AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063581


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063581.t1 MTR_5g076660 94.477 344 19 0 1 344 1 344 0.0 666
MS.gene063581.t1 MTR_5g067400 68.051 313 97 1 26 338 4 313 1.61e-148 421
MS.gene063581.t1 MTR_5g076370 64.012 339 121 1 1 338 1 339 5.81e-144 410
MS.gene063581.t1 MTR_7g024290 67.516 314 98 2 26 338 4 314 2.71e-142 405
MS.gene063581.t1 MTR_1g046640 66.454 313 101 2 26 338 4 312 1.47e-141 403
MS.gene063581.t1 MTR_1g046650 65.287 314 105 2 25 338 3 312 1.05e-138 396
MS.gene063581.t1 MTR_1g046650 65.287 314 105 2 25 338 34 343 2.24e-138 397
MS.gene063581.t1 MTR_7g094390 62.310 329 121 1 10 338 149 474 8.43e-137 397
MS.gene063581.t1 MTR_2g038430 59.824 341 121 3 10 337 2 339 1.35e-136 392
MS.gene063581.t1 MTR_5g076720 59.706 340 131 2 2 338 51 387 2.83e-134 388
MS.gene063581.t1 MTR_2g038420 60.778 334 123 3 10 338 2 332 5.79e-134 385
MS.gene063581.t1 MTR_1g046650 65.636 291 96 2 48 338 26 312 1.43e-126 365
MS.gene063581.t1 MTR_5g061290 58.824 323 122 4 22 338 7 324 2.31e-126 365
MS.gene063581.t1 MTR_5g076520 60.883 317 117 3 26 338 4 317 3.15e-123 357
MS.gene063581.t1 MTR_5g076810 68.030 269 82 2 71 338 2 267 1.58e-122 353
MS.gene063581.t1 MTR_5g076505 59.589 292 112 2 49 337 23 311 1.46e-113 332
MS.gene063581.t1 MTR_1g046650 65.587 247 81 2 92 338 1 243 4.44e-106 311
MS.gene063581.t1 MTR_5g076820 60.357 280 101 5 25 299 11 285 5.62e-104 307
MS.gene063581.t1 MTR_5g076540 64.574 223 79 0 26 248 4 226 1.97e-93 278
MS.gene063581.t1 MTR_4g094468 45.769 260 124 3 17 260 66 324 4.26e-72 227
MS.gene063581.t1 MTR_5g077020 61.658 193 60 4 80 264 22 208 1.24e-68 214
MS.gene063581.t1 MTR_4g058025 68.800 125 38 1 91 214 2 126 2.26e-49 164
MS.gene063581.t1 MTR_5g092700 69.863 73 22 0 266 338 1 73 6.81e-28 107
MS.gene063581.t1 MTR_5g092700 46.377 69 37 0 268 336 79 147 1.34e-12 65.1
MS.gene063581.t1 MTR_4g073580 69.863 73 22 0 266 338 1 73 6.81e-28 107
MS.gene063581.t1 MTR_4g073580 46.377 69 37 0 268 336 79 147 1.34e-12 65.1
MS.gene063581.t1 MTR_4g073580 69.863 73 22 0 266 338 1 73 2.02e-27 106
MS.gene063581.t1 MTR_5g033960 69.863 73 22 0 266 338 1 73 4.37e-27 104
MS.gene063581.t1 MTR_8g088060 69.863 73 22 0 266 338 1 73 4.41e-27 104
MS.gene063581.t1 MTR_4g088485 69.863 73 22 0 266 338 1 73 5.06e-27 106
MS.gene063581.t1 MTR_4g088485 69.863 73 22 0 266 338 138 210 5.06e-27 106
MS.gene063581.t1 MTR_4g088485 54.795 73 18 1 266 338 77 134 1.62e-16 77.8
MS.gene063581.t1 MTR_1g066390 69.863 73 22 0 266 338 1 73 5.12e-27 107
MS.gene063581.t1 MTR_1g066390 69.863 73 22 0 266 338 77 149 5.12e-27 107
MS.gene063581.t1 MTR_1g066390 69.863 73 22 0 266 338 153 225 5.12e-27 107
MS.gene063581.t1 MTR_7g105080 69.863 73 22 0 266 338 1 73 5.49e-27 103
MS.gene063581.t1 MTR_3g092130 69.863 73 22 0 266 338 1 73 5.49e-27 103
MS.gene063581.t1 MTR_1g059690 69.863 73 22 0 266 338 1 73 5.49e-27 103
MS.gene063581.t1 MTR_7g116360 69.863 73 22 0 266 338 1 73 7.59e-27 106
MS.gene063581.t1 MTR_7g116360 69.863 73 22 0 266 338 77 149 7.59e-27 106
MS.gene063581.t1 MTR_7g116360 69.863 73 22 0 266 338 153 225 7.59e-27 106
MS.gene063581.t1 MTR_7g116360 70.270 74 22 0 265 338 48 121 1.01e-26 107
MS.gene063581.t1 MTR_7g116360 63.855 83 30 0 256 338 115 197 3.22e-26 105
MS.gene063581.t1 MTR_7g116360 63.855 83 30 0 256 338 191 273 3.22e-26 105
MS.gene063581.t1 MTR_8g018230 63.855 83 30 0 256 338 67 149 1.43e-26 106
MS.gene063581.t1 MTR_8g018230 63.855 83 30 0 256 338 143 225 1.43e-26 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 1 73 1.46e-26 106
MS.gene063581.t1 MTR_3g092130 69.863 73 22 0 266 338 1 73 1.44e-26 102
MS.gene063581.t1 MTR_4g080920 62.651 83 31 0 256 338 67 149 1.85e-26 105
MS.gene063581.t1 MTR_4g080920 68.493 73 23 0 266 338 1 73 4.21e-26 104
MS.gene063581.t1 MTR_4g080920 52.326 86 40 1 256 340 143 228 8.85e-19 84.3
MS.gene063581.t1 MTR_6g061930 63.855 83 30 0 256 338 67 149 2.46e-26 106
MS.gene063581.t1 MTR_6g061930 63.855 83 30 0 256 338 204 286 2.46e-26 106
MS.gene063581.t1 MTR_6g061930 69.863 73 22 0 266 338 1 73 2.51e-26 106
MS.gene063581.t1 MTR_6g061930 49.398 83 27 1 256 338 143 210 4.93e-16 77.8
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 1 73 2.67e-26 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 77 149 2.67e-26 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 153 225 2.67e-26 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 229 301 2.67e-26 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 1 73 5.82e-26 105
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 77 149 5.82e-26 105
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 153 225 5.82e-26 105
MS.gene063581.t1 MTR_7g085590 27.092 251 162 6 14 260 47 280 6.16e-26 105
MS.gene063581.t1 MTR_4g091580 69.863 73 22 0 266 338 1 73 7.99e-26 106
