Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009562.t1 | RHN56826.1 | 70.7 | 222 | 64 | 1 | 2 | 222 | 125 | 346 | 2.00E-81 | 312.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009562.t1 | P0CG70 | 48.1 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 8.2e-12 | 72.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009562.t1 | G7KFS7 | 70.7 | 222 | 64 | 1 | 2 | 222 | 162 | 383 | 1.4e-81 | 312.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009562.t1 | MTR_5g076720 | 70.175 | 228 | 66 | 2 | 2 | 227 | 162 | 389 | 1.76e-104 | 308 |
MS.gene009562.t1 | MTR_5g076810 | 65.766 | 222 | 73 | 2 | 2 | 222 | 44 | 263 | 1.70e-94 | 279 |
MS.gene009562.t1 | MTR_1g046640 | 63.801 | 221 | 78 | 1 | 2 | 222 | 90 | 308 | 2.10e-90 | 270 |
MS.gene009562.t1 | MTR_5g067400 | 63.801 | 221 | 78 | 1 | 2 | 222 | 91 | 309 | 2.43e-89 | 267 |
MS.gene009562.t1 | MTR_1g046650 | 63.470 | 219 | 78 | 1 | 2 | 220 | 21 | 237 | 3.47e-89 | 264 |
MS.gene009562.t1 | MTR_2g038420 | 62.174 | 230 | 83 | 3 | 2 | 227 | 105 | 334 | 4.16e-88 | 265 |
MS.gene009562.t1 | MTR_1g046650 | 63.470 | 219 | 78 | 1 | 2 | 220 | 90 | 306 | 5.25e-88 | 264 |
MS.gene009562.t1 | MTR_1g046650 | 63.470 | 219 | 78 | 1 | 2 | 220 | 90 | 306 | 2.00e-87 | 262 |
MS.gene009562.t1 | MTR_1g046650 | 63.470 | 219 | 78 | 1 | 2 | 220 | 121 | 337 | 3.30e-87 | 263 |
MS.gene009562.t1 | MTR_7g024290 | 61.947 | 226 | 83 | 2 | 2 | 226 | 91 | 314 | 1.87e-85 | 257 |
MS.gene009562.t1 | MTR_5g076505 | 58.559 | 222 | 91 | 1 | 2 | 222 | 87 | 308 | 8.73e-84 | 253 |
MS.gene009562.t1 | MTR_2g038430 | 58.824 | 238 | 86 | 3 | 2 | 227 | 105 | 342 | 9.68e-83 | 251 |
MS.gene009562.t1 | MTR_5g061290 | 57.589 | 224 | 92 | 1 | 2 | 222 | 97 | 320 | 1.14e-82 | 251 |
MS.gene009562.t1 | MTR_5g076520 | 60.090 | 223 | 87 | 2 | 2 | 222 | 91 | 313 | 6.70e-81 | 246 |
MS.gene009562.t1 | MTR_7g094390 | 59.361 | 219 | 87 | 1 | 2 | 220 | 252 | 468 | 1.06e-79 | 248 |
MS.gene009562.t1 | MTR_5g076660 | 57.143 | 231 | 94 | 2 | 2 | 229 | 113 | 341 | 1.31e-76 | 236 |
MS.gene009562.t1 | MTR_5g076370 | 54.018 | 224 | 98 | 2 | 2 | 222 | 114 | 335 | 4.70e-70 | 219 |
MS.gene009562.t1 | MTR_5g076820 | 61.749 | 183 | 66 | 3 | 2 | 181 | 98 | 279 | 4.33e-67 | 209 |
MS.gene009562.t1 | MTR_5g076540 | 68.841 | 138 | 43 | 0 | 2 | 139 | 91 | 228 | 5.51e-61 | 192 |
MS.gene009562.t1 | MTR_5g077020 | 67.785 | 149 | 42 | 3 | 2 | 148 | 62 | 206 | 1.48e-57 | 183 |
MS.gene009562.t1 | MTR_4g058025 | 70.476 | 105 | 30 | 1 | 2 | 105 | 24 | 128 | 1.87e-43 | 145 |
MS.gene009562.t1 | MTR_4g094468 | 40.816 | 147 | 84 | 2 | 2 | 146 | 177 | 322 | 1.52e-25 | 102 |
MS.gene009562.t1 | MTR_4g088485 | 48.101 | 79 | 41 | 0 | 144 | 222 | 128 | 206 | 2.13e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g088485 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.86e-14 | 70.5 |
MS.gene009562.t1 | MTR_1g066390 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.46e-15 | 73.6 |
MS.gene009562.t1 | MTR_1g066390 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.46e-15 | 73.6 |
MS.gene009562.t1 | MTR_1g066390 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.92e-14 | 70.9 |
MS.gene009562.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.55e-15 | 73.2 |
MS.gene009562.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.55e-15 | 73.2 |
MS.gene009562.t1 | MTR_7g116360 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.96e-14 | 70.9 |
