AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26186


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26186.t1 MTR_5g076720 83.761 351 56 1 123 472 40 390 0.0 601
MS.gene26186.t1 MTR_5g076720 81.967 61 11 0 1 61 141 201 5.40e-29 118
MS.gene26186.t1 MTR_1g046640 67.823 317 98 2 156 472 3 315 5.16e-153 437
MS.gene26186.t1 MTR_1g046640 62.069 58 21 1 4 61 73 129 2.29e-16 80.1
MS.gene26186.t1 MTR_5g067400 68.038 316 98 1 156 471 3 315 5.06e-151 432
MS.gene26186.t1 MTR_5g067400 63.934 61 22 0 1 61 70 130 3.02e-20 91.7
MS.gene26186.t1 MTR_7g024290 68.868 318 95 2 156 472 3 317 2.14e-150 431
MS.gene26186.t1 MTR_7g024290 65.574 61 21 0 1 61 70 130 8.38e-20 90.5
MS.gene26186.t1 MTR_7g094390 65.741 324 108 1 149 472 157 477 8.10e-147 428
MS.gene26186.t1 MTR_7g094390 68.852 61 19 0 1 61 231 291 5.21e-22 99.0
MS.gene26186.t1 MTR_1g046650 64.706 323 110 2 150 472 28 346 4.58e-144 416
MS.gene26186.t1 MTR_1g046650 60.656 61 23 1 1 61 101 160 5.80e-16 79.3
MS.gene26186.t1 MTR_1g046650 65.506 316 105 2 157 472 4 315 9.23e-144 414
MS.gene26186.t1 MTR_1g046650 60.656 61 23 1 1 61 70 129 4.27e-16 79.3
MS.gene26186.t1 MTR_2g038420 63.582 335 119 2 141 472 1 335 6.95e-142 410
MS.gene26186.t1 MTR_2g038420 65.574 61 21 0 1 61 84 144 1.92e-19 89.7
MS.gene26186.t1 MTR_2g038430 60.350 343 125 2 141 472 1 343 2.64e-141 409
MS.gene26186.t1 MTR_2g038430 65.000 60 21 0 1 60 84 143 1.14e-19 90.5
MS.gene26186.t1 MTR_5g076520 62.813 320 116 2 156 472 3 322 2.90e-137 398
MS.gene26186.t1 MTR_5g076520 67.213 61 20 0 1 61 70 130 2.52e-20 92.0
MS.gene26186.t1 MTR_5g061290 59.385 325 127 3 151 472 5 327 1.53e-131 384
MS.gene26186.t1 MTR_5g061290 63.934 61 22 0 1 61 76 136 1.28e-19 90.1
MS.gene26186.t1 MTR_5g076370 58.772 342 133 4 133 469 1 339 1.63e-130 381
MS.gene26186.t1 MTR_5g076370 62.295 61 23 0 1 61 93 153 4.36e-18 85.9
MS.gene26186.t1 MTR_1g046650 64.966 294 99 2 179 472 26 315 8.40e-130 379
MS.gene26186.t1 MTR_1g046650 60.656 61 23 1 1 61 70 129 3.26e-16 79.7
MS.gene26186.t1 MTR_5g076660 58.358 341 135 3 133 469 1 338 2.02e-127 374
MS.gene26186.t1 MTR_5g076660 61.017 59 23 0 1 59 92 150 1.01e-16 81.6
MS.gene26186.t1 MTR_5g076810 67.528 271 84 2 202 471 2 269 5.88e-124 362
MS.gene26186.t1 MTR_5g076810 63.934 61 22 0 1 61 23 83 5.39e-20 90.1
MS.gene26186.t1 MTR_5g076505 60.751 293 115 0 180 472 23 315 7.93e-123 361
MS.gene26186.t1 MTR_5g076505 59.016 61 25 0 1 61 66 126 2.26e-17 83.2
MS.gene26186.t1 MTR_5g076820 63.504 274 95 4 156 427 12 282 8.68e-111 329
MS.gene26186.t1 MTR_5g076820 55.738 61 27 0 1 61 77 137 8.12e-16 78.2
MS.gene26186.t1 MTR_1g046650 62.400 250 90 2 223 472 1 246 1.25e-102 306
MS.gene26186.t1 MTR_1g046650 60.656 61 23 1 1 61 1 60 7.76e-17 80.5
MS.gene26186.t1 MTR_5g076540 67.857 224 72 0 157 380 4 227 3.16e-102 305
MS.gene26186.t1 MTR_5g076540 59.016 61 25 0 1 61 70 130 6.37e-16 77.8
MS.gene26186.t1 MTR_5g077020 59.204 201 69 4 205 396 16 212 2.26e-68 218
MS.gene26186.t1 MTR_5g077020 56.897 58 20 2 5 61 45 98 1.68e-12 67.4
MS.gene26186.t1 MTR_4g094468 45.188 239 126 3 155 390 88 324 3.24e-62 206
MS.gene26186.t1 MTR_4g094468 45.455 66 36 0 1 66 156 221 3.04e-12 68.2
MS.gene26186.t1 MTR_4g058025 70.175 114 33 1 235 347 15 128 2.14e-47 162
MS.gene26186.t1 MTR_4g058025 64.000 50 17 1 13 61 15 64 1.34e-12 66.6
MS.gene26186.t1 MTR_5g092700 62.667 75 28 0 397 471 1 75 2.26e-21 90.9
MS.gene26186.t1 MTR_4g073580 62.667 75 28 0 397 471 1 75 2.26e-21 90.9
MS.gene26186.t1 MTR_4g073580 62.667 75 28 0 397 471 1 75 6.07e-21 90.5
MS.gene26186.t1 MTR_5g033960 62.667 75 28 0 397 471 1 75 6.90e-21 89.4
MS.gene26186.t1 MTR_8g088060 62.667 75 28 0 397 471 1 75 7.24e-21 89.4
MS.gene26186.t1 MTR_7g116360 62.667 75 28 0 397 471 1 75 1.20e-20 90.9
MS.gene26186.t1 MTR_7g116360 62.667 75 28 0 397 471 77 151 1.20e-20 90.9
MS.gene26186.t1 MTR_7g116360 62.667 75 28 0 397 471 153 227 1.20e-20 90.9
MS.gene26186.t1 MTR_4g088485 62.667 75 28 0 397 471 1 75 1.27e-20 90.5
MS.gene26186.t1 MTR_4g088485 62.667 75 28 0 397 471 138 212 1.27e-20 90.5
MS.gene26186.t1 MTR_4g088485 54.667 75 19 1 397 471 77 136 2.83e-15 75.1
MS.gene26186.t1 MTR_1g066390 62.667 75 28 0 397 471 1 75 1.33e-20 90.9
MS.gene26186.t1 MTR_1g066390 62.667 75 28 0 397 471 77 151 1.33e-20 90.9
MS.gene26186.t1 MTR_1g066390 62.667 75 28 0 397 471 153 227 1.33e-20 90.9
MS.gene26186.t1 MTR_7g105080 62.667 75 28 0 397 471 1 75 2.22e-20 87.4
MS.gene26186.t1 MTR_3g092130 62.667 75 28 0 397 471 1 75 2.22e-20 87.4
MS.gene26186.t1 MTR_1g059690 62.667 75 28 0 397 471 1 75 2.22e-20 87.4
MS.gene26186.t1 MTR_7g116360 61.842 76 29 0 396 471 48 123 2.24e-20 91.3
MS.gene26186.t1 MTR_7g116360 62.667 75 28 0 397 471 125 199 3.76e-20 90.5
MS.gene26186.t1 MTR_7g116360 62.667 75 28 0 397 471 201 275 3.76e-20 90.5
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 1 75 3.15e-20 90.9
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 77 151 3.15e-20 90.9
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 153 227 3.15e-20 90.9
MS.gene26186.t1 MTR_3g092130 62.667 75 28 0 397 471 1 75 3.98e-20 87.0
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 1 75 4.31e-20 90.9
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 77 151 4.31e-20 90.9