MS.gene063581.t1 MTR_4g091580 69.863 73 22 0 266 338 77 149 7.99e-26 106
MS.gene063581.t1 MTR_4g091580 69.863 73 22 0 266 338 153 225 7.99e-26 106
MS.gene063581.t1 MTR_4g091580 69.863 73 22 0 266 338 305 377 7.99e-26 106
MS.gene063581.t1 MTR_4g091580 68.493 73 23 0 266 338 229 301 2.82e-25 105
MS.gene063581.t1 MTR_4g080797 69.863 73 22 0 266 338 1 73 8.40e-26 106
MS.gene063581.t1 MTR_4g080797 69.863 73 22 0 266 338 77 149 8.40e-26 106
MS.gene063581.t1 MTR_4g080797 69.863 73 22 0 266 338 153 225 8.40e-26 106
MS.gene063581.t1 MTR_4g080797 69.863 73 22 0 266 338 229 301 8.40e-26 106
MS.gene063581.t1 MTR_4g080797 69.863 73 22 0 266 338 305 377 8.40e-26 106
MS.gene063581.t1 MTR_8g081020 69.863 73 22 0 266 338 1 73 8.40e-26 106
MS.gene063581.t1 MTR_8g081020 69.863 73 22 0 266 338 77 149 8.40e-26 106
MS.gene063581.t1 MTR_8g081020 69.863 73 22 0 266 338 153 225 8.40e-26 106
MS.gene063581.t1 MTR_8g081020 69.863 73 22 0 266 338 229 301 8.40e-26 106
MS.gene063581.t1 MTR_8g081020 69.863 73 22 0 266 338 305 377 8.40e-26 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 1 73 8.40e-26 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 77 149 8.40e-26 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 153 225 8.40e-26 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 229 301 8.40e-26 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 305 377 8.40e-26 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 1 73 8.57e-26 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 77 149 8.57e-26 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 153 225 8.57e-26 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 229 301 8.57e-26 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 305 377 8.57e-26 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 1 73 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 77 149 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 153 225 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 229 301 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 305 377 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 381 453 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 1 73 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 77 149 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 153 225 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 229 301 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 305 377 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 381 453 1.90e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 1 73 2.75e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 77 149 2.75e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 153 225 2.75e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 229 301 2.75e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 305 377 2.75e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 381 453 2.75e-25 106
MS.gene063581.t1 MTR_8g018230 69.863 73 22 0 266 338 457 529 2.75e-25 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 1 73 2.80e-25 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 77 149 2.80e-25 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 153 225 2.80e-25 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 229 301 2.80e-25 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 305 377 2.80e-25 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 381 453 2.80e-25 106
MS.gene063581.t1 MTR_4g081010 69.863 73 22 0 266 338 457 529 2.80e-25 106
MS.gene063581.t1 MTR_4g091580 69.863 73 22 0 266 338 1 73 3.02e-25 106
MS.gene063581.t1 MTR_4g091580 69.863 73 22 0 266 338 77 149 3.02e-25 106
MS.gene063581.t1 MTR_4g091580 69.863 73 22 0 266 338 153 225 3.02e-25 106
MS.gene063581.t1 MTR_4g091580 69.863 73 22 0 266 338 229 301 3.02e-25 106
MS.gene063581.t1 MTR_4g091580 69.863 73 22 0 266 338 381 453 3.02e-25 106
MS.gene063581.t1 MTR_4g091580 69.863 73 22 0 266 338 457 529 3.02e-25 106
MS.gene063581.t1 MTR_4g091580 68.493 73 23 0 266 338 305 377 3.03e-24 103
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 77 149 4.20e-25 107
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 153 225 4.20e-25 107
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 229 301 4.20e-25 107
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 305 377 4.20e-25 107
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 381 453 4.20e-25 107
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 457 529 4.20e-25 107
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 533 605 4.20e-25 107
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 609 681 4.20e-25 107
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 685 757 4.20e-25 107
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 761 833 4.20e-25 107
MS.gene063581.t1 MTR_4g088495 69.863 73 22 0 266 338 1 73 7.22e-25 106