MS.gene009562.t1 | MTR_5g092700 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.30e-15 | 70.9 |
MS.gene009562.t1 | MTR_4g073580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.30e-15 | 70.9 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.49e-15 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 5.49e-15 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 3.96e-14 | 70.5 |
MS.gene009562.t1 | MTR_4g080920 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.54e-15 | 72.4 |
MS.gene009562.t1 | MTR_4g080920 | 52.174 | 69 | 33 | 0 | 154 | 222 | 1 | 69 | 1.81e-13 | 68.2 |
MS.gene009562.t1 | MTR_6g061930 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.77e-15 | 73.2 |
MS.gene009562.t1 | MTR_6g061930 | 48.101 | 79 | 41 | 0 | 144 | 222 | 204 | 282 | 5.77e-15 | 73.2 |
MS.gene009562.t1 | MTR_6g061930 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.75e-14 | 70.5 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.64e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.64e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.64e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.67e-14 | 70.9 |
MS.gene009562.t1 | MTR_7g105080 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.30e-15 | 69.7 |
MS.gene009562.t1 | MTR_3g092130 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.30e-15 | 69.7 |
MS.gene009562.t1 | MTR_1g059690 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.30e-15 | 69.7 |
MS.gene009562.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 115 | 193 | 8.57e-15 | 72.4 |
MS.gene009562.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 191 | 269 | 8.57e-15 | 72.4 |
MS.gene009562.t1 | MTR_7g116360 | 44.330 | 97 | 52 | 1 | 126 | 222 | 23 | 117 | 2.61e-14 | 71.2 |
MS.gene009562.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.44e-15 | 73.6 |
MS.gene009562.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.44e-15 | 73.6 |
MS.gene009562.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.44e-15 | 73.6 |
MS.gene009562.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.44e-15 | 73.6 |
MS.gene009562.t1 | MTR_8g081020 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.34e-14 | 70.9 |
MS.gene009562.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.53e-15 | 73.6 |
MS.gene009562.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.53e-15 | 73.6 |
MS.gene009562.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.53e-15 | 73.6 |
MS.gene009562.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.27e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g091580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.46e-14 | 70.9 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.81e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.81e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.81e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.81e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.65e-14 | 70.9 |
MS.gene009562.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.90e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.90e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.90e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.90e-15 | 73.2 |