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 153 227 4.31e-20 90.9
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 229 303 4.31e-20 90.9
MS.gene26186.t1 MTR_6g061930 62.667 75 28 0 397 471 1 75 4.97e-20 90.5
MS.gene26186.t1 MTR_6g061930 62.667 75 28 0 397 471 77 151 4.97e-20 90.5
MS.gene26186.t1 MTR_6g061930 62.667 75 28 0 397 471 214 288 4.97e-20 90.5
MS.gene26186.t1 MTR_6g061930 54.667 75 19 1 397 471 153 212 1.21e-15 77.8
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 1 75 5.45e-20 90.1
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 77 151 5.45e-20 90.1
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 153 227 5.45e-20 90.1
MS.gene26186.t1 MTR_7g085590 27.928 222 145 3 144 361 43 253 5.98e-20 90.5
MS.gene26186.t1 MTR_4g080920 61.333 75 29 0 397 471 77 151 6.51e-20 89.0
MS.gene26186.t1 MTR_4g080920 61.333 75 29 0 397 471 1 75 1.39e-19 87.8
MS.gene26186.t1 MTR_4g080920 49.333 75 38 0 397 471 153 227 4.18e-14 72.0
MS.gene26186.t1 MTR_8g081020 62.667 75 28 0 397 471 1 75 9.74e-20 91.3
MS.gene26186.t1 MTR_8g081020 62.667 75 28 0 397 471 77 151 9.74e-20 91.3
MS.gene26186.t1 MTR_8g081020 62.667 75 28 0 397 471 153 227 9.74e-20 91.3
MS.gene26186.t1 MTR_8g081020 62.667 75 28 0 397 471 229 303 9.74e-20 91.3
MS.gene26186.t1 MTR_8g081020 62.667 75 28 0 397 471 305 379 9.74e-20 91.3
MS.gene26186.t1 MTR_4g091580 62.667 75 28 0 397 471 1 75 9.92e-20 91.3
MS.gene26186.t1 MTR_4g091580 62.667 75 28 0 397 471 77 151 9.92e-20 91.3
MS.gene26186.t1 MTR_4g091580 62.667 75 28 0 397 471 153 227 9.92e-20 91.3
MS.gene26186.t1 MTR_4g091580 62.667 75 28 0 397 471 305 379 9.92e-20 91.3
MS.gene26186.t1 MTR_4g091580 61.333 75 29 0 397 471 229 303 3.06e-19 89.7
MS.gene26186.t1 MTR_4g080797 62.667 75 28 0 397 471 1 75 1.03e-19 91.3
MS.gene26186.t1 MTR_4g080797 62.667 75 28 0 397 471 77 151 1.03e-19 91.3
MS.gene26186.t1 MTR_4g080797 62.667 75 28 0 397 471 153 227 1.03e-19 91.3
MS.gene26186.t1 MTR_4g080797 62.667 75 28 0 397 471 229 303 1.03e-19 91.3
MS.gene26186.t1 MTR_4g080797 62.667 75 28 0 397 471 305 379 1.03e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 1 75 1.03e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 77 151 1.03e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 153 227 1.03e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 229 303 1.03e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 305 379 1.03e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 1 75 1.05e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 77 151 1.05e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 153 227 1.05e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 229 303 1.05e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 305 379 1.05e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 1 75 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 77 151 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 153 227 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 229 303 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 305 379 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 381 455 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 1 75 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 77 151 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 153 227 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 229 303 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 305 379 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 381 455 1.77e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 1 75 2.42e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 77 151 2.42e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 153 227 2.42e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 229 303 2.42e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 305 379 2.42e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 381 455 2.42e-19 91.3
MS.gene26186.t1 MTR_8g018230 62.667 75 28 0 397 471 457 531 2.42e-19 91.3
MS.gene26186.t1 MTR_4g091580 61.333 75 29 0 397 471 305 379 2.46e-19 91.3
MS.gene26186.t1 MTR_4g091580 62.667 75 28 0 397 471 1 75 2.67e-19 90.9
MS.gene26186.t1 MTR_4g091580 62.667 75 28 0 397 471 77 151 2.67e-19 90.9
MS.gene26186.t1 MTR_4g091580 62.667 75 28 0 397 471 153 227 2.67e-19 90.9
MS.gene26186.t1 MTR_4g091580 62.667 75 28 0 397 471 229 303 2.67e-19 90.9
MS.gene26186.t1 MTR_4g091580 62.667 75 28 0 397 471 381 455 2.67e-19 90.9
MS.gene26186.t1 MTR_4g091580 62.667 75 28 0 397 471 457 531 2.67e-19 90.9
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 1 75 2.46e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 77 151 2.46e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 153 227 2.46e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 229 303 2.46e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 305 379 2.46e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 381 455 2.46e-19 91.3