MS.gene063581.t1 MTR_1g054335 26.957 230 152 5 12 231 43 266 1.30e-23 99.4
MS.gene063581.t1 MTR_5g061310 62.500 72 27 0 266 337 2 73 5.08e-23 91.7
MS.gene063581.t1 MTR_8g038370 27.197 239 158 5 9 231 82 320 5.71e-23 98.6
MS.gene063581.t1 MTR_3g017590 26.778 239 159 5 9 231 23 261 6.88e-23 97.4
MS.gene063581.t1 MTR_7g093600 26.407 231 160 4 11 231 37 267 1.20e-22 96.7
MS.gene063581.t1 MTR_3g091510 27.854 219 148 4 23 231 50 268 6.70e-22 95.1
MS.gene063581.t1 MTR_1g008120 26.201 229 159 4 13 231 48 276 1.42e-20 91.3
MS.gene063581.t1 MTR_8g027520 30.899 178 117 3 22 193 33 210 1.84e-20 90.5
MS.gene063581.t1 MTR_8g027520 29.302 215 130 5 1 193 5 219 1.88e-20 90.9
MS.gene063581.t1 MTR_8g479250 63.855 83 30 0 256 338 131 213 2.13e-20 90.5
MS.gene063581.t1 MTR_8g479250 54.878 82 26 1 256 337 207 277 4.30e-18 84.0
MS.gene063581.t1 MTR_8g479250 76.190 42 10 0 266 307 1 42 1.35e-11 65.1
MS.gene063581.t1 MTR_7g117415 25.909 220 153 4 22 231 50 269 4.95e-19 86.7
MS.gene063581.t1 MTR_5g076740 57.895 76 29 2 265 337 85 160 2.95e-17 78.6
MS.gene063581.t1 MTR_5g076350 50.685 73 35 1 266 337 8 80 8.45e-15 69.3
MS.gene063581.t1 MTR_5g076760 58.621 58 24 0 276 333 5 62 2.24e-13 65.5
MS.gene063581.t1 MTR_5g076340 50.000 74 35 2 266 337 9 82 2.44e-13 65.5
MS.gene063581.t1 MTR_4g009980 46.875 64 34 0 275 338 5 68 8.75e-12 60.5
MS.gene063581.t1 MTR_5g076780 54.386 57 26 0 279 335 3 59 3.03e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063581.t1 AT5G37930 35.081 248 159 2 26 272 103 349 1.10e-46 162
MS.gene063581.t1 AT5G37870 32.824 262 168 7 14 268 21 281 6.70e-40 142
MS.gene063581.t1 AT5G37890 31.765 255 167 5 14 262 27 280 3.57e-38 138
MS.gene063581.t1 AT1G66650 33.200 250 157 5 25 265 75 323 6.80e-35 130
MS.gene063581.t1 AT1G66620 30.544 239 154 4 32 262 40 274 1.32e-34 129
MS.gene063581.t1 AT1G66630 30.116 259 160 5 25 262 38 296 2.12e-33 125
MS.gene063581.t1 AT5G37910 28.627 255 173 5 13 260 15 267 1.68e-31 120
MS.gene063581.t1 AT5G62800 35.079 191 119 3 20 205 27 217 5.18e-28 111
MS.gene063581.t1 AT5G62800 35.079 191 119 3 20 205 27 217 5.25e-28 112
MS.gene063581.t1 AT2G35635 69.863 73 22 0 266 338 1 73 8.66e-28 106
MS.gene063581.t1 AT2G35635 44.928 69 38 0 268 336 79 147 1.03e-11 62.8
MS.gene063581.t1 AT1G31340 69.863 73 22 0 266 338 1 73 1.12e-27 106
MS.gene063581.t1 AT1G31340 46.377 69 37 0 268 336 79 147 9.90e-13 65.9
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 1 73 1.25e-27 106
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 77 149 1.25e-27 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 1 73 1.25e-27 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 77 149 1.25e-27 106
MS.gene063581.t1 AT1G55060 71.233 73 21 0 266 338 77 149 1.66e-27 108
MS.gene063581.t1 AT1G55060 61.446 83 32 0 256 338 143 225 1.47e-24 100
MS.gene063581.t1 AT1G55060 67.123 73 24 0 266 338 1 73 1.75e-24 100
MS.gene063581.t1 AT1G23410 69.863 73 22 0 266 338 1 73 3.70e-27 105
MS.gene063581.t1 AT2G47110 69.863 73 22 0 266 338 1 73 4.18e-27 105
MS.gene063581.t1 AT2G47110 69.863 73 22 0 266 338 1 73 4.18e-27 105
MS.gene063581.t1 AT3G62250 69.863 73 22 0 266 338 1 73 4.68e-27 104
MS.gene063581.t1 AT3G52590 69.863 73 22 0 266 338 1 73 5.93e-27 103
MS.gene063581.t1 AT2G36170 69.863 73 22 0 266 338 1 73 5.93e-27 103
MS.gene063581.t1 AT1G66660 42.149 121 70 0 21 141 91 211 6.69e-27 109
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 1 73 7.95e-27 106
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 77 149 7.95e-27 106
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 153 225 7.95e-27 106
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 1 73 7.95e-27 106
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 77 149 7.95e-27 106
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 153 225 7.95e-27 106
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 1 73 7.95e-27 106
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 77 149 7.95e-27 106
MS.gene063581.t1 AT4G05050 69.863 73 22 0 266 338 153 225 7.95e-27 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 1 73 7.95e-27 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 77 149 7.95e-27 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 153 225 7.95e-27 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 1 73 7.95e-27 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 77 149 7.95e-27 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 153 225 7.95e-27 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 1 73 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 77 149 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 153 225 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 229 301 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 1 73 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 77 149 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 153 225 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 229 301 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 1 73 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 77 149 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 153 225 3.03e-26 106