MS.gene009562.t1 | MTR_4g080797 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.65e-14 | 70.9 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.90e-15 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.90e-15 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.90e-15 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.90e-15 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.65e-14 | 70.9 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.09e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.09e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.47e-14 | 70.1 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.21e-14 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.21e-14 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.21e-14 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.21e-14 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.21e-14 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.84e-14 | 70.9 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.21e-14 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.21e-14 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.21e-14 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.21e-14 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.21e-14 | 73.2 |
MS.gene009562.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.84e-14 | 70.9 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.28e-14 | 73.6 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.28e-14 | 73.6 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.28e-14 | 73.6 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.28e-14 | 73.6 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.28e-14 | 73.6 |
MS.gene009562.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 1.28e-14 | 73.6 |
MS.gene009562.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.33e-14 | 70.9 |
MS.gene009562.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 5.62e-14 | 71.6 |
MS.gene009562.t1 | MTR_4g091580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.81e-14 | 70.9 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 1.33e-14 | 73.2 |
MS.gene009562.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.65e-14 | 70.9 |
MS.gene009562.t1 | MTR_4g073580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.40e-14 | 70.5 |
MS.gene009562.t1 | MTR_3g092130 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.70e-14 | 68.9 |
MS.gene009562.t1 | MTR_8g088060 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.89e-14 | 69.3 |
MS.gene009562.t1 | MTR_5g033960 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 69.3 |
MS.gene009562.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 3.08e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 3.08e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 3.08e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 3.08e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 3.08e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 3.08e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 523 | 601 | 3.08e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 599 | 677 | 3.08e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 675 | 753 | 3.08e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 751 | 829 | 3.08e-14 | 72.4 |
MS.gene009562.t1 | MTR_4g088495 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 9.65e-14 | 70.9 |