MS.gene26186.t1 MTR_4g081010 62.667 75 28 0 397 471 457 531 2.46e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 77 151 3.47e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 153 227 3.47e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 229 303 3.47e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 305 379 3.47e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 381 455 3.47e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 457 531 3.47e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 533 607 3.47e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 609 683 3.47e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 685 759 3.47e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 761 835 3.47e-19 91.3
MS.gene26186.t1 MTR_4g088495 62.667 75 28 0 397 471 1 75 4.26e-19 90.9
MS.gene26186.t1 MTR_5g076680 75.472 53 12 1 129 180 10 62 7.40e-18 81.3
MS.gene26186.t1 MTR_8g038370 28.095 210 141 5 164 363 112 321 2.07e-17 84.0
MS.gene26186.t1 MTR_5g061310 48.684 76 39 0 397 472 2 77 1.22e-16 75.1
MS.gene26186.t1 MTR_3g017590 33.621 116 75 1 164 277 53 168 1.36e-16 80.9
MS.gene26186.t1 MTR_8g479250 57.831 83 35 0 389 471 133 215 4.04e-16 79.3
MS.gene26186.t1 MTR_8g479250 52.778 72 23 1 397 468 217 277 5.43e-13 70.1
MS.gene26186.t1 MTR_7g117415 32.812 128 84 1 153 278 50 177 6.46e-15 75.9
MS.gene26186.t1 MTR_3g091510 32.143 140 90 2 153 290 49 185 1.01e-14 75.5
MS.gene26186.t1 MTR_8g027520 34.545 110 72 0 152 261 41 150 1.05e-14 75.5
MS.gene26186.t1 MTR_8g027520 34.545 110 72 0 152 261 32 141 1.16e-14 75.1
MS.gene26186.t1 MTR_1g054335 26.667 210 144 5 163 362 57 266 4.83e-14 73.2
MS.gene26186.t1 MTR_4g009980 50.000 68 34 0 405 472 4 71 6.26e-14 67.0
MS.gene26186.t1 MTR_1g008120 31.206 141 92 2 152 290 56 193 7.06e-14 73.2
MS.gene26186.t1 MTR_7g093600 25.283 265 179 8 116 362 4 267 1.17e-13 72.0
MS.gene26186.t1 MTR_5g076350 45.455 77 41 1 397 472 8 84 2.37e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26186.t1 AT5G37930 33.613 238 154 2 157 390 103 340 5.75e-40 147
MS.gene26186.t1 AT5G37870 33.778 225 144 4 158 377 36 260 5.94e-36 134
MS.gene26186.t1 AT5G37890 31.461 267 164 6 115 377 14 265 6.35e-34 129
MS.gene26186.t1 AT1G66650 32.422 256 154 7 131 377 60 305 1.56e-32 126
MS.gene26186.t1 AT5G37910 31.624 234 154 3 150 377 21 254 1.05e-31 123
MS.gene26186.t1 AT1G66620 28.938 273 180 4 131 390 3 274 1.03e-30 121
MS.gene26186.t1 AT1G66660 31.225 253 162 6 150 391 89 340 1.55e-30 121
MS.gene26186.t1 AT5G62800 34.759 187 116 4 163 343 39 225 2.26e-26 109
MS.gene26186.t1 AT5G62800 34.759 187 116 4 163 343 39 225 2.56e-26 109
MS.gene26186.t1 AT1G66630 31.390 223 146 4 163 378 45 267 3.89e-24 102
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 1 75 2.37e-21 90.9
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 77 151 2.37e-21 90.9
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 1 75 2.37e-21 90.9
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 77 151 2.37e-21 90.9
MS.gene26186.t1 AT2G35635 62.667 75 28 0 397 471 1 75 2.43e-21 90.9
MS.gene26186.t1 AT1G31340 62.667 75 28 0 397 471 1 75 2.56e-21 90.9
MS.gene26186.t1 AT3G62250 62.667 75 28 0 397 471 1 75 2.63e-21 90.9
MS.gene26186.t1 AT2G47110 62.667 75 28 0 397 471 1 75 2.76e-21 90.9
MS.gene26186.t1 AT2G47110 62.667 75 28 0 397 471 1 75 2.76e-21 90.9
MS.gene26186.t1 AT1G23410 62.667 75 28 0 397 471 1 75 1.20e-20 89.0
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 1 75 1.26e-20 90.9
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 77 151 1.26e-20 90.9
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 153 227 1.26e-20 90.9
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 1 75 1.26e-20 90.9
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 77 151 1.26e-20 90.9
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 153 227 1.26e-20 90.9
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 1 75 1.26e-20 90.9
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 77 151 1.26e-20 90.9
MS.gene26186.t1 AT4G05050 62.667 75 28 0 397 471 153 227 1.26e-20 90.9
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 1 75 1.26e-20 90.9
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 77 151 1.26e-20 90.9
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 153 227 1.26e-20 90.9
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 1 75 1.26e-20 90.9
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 77 151 1.26e-20 90.9
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 153 227 1.26e-20 90.9
MS.gene26186.t1 AT3G52590 62.667 75 28 0 397 471 1 75 2.41e-20 87.0
MS.gene26186.t1 AT2G36170 62.667 75 28 0 397 471 1 75 2.41e-20 87.0
MS.gene26186.t1 AT5G37640 62.667 75 28 0 397 471 79 153 3.22e-20 91.7
MS.gene26186.t1 AT5G37640 60.000 75 30 0 397 471 155 229 1.38e-17 84.0
MS.gene26186.t1 AT5G37640 60.526 76 29 1 397 471 231 306 2.17e-16 80.5
MS.gene26186.t1 AT5G37640 53.333 75 35 0 397 471 3 77 6.00e-15 76.3
MS.gene26186.t1 AT1G55060 61.333 75 29 0 397 471 77 151 3.67e-20 89.7
MS.gene26186.t1 AT1G55060 60.000 75 30 0 397 471 153 227 2.64e-18 84.3
MS.gene26186.t1 AT1G55060 57.333 75 32 0 397 471 1 75 5.75e-18 83.2