MS.gene063581.t1 AT5G03240 69.863 73 22 0 266 338 229 301 3.03e-26 106
MS.gene063581.t1 AT5G20620 69.863 73 22 0 266 338 1 73 3.03e-26 106
MS.gene063581.t1 AT5G20620 69.863 73 22 0 266 338 77 149 3.03e-26 106
MS.gene063581.t1 AT5G20620 69.863 73 22 0 266 338 153 225 3.03e-26 106
MS.gene063581.t1 AT5G20620 69.863 73 22 0 266 338 229 301 3.03e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 1 73 3.06e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 77 149 3.06e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 153 225 3.06e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 229 301 3.06e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 1 73 3.06e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 77 149 3.06e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 153 225 3.06e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 229 301 3.06e-26 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 1 73 3.06e-26 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 77 149 3.06e-26 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 153 225 3.06e-26 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 229 301 3.06e-26 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 1 73 3.06e-26 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 77 149 3.06e-26 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 153 225 3.06e-26 106
MS.gene063581.t1 AT4G02890 69.863 73 22 0 266 338 229 301 3.06e-26 106
MS.gene063581.t1 AT1G65350 69.863 73 22 0 266 338 152 224 3.57e-26 106
MS.gene063581.t1 AT1G65350 69.863 73 22 0 266 338 1 73 4.11e-26 106
MS.gene063581.t1 AT1G65350 68.493 73 22 1 266 338 77 148 2.82e-23 98.6
MS.gene063581.t1 AT1G65350 56.322 87 24 1 266 338 228 314 1.57e-20 90.9
MS.gene063581.t1 AT5G37640 61.905 84 32 0 255 338 68 151 5.85e-26 106
MS.gene063581.t1 AT5G37640 60.241 83 33 0 256 338 145 227 2.14e-23 99.0
MS.gene063581.t1 AT5G37640 66.216 74 24 1 266 338 231 304 3.73e-22 95.5
MS.gene063581.t1 AT5G37640 58.904 73 30 0 266 338 3 75 9.20e-17 80.5
MS.gene063581.t1 AT5G20620 69.863 73 22 0 266 338 1 73 8.65e-26 106
MS.gene063581.t1 AT5G20620 69.863 73 22 0 266 338 77 149 8.65e-26 106
MS.gene063581.t1 AT5G20620 69.863 73 22 0 266 338 153 225 8.65e-26 106
MS.gene063581.t1 AT5G20620 69.863 73 22 0 266 338 229 301 8.65e-26 106
MS.gene063581.t1 AT5G20620 69.863 73 22 0 266 338 305 377 8.65e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 1 73 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 77 149 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 153 225 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 229 301 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 305 377 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 1 73 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 77 149 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 153 225 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 229 301 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 305 377 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 1 73 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 77 149 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 153 225 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 229 301 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 305 377 8.80e-26 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 1 73 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 77 149 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 153 225 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 229 301 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 305 377 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 381 453 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 1 73 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 77 149 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 153 225 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 229 301 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 305 377 1.99e-25 106
MS.gene063581.t1 AT4G05320 69.863 73 22 0 266 338 381 453 1.99e-25 106
MS.gene063581.t1 AT3G09790 59.036 83 34 0 256 338 69 151 2.51e-21 95.5
MS.gene063581.t1 AT3G09790 61.644 73 28 0 266 338 3 75 4.23e-20 91.7
MS.gene063581.t1 AT3G09790 61.842 76 29 0 266 341 552 627 1.35e-19 90.5
MS.gene063581.t1 AT3G09790 51.163 86 37 1 258 338 230 315 2.61e-16 80.5
MS.gene063581.t1 AT3G09790 53.623 69 32 0 266 334 393 461 1.02e-13 72.4
MS.gene063581.t1 AT3G09790 56.164 73 30 1 266 336 319 391 2.52e-13 71.2