MS.gene009562.t1 | MTR_5g061310 | 45.205 | 73 | 39 | 1 | 156 | 227 | 4 | 76 | 1.41e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009562.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.47e-16 | 73.2 |
MS.gene009562.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.43e-15 | 70.9 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.47e-16 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.43e-15 | 70.9 |
MS.gene009562.t1 | AT1G55060 | 45.977 | 87 | 47 | 0 | 136 | 222 | 59 | 145 | 1.43e-15 | 73.9 |
MS.gene009562.t1 | AT1G55060 | 45.570 | 79 | 43 | 0 | 144 | 222 | 143 | 221 | 3.94e-13 | 67.4 |
MS.gene009562.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.67e-15 | 73.2 |
MS.gene009562.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.67e-15 | 73.2 |
MS.gene009562.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.05e-14 | 70.9 |
MS.gene009562.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.67e-15 | 73.2 |
MS.gene009562.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.67e-15 | 73.2 |
MS.gene009562.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.05e-14 | 70.9 |
MS.gene009562.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.67e-15 | 73.2 |
MS.gene009562.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.67e-15 | 73.2 |
MS.gene009562.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.05e-14 | 70.9 |
MS.gene009562.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.67e-15 | 73.2 |
MS.gene009562.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.67e-15 | 73.2 |
MS.gene009562.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.05e-14 | 70.9 |
MS.gene009562.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.67e-15 | 73.2 |
MS.gene009562.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.67e-15 | 73.2 |
MS.gene009562.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.05e-14 | 70.9 |
MS.gene009562.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G03240 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.35e-14 | 70.9 |
MS.gene009562.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G03240 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.35e-14 | 70.9 |
MS.gene009562.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G03240 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.35e-14 | 70.9 |
MS.gene009562.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.18e-15 | 73.6 |
MS.gene009562.t1 | AT5G20620 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.35e-14 | 70.9 |
MS.gene009562.t1 | AT2G35635 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.55e-15 | 70.5 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.71e-14 | 70.9 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.71e-14 | 70.9 |
MS.gene009562.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.71e-14 | 70.9 |
MS.gene009562.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.56e-15 | 73.2 |
MS.gene009562.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.71e-14 | 70.9 |
MS.gene009562.t1 | AT1G31340 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.97e-15 | 70.5 |
MS.gene009562.t1 | AT1G65350 | 48.101 | 79 | 41 | 0 | 144 | 222 | 142 | 220 | 9.04e-15 | 73.2 |
MS.gene009562.t1 | AT1G65350 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.40e-14 | 71.2 |
MS.gene009562.t1 | AT1G65350 | 46.835 | 79 | 41 | 1 | 144 | 222 | 67 | 144 | 2.77e-12 | 65.9 |