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 1 75 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 77 151 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 153 227 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 229 303 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 1 75 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 77 151 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 153 227 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 229 303 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 1 75 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 77 151 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 153 227 4.25e-20 91.3
MS.gene26186.t1 AT5G03240 62.667 75 28 0 397 471 229 303 4.25e-20 91.3
MS.gene26186.t1 AT5G20620 62.667 75 28 0 397 471 1 75 4.25e-20 91.3
MS.gene26186.t1 AT5G20620 62.667 75 28 0 397 471 77 151 4.25e-20 91.3
MS.gene26186.t1 AT5G20620 62.667 75 28 0 397 471 153 227 4.25e-20 91.3
MS.gene26186.t1 AT5G20620 62.667 75 28 0 397 471 229 303 4.25e-20 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 1 75 4.31e-20 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 77 151 4.31e-20 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 153 227 4.31e-20 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 229 303 4.31e-20 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 1 75 4.31e-20 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 77 151 4.31e-20 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 153 227 4.31e-20 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 229 303 4.31e-20 91.3
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 1 75 4.31e-20 91.3
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 77 151 4.31e-20 91.3
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 153 227 4.31e-20 91.3
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 229 303 4.31e-20 91.3
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 1 75 4.31e-20 91.3
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 77 151 4.31e-20 91.3
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 153 227 4.31e-20 91.3
MS.gene26186.t1 AT4G02890 62.667 75 28 0 397 471 229 303 4.31e-20 91.3
MS.gene26186.t1 AT1G65350 62.667 75 28 0 397 471 1 75 4.69e-20 91.3
MS.gene26186.t1 AT1G65350 62.667 75 28 0 397 471 152 226 1.49e-19 89.7
MS.gene26186.t1 AT1G65350 61.333 75 28 1 397 471 77 150 1.93e-17 83.6
MS.gene26186.t1 AT1G65350 51.685 89 29 1 397 471 228 316 6.62e-15 75.9
MS.gene26186.t1 AT5G20620 62.667 75 28 0 397 471 1 75 1.05e-19 91.3
MS.gene26186.t1 AT5G20620 62.667 75 28 0 397 471 77 151 1.05e-19 91.3
MS.gene26186.t1 AT5G20620 62.667 75 28 0 397 471 153 227 1.05e-19 91.3
MS.gene26186.t1 AT5G20620 62.667 75 28 0 397 471 229 303 1.05e-19 91.3
MS.gene26186.t1 AT5G20620 62.667 75 28 0 397 471 305 379 1.05e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 1 75 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 77 151 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 153 227 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 229 303 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 305 379 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 1 75 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 77 151 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 153 227 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 229 303 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 305 379 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 1 75 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 77 151 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 153 227 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 229 303 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 305 379 1.08e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 1 75 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 77 151 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 153 227 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 229 303 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 305 379 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 381 455 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 1 75 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 77 151 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 153 227 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 229 303 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 305 379 1.86e-19 91.3
MS.gene26186.t1 AT4G05320 62.667 75 28 0 397 471 381 455 1.86e-19 91.3
MS.gene26186.t1 AT3G09790 61.333 75 29 0 397 471 79 153 1.74e-17 85.9
MS.gene26186.t1 AT3G09790 57.333 75 32 0 397 471 3 77 5.87e-16 80.9
MS.gene26186.t1 AT3G09790 50.685 73 36 0 397 469 552 624 1.19e-11 67.4
MS.gene26186.t1 AT3G09790 61.333 75 29 0 397 471 79 153 1.74e-17 85.9
MS.gene26186.t1 AT3G09790 57.333 75 32 0 397 471 3 77 5.87e-16 80.9
MS.gene26186.t1 AT3G09790 50.685 73 36 0 397 469 552 624 1.19e-11 67.4
MS.gene26186.t1 AT1G66660 28.788 198 129 6 205 391 20 216 1.60e-15 76.3
MS.gene26186.t1 AT3G61790 35.238 105 68 0 155 259 51 155 1.40e-14 75.1
MS.gene26186.t1 AT3G58040 29.921 127 88 1 164 290 57 182 5.75e-14 71.6
MS.gene26186.t1 AT3G58040 25.837 209 145 5 164 362 57 265 7.73e-14 72.8
MS.gene26186.t1 AT3G58040 25.837 209 145 5 164 362 57 265 7.73e-14 72.8
MS.gene26186.t1 AT4G27880 32.558 129 82 2 164 290 61 186 1.19e-13 72.4
MS.gene26186.t1 AT2G41980 33.673 98 65 0 164 261 54 151 7.18e-13 69.7
