7.3:16561749-16561768 None:intergenic 40.0%
GCATGTCAACCATAAACACA+GGG - chr7.3:16561787-16561806 MS.gene04692:intron 40.0%
GGACACTTGTTCCTAAGTTT+AGG + chr7.3:16561554-16561573 None:intergenic 40.0%
GTAGTGTGGTTATAACACCA+AGG - chr7.3:16560378-16560397 MS.gene04692:intron 40.0%
GTTAAGACTCCCACATTGTA+TGG + chr7.3:16560614-16560633 None:intergenic 40.0%
TAGGCAGTAGAAAAGAAAGG+AGG - chr7.3:16560798-16560817 MS.gene04692:CDS 40.0%
TATTGACCATCACTGGAAAG+AGG - chr7.3:16562475-16562494 MS.gene04692:intron 40.0%
TGAAAGACGGGAATGCTTAA+GGG + chr7.3:16559972-16559991 None:intergenic 40.0%
TTCGCACACGACTGAAATTT+CGG + chr7.3:16562031-16562050 None:intergenic 40.0%
TTGGAAATCACCACAGGAAT+GGG + chr7.3:16559915-16559934 None:intergenic 40.0%
! AGGCTTTATCCCATACAATG+TGG - chr7.3:16560601-16560620 MS.gene04692:CDS 40.0%
! ATTTGACGGTTGACTTCTCT+TGG + chr7.3:16562647-16562666 None:intergenic 40.0%
! GCTGTTATCTAGTTCCTTAC+CGG + chr7.3:16562601-16562620 None:intergenic 40.0%
! GGCTTTATCCCATACAATGT+GGG - chr7.3:16560602-16560621 MS.gene04692:CDS 40.0%
! GTTCCTAAGTTTAGGATAGC+AGG + chr7.3:16561546-16561565 None:intergenic 40.0%
! TGTATGTTTACTCTAGGGAG+CGG - chr7.3:16560039-16560058 MS.gene04692:CDS 40.0%
!! AAAGGATATAGGAGGTACCA+TGG + chr7.3:16562152-16562171 None:intergenic 40.0%
!! AAGGATATAGGAGGTACCAT+GGG + chr7.3:16562151-16562170 None:intergenic 40.0%
!! ATGCAAATTTCTAGCTCGAG+AGG + chr7.3:16562124-16562143 None:intergenic 40.0%
!! GTAATTACAAGTGTCGGTGT+CGG - chr7.3:16561020-16561039 MS.gene04692:CDS 40.0%
!!! TGTTGTGGTTTTGAGTAGTG+TGG - chr7.3:16560364-16560383 MS.gene04692:intron 40.0%
AAATTCGTCCTCCGCATCAT+GGG - chr7.3:16562663-16562682 MS.gene04692:intron 45.0%
AAGTCTTCTCAGTCCGAGTA+TGG - chr7.3:16561971-16561990 MS.gene04692:intron 45.0%
ACAAAGTCACAATCTGGCAG+AGG + chr7.3:16561743-16561762 None:intergenic 45.0%
ACGTTGCACTTGAGAGTCAT+GGG + chr7.3:16560332-16560351 None:intergenic 45.0%
AGACACGATAGCCAATGTGA+AGG - chr7.3:16562521-16562540 MS.gene04692:intron 45.0%
ATCAGACGCTGCATATGCAT+TGG + chr7.3:16562573-16562592 None:intergenic 45.0%
CAAAGTCACAATCTGGCAGA+GGG + chr7.3:16561742-16561761 None:intergenic 45.0%
CACATCTTATGCGGCTTTCT+AGG - chr7.3:16560779-16560798 MS.gene04692:CDS 45.0%
CGCGACTTAGTTATCGACAA+CGG - chr7.3:16560450-16560469 MS.gene04692:CDS 45.0%
CGTGTGCGAATAATGTGCAA+CGG - chr7.3:16562041-16562060 MS.gene04692:intron 45.0%
CTAATGCGCAATGAGCACTT+GGG + chr7.3:16561575-16561594 None:intergenic 45.0%
CTAGAAAGCCGCATAAGATG+TGG + chr7.3:16560781-16560800 None:intergenic 45.0%
CTGAAAGACGGGAATGCTTA+AGG + chr7.3:16559973-16559992 None:intergenic 45.0%