MS.gene009562.t1 | AT3G52590 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 9.49e-15 | 69.3 |
MS.gene009562.t1 | AT2G36170 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 9.49e-15 | 69.3 |
MS.gene009562.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.74e-15 | 73.6 |
MS.gene009562.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.74e-15 | 73.6 |
MS.gene009562.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.74e-15 | 73.6 |
MS.gene009562.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.74e-15 | 73.6 |
MS.gene009562.t1 | AT5G20620 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.54e-14 | 70.9 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.96e-14 | 70.9 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.96e-14 | 70.9 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.04e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.96e-14 | 70.9 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.26e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.26e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.26e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.26e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.26e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.21e-14 | 70.9 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.26e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.26e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.26e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.26e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.26e-14 | 73.2 |
MS.gene009562.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.21e-14 | 70.9 |
MS.gene009562.t1 | AT1G23410 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.52e-14 | 69.7 |
MS.gene009562.t1 | AT2G47110 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.96e-14 | 69.3 |
MS.gene009562.t1 | AT2G47110 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.96e-14 | 69.3 |
MS.gene009562.t1 | AT3G62250 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.36e-14 | 68.9 |
MS.gene009562.t1 | AT5G37640 | 46.835 | 79 | 42 | 0 | 144 | 222 | 69 | 147 | 2.88e-14 | 71.6 |
MS.gene009562.t1 | AT5G37640 | 44.304 | 79 | 44 | 0 | 144 | 222 | 145 | 223 | 5.93e-12 | 65.1 |
MS.gene009562.t1 | AT5G37640 | 46.250 | 80 | 42 | 1 | 144 | 222 | 221 | 300 | 1.58e-11 | 63.5 |
MS.gene009562.t1 | AT3G09790 | 46.835 | 79 | 42 | 0 | 144 | 222 | 69 | 147 | 4.98e-13 | 68.9 |
MS.gene009562.t1 | AT3G09790 | 50.000 | 70 | 35 | 0 | 153 | 222 | 2 | 71 | 1.04e-11 | 65.1 |
MS.gene009562.t1 | AT3G09790 | 43.478 | 92 | 42 | 3 | 144 | 225 | 459 | 550 | 6.11e-11 | 62.8 |
MS.gene009562.t1 | AT3G09790 | 46.835 | 79 | 42 | 0 | 144 | 222 | 69 | 147 | 4.98e-13 | 68.9 |
MS.gene009562.t1 | AT3G09790 | 50.000 | 70 | 35 | 0 | 153 | 222 | 2 | 71 | 1.04e-11 | 65.1 |
MS.gene009562.t1 | AT3G09790 | 43.478 | 92 | 42 | 3 | 144 | 225 | 459 | 550 | 6.11e-11 | 62.8 |
MS.gene009562.t1 | AT5G37930 | 29.801 | 151 | 102 | 2 | 2 | 148 | 190 | 340 | 5.39e-13 | 68.2 |
MS.gene009562.t1 | AT1G53930 | 46.479 | 71 | 38 | 0 | 156 | 226 | 88 | 158 | 2.33e-12 | 63.5 |
Find 51 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTCTGATTTCTTAACTCTA+AGG | 0.248144 | 5.3:-62108032 | None:intergenic |
GTTCTTCAAGAGGAAAATTA+TGG | 0.263266 | 5.3:+62107490 | MS.gene009562:CDS |
CTAGGCCCTTTACAAAGATT+TGG | 0.273442 | 5.3:-62107993 | None:intergenic |