MS.gene26186.t1 AT1G53930 46.575 73 39 0 397 469 86 158 9.28e-13 66.6
MS.gene26186.t1 AT1G66610 31.818 110 74 1 122 230 115 224 2.94e-11 63.9
MS.gene26186.t1 AT1G53950 41.333 75 44 0 397 471 69 143 5.18e-11 61.2

Find 86 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAGAATCCCCGTGTTTA+TGG 0.126665 5.4:+57671863 None:intergenic
CACCTTGTCCTCCGCCTTCT+TGG 0.139255 5.4:-57671108 MS.gene26186:CDS
TTGCAGCACTCAAGCAAATT+AGG 0.141972 5.4:+57672818 None:intergenic
CCCTGTTACTGTCCCTTTCC+AGG 0.241413 5.4:-57673323 MS.gene26186:CDS
TTTGAGAATCCCCGTGTTTA+TGG 0.252861 5.4:+57673255 None:intergenic
ACCTTGTCCTCCGCCTTCTT+GGG 0.253046 5.4:-57671107 MS.gene26186:CDS
ACAAAGTCACATCCTGAAAA+TGG 0.263384 5.4:+57671919 None:intergenic
TCCTGAAAATGGACAGTAAC+AGG 0.279926 5.4:+57671930 None:intergenic
TCCTGGAAAGGGACAGTAAC+AGG 0.288244 5.4:+57673322 None:intergenic
AAAATCATCTCTTTCACTTT+GGG 0.291475 5.4:+57671240 None:intergenic
AGTAACCCGTTGGACATTCT+TGG 0.294714 5.4:+57671612 None:intergenic
ACAGAGAAACTAGAAATTAT+AGG 0.298509 5.4:+57673047 None:intergenic
AGGGACAGTAACAGGGCTTA+TGG 0.300784 5.4:+57673330 None:intergenic
GCTGTCAATATTTGCTGCTT+TGG 0.309542 5.4:-57671715 MS.gene26186:CDS
CCATGTCCGAATGCAAAATA+TGG 0.313132 5.4:-57672015 MS.gene26186:CDS
AATAATAGTACTATGTTGTT+AGG 0.345128 5.4:-57671742 MS.gene26186:CDS
ATGGACAGTAACAGGGCTTA+TGG 0.353543 5.4:+57671938 None:intergenic
TGACACTCGTTCCAAAGTTT+AGG 0.359248 5.4:+57672108 None:intergenic
TTTACAACGTTTAGAGCTAA+TGG 0.363973 5.4:+57672071 None:intergenic
AGCTTATATGAAGCAAAATA+TGG 0.369903 5.4:+57673152 None:intergenic
ATCTATGTAAAGGGTCTAGA+TGG 0.375383 5.4:-57671303 MS.gene26186:CDS
TGCAGCACTCAAGCAAATTA+GGG 0.375478 5.4:+57672819 None:intergenic
TGCAGATTACAACGTCAAAA+AGG 0.375617 5.4:-57671142 MS.gene26186:CDS
CCATGTCCGAATGCAAAATA+TGG 0.389988 5.4:-57673407 MS.gene26186:CDS
GAGTTCCTTGTGATTCCATT+TGG 0.390707 5.4:-57671571 MS.gene26186:CDS
AAAATATGGCCACATACGTC+TGG 0.391341 5.4:+57673166 None:intergenic
CTTCATGATTTGTCTGCCTA+AGG 0.391596 5.4:+57673363 None:intergenic
GAAAATCATCTCTTTCACTT+TGG 0.396588 5.4:+57671239 None:intergenic
ATCAGACGTTGGGCGTGCAC+TGG 0.398715 5.4:+57671201 None:intergenic
GCCCAACGTCTGATCTTTGC+TGG 0.415935 5.4:-57671192 MS.gene26186:CDS
GGGACAGTAACAGGGCTTAT+GGG 0.416127 5.4:+57673331 None:intergenic
CGAATGCAAAATATGGTTGC+AGG 0.426913 5.4:-57672008 MS.gene26186:CDS
CGAATGCAAAATATGGTTGC+AGG 0.426913 5.4:-57673400 MS.gene26186:CDS
CTACTTGCTGTCCTAAACTT+TGG 0.429461 5.4:-57672119 MS.gene26186:CDS
GATGTGTACTTTGGCACATT+TGG 0.430857 5.4:+57673088 None:intergenic
GTATGCAACTCGATGGCAAC+CGG 0.449827 5.4:-57671170 MS.gene26186:CDS
GGTTTCATCATCAGACTTCA+AGG 0.452534 5.4:+57671807 None:intergenic
CGTTGTAATCTGCAAGGGTC+CGG 0.457118 5.4:+57671151 None:intergenic
GCAGATGCAAATCTATGTAA+AGG 0.490691 5.4:-57671313 MS.gene26186:intron
TACTCAGACTCAGAAGCGTC+TGG 0.490998 5.4:+57671691 None:intergenic
GTTGCTACCGATGTGTACTT+TGG 0.491765 5.4:+57673079 None:intergenic
TGAGTATAGTTACGATATGT+TGG 0.492716 5.4:-57671674 MS.gene26186:CDS
CAGATGCAAATCTATGTAAA+GGG 0.507120 5.4:-57671312 MS.gene26186:CDS
CCCCAAGAAGGCGGAGGACA+AGG 0.509638 5.4:+57671106 None:intergenic
ACCAGCAAAGATCAGACGTT+GGG 0.512651 5.4:+57671191 None:intergenic
CTGCAAAGCCCAGACGTATG+TGG 0.515582 5.4:-57673175 MS.gene26186:CDS
CCTTGTCCTCCGCCTTCTTG+GGG 0.516184 5.4:-57671106 MS.gene26186:CDS
TTCTCAAATCAAATCTAAAG+TGG 0.518276 5.4:-57673240 MS.gene26186:CDS
GAAGGCGGAGGACAAGGTGG+AGG 0.519053 5.4:+57671112 None:intergenic
AGAGGTTCGAAAGAACCAAA+TGG 0.528774 5.4:+57671556 None:intergenic
GATTCAACAAAGTCACATCC+TGG 0.531359 5.4:+57673305 None:intergenic
TCAGACGTTGGGCGTGCACT+GGG 0.537871 5.4:+57671202 None:intergenic
AATGGAATCACAAGGAACTC+TGG 0.539435 5.4:+57671574 None:intergenic
GCACTCAAGCAAATTAGGGT+TGG 0.551048 5.4:+57672823 None:intergenic
TTTGACGTTGTAATCTGCAA+GGG 0.554769 5.4:+57671146 None:intergenic
ATGCAAATTTCTAAGTTGAG+AGG 0.555054 5.4:+57671538 None:intergenic
TTGACGTTAAGAGTTCATAC+AGG 0.555320 5.4:-57671266 MS.gene26186:CDS
ACAAAGTCACATCCTGGAAA+GGG 0.560926 5.4:+57673311 None:intergenic
TGCATTTCAGCCATAAACAC+GGG 0.562870 5.4:-57673265 MS.gene26186:CDS
AACAAAGTCACATCCTGGAA+AGG 0.568485 5.4:+57673310 None:intergenic
CTATTAGGCAAAAGATGAAG+TGG 0.582360 5.4:-57672924 MS.gene26186:intron
AGACTTCAAGGAGATAATGA+AGG 0.588983 5.4:+57671819 None:intergenic
GATTTGCTAAAGTAACCCGT+TGG 0.604139 5.4:+57671602 None:intergenic
AAATATGGCCACATACGTCT+GGG 0.604553 5.4:+57673167 None:intergenic
TGAAACCATTGTTCTTCGAG+AGG 0.606566 5.4:-57671791 MS.gene26186:CDS
AAGGCGGAGGACAAGGTGGA+GGG 0.612344 5.4:+57671113 None:intergenic
ATGCATTTCAGCCATAAACA+CGG 0.617311 5.4:-57673266 MS.gene26186:CDS
TGGTCATCTAGTCCCCAAGA+AGG 0.623962 5.4:+57671094 None:intergenic
TGATAGCAATAGATTCTCAA+CGG 0.627080 5.4:+57672047 None:intergenic
CCTGAAAATGGACAGTAACA+GGG 0.627412 5.4:+57671931 None:intergenic
TCTAGTCCCCAAGAAGGCGG+AGG 0.628903 5.4:+57671100 None:intergenic
TTTGCTGGTATGCAACTCGA+TGG 0.631021 5.4:-57671177 MS.gene26186:CDS
CAAGAAGGCGGAGGACAAGG+TGG 0.631891 5.4:+57671109 None:intergenic
GGGTCTAGATGGAAAGACAA+TGG 0.637376 5.4:-57671292 MS.gene26186:CDS
GAATGCAAAATATGGTTGCA+GGG 0.639123 5.4:-57672007 MS.gene26186:CDS
GAATGCAAAATATGGTTGCA+GGG 0.639123 5.4:-57673399 MS.gene26186:CDS