MS.gene063581.t1 AT3G09790 51.250 80 32 2 266 338 155 234 6.02e-13 70.1
MS.gene063581.t1 AT3G09790 48.193 83 35 2 266 340 469 551 5.72e-12 67.4
MS.gene063581.t1 AT3G09790 59.036 83 34 0 256 338 69 151 2.51e-21 95.5
MS.gene063581.t1 AT3G09790 61.644 73 28 0 266 338 3 75 4.23e-20 91.7
MS.gene063581.t1 AT3G09790 61.842 76 29 0 266 341 552 627 1.35e-19 90.5
MS.gene063581.t1 AT3G09790 51.163 86 37 1 258 338 230 315 2.61e-16 80.5
MS.gene063581.t1 AT3G09790 53.623 69 32 0 266 334 393 461 1.02e-13 72.4
MS.gene063581.t1 AT3G09790 56.164 73 30 1 266 336 319 391 2.52e-13 71.2
MS.gene063581.t1 AT3G09790 51.250 80 32 2 266 338 155 234 6.02e-13 70.1
MS.gene063581.t1 AT3G09790 48.193 83 35 2 266 340 469 551 5.72e-12 67.4
MS.gene063581.t1 AT1G53930 51.515 99 36 1 252 338 60 158 5.84e-21 88.6
MS.gene063581.t1 AT3G61790 28.365 208 139 4 34 231 61 268 1.07e-20 91.7
MS.gene063581.t1 AT3G58040 25.506 247 170 6 34 266 58 304 1.75e-20 90.9
MS.gene063581.t1 AT3G58040 25.506 247 170 6 34 266 58 304 1.75e-20 90.9
MS.gene063581.t1 AT2G41980 25.506 247 170 6 34 266 55 301 1.87e-20 90.5
MS.gene063581.t1 AT4G27880 31.250 176 108 4 34 203 62 230 5.23e-20 89.7
MS.gene063581.t1 AT3G58040 32.576 132 86 2 34 162 58 189 2.95e-18 82.8
MS.gene063581.t1 AT5G37900 26.378 254 138 7 21 263 20 235 2.44e-17 80.5
MS.gene063581.t1 AT1G53950 50.704 71 35 0 266 336 69 139 1.73e-15 73.2
MS.gene063581.t1 AT1G66610 27.174 184 119 6 68 246 161 334 2.78e-13 70.5
MS.gene063581.t1 AT1G66610 43.750 64 36 0 32 95 52 115 3.20e-11 64.3
MS.gene063581.t1 AT1G66660 42.857 63 36 0 79 141 25 87 4.42e-12 65.5
MS.gene063581.t1 AT1G66610 43.750 64 36 0 32 95 52 115 3.27e-11 63.2
MS.gene063581.t1 AT1G11980 42.254 71 41 0 266 336 1 71 7.65e-11 58.2

Find 74 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTCGTCATTAGACTTTA+AGG 0.088199 5.2:-65217832 None:intergenic
CCATGTTACTGTCCCCTTTC+AGG 0.091947 5.2:+65217708 MS.gene063581:CDS
GTGATTCCATTTGGTCATTT+TGG 0.170097 5.2:+65218077 MS.gene063581:CDS
CTTCTCTTGGATGTTGTAAT+TGG 0.203344 5.2:-65218611 None:intergenic
CTTGAGTATCCCTGTGTTCC+AGG 0.289604 5.2:+65217024 MS.gene063581:CDS
TGTATGAACTCTCCACCTTC+AGG 0.297973 5.2:-65218483 None:intergenic
CTCAACCTCATTCTCCGTTT+CGG 0.322968 5.2:+65218640 MS.gene063581:CDS
CAATAATAGTATTGTGAGTC+TGG 0.323771 5.2:+65217896 MS.gene063581:CDS
TTCGAGAATCCTTGTGTTTG+TGG 0.338412 5.2:-65217776 None:intergenic
CCTTGTGTTTGTGGCTGAAA+TGG 0.346195 5.2:-65217767 None:intergenic
GTTGCAATTCAGTGTGTTAA+TGG 0.346811 5.2:+65217483 MS.gene063581:intron
GCAGTCAGCTAGTTCCTTAC+TGG 0.351608 5.2:-65218578 None:intergenic
GGTTGAGGGTTGACTTCTCT+TGG 0.401596 5.2:-65218624 None:intergenic
TTATCTTTATGGTAAGGATC+TGG 0.416182 5.2:-65218665 None:intergenic
AATTTCCTCGTGATTCCATT+TGG 0.426963 5.2:+65218068 MS.gene063581:CDS
AACGGTCTCTTCACAGTCTT+CGG 0.433010 5.2:-65216912 None:intergenic
AACAAAGTCACAACCTGAAA+GGG 0.437148 5.2:-65217721 None:intergenic
ACTCAAGGGTTGAAAACAAA+TGG 0.446637 5.2:-65217008 None:intergenic
GCGGTATCAGTATGATATAT+TGG 0.450936 5.2:+65217965 MS.gene063581:CDS
CTTGGATGTTGTAATTGGCA+AGG 0.467473 5.2:-65218606 None:intergenic
ACCAGACATTGCTGATCCAC+TGG 0.471572 5.2:-65218550 None:intergenic
GAAGAACCAAAATGACCAAA+TGG 0.476071 5.2:-65218083 None:intergenic
CCCAGTGGATCAGCAATGTC+TGG 0.478868 5.2:+65218549 MS.gene063581:CDS
CGAAACGGAGAATGAGGTTG+AGG 0.485080 5.2:-65218639 None:intergenic
GTAACGCGTTGGACATTCTT+CGG 0.485454 5.2:-65218026 None:intergenic
TGTTGTAATTGGCAAGGGTC+TGG 0.488063 5.2:-65218600 None:intergenic
ATGTCTGGTCTTTGCCAGTA+AGG 0.494266 5.2:+65218564 MS.gene063581:CDS
GTATGAACTCTCCACCTTCA+GGG 0.495237 5.2:-65218482 None:intergenic
TTGGATGTTGTAATTGGCAA+GGG 0.499588 5.2:-65218605 None:intergenic
ATACACAATAGCAAACTTGA+AGG 0.502955 5.2:+65218501 MS.gene063581:CDS
ATCTTCATAAAGACCCTGAC+TGG 0.503210 5.2:+65218448 MS.gene063581:CDS
GGGTAATTATCTTTATGGTA+AGG 0.503602 5.2:-65218671 None:intergenic
TACATGCATACCTGGAACAC+AGG 0.509128 5.2:-65217034 None:intergenic
GTCAAATGTTCTAATGGAGG+CGG 0.516670 5.2:+65216886 None:intergenic
GCGGTCAGTATTAGCTGCAT+TGG 0.518512 5.2:+65217924 MS.gene063581:CDS
GTTCCGATGTTTATCACAGC+AGG 0.526195 5.2:-65217523 None:intergenic
TTTCTCATTAACATCTTCTG+AGG 0.529895 5.2:-65216939 None:intergenic
AGACTTTAAGGAGACGATGA+AGG 0.531305 5.2:-65217820 None:intergenic
CGAAGCCATTGTTCTTCAAG+AGG 0.531922 5.2:+65217848 MS.gene063581:CDS
AATAATAGTATTGTGAGTCT+GGG 0.537905 5.2:+65217897 MS.gene063581:CDS
TACCGCGGCTCAGAATAGTT+AGG 0.541372 5.2:-65217948 None:intergenic
GACTCACAATACTATTATTG+AGG 0.541607 5.2:-65217893 None:intergenic
CAACAAAGTCACAACCTGAA+AGG 0.543438 5.2:-65217722 None:intergenic
AGATTGCAATAGATTCTCAA+TGG 0.546494 5.2:-65217592 None:intergenic
TGGAACCGAAACGGAGAATG+AGG 0.549486 5.2:-65218645 None:intergenic
ATCAGTATGATATATTGGCC+AGG 0.551747 5.2:+65217970 MS.gene063581:CDS