GCAGTCAATATTTGCTGCTT+TGG | 0.307306 | 5.3:+62107556 | MS.gene009562:CDS |
GTCTCACTCCAGCGTTCTCT+TGG | 0.353127 | 5.3:+62108189 | MS.gene009562:CDS |
ATCTTTGTAAAGGGCCTAGA+TGG | 0.353834 | 5.3:+62107997 | MS.gene009562:CDS |
TACTCGGACTCGGGTGTGTC+TGG | 0.357737 | 5.3:-62107580 | None:intergenic |
CATCTCGTCAACGGCGGAAA+AGG | 0.365718 | 5.3:-62108276 | None:intergenic |
AGAAACTCTGATGAAAGATT+TGG | 0.377110 | 5.3:-62107685 | None:intergenic |
ACTAATCGCCAATCGTCTTT+CGG | 0.396763 | 5.3:-62108222 | None:intergenic |
AACAAAGTCACAACCTGAAA+AGG | 0.402082 | 5.3:-62107353 | None:intergenic |
TATAAATGTTGTAGTCGAAA+AGG | 0.405882 | 5.3:-62108155 | None:intergenic |
GGTTTCATCATTAGACTTCA+AGG | 0.410456 | 5.3:-62107464 | None:intergenic |
AAAGGGTCAGGTTTCCATAT+AGG | 0.437972 | 5.3:-62108137 | None:intergenic |
ATCAGACGTTGAGCGGCCAC+TGG | 0.450646 | 5.3:-62108099 | None:intergenic |
GGGTCATACACTTTCCATCT+AGG | 0.451359 | 5.3:-62108011 | None:intergenic |
GTCTGATTTCTTAACTCTAA+GGG | 0.469256 | 5.3:-62108031 | None:intergenic |
TATTGCAAAGAATTTCCAAC+AGG | 0.477260 | 5.3:+62107654 | MS.gene009562:CDS |
TGTTGTAGTCGAAAAGGGTC+AGG | 0.478699 | 5.3:-62108149 | None:intergenic |
TCTCACTCCAGCGTTCTCTT+GGG | 0.485099 | 5.3:+62108190 | MS.gene009562:CDS |
CAGATCCAAATCTTTGTAAA+GGG | 0.487025 | 5.3:+62107988 | MS.gene009562:intron |
AGAGGTTCAGAAGAATCAAA+TGG | 0.487848 | 5.3:-62107715 | None:intergenic |
CAATATATCATAACTATACT+CGG | 0.493864 | 5.3:-62107596 | None:intergenic |
ATAAATGTTGTAGTCGAAAA+GGG | 0.494936 | 5.3:-62108154 | None:intergenic |
GCAGATCCAAATCTTTGTAA+AGG | 0.495328 | 5.3:+62107987 | MS.gene009562:intron |
TGAAACCATTGTTCTTCAAG+AGG | 0.538905 | 5.3:+62107480 | MS.gene009562:CDS |
ACAAAGTCACAACCTGAAAA+GGG | 0.540410 | 5.3:-62107352 | None:intergenic |
AGACTTCAAGGAGACAATGA+AGG | 0.541721 | 5.3:-62107452 | None:intergenic |
ATGCAAATTTCTAGCTTGAG+AGG | 0.547282 | 5.3:-62107733 | None:intergenic |
AGGGACAGTAACATGGCTTA+CGG | 0.547857 | 5.3:-62107333 | None:intergenic |
GGTGGACAATTGTCAAATGT+TGG | 0.563243 | 5.3:-62108249 | None:intergenic |
ATCATAACTATACTCGGACT+CGG | 0.565356 | 5.3:-62107590 | None:intergenic |
GATTTGGTAAAGTAACCTGT+TGG | 0.572413 | 5.3:-62107669 | None:intergenic |
GTCAACGGCGGAAAAGGATG+AGG | 0.572483 | 5.3:-62108270 | None:intergenic |
TGCATTTCAGCGATAAACAC+GGG | 0.578429 | 5.3:+62107398 | MS.gene009562:CDS |
TCATAACTATACTCGGACTC+GGG | 0.578996 | 5.3:-62107589 | None:intergenic |
CTAGACGGCCGAAAGACGAT+TGG | 0.584297 | 5.3:+62108214 | MS.gene009562:CDS |
CCTGAAAAGGGACAGTAACA+TGG | 0.591203 | 5.3:-62107340 | None:intergenic |
TCAGACGTTGAGCGGCCACT+GGG | 0.601307 | 5.3:-62108098 | None:intergenic |
AACGGCGGAAAAGGATGAGG+TGG | 0.604435 | 5.3:-62108267 | None:intergenic |
GTGCATTTCAGCGATAAACA+CGG | 0.612101 | 5.3:+62107397 | MS.gene009562:CDS |
AGCGTTCTCTTGGGACTAGA+CGG | 0.615006 | 5.3:+62108199 | MS.gene009562:CDS |
TGAGGTGGTCATCTCGTCAA+CGG | 0.620115 | 5.3:-62108285 | None:intergenic |
GTCTAGTCCCAAGAGAACGC+TGG | 0.620661 | 5.3:-62108197 | None:intergenic |
TTGCATTCACGTAACCTCCA+CGG | 0.623413 | 5.3:+62107750 | MS.gene009562:CDS |
GCAAAAGATCAGACGTTGAG+CGG | 0.628431 | 5.3:-62108106 | None:intergenic |
AAGAGAACGCTGGAGTGAGA+CGG | 0.637960 | 5.3:-62108187 | None:intergenic |
GCATTTCAGCGATAAACACG+GGG | 0.695447 | 5.3:+62107399 | MS.gene009562:CDS |
GGTGGTCATCTCGTCAACGG+CGG | 0.713045 | 5.3:-62108282 | None:intergenic |