TGTATGAACTCTTAACGTCA+AGG 0.640853 5.4:+57671268 None:intergenic
CCTGGAAAGGGACAGTAACA+GGG 0.643610 5.4:+57673323 None:intergenic
GTTGGAAATCACAAGAGGAA+CGG 0.646160 5.4:+57672841 None:intergenic
TACCAGCAAAGATCAGACGT+TGG 0.660071 5.4:+57671190 None:intergenic
TTAGGGTTGGAAATCACAAG+AGG 0.666490 5.4:+57672836 None:intergenic
TCATCTAGTCCCCAAGAAGG+CGG 0.681661 5.4:+57671097 None:intergenic
AAGAACCAAATGGAATCACA+AGG 0.686822 5.4:+57671566 None:intergenic
AAATGTGCCAAAGTACACAT+CGG 0.705798 5.4:-57673086 MS.gene26186:CDS
GGATATAGGAGGTACCCTGG+GGG 0.713946 5.4:+57671504 None:intergenic
GCATTTCAGCCATAAACACG+GGG 0.722344 5.4:-57673264 MS.gene26186:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTTAAACACTATT+AGG - chr5.4:57671572-57671591 MS.gene26186:CDS 10.0%
!! AATATAGTTATCAAAGTTAA+TGG + chr5.4:57672189-57672208 None:intergenic 15.0%
!! GAAGATAATAACAATTTAAT+AGG + chr5.4:57673054-57673073 None:intergenic 15.0%
!! TATAAAATCTCAAAAATAGA+AGG + chr5.4:57672137-57672156 None:intergenic 15.0%
!! AAAATAACAAAGCAAAGAAA+AGG + chr5.4:57673031-57673050 None:intergenic 20.0%
!! AATAATAGTACTATGTTGTT+AGG - chr5.4:57672769-57672788 MS.gene26186:intron 20.0%
!! TCTTGAAATATACTAGAAAA+AGG + chr5.4:57671855-57671874 None:intergenic 20.0%
!!! ACAAAGACATTCTTTAAAAA+AGG - chr5.4:57671394-57671413 MS.gene26186:intron 20.0%
!!! ATCAAAGCATTTAAAATTGT+TGG + chr5.4:57672001-57672020 None:intergenic 20.0%
!!! CAAAGACATTCTTTAAAAAA+GGG - chr5.4:57671395-57671414 MS.gene26186:intron 20.0%
!!! TCAAAGCATTTAAAATTGTT+GGG + chr5.4:57672000-57672019 None:intergenic 20.0%
!!! TCTCAAATCAAATTTTCTTA+TGG - chr5.4:57672664-57672683 MS.gene26186:intron 20.0%
!!! TTTGAGATTTTATATTTGCA+TGG - chr5.4:57672143-57672162 MS.gene26186:CDS 20.0%
!!! TTTTTAAAGAATGTCTTTGT+CGG + chr5.4:57671394-57671413 None:intergenic 20.0%
! AAAATCATCTCTTTCACTTT+GGG + chr5.4:57673274-57673293 None:intergenic 25.0%
! AAACAAGTCTTAAGTCTATA+AGG + chr5.4:57672037-57672056 None:intergenic 25.0%
! ACAAATACATACCTGAAAAA+CGG + chr5.4:57671742-57671761 None:intergenic 25.0%
! ACAGAGAAACTAGAAATTAT+AGG + chr5.4:57671467-57671486 None:intergenic 25.0%
! AGCTTATATGAAGCAAAATA+TGG + chr5.4:57671362-57671381 None:intergenic 25.0%
! TTCTCAAATCAAATCTAAAG+TGG - chr5.4:57671271-57671290 MS.gene26186:CDS 25.0%
!! AATCTAAAGTGGAGAAAAAT+AGG - chr5.4:57671282-57671301 MS.gene26186:CDS 25.0%
!! CTATATTGTCGTAACATTTT+TGG - chr5.4:57672202-57672221 MS.gene26186:intron 25.0%
!! TATACTTTTGATCACATAAC+TGG - chr5.4:57672299-57672318 MS.gene26186:intron 25.0%
!! TCATATATGCAATATGCTTT+TGG - chr5.4:57671814-57671833 MS.gene26186:CDS 25.0%
!! TCTATTGTTGATCGTTTTAT+TGG - chr5.4:57673165-57673184 MS.gene26186:CDS 25.0%
!!! TAGTATGATTAGCTTTATGT+TGG - chr5.4:57672275-57672294 MS.gene26186:intron 25.0%
CAAAGCAAAGAAAAGGATAT+AGG + chr5.4:57673024-57673043 None:intergenic 30.0%
CAAATACATACCTGAAAAAC+GGG + chr5.4:57671741-57671760 None:intergenic 30.0%
CAGATGCAAATCTATGTAAA+GGG - chr5.4:57673199-57673218 MS.gene26186:CDS 30.0%
GAAAATCATCTCTTTCACTT+TGG + chr5.4:57673275-57673294 None:intergenic 30.0%
TCTTAAGTCTATAAGGCTTA+AGG + chr5.4:57672030-57672049 None:intergenic 30.0%
TGAAAAACGGGAATCATTAA+GGG + chr5.4:57671729-57671748 None:intergenic 30.0%
TGAGTATAGTTACGATATGT+TGG - chr5.4:57672837-57672856 MS.gene26186:CDS 30.0%
TGATAGCAATAGATTCTCAA+CGG + chr5.4:57672467-57672486 None:intergenic 30.0%
! AAGACTTGTTTGCTTTACAT+TGG - chr5.4:57672046-57672065 MS.gene26186:CDS 30.0%
! AATCACTAACAACACGTTTT+TGG + chr5.4:57673137-57673156 None:intergenic 30.0%
! AGACTTGTTTGCTTTACATT+GGG - chr5.4:57672047-57672066 MS.gene26186:CDS 30.0%
! ATGCAAATTTCTAAGTTGAG+AGG + chr5.4:57672976-57672995 None:intergenic 30.0%
! ATGCATTTTTGCCATAAACA+CGG - chr5.4:57672637-57672656 MS.gene26186:intron 30.0%
! GAATTTGAGATCAAAAGCTA+TGG + chr5.4:57673098-57673117 None:intergenic 30.0%
! GCTGTTCTTACTATCTTTTA+CGG + chr5.4:57671649-57671668 None:intergenic 30.0%
! TTTACAACGTTTAGAGCTAA+TGG + chr5.4:57672443-57672462 None:intergenic 30.0%
AAATGTGCCAAAGTACACAT+CGG - chr5.4:57671425-57671444 MS.gene26186:intron 35.0%
AAGAACCAAATGGAATCACA+AGG + chr5.4:57672948-57672967 None:intergenic 35.0%
ACAAAGTCACATCCTGAAAA+TGG + chr5.4:57672595-57672614 None:intergenic 35.0%
AGACTTCAAGGAGATAATGA+AGG + chr5.4:57672695-57672714 None:intergenic 35.0%
AGCAAAGAAAAGGATATAGG+AGG + chr5.4:57673021-57673040 None:intergenic 35.0%
ATCTATGTAAAGGGTCTAGA+TGG - chr5.4:57673208-57673227 MS.gene26186:CDS 35.0%
ATGCATTTCAGCCATAAACA+CGG - chr5.4:57671245-57671264 MS.gene26186:CDS 35.0%
CTATTAGGCAAAAGATGAAG+TGG - chr5.4:57671587-57671606 MS.gene26186:CDS 35.0%
CTGAAAAACGGGAATCATTA+AGG + chr5.4:57671730-57671749 None:intergenic 35.0%
GAATGCAAAATATGGTTGCA+GGG - chr5.4:57671112-57671131 MS.gene26186:CDS 35.0%
GAGTTTCACATAGCACTTAA+GGG + chr5.4:57671899-57671918 None:intergenic 35.0%
GCAGATGCAAATCTATGTAA+AGG - chr5.4:57673198-57673217 MS.gene26186:CDS 35.0%
TGCAGATTACAACGTCAAAA+AGG - chr5.4:57673369-57673388 MS.gene26186:CDS 35.0%
TGTATGAACTCTTAACGTCA+AGG + chr5.4:57673246-57673265 None:intergenic 35.0%
TTGACGTTAAGAGTTCATAC+AGG - chr5.4:57673245-57673264 MS.gene26186:CDS 35.0%
TTTGACGTTGTAATCTGCAA+GGG + chr5.4:57673368-57673387 None:intergenic 35.0%