GGGGATGGTCTTTCCAGTCA+GGG 0.558585 5.2:-65218461 None:intergenic
TATGAACTCTCCACCTTCAG+GGG 0.565083 5.2:-65218481 None:intergenic
GTAAGGATCTGGAACCGAAA+CGG 0.573246 5.2:-65218654 None:intergenic
GTGTTTGTGGCTGAAATGGT+TGG 0.574309 5.2:-65217763 None:intergenic
GAAACGGAGAATGAGGTTGA+GGG 0.575290 5.2:-65218638 None:intergenic
CAAACTGCATATTTGAGACC+TGG 0.577484 5.2:-65217988 None:intergenic
TCAAATGTTCTAATGGAGGC+GGG 0.580408 5.2:+65216887 None:intergenic
CCAGACATTGCTGATCCACT+GGG 0.582091 5.2:-65218549 None:intergenic
AACATCTTCTGAGGAATCAA+CGG 0.588452 5.2:-65216930 None:intergenic
GAGCTGCTAAAGTAACGCGT+TGG 0.589550 5.2:-65218037 None:intergenic
CCATTTCAGCCACAAACACA+AGG 0.589670 5.2:+65217767 MS.gene063581:CDS
ACATTCCTCTTGAAGAACAA+TGG 0.594720 5.2:-65217853 None:intergenic
CCTGAAAGGGGACAGTAACA+TGG 0.599066 5.2:-65217708 None:intergenic
GCAATCAAATGCATTTGAGT+CGG 0.599653 5.2:-65216984 None:intergenic
CTGGAACACAGGGATACTCA+AGG 0.624737 5.2:-65217023 None:intergenic
AATATATCATACTGATACCG+CGG 0.628028 5.2:-65217963 None:intergenic
ACATGCATACCTGGAACACA+GGG 0.637928 5.2:-65217033 None:intergenic
TATTGTGAGTCTGGGAAATG+CGG 0.641228 5.2:+65217905 MS.gene063581:CDS
TGGAACACAGGGATACTCAA+GGG 0.643494 5.2:-65217022 None:intergenic
GTCCTAACTATTCTGAGCCG+CGG 0.645221 5.2:+65217946 MS.gene063581:CDS
ACAAAGTCACAACCTGAAAG+GGG 0.645303 5.2:-65217720 None:intergenic
GTTGGACAACACTTCTGATG+AGG 0.646668 5.2:-65217745 None:intergenic
CTACCTGCTGTGATAAACAT+CGG 0.655948 5.2:+65217520 MS.gene063581:CDS
GAAGGCGAAGATTCGAGACA+AGG 0.661663 5.2:+65218519 MS.gene063581:CDS
ATGAACTCTCCACCTTCAGG+GGG 0.669103 5.2:-65218480 None:intergenic
AGACAAGGAAAGAATCCCAG+TGG 0.724462 5.2:+65218534 MS.gene063581:CDS
AATGACCAAATGGAATCACG+AGG 0.726532 5.2:-65218073 None:intergenic
AGAGATAGGAGGTACCTTGG+GGG 0.765241 5.2:-65218135 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCCTCAAAAATATATAAA+GGG - chr5.2:65217217-65217236 None:intergenic 15.0%
!!! TTTATTAGTGATTAATTTGT+TGG + chr5.2:65218405-65218424 MS.gene063581:intron 15.0%
!!! TTTTCCTCAAAAATATATAA+AGG - chr5.2:65217218-65217237 None:intergenic 15.0%
!! GTAAAGTTAAAACCATTTAT+TGG - chr5.2:65217176-65217195 None:intergenic 20.0%
!! TAAGTAATAACTTCTTTCAA+AGG - chr5.2:65217405-65217424 None:intergenic 20.0%
!! TTCCTCAAAAATATATAAAG+GGG - chr5.2:65217216-65217235 None:intergenic 20.0%
!!! GTTATTTTTTTACTTGAGAA+TGG + chr5.2:65217080-65217099 MS.gene063581:intron 20.0%
!!! TTATTTTTTCTTTCACCTTT+TGG + chr5.2:65218196-65218215 MS.gene063581:intron 20.0%
!!! TTTTGTATTTGTATTCGTTT+TGG + chr5.2:65218285-65218304 MS.gene063581:intron 20.0%
! AAACAACCAAAGTAATGAAA+AGG - chr5.2:65218162-65218181 None:intergenic 25.0%
! AAACCATTTATTGGTAAAGT+AGG - chr5.2:65217167-65217186 None:intergenic 25.0%
! AATAATAGTATTGTGAGTCT+GGG + chr5.2:65217897-65217916 MS.gene063581:CDS 25.0%
! ATATTTGATACTGATATCTC+AGG - chr5.2:65218318-65218337 None:intergenic 25.0%
! CATACATACTGCATAAAATA+TGG - chr5.2:65217117-65217136 None:intergenic 25.0%
! GTCTTTGGCATTTAAAAAAA+CGG - chr5.2:65218254-65218273 None:intergenic 25.0%
! TCCTCAAAAATATATAAAGG+GGG - chr5.2:65217215-65217234 None:intergenic 25.0%
!! TAATATTTTCTGTTATCCTG+TGG + chr5.2:65217270-65217289 MS.gene063581:intron 25.0%
!!! GTTTTTTTAAATGCCAAAGA+CGG + chr5.2:65218253-65218272 MS.gene063581:intron 25.0%
!!! TTCTAGAGTATAAATCCAAA+AGG - chr5.2:65218214-65218233 None:intergenic 25.0%
AATATATCATACTGATACCG+CGG - chr5.2:65217966-65217985 None:intergenic 30.0%
AGATTGCAATAGATTCTCAA+TGG - chr5.2:65217595-65217614 None:intergenic 30.0%
AGTAATGAAAAGGAAGAGAT+AGG - chr5.2:65218152-65218171 None:intergenic 30.0%
ATACACAATAGCAAACTTGA+AGG + chr5.2:65218501-65218520 MS.gene063581:CDS 30.0%
CAATAATAGTATTGTGAGTC+TGG + chr5.2:65217896-65217915 MS.gene063581:CDS 30.0%
GACTCACAATACTATTATTG+AGG - chr5.2:65217896-65217915 None:intergenic 30.0%
TAACAATTTACATGCATACC+TGG - chr5.2:65217045-65217064 None:intergenic 30.0%
TTATGCAGTATGTATGTTTC+TGG + chr5.2:65217121-65217140 MS.gene063581:intron 30.0%
TTTCTCATTAACATCTTCTG+AGG - chr5.2:65216942-65216961 None:intergenic 30.0%
TTTGAGCTAGAAAATTAGAC+AGG - chr5.2:65217298-65217317 None:intergenic 30.0%
! TCTCTTCCTTTTCATTACTT+TGG + chr5.2:65218153-65218172 MS.gene063581:intron 30.0%
!! ACCCCCTTTATATATTTTTG+AGG + chr5.2:65217211-65217230 MS.gene063581:intron 30.0%
!!! GATTTTTGTTTTCTTTCTCG+TGG + chr5.2:65218381-65218400 MS.gene063581:intron 30.0%
AAAACACTAACAACCGTCTT+TGG - chr5.2:65218269-65218288 None:intergenic 35.0%
AACAAAGTCACAACCTGAAA+GGG - chr5.2:65217724-65217743 None:intergenic 35.0%
AATAGCATGTTATGCAGGTA+AGG - chr5.2:65217374-65217393 None:intergenic 35.0%
AATGAAAAGGAAGAGATAGG+AGG - chr5.2:65218149-65218168 None:intergenic 35.0%
AATTTCCTCGTGATTCCATT+TGG + chr5.2:65218068-65218087 MS.gene063581:CDS 35.0%
AATTTGCGAATCATGGAGTT+TGG + chr5.2:65217239-65217258 MS.gene063581:intron 35.0%