GGATATAGGAAATACCGTGG+AGG | 0.730393 | 5.3:-62107764 | None:intergenic |
TGACAAGACTGAGATCCCAG+TGG | 0.762074 | 5.3:+62108083 | MS.gene009562:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAATATTATTACTCTTTT+AGG | + | chr5.3:62107529-62107548 | MS.gene009562:CDS | 10.0% |
!!! | ATTTTCTTTTATTGATTTAA+TGG | + | chr5.3:62107954-62107973 | MS.gene009562:intron | 10.0% |
!! | CAATATATCATAACTATACT+CGG | - | chr5.3:62107599-62107618 | None:intergenic | 20.0% |
!!! | CTCAAATCAAATTTTCTTAT+GGG | + | chr5.3:62107425-62107444 | MS.gene009562:CDS | 20.0% |
!!! | TATTGATTTAATGGAAATTG+TGG | + | chr5.3:62107963-62107982 | MS.gene009562:intron | 20.0% |
!!! | TCTCAAATCAAATTTTCTTA+TGG | + | chr5.3:62107424-62107443 | MS.gene009562:CDS | 20.0% |
! | ATAAATGTTGTAGTCGAAAA+GGG | - | chr5.3:62108157-62108176 | None:intergenic | 25.0% |
! | GCAAATTATCTCAAATTCAT+CGG | + | chr5.3:62107857-62107876 | MS.gene009562:intron | 25.0% |
! | TAAAATACCAAGATTTCACT+AGG | - | chr5.3:62107812-62107831 | None:intergenic | 25.0% |
! | TATAAATGTTGTAGTCGAAA+AGG | - | chr5.3:62108158-62108177 | None:intergenic | 25.0% |
AAATAGCCAAAGCAAAGAAT+AGG | - | chr5.3:62107788-62107807 | None:intergenic | 30.0% | |
AGAAACTCTGATGAAAGATT+TGG | - | chr5.3:62107688-62107707 | None:intergenic | 30.0% | |
CAAAGCAAAGAATAGGATAT+AGG | - | chr5.3:62107781-62107800 | None:intergenic | 30.0% | |
CAGATCCAAATCTTTGTAAA+GGG | + | chr5.3:62107988-62108007 | MS.gene009562:intron | 30.0% | |
CTATATCCTATTCTTTGCTT+TGG | + | chr5.3:62107779-62107798 | MS.gene009562:intron | 30.0% | |
GTCTGATTTCTTAACTCTAA+GGG | - | chr5.3:62108034-62108053 | None:intergenic | 30.0% | |
GTTCTTCAAGAGGAAAATTA+TGG | + | chr5.3:62107490-62107509 | MS.gene009562:CDS | 30.0% | |
TATTGCAAAGAATTTCCAAC+AGG | + | chr5.3:62107654-62107673 | MS.gene009562:CDS | 30.0% | |
TGTCTGATTTCTTAACTCTA+AGG | - | chr5.3:62108035-62108054 | None:intergenic | 30.0% | |
! | ATTTTCCTCTTGAAGAACAA+TGG | - | chr5.3:62107488-62107507 | None:intergenic | 30.0% |
! | CTATTTTCCTAGTGAAATCT+TGG | + | chr5.3:62107802-62107821 | MS.gene009562:intron | 30.0% |
!! | GTTTTTCAAACGCCAAAAAA+CGG | + | chr5.3:62107879-62107898 | MS.gene009562:intron | 30.0% |
!!! | AAACACAAACAACCGTTTTT+TGG | - | chr5.3:62107894-62107913 | None:intergenic | 30.0% |
AACAAAGTCACAACCTGAAA+AGG | - | chr5.3:62107356-62107375 | None:intergenic | 35.0% | |
ACAAAGTCACAACCTGAAAA+GGG | - | chr5.3:62107355-62107374 | None:intergenic | 35.0% | |
AGAGGTTCAGAAGAATCAAA+TGG | - | chr5.3:62107718-62107737 | None:intergenic | 35.0% | |
ATAGGATATAGGAAATACCG+TGG | - | chr5.3:62107770-62107789 | None:intergenic | 35.0% | |
ATCATAACTATACTCGGACT+CGG | - | chr5.3:62107593-62107612 | None:intergenic | 35.0% | |
GCAGATCCAAATCTTTGTAA+AGG | + | chr5.3:62107987-62108006 | MS.gene009562:intron | 35.0% | |
GGTTTCATCATTAGACTTCA+AGG | - | chr5.3:62107467-62107486 | None:intergenic | 35.0% | |
TGAAACCATTGTTCTTCAAG+AGG | + | chr5.3:62107480-62107499 | MS.gene009562:CDS | 35.0% | |
! | GATTTGGTAAAGTAACCTGT+TGG | - | chr5.3:62107672-62107691 | None:intergenic | 35.0% |
! | TTTTGCGGTAGATACCTATA+TGG | + | chr5.3:62108123-62108142 | MS.gene009562:CDS | 35.0% |
!! | ATGCAAATTTCTAGCTTGAG+AGG | - | chr5.3:62107736-62107755 | None:intergenic | 35.0% |
AAAGGGTCAGGTTTCCATAT+AGG | - | chr5.3:62108140-62108159 | None:intergenic | 40.0% | |
ACTAATCGCCAATCGTCTTT+CGG | - | chr5.3:62108225-62108244 | None:intergenic | 40.0% | |