! ATTTTCCTCTCGAAGAACAA+TGG + chr5.4:57672728-57672747 None:intergenic 35.0%
! CTGCAACCATATTTTGCATT+CGG + chr5.4:57671113-57671132 None:intergenic 35.0%
! GAAAGAGATGATTTTCGACA+TGG - chr5.4:57673279-57673298 MS.gene26186:CDS 35.0%
! TGCATTTTTGCCATAAACAC+GGG - chr5.4:57672638-57672657 MS.gene26186:intron 35.0%
! TTTTGACGTTGTAATCTGCA+AGG + chr5.4:57673369-57673388 None:intergenic 35.0%
!! CTTAATGATTCCCGTTTTTC+AGG - chr5.4:57671728-57671747 MS.gene26186:CDS 35.0%
!! GATCGTTTTATTGGCAATTG+TGG - chr5.4:57673174-57673193 MS.gene26186:CDS 35.0%
!! GGTTAACAAAGTCGATTTGA+TGG - chr5.4:57672320-57672339 MS.gene26186:intron 35.0%
AAAATATGGCCACATACGTC+TGG + chr5.4:57671348-57671367 None:intergenic 40.0%
AAATATGGCCACATACGTCT+GGG + chr5.4:57671347-57671366 None:intergenic 40.0%
AACAAAGTCACATCCTGGAA+AGG + chr5.4:57671204-57671223 None:intergenic 40.0%
AATGGAATCACAAGGAACTC+TGG + chr5.4:57672940-57672959 None:intergenic 40.0%
ACAAAGTCACATCCTGGAAA+GGG + chr5.4:57671203-57671222 None:intergenic 40.0%
AGAGGTTCGAAAGAACCAAA+TGG + chr5.4:57672958-57672977 None:intergenic 40.0%
ATCACCGTTATCAGTCACTT+AGG + chr5.4:57671963-57671982 None:intergenic 40.0%
CCATGTCCGAATGCAAAATA+TGG - chr5.4:57671104-57671123 MS.gene26186:CDS 40.0%
CCTGAAAATGGACAGTAACA+GGG + chr5.4:57672583-57672602 None:intergenic 40.0%
CGAATGCAAAATATGGTTGC+AGG - chr5.4:57671111-57671130 MS.gene26186:CDS 40.0%
GAGTTCCTTGTGATTCCATT+TGG - chr5.4:57672940-57672959 MS.gene26186:intron 40.0%
GATGTGTACTTTGGCACATT+TGG + chr5.4:57671426-57671445 None:intergenic 40.0%
GATTCAACAAAGTCACATCC+TGG + chr5.4:57671209-57671228 None:intergenic 40.0%
GGAGTTTCACATAGCACTTA+AGG + chr5.4:57671900-57671919 None:intergenic 40.0%
GGGTGAAAAATACGTACATG+AGG - chr5.4:57672524-57672543 MS.gene26186:intron 40.0%
GGGTGAAAAATACGTACCTT+AGG - chr5.4:57671132-57671151 MS.gene26186:CDS 40.0%
GGTTTCATCATCAGACTTCA+AGG + chr5.4:57672707-57672726 None:intergenic 40.0%
GTGACCTAAGTGACTGATAA+CGG - chr5.4:57671956-57671975 MS.gene26186:CDS 40.0%
GTTGGAAATCACAAGAGGAA+CGG + chr5.4:57671673-57671692 None:intergenic 40.0%
TCCACGAATAGACATTTGGA+GGG - chr5.4:57671934-57671953 MS.gene26186:CDS 40.0%
TCCTGAAAATGGACAGTAAC+AGG + chr5.4:57672584-57672603 None:intergenic 40.0%
TGAAACCATTGTTCTTCGAG+AGG - chr5.4:57672720-57672739 MS.gene26186:intron 40.0%
TGACACTCGTTCCAAAGTTT+AGG + chr5.4:57672406-57672425 None:intergenic 40.0%
TGCAGCACTCAAGCAAATTA+GGG + chr5.4:57671695-57671714 None:intergenic 40.0%
TGCATTTCAGCCATAAACAC+GGG - chr5.4:57671246-57671265 MS.gene26186:CDS 40.0%
TTAGGGTTGGAAATCACAAG+AGG + chr5.4:57671678-57671697 None:intergenic 40.0%
TTGCAGCACTCAAGCAAATT+AGG + chr5.4:57671696-57671715 None:intergenic 40.0%
TTTCACATAGCACTTAAGGG+AGG + chr5.4:57671896-57671915 None:intergenic 40.0%
TTTGAGAATCCCCGTGTTTA+TGG + chr5.4:57671259-57671278 None:intergenic 40.0%
! CCATATTTTGCATTCGGACA+TGG + chr5.4:57671107-57671126 None:intergenic 40.0%
! CTTCATGATTTGTCTGCCTA+AGG + chr5.4:57671151-57671170 None:intergenic 40.0%
! CTTTTGCCAAGAATGTCCAA+CGG - chr5.4:57672893-57672912 MS.gene26186:CDS 40.0%
! GCATTTTTGCCATAAACACG+GGG - chr5.4:57672639-57672658 MS.gene26186:intron 40.0%
! GCTGTCAATATTTGCTGCTT+TGG - chr5.4:57672796-57672815 MS.gene26186:CDS 40.0%
! TTTTGCCAAGAATGTCCAAC+GGG - chr5.4:57672894-57672913 MS.gene26186:CDS 40.0%
!! CTACTTGCTGTCCTAAACTT+TGG - chr5.4:57672392-57672411 MS.gene26186:intron 40.0%
!! GATTTGCTAAAGTAACCCGT+TGG + chr5.4:57672912-57672931 None:intergenic 40.0%
ACCAGCAAAGATCAGACGTT+GGG + chr5.4:57673323-57673342 None:intergenic 45.0%
ACCCTCCAAATGTCTATTCG+TGG + chr5.4:57671938-57671957 None:intergenic 45.0%
AGTAACCCGTTGGACATTCT+TGG + chr5.4:57672902-57672921 None:intergenic 45.0%
ATGGACAGTAACAGGGCTTA+TGG + chr5.4:57672576-57672595 None:intergenic 45.0%
CACGTCCACGAATAGACATT+TGG - chr5.4:57671930-57671949 MS.gene26186:CDS 45.0%
GCACTCAAGCAAATTAGGGT+TGG + chr5.4:57671691-57671710 None:intergenic 45.0%
GCATTTCAGCCATAAACACG+GGG - chr5.4:57671247-57671266 MS.gene26186:CDS 45.0%
GGGTCTAGATGGAAAGACAA+TGG - chr5.4:57673219-57673238 MS.gene26186:CDS 45.0%
GTCCACGAATAGACATTTGG+AGG - chr5.4:57671933-57671952 MS.gene26186:CDS 45.0%
GTTGCTACCGATGTGTACTT+TGG + chr5.4:57671435-57671454 None:intergenic 45.0%
TACCAGCAAAGATCAGACGT+TGG + chr5.4:57673324-57673343 None:intergenic 45.0%
TTTGCTGGTATGCAACTCGA+TGG - chr5.4:57673334-57673353 MS.gene26186:CDS 45.0%
! CCCTGTTACTGTCCATTTTC+AGG - chr5.4:57672580-57672599 MS.gene26186:intron 45.0%
! TTTTGGTACCAGCTACTGTC+AGG - chr5.4:57672219-57672238 MS.gene26186:intron 45.0%
!! AAAGGATATAGGAGGTACCC+TGG + chr5.4:57673013-57673032 None:intergenic 45.0%
!! AAGGATATAGGAGGTACCCT+GGG + chr5.4:57673012-57673031 None:intergenic 45.0%
!! AGTGACTGATAACGGTGATC+TGG - chr5.4:57671964-57671983 MS.gene26186:CDS 45.0%
ACTCAATGCCTGACAGTAGC+TGG + chr5.4:57672230-57672249 None:intergenic 50.0%
AGGGACAGTAACAGGGCTTA+TGG + chr5.4:57671184-57671203 None:intergenic 50.0%
CCTGGAAAGGGACAGTAACA+GGG + chr5.4:57671191-57671210 None:intergenic 50.0%
CGTTGTAATCTGCAAGGGTC+CGG + chr5.4:57673363-57673382 None:intergenic 50.0%
GGGACAGTAACAGGGCTTAT+GGG + chr5.4:57671183-57671202 None:intergenic 50.0%
GTATGCAACTCGATGGCAAC+CGG - chr5.4:57673341-57673360 MS.gene26186:CDS 50.0%