ACATTCCTCTTGAAGAACAA+TGG - chr5.2:65217856-65217875 None:intergenic 35.0%
ACTCAAGGGTTGAAAACAAA+TGG - chr5.2:65217011-65217030 None:intergenic 35.0%
ATCAGTATGATATATTGGCC+AGG + chr5.2:65217970-65217989 MS.gene063581:CDS 35.0%
CCATTTATTGGTAAAGTAGG+AGG - chr5.2:65217164-65217183 None:intergenic 35.0%
CCTCCTACTTTACCAATAAA+TGG + chr5.2:65217161-65217180 MS.gene063581:intron 35.0%
CTTCTCTTGGATGTTGTAAT+TGG - chr5.2:65218614-65218633 None:intergenic 35.0%
GAAGAACCAAAATGACCAAA+TGG - chr5.2:65218086-65218105 None:intergenic 35.0%
GCAATCAAATGCATTTGAGT+CGG - chr5.2:65216987-65217006 None:intergenic 35.0%
GCGGTATCAGTATGATATAT+TGG + chr5.2:65217965-65217984 MS.gene063581:CDS 35.0%
GGAAAACAATTTGCGAATCA+TGG + chr5.2:65217232-65217251 MS.gene063581:intron 35.0%
GTTGCAATTCAGTGTGTTAA+TGG + chr5.2:65217483-65217502 MS.gene063581:intron 35.0%
TTGGATGTTGTAATTGGCAA+GGG - chr5.2:65218608-65218627 None:intergenic 35.0%
! AACATCTTCTGAGGAATCAA+CGG - chr5.2:65216933-65216952 None:intergenic 35.0%
! GTGATTCCATTTGGTCATTT+TGG + chr5.2:65218077-65218096 MS.gene063581:CDS 35.0%
! TCTCGAAGCACATTTTCTTA+TGG + chr5.2:65217792-65217811 MS.gene063581:CDS 35.0%
! TTGCAGCCATGTTTTTCATT+CGG - chr5.2:65217633-65217652 None:intergenic 35.0%
!! CGAATACGTTTTGAGCATTT+GGG - chr5.2:65217555-65217574 None:intergenic 35.0%
AACCTTTACTGCAACACAAC+AGG - chr5.2:65218355-65218374 None:intergenic 40.0%
AATGACCAAATGGAATCACG+AGG - chr5.2:65218076-65218095 None:intergenic 40.0%
ACAAAGTCACAACCTGAAAG+GGG - chr5.2:65217723-65217742 None:intergenic 40.0%
ATCCTGTTGTGTTGCAGTAA+AGG + chr5.2:65218350-65218369 MS.gene063581:intron 40.0%
ATCTTCATAAAGACCCTGAC+TGG + chr5.2:65218448-65218467 MS.gene063581:CDS 40.0%
CAACAAAGTCACAACCTGAA+AGG - chr5.2:65217725-65217744 None:intergenic 40.0%
CTACCTGCTGTGATAAACAT+CGG + chr5.2:65217520-65217539 MS.gene063581:CDS 40.0%
CTAGCAATAGCATGTTATGC+AGG - chr5.2:65217379-65217398 None:intergenic 40.0%
CTTGGATGTTGTAATTGGCA+AGG - chr5.2:65218609-65218628 None:intergenic 40.0%
GAATGAAAAACATGGCTGCA+AGG + chr5.2:65217632-65217651 MS.gene063581:CDS 40.0%
GGCTTCGTCATTAGACTTTA+AGG - chr5.2:65217835-65217854 None:intergenic 40.0%
GTTATGCAGGTAAGGTAAGA+GGG - chr5.2:65217366-65217385 None:intergenic 40.0%
TATTGTGAGTCTGGGAAATG+CGG + chr5.2:65217905-65217924 MS.gene063581:CDS 40.0%
TCATGCCCGAATGAAAAACA+TGG + chr5.2:65217624-65217643 MS.gene063581:CDS 40.0%
TGTTATGCAGGTAAGGTAAG+AGG - chr5.2:65217367-65217386 None:intergenic 40.0%
TGTTGCAGTAAAGGTTGCAA+TGG + chr5.2:65218359-65218378 MS.gene063581:intron 40.0%
TTCGAGAATCCTTGTGTTTG+TGG - chr5.2:65217779-65217798 None:intergenic 40.0%
! AGACTTTAAGGAGACGATGA+AGG - chr5.2:65217823-65217842 None:intergenic 40.0%
! CAAACTGCATATTTGAGACC+TGG - chr5.2:65217991-65218010 None:intergenic 40.0%
! TGCAGCCATGTTTTTCATTC+GGG - chr5.2:65217632-65217651 None:intergenic 40.0%
!! AGGGGGTATGAAGTTTTCTT+TGG - chr5.2:65217198-65217217 None:intergenic 40.0%
!! GCGAATACGTTTTGAGCATT+TGG - chr5.2:65217556-65217575 None:intergenic 40.0%
AACGGTCTCTTCACAGTCTT+CGG - chr5.2:65216915-65216934 None:intergenic 45.0%
ACATGCATACCTGGAACACA+GGG - chr5.2:65217036-65217055 None:intergenic 45.0%
AGAAATTTGCGTAACCCCCA+AGG + chr5.2:65218121-65218140 MS.gene063581:CDS 45.0%
AGACAAGGAAAGAATCCCAG+TGG + chr5.2:65218534-65218553 MS.gene063581:CDS 45.0%
CCATTTCAGCCACAAACACA+AGG + chr5.2:65217767-65217786 MS.gene063581:CDS 45.0%
CCTTGTGTTTGTGGCTGAAA+TGG - chr5.2:65217770-65217789 None:intergenic 45.0%
CGAAGCCATTGTTCTTCAAG+AGG + chr5.2:65217848-65217867 MS.gene063581:CDS 45.0%
CTCAACCTCATTCTCCGTTT+CGG + chr5.2:65218640-65218659 MS.gene063581:CDS 45.0%
GAAAATTAGACAGGCACCAC+AGG - chr5.2:65217289-65217308 None:intergenic 45.0%
GAAACGGAGAATGAGGTTGA+GGG - chr5.2:65218641-65218660 None:intergenic 45.0%
GTAACGCGTTGGACATTCTT+CGG - chr5.2:65218029-65218048 None:intergenic 45.0%
GTATGAACTCTCCACCTTCA+GGG - chr5.2:65218485-65218504 None:intergenic 45.0%
GTGTTTGTGGCTGAAATGGT+TGG - chr5.2:65217766-65217785 None:intergenic 45.0%
GTTCCGATGTTTATCACAGC+AGG - chr5.2:65217526-65217545 None:intergenic 45.0%
GTTGGACAACACTTCTGATG+AGG - chr5.2:65217748-65217767 None:intergenic 45.0%
TACATGCATACCTGGAACAC+AGG - chr5.2:65217037-65217056 None:intergenic 45.0%
TATGAACTCTCCACCTTCAG+GGG - chr5.2:65218484-65218503 None:intergenic 45.0%
TGGAACACAGGGATACTCAA+GGG - chr5.2:65217025-65217044 None:intergenic 45.0%
TGGGGGTTACGCAAATTTCT+AGG - chr5.2:65218121-65218140 None:intergenic 45.0%
TGTATGAACTCTCCACCTTC+AGG - chr5.2:65218486-65218505 None:intergenic 45.0%
TGTTGTAATTGGCAAGGGTC+TGG - chr5.2:65218603-65218622 None:intergenic 45.0%
! ATGTCTGGTCTTTGCCAGTA+AGG + chr5.2:65218564-65218583 MS.gene063581:CDS 45.0%
! GTAAGGATCTGGAACCGAAA+CGG - chr5.2:65218657-65218676 None:intergenic 45.0%
!! AAGAGATAGGAGGTACCTTG+GGG - chr5.2:65218139-65218158 None:intergenic 45.0%