CTTAAGCATTCCCGTCTTTC+AGG - chr7.3:16559971-16559990 MS.gene04692:CDS 45.0%
GTCTGAACTCTTAACCCTCA+GGG + chr7.3:16562505-16562524 None:intergenic 45.0%
GTGTCACCATATGGACAACT+TGG + chr7.3:16560825-16560844 None:intergenic 45.0%
GTTGGAAATCACCACAGGAA+TGG + chr7.3:16559916-16559935 None:intergenic 45.0%
TAAGAATAGCCCCATTCCTG+TGG - chr7.3:16559902-16559921 MS.gene04692:CDS 45.0%
TAAGCTATGAAGCACGGACA+TGG - chr7.3:16560928-16560947 MS.gene04692:CDS 45.0%
TACTCGGACTGAGAAGACTT+TGG + chr7.3:16561971-16561990 None:intergenic 45.0%
TATGAAGCACGAACACTCCT+CGG + chr7.3:16561081-16561100 None:intergenic 45.0%
TCAGACGCTGCATATGCATT+GGG + chr7.3:16562572-16562591 None:intergenic 45.0%
TGGAAATCACCACAGGAATG+GGG + chr7.3:16559914-16559933 None:intergenic 45.0%
TGGATACGTACCTGAAAGAC+GGG + chr7.3:16559984-16560003 None:intergenic 45.0%
TGTCTGAACTCTTAACCCTC+AGG + chr7.3:16562506-16562525 None:intergenic 45.0%
TTAGGGTTGGAAATCACCAC+AGG + chr7.3:16559921-16559940 None:intergenic 45.0%
! ATGCAGCGTCTGATCTTTTC+CGG - chr7.3:16562579-16562598 MS.gene04692:intron 45.0%
! GGTTATAACACCAAGGGTGT+AGG - chr7.3:16560385-16560404 MS.gene04692:intron 45.0%
! TGTTTAGAGTCCTACACCCT+TGG + chr7.3:16560398-16560417 None:intergenic 45.0%
!! AGGATATAGGAGGTACCATG+GGG + chr7.3:16562150-16562169 None:intergenic 45.0%
!! GCAATCAAGCACTTTAGGGT+TGG + chr7.3:16559934-16559953 None:intergenic 45.0%
!! CAAAAAATAAAAAAATAAAA+TGG + chr7.3:16560004-16560023 None:intergenic 5.0%
!! TGTAAAAAAAATAAAAAATA+AGG - chr7.3:16560265-16560284 MS.gene04692:intron 5.0%
AATTCGTCCTCCGCATCATG+GGG - chr7.3:16562664-16562683 MS.gene04692:intron 50.0%
ACACAACACGTGTCTGACAC+TGG - chr7.3:16561043-16561062 MS.gene04692:CDS 50.0%
CAAATTCGTCCTCCGCATCA+TGG - chr7.3:16562662-16562681 MS.gene04692:intron 50.0%
CACAACACGTGTCTGACACT+GGG - chr7.3:16561044-16561063 MS.gene04692:CDS 50.0%
CACGTTGCACTTGAGAGTCA+TGG + chr7.3:16560333-16560352 None:intergenic 50.0%
CGTGAAACTCCGTTGTGTTG+TGG - chr7.3:16560349-16560368 MS.gene04692:intron 50.0%
GAAAGCCGCATAAGATGTGG+AGG + chr7.3:16560778-16560797 None:intergenic 50.0%
GATGCGGAGGACGAATTTGA+CGG + chr7.3:16562661-16562680 None:intergenic 50.0%
GCTAATGCGCAATGAGCACT+TGG + chr7.3:16561576-16561595 None:intergenic 50.0%
GGAGGACCAAGTTGTCCATA+TGG - chr7.3:16560816-16560835 MS.gene04692:CDS 50.0%
GTATAGCCACACCAAGCCAT+AGG - chr7.3:16560297-16560316 MS.gene04692:intron 50.0%
TTAAGCCTCAGAGAGGCTTG+AGG - chr7.3:16561177-16561196 MS.gene04692:intron 50.0%
TTGCACTTGAGAGTCATGGG+CGG + chr7.3:16560329-16560348 None:intergenic 50.0%
! GCGTCTGATCTTTTCCGGTA+AGG - chr7.3:16562584-16562603 MS.gene04692:intron 50.0%
!! ACCTATCCTATGGCTTGGTG+TGG + chr7.3:16560306-16560325 None:intergenic 50.0%