TCCTGGAAAGGGACAGTAAC+AGG + chr5.4:57671192-57671211 None:intergenic 50.0%
TCGTGGACGTGACAACACAA+AGG + chr5.4:57671921-57671940 None:intergenic 50.0%
!! AGGATATAGGAGGTACCCTG+GGG + chr5.4:57673011-57673030 None:intergenic 50.0%
!! TACTCAGACTCAGAAGCGTC+TGG + chr5.4:57672823-57672842 None:intergenic 50.0%
ACCTTGTCCTCCGCCTTCTT+GGG - chr5.4:57673404-57673423 MS.gene26186:CDS 55.0%
CCCTGTTACTGTCCCTTTCC+AGG - chr5.4:57671188-57671207 MS.gene26186:CDS 55.0%
CTGCAAAGCCCAGACGTATG+TGG - chr5.4:57671336-57671355 MS.gene26186:intron 55.0%
GCCCAACGTCTGATCTTTGC+TGG - chr5.4:57673319-57673338 MS.gene26186:CDS 55.0%
!! GGATATAGGAGGTACCCTGG+GGG + chr5.4:57673010-57673029 None:intergenic 55.0%
AAGGCGGAGGACAAGGTGGA+GGG + chr5.4:57673401-57673420 None:intergenic 60.0%
ATCAGACGTTGGGCGTGCAC+TGG + chr5.4:57673313-57673332 None:intergenic 60.0%
CAAGAAGGCGGAGGACAAGG+TGG + chr5.4:57673405-57673424 None:intergenic 60.0%
CACCTTGTCCTCCGCCTTCT+TGG - chr5.4:57673403-57673422 MS.gene26186:CDS 60.0%
CCTTGTCCTCCGCCTTCTTG+GGG - chr5.4:57673405-57673424 MS.gene26186:CDS 60.0%
TCAGACGTTGGGCGTGCACT+GGG + chr5.4:57673312-57673331 None:intergenic 60.0%
! CATAACTTGCGCAGCCCCCA+GGG - chr5.4:57672993-57673012 MS.gene26186:intron 60.0%
CCCCAAGAAGGCGGAGGACA+AGG + chr5.4:57673408-57673427 None:intergenic 65.0%
GAAGGCGGAGGACAAGGTGG+AGG + chr5.4:57673402-57673421 None:intergenic 65.0%
! GCATAACTTGCGCAGCCCCC+AGG - chr5.4:57672992-57673011 MS.gene26186:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 57671101 57673432 57671101 ID=MS.gene26186
chr5.4 mRNA 57671101 57673432 57671101 ID=MS.gene26186.t1;Parent=MS.gene26186
chr5.4 exon 57673049 57673432 57673049 ID=MS.gene26186.t1.exon1;Parent=MS.gene26186.t1
chr5.4 CDS 57673049 57673432 57673049 ID=cds.MS.gene26186.t1;Parent=MS.gene26186.t1
chr5.4 exon 57672784 57672939 57672784 ID=MS.gene26186.t1.exon2;Parent=MS.gene26186.t1
chr5.4 CDS 57672784 57672939 57672784 ID=cds.MS.gene26186.t1;Parent=MS.gene26186.t1
chr5.4 exon 57671519 57672166 57671519 ID=MS.gene26186.t1.exon3;Parent=MS.gene26186.t1
chr5.4 CDS 57671519 57672166 57671519 ID=cds.MS.gene26186.t1;Parent=MS.gene26186.t1
chr5.4 exon 57671101 57671331 57671101 ID=MS.gene26186.t1.exon4;Parent=MS.gene26186.t1
chr5.4 CDS 57671101 57671331 57671101 ID=cds.MS.gene26186.t1;Parent=MS.gene26186.t1
Gene Sequence

>MS.gene26186

ATGCCATGTCCGAATGCAAAATATGGTTGCAGGGTGAAAAATACGTACCTTAGGCAGACAAATCATGAAGAAGAATGCACCCATAAGCCCTGTTACTGTCCCTTTCCAGGATGTGACTTTGTTGAATCATCAAAAGTGTTGTCTATGCATTTCAGCCATAAACACGGGGATTCTCAAATCAAATCTAAAGTGGAGAAAAATAGGCACATTAAGCTGACGAGAACTCATGTTTTTTCTGCAAAGCCCAGACGTATGTGGCCATATTTTGCTTCATATAAGCTTAGTTACATCCGACAAAGACATTCTTTAAAAAAGGGCACTGCCAAATGTGCCAAAGTACACATCGGTAGCAACGTGATTATGCCTATAATTTCTAGTTTCTCTGTGAGTATTTTGTTTTAATAGCTTGATTTTATTTTGCTAGAACAACGTGATTATGCTTTACTCAAAAACATGATTTTGATTATGTATTTATTTTTTTAAACACTATTAGGCAAAAGATGAAGTGGAGACATGCAACAAAGACTATCTAGAGATCGTTAATTCCGTAAAAGATAGTAAGAACAGCTCCGTTCCTCTTGTGATTTCCAACCCTAATTTGCTTGAGTGCTGCAATTGTTTTCAACCCTTAATGATTCCCGTTTTTCAGGTATGTATTTGTTTTATTTGATTTCATAAGTTATTTTCTATATCTGAGAAGAGTTAATCTGATGTCATATATGCAATATGCTTTTGGTCATTAAATTTGATACCTTTTTCTAGTATATTTCAAGATTGTATTTAATATACACTCCTCCCTTAAGTGCTATGTGAAACTCCTTTGTGTTGTCACGTCCACGAATAGACATTTGGAGGGTGACCTAAGTGACTGATAACGGTGATCTGGTAACAAACGACCCAACAATTTTAAATGCTTTGATGAGCTACCTTAAGCCTTATAGACTTAAGACTTGTTTGCTTTACATTGGGTTCGAATATTAGTAACAATGAACTTTGATAAATAATTATGAATGTCTTGAATATTGTTGTATATCCTTCTATTTTTGAGATTTTATATTTGCATGGTACGAACTTCTTGTATTTTTCCATTAACTTTGATAACTATATTGTCGTAACATTTTTGGTACCAGCTACTGTCAGGCATTGAGTACACAGATTTTAAGAATAATAAACTTAGTATGATTAGCTTTATGTTGGTTATACTTTTGATCACATAACTGGTTAACAAAGTCGATTTGATGGTTTTTTTTTTGCTGCAAAATACAGTGTGATAATGCTCATATTGTTTGCTCTACTTGCTGTCCTAAACTTTGGAACGAGTGTCACAAGTGCTCGTTGTCCATTAGCTCTAAACGTTGTAAAGCCGTTGAGAATCTATTGCTATCAATTGAAATTCCATGTCCGAATGCAAAATATGGTTGCAGGGTGAAAAATACGTACATGAGGCAGACAAATCATGAAGAAGAATGCATCCATAAGCCCTGTTACTGTCCATTTTCAGGATGTGACTTTGTTGAATCATCAAAAGTGTTGTCTATGCATTTTTGCCATAAACACGGGGATTCTCAAATCAAATTTTCTTATGGTCAATCCTTCATTATCTCCTTGAAGTCTGATGATGAAACCATTGTTCTTCGAGAGGAAAATGATGACAAACTATTTATTCTCAATAATAGTACTATGTTGTTAGGAAATGCTGTCAATATTTGCTGCTTTGGTCCAGACGCTTCTGAGTCTGAGTATAGTTACGATATGTTGGCTACGTCTCAGATATGTAAACTGAAATTACACTCTTTTGCCAAGAATGTCCAACGGGTTACTTTAGCAAATCTTTCACCAGAGTTCCTTGTGATTCCATTTGGTTCTTTCGAACCTCTCAACTTAGAAATTTGCATAACTTGCGCAGCCCCCAGGGTACCTCCTATATCCTTTTCTTTGCTTTGTTATTTTCCTATTAAATTGTTATTATCTTCTTTCTATGTATTGAATTTATACCATAGCTTTTGATCTCAAATTCATCACTATTTCAAATGCCAAAAACGTGTTGTTAGTGATTTCTTTTTTTCTATTGTTGATCGTTTTATTGGCAATTGTGGTGCAGATGCAAATCTATGTAAAGGGTCTAGATGGAAAGACAATGGTCCTTGACGTTAAGAGTTCATACAGGATGCCCAAAGTGAAAGAGATGATTTTCGACATGGTTGATATCCCAGTGCACGCCCAACGTCTGATCTTTGCTGGTATGCAACTCGATGGCAACCGGACCCTTGCAGATTACAACGTCAAAAAGGAATCAACCCTCCACCTTGTCCTCCGCCTTCTTGGGGACTAG

Protein sequence

>MS.gene26186.t1

MPCPNAKYGCRVKNTYLRQTNHEEECTHKPCYCPFPGCDFVESSKVLSMHFSHKHGDSQIKSKVEKNRHIKLTRTHVFSAKPRRMWPYFASYKLSYIRQRHSLKKGTAKCAKVHIGSNVIMPIISSFSAKDEVETCNKDYLEIVNSVKDSKNSSVPLVISNPNLLECCNCFQPLMIPVFQCDNAHIVCSTCCPKLWNECHKCSLSISSKRCKAVENLLLSIEIPCPNAKYGCRVKNTYMRQTNHEEECIHKPCYCPFSGCDFVESSKVLSMHFCHKHGDSQIKFSYGQSFIISLKSDDETIVLREENDDKLFILNNSTMLLGNAVNICCFGPDASESEYSYDMLATSQICKLKLHSFAKNVQRVTLANLSPEFLVIPFGSFEPLNLEICITCAAPRMQIYVKGLDGKTMVLDVKSSYRMPKVKEMIFDMVDIPVHAQRLIFAGMQLDGNRTLADYNVKKESTLHLVLRLLGD