!! GAAGAGATAGGAGGTACCTT+GGG - chr5.2:65218140-65218159 None:intergenic 45.0%
ACCAGACATTGCTGATCCAC+TGG - chr5.2:65218553-65218572 None:intergenic 50.0%
ATGAACTCTCCACCTTCAGG+GGG - chr5.2:65218483-65218502 None:intergenic 50.0%
CCAGACATTGCTGATCCACT+GGG - chr5.2:65218552-65218571 None:intergenic 50.0%
CCATGTTACTGTCCCCTTTC+AGG + chr5.2:65217708-65217727 MS.gene063581:CDS 50.0%
CCTGAAAGGGGACAGTAACA+TGG - chr5.2:65217711-65217730 None:intergenic 50.0%
CGAAACGGAGAATGAGGTTG+AGG - chr5.2:65218642-65218661 None:intergenic 50.0%
CTGGAACACAGGGATACTCA+AGG - chr5.2:65217026-65217045 None:intergenic 50.0%
CTTGAGTATCCCTGTGTTCC+AGG + chr5.2:65217024-65217043 MS.gene063581:CDS 50.0%
GAAGGCGAAGATTCGAGACA+AGG + chr5.2:65218519-65218538 MS.gene063581:CDS 50.0%
GAGCTGCTAAAGTAACGCGT+TGG - chr5.2:65218040-65218059 None:intergenic 50.0%
GCAGTCAGCTAGTTCCTTAC+TGG - chr5.2:65218581-65218600 None:intergenic 50.0%
GCGGTCAGTATTAGCTGCAT+TGG + chr5.2:65217924-65217943 MS.gene063581:CDS 50.0%
GTCCTAACTATTCTGAGCCG+CGG + chr5.2:65217946-65217965 MS.gene063581:CDS 50.0%
TACCGCGGCTCAGAATAGTT+AGG - chr5.2:65217951-65217970 None:intergenic 50.0%
TGGAACCGAAACGGAGAATG+AGG - chr5.2:65218648-65218667 None:intergenic 50.0%
! GGTTGAGGGTTGACTTCTCT+TGG - chr5.2:65218627-65218646 None:intergenic 50.0%
!! AGAGATAGGAGGTACCTTGG+GGG - chr5.2:65218138-65218157 None:intergenic 50.0%
!! GGAAGAGATAGGAGGTACCT+TGG - chr5.2:65218141-65218160 None:intergenic 50.0%
AAAGACCATCCCCCTGAAGG+TGG + chr5.2:65218471-65218490 MS.gene063581:CDS 55.0%
CCCAGTGGATCAGCAATGTC+TGG + chr5.2:65218549-65218568 MS.gene063581:CDS 55.0%
GGGGATGGTCTTTCCAGTCA+GGG - chr5.2:65218464-65218483 None:intergenic 55.0%
TGGAAAGACCATCCCCCTGA+AGG + chr5.2:65218468-65218487 MS.gene063581:CDS 55.0%
ACTCTCCACCTTCAGGGGGA+TGG - chr5.2:65218479-65218498 None:intergenic 60.0%
GGGGGATGGTCTTTCCAGTC+AGG - chr5.2:65218465-65218484 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 65216899 65218681 65216899 ID=MS.gene063581
chr5.2 mRNA 65216899 65218681 65216899 ID=MS.gene063581.t1;Parent=MS.gene063581
chr5.2 exon 65216899 65217045 65216899 ID=MS.gene063581.t1.exon1;Parent=MS.gene063581.t1
chr5.2 CDS 65216899 65217045 65216899 ID=cds.MS.gene063581.t1;Parent=MS.gene063581.t1
chr5.2 exon 65217495 65218142 65217495 ID=MS.gene063581.t1.exon2;Parent=MS.gene063581.t1
chr5.2 CDS 65217495 65218142 65217495 ID=cds.MS.gene063581.t1;Parent=MS.gene063581.t1
chr5.2 exon 65218442 65218681 65218442 ID=MS.gene063581.t1.exon3;Parent=MS.gene063581.t1
chr5.2 CDS 65218442 65218681 65218442 ID=cds.MS.gene063581.t1;Parent=MS.gene063581.t1
Gene Sequence

>MS.gene063581

ATGGAGGCGGGTACCGAAGACTGTGAAGAGACCGTTGATTCCTCAGAAGATGTTAATGAGAAAAATTCAGTTTCTGTGATGATTTCCGACTCAAATGCATTTGATTGCTCCATTTGTTTTCAACCCTTGAGTATCCCTGTGTTCCAGGTATGCATGTAAATTGTTAATTTTTTTAATAACAGTTATTTTTTTACTTGAGAATGGTTAATTTGTTGCCATATTTTATGCAGTATGTATGTTTCTGGTGATTAAATGTGATATTCCTCCTACTTTACCAATAAATGGTTTTAACTTTACCAAAGAAAACTTCATACCCCCTTTATATATTTTTGAGGAAAACAATTTGCGAATCATGGAGTTTGGAGAATGATTAATATTTTCTGTTATCCTGTGGTGCCTGTCTAATTTTCTAGCTCAAAGAAATCGAGTTCAAATCTCTATTAATAAAGCATGAACTGATGCATCCCTCTTACCTTACCTGCATAACATGCTATTGCTAGAAGCCTTTGAAAGAAGTTATTACTTATTTTAGTTGATTTTATTCTAGATAATGATTAAGAAGCTAATTTGATGAGTTCTTGTATGTTGCAATTCAGTGTGTTAATGGTCATACTGTTTGCTCTACCTGCTGTGATAAACATCGGAACAAGTGTCCCAAATGCTCAAAACGTATTCGCTTAAAACGTTGTAAAGCCATTGAGAATCTATTGCAATCTTTCGAAATGTCATGCCCGAATGAAAAACATGGCTGCAAGGAGACAATGCGTTACAATGAGAAGAAGAAGCATGAAGAAGAATGTATGTATATGCCATGTTACTGTCCCCTTTCAGGTTGTGACTTTGTTGCCTCATCAGAAGTGTTGTCCAACCATTTCAGCCACAAACACAAGGATTCTCGAAGCACATTTTCTTATGGTCACTCCTTCATCGTCTCCTTAAAGTCTAATGACGAAGCCATTGTTCTTCAAGAGGAATGTGTCAGCAAGCTGTTTATCCTCAATAATAGTATTGTGAGTCTGGGAAATGCGGTCAGTATTAGCTGCATTGGTCCTAACTATTCTGAGCCGCGGTATCAGTATGATATATTGGCCAGGTCTCAAATATGCAGTTTGAAGTTACAGTCTTTTCCGAAGAATGTCCAACGCGTTACTTTAGCAGCTCTTTCTTCAAATTTCCTCGTGATTCCATTTGGTCATTTTGGTTCTTCTGAACTTCTCGACCTAGAAATTTGCGTAACCCCCAAGGTACCTCCTATCTCTTCCTTTTCATTACTTTGGTTGTTTTTCAAATTATACTATTATTTTTTCTTTCACCTTTTGGATTTATACTCTAGAATTTTATCTCAAATTCATCCGTTTTTTTAAATGCCAAAGACGGTTGTTAGTGTTTTGTATTTGTATTCGTTTTGGACTAGTTCCTGAGATATCAGTATCAAATATTTAATTTCTTTCATCCTGTTGTGTTGCAGTAAAGGTTGCAATGGATTTTTGTTTTCTTTCTCGTGGTTTTATTAGTGATTAATTTGTTGGCAATCGTGTCACAGATGCAAATCTTCATAAAGACCCTGACTGGAAAGACCATCCCCCTGAAGGTGGAGAGTTCATACACAATAGCAAACTTGAAGGCGAAGATTCGAGACAAGGAAAGAATCCCAGTGGATCAGCAATGTCTGGTCTTTGCCAGTAAGGAACTAGCTGACTGCCAGACCCTTGCCAATTACAACATCCAAGAGAAGTCAACCCTCAACCTCATTCTCCGTTTCGGTTCCAGATCCTTACCATAA

Protein sequence

>MS.gene063581.t1

MEAGTEDCEETVDSSEDVNEKNSVSVMISDSNAFDCSICFQPLSIPVFQCVNGHTVCSTCCDKHRNKCPKCSKRIRLKRCKAIENLLQSFEMSCPNEKHGCKETMRYNEKKKHEEECMYMPCYCPLSGCDFVASSEVLSNHFSHKHKDSRSTFSYGHSFIVSLKSNDEAIVLQEECVSKLFILNNSIVSLGNAVSISCIGPNYSEPRYQYDILARSQICSLKLQSFPKNVQRVTLAALSSNFLVIPFGHFGSSELLDLEICVTPKMQIFIKTLTGKTIPLKVESSYTIANLKAKIRDKERIPVDQQCLVFASKELADCQTLANYNIQEKSTLNLILRFGSRSLP