!! GGATATAGGAGGTACCATGG+GGG + chr7.3:16562149-16562168 None:intergenic 50.0%
ATAGGCCTCAAGCCTCTCTG+AGG + chr7.3:16561185-16561204 None:intergenic 55.0%
ATTCGTCCTCCGCATCATGG+GGG - chr7.3:16562665-16562684 MS.gene04692:intron 55.0%
GCACGAACACTCCTCGGATT+AGG + chr7.3:16561075-16561094 None:intergenic 55.0%
GCCACACCAAGCCATAGGAT+AGG - chr7.3:16560302-16560321 MS.gene04692:intron 55.0%
GGCGATCCTCTTTCCAGTGA+TGG + chr7.3:16562484-16562503 None:intergenic 55.0%
GGTCAGACGCAATCCGTTGT+TGG - chr7.3:16561359-16561378 MS.gene04692:intron 55.0%
TCATGGGCGGACCTATCCTA+TGG + chr7.3:16560316-16560335 None:intergenic 55.0%
TGAAGCACGGACATGGACAC+CGG - chr7.3:16560935-16560954 MS.gene04692:CDS 55.0%
TGGAAAGAGGATCGCCCTGA+GGG - chr7.3:16562488-16562507 MS.gene04692:intron 55.0%
ACTGGGACACGCCTAATCCG+AGG - chr7.3:16561061-16561080 MS.gene04692:intron 60.0%
CATGGACACCGGACACGACA+CGG - chr7.3:16560946-16560965 MS.gene04692:CDS 60.0%
CTGGAAAGAGGATCGCCCTG+AGG - chr7.3:16562487-16562506 MS.gene04692:intron 60.0%
GGCGGACCTATCCTATGGCT+TGG + chr7.3:16560311-16560330 None:intergenic 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG + chr7.3:16560957-16560976 None:intergenic 60.0%
TCTGGCAGAGGGCAGTAGCA+CGG + chr7.3:16561731-16561750 None:intergenic 60.0%
GAGGGCAGTAGCACGGCTCA+TGG + chr7.3:16561724-16561743 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 16559895 16562692 16559895 ID=MS.gene04692
chr7.3 mRNA 16559895 16562692 16559895 ID=MS.gene04692.t1;Parent=MS.gene04692
chr7.3 exon 16562687 16562692 16562687 ID=MS.gene04692.t1.exon1;Parent=MS.gene04692.t1
chr7.3 CDS 16562687 16562692 16562687 ID=cds.MS.gene04692.t1;Parent=MS.gene04692.t1
chr7.3 exon 16560434 16561072 16560434 ID=MS.gene04692.t1.exon2;Parent=MS.gene04692.t1
chr7.3 CDS 16560434 16561072 16560434 ID=cds.MS.gene04692.t1;Parent=MS.gene04692.t1
chr7.3 exon 16559895 16560125 16559895 ID=MS.gene04692.t1.exon3;Parent=MS.gene04692.t1
chr7.3 CDS 16559895 16560125 16559895 ID=cds.MS.gene04692.t1;Parent=MS.gene04692.t1
Gene Sequence

>MS.gene04692

ATGATGGTAAGAATAGCCCCATTCCTGTGGTGATTTCCAACCCTAAAGTGCTTGATTGCTACATTTGTTTTCAACCCTTAAGCATTCCCGTCTTTCAGGTACGTATCCATTTTATTTTTTTATTTTTTGTTCACTCTTTTCTACTGTATGTTTACTCTAGGGAGCGGATCTATTAAGTTTTTGGTGTGACTAAAATAATATTGTAAAAAAAAAAATTTAAGACTATGTACTATTTCACCTAAAATAATAGTTTTAGTAGTTTTATGTAGGCTAGTTTTATTAGTTCAAATACATACCACAATTATTAATTGAAACAAAATAAACAACCAACTTCCTCTAATATTTCATTTTTAAAGACATCTTTCATATATGTAAAAAAAATAAAAAATAAGGAAAATTTTGGTATAGCCACACCAAGCCATAGGATAGGTCCGCCCATGACTCTCAAGTGCAACGTGAAACTCCGTTGTGTTGTGGTTTTGAGTAGTGTGGTTATAACACCAAGGGTGTAGGACTCTAAACACACCCTTTACGCTCTAGATTTGATATCTGGAGCGCGACTTAGTTATCGACAACGGTAAACTAATGGTATGTAGTTCAACAGATTTTAGATAGACTTTGATATTATCTTTTAGGTTGAATGTAATTCAAACTTACAAAACTGGTTTTTAAGGTAAGGAATATCCTTGCTTATAGACTCATATTTAGGCTTTATCCCATACAATGTGGGAGTCTTAACAAGTATTTCACTTTAGAGGGTAAAGTAATTAATATCAACCATTTATTAGAAAATTAAGGATGAATATTAGAGGTACTTCGTTGCAATCAAGAGTTTATAATTTAATGATACTTAATTTTCTCACTTTAGAAGAGGCAAATTCCTCCACATCTTATGCGGCTTTCTAGGCAGTAGAAAAGAAAGGAGGACCAAGTTGTCCATATGGTGACACAAAATACTTAGACAAAAAAGGAGAAAGATGCATAACAAATTATGTCTAGTAGTGAAGAGAGTGAGCATGATGATGACGATGAATAAGCTATGAAGCACGGACATGGACACCGGACACGACACGGACACTGACACGCCGACACAGCTAATAATTTGAAAAAATAACATAATTCAGTGTAATTACAAGTGTCGGTGTCGGACACAACACGTGTCTGACACTGGGACACGCCTAATCCGAGGAGTGTTCGTGCTTCATAGTGAATAAGTGATTAGAGATAGTGATTCTATCTAAGGAACCACTTTTATTTATTTTAATTTCTTGAATGAGTTATTTTAAGCCTCAGAGAGGCTTGAGGCCTATTTGCTTTACATTTGGTTTGAATATCAGTAACAATGAACTTTGAATAATAATTATGAATGCCTACAGTTTTATACATCCTTCTACTTTTGAGCTTTTATGTGTATGGTATTAACATCTTGTATTGTTTCCCTAGACTTTGATATAGCGTTTTCGGGGTCAGACGCAATCCGTTGTTGGATACATATATGTTGGTTATACTTTTGATTGCAGAACTTGCTAACAACCCTTATAAAGAATTATCTTATTTTATTTTGTTTTAGCAAGTGGTTCAAAGTCTAATTTGATGATTTTCTTTTTTGTTGCAATTCAGTGTGATAATGGTCATATTGCTTGCTCTACCTGCTATCCTAAACTTAGGAACAAGTGTCCCAAGTGCTCATTGCGCATTAGCTCAAAACGTTGTAAAGCCATTGAGAATCTATTGCTATCTATTGAATTGTCATGTTCGAATGCAAAATATGGTTGCAGAGAGAGAACAAGTTACATTGGAAAGAGGAATCATGAAGAACAATGCATCCATGAGCCGTGCTACTGCCCTCTGCCAGATTGTGACTTTGTTGCATCATCAGAAGTGTTGTCTAAGCATGTCAACCATAAACACAGGGATTCTAATACCAAATTTTCTTATGGTCAGTCCTTCATTGTCTCCTTGAAGTCTAATGATGAAACTATTGTTCTTCAAGAGAAAAGTGATGGCAAACTATTTATTCTCAATAATAGTACTATGCTTTTTGGAAATGCAATCAATATTTGTTGCATTGGTCCAAAGTCTTCTCAGTCCGAGTATGGTTATGATATATTGGCTAGATCTCAAGCATGCAAACCGAAATTTCAGTCGTGTGCGAATAATGTGCAACGGTTTACTTTATCAACTCTTTCATTAGAGTTCCTTGTGATTCCATTTGGTTCTTCTGAACCTCTCGAGCTAGAAATTTGCATAACCCCCATGGTACCTCCTATATCCTTTTCTTTGCTTGTTTTTTTTTCCTATCAAAATCTTATTATTTTTTTTGTTTTGAATTTATACTCTAGCATTTAATCTCAAATTCATCAGTTTTTCAAATGCCAAAAAAAGAATGTTACTGTTTTTCTATTTTTTGGATTAGTTCTTGAAATATCAGTCTCAACTCAAATTTTCTTTTATTGATTTGATCATGAATTTCTTTTCCCTGTTGTGCTGTAATAAATTTTACAATGGATTTTGTTTTCTTTCTGTTGCTTTTATCATTGATTAATGTGTTGGCAAATGTCTTGCAGATGCTAATATACATATTGACCATCACTGGAAAGAGGATCGCCCTGAGGGTTAAGAGTTCAGACACGATAGCCAATGTGAAGGAGAAGATTCTTGACAAGGAAGAGATCCCAATGCATATGCAGCGTCTGATCTTTTCCGGTAAGGAACTAGATAACAGCTTGACCCTTGCCAATTACAACATCCAAGAGAAGTCAACCGTCAAATTCGTCCTCCGCATCATGGGGGATTAG

Protein sequence

>MS.gene04692.t1

MMCDNGHIACSTCYPKLRNKCPKCSLRISSKRCKAIENLLLSIELSCSNAKYGCRERTSYIGKRNHEEQCIHEPCYCPLPDCDFVASSEVLSKHVNHKHRDSNTKFSYGQSFIVSLKSNDETIVLQEKSDGKLFILNNSTMLFGNAINICCIGPKSSQSEYGYDILARSQACKPKFQSCANNVQRFTLSTLSLEFLVIPFGSSEPLELEICITPMMLIYILTITGKRIALRVKSSDTIANVKEKILDKEEIPMHMQRLIFSGKELDNSLTLANYNIQEKSTVKFVLRIMGD