AGACTTCAAGGAGACAATGA+AGG | - | chr5.3:62107455-62107474 | None:intergenic | 40.0% | |
ATCTTTGTAAAGGGCCTAGA+TGG | + | chr5.3:62107997-62108016 | MS.gene009562:CDS | 40.0% | |
CTAGGCCCTTTACAAAGATT+TGG | - | chr5.3:62107996-62108015 | None:intergenic | 40.0% | |
GGTGGACAATTGTCAAATGT+TGG | - | chr5.3:62108252-62108271 | None:intergenic | 40.0% | |
GTGCATTTCAGCGATAAACA+CGG | + | chr5.3:62107397-62107416 | MS.gene009562:CDS | 40.0% | |
TCATAACTATACTCGGACTC+GGG | - | chr5.3:62107592-62107611 | None:intergenic | 40.0% | |
TGCATTTCAGCGATAAACAC+GGG | + | chr5.3:62107398-62107417 | MS.gene009562:CDS | 40.0% | |
! | GCAGTCAATATTTGCTGCTT+TGG | + | chr5.3:62107556-62107575 | MS.gene009562:CDS | 40.0% |
AGGGACAGTAACATGGCTTA+CGG | - | chr5.3:62107336-62107355 | None:intergenic | 45.0% | |
CCTGAAAAGGGACAGTAACA+TGG | - | chr5.3:62107343-62107362 | None:intergenic | 45.0% | |
GCAAAAGATCAGACGTTGAG+CGG | - | chr5.3:62108109-62108128 | None:intergenic | 45.0% | |
GCATTTCAGCGATAAACACG+GGG | + | chr5.3:62107399-62107418 | MS.gene009562:CDS | 45.0% | |
GGATATAGGAAATACCGTGG+AGG | - | chr5.3:62107767-62107786 | None:intergenic | 45.0% | |
GGGTCATACACTTTCCATCT+AGG | - | chr5.3:62108014-62108033 | None:intergenic | 45.0% | |
TGTTGTAGTCGAAAAGGGTC+AGG | - | chr5.3:62108152-62108171 | None:intergenic | 45.0% | |
TTGCATTCACGTAACCTCCA+CGG | + | chr5.3:62107750-62107769 | MS.gene009562:CDS | 45.0% | |
! | CCATGTTACTGTCCCTTTTC+AGG | + | chr5.3:62107340-62107359 | MS.gene009562:CDS | 45.0% |
! | GCTCAACGTCTGATCTTTTG+CGG | + | chr5.3:62108108-62108127 | MS.gene009562:CDS | 45.0% |
AAGAGAACGCTGGAGTGAGA+CGG | - | chr5.3:62108190-62108209 | None:intergenic | 50.0% | |
AGCGTTCTCTTGGGACTAGA+CGG | + | chr5.3:62108199-62108218 | MS.gene009562:CDS | 50.0% | |
TCTCACTCCAGCGTTCTCTT+GGG | + | chr5.3:62108190-62108209 | MS.gene009562:CDS | 50.0% | |
TGACAAGACTGAGATCCCAG+TGG | + | chr5.3:62108083-62108102 | MS.gene009562:CDS | 50.0% | |
AACGGCGGAAAAGGATGAGG+TGG | - | chr5.3:62108270-62108289 | None:intergenic | 55.0% | |
CATCTCGTCAACGGCGGAAA+AGG | - | chr5.3:62108279-62108298 | None:intergenic | 55.0% | |
CTAGACGGCCGAAAGACGAT+TGG | + | chr5.3:62108214-62108233 | MS.gene009562:CDS | 55.0% | |
GTCAACGGCGGAAAAGGATG+AGG | - | chr5.3:62108273-62108292 | None:intergenic | 55.0% | |
GTCTAGTCCCAAGAGAACGC+TGG | - | chr5.3:62108200-62108219 | None:intergenic | 55.0% | |
GTCTCACTCCAGCGTTCTCT+TGG | + | chr5.3:62108189-62108208 | MS.gene009562:CDS | 55.0% | |
ATCAGACGTTGAGCGGCCAC+TGG | - | chr5.3:62108102-62108121 | None:intergenic | 60.0% | |
TACTCGGACTCGGGTGTGTC+TGG | - | chr5.3:62107583-62107602 | None:intergenic | 60.0% | |
TCAGACGTTGAGCGGCCACT+GGG | - | chr5.3:62108101-62108120 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 62107313 | 62108299 | 62107313 | ID=MS.gene009562 |
chr5.3 | mRNA | 62107313 | 62108299 | 62107313 | ID=MS.gene009562.t1;Parent=MS.gene009562 |
chr5.3 | exon | 62107313 | 62107771 | 62107313 | ID=MS.gene009562.t1.exon1;Parent=MS.gene009562.t1 |
chr5.3 | CDS | 62107313 | 62107771 | 62107313 | ID=cds.MS.gene009562.t1;Parent=MS.gene009562.t1 |
chr5.3 | exon | 62107991 | 62108299 | 62107991 | ID=MS.gene009562.t1.exon2;Parent=MS.gene009562.t1 |
chr5.3 | CDS | 62107991 | 62108299 | 62107991 | ID=cds.MS.gene009562.t1;Parent=MS.gene009562.t1 |
Gene Sequence |
Protein sequence |