Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009566.t1 | AES99109.2 | 64 | 336 | 106 | 3 | 7 | 328 | 1 | 335 | 2.40E-111 | 412.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009566.t1 | Q84K34 | 35.1 | 239 | 152 | 1 | 20 | 255 | 102 | 340 | 1.7e-36 | 154.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009566.t1 | G7KFS2 | 64.0 | 336 | 106 | 3 | 7 | 328 | 1 | 335 | 1.8e-111 | 412.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009566.t1 | MTR_5g076660 | 63.988 | 336 | 106 | 3 | 7 | 328 | 1 | 335 | 2.77e-144 | 411 |
MS.gene009566.t1 | MTR_5g067400 | 62.581 | 310 | 115 | 1 | 19 | 328 | 2 | 310 | 4.55e-136 | 389 |
MS.gene009566.t1 | MTR_1g046640 | 62.136 | 309 | 115 | 2 | 19 | 327 | 2 | 308 | 9.63e-133 | 381 |
MS.gene009566.t1 | MTR_1g046650 | 61.489 | 309 | 117 | 2 | 19 | 327 | 2 | 308 | 2.92e-130 | 375 |
MS.gene009566.t1 | MTR_1g046650 | 61.489 | 309 | 117 | 2 | 19 | 327 | 33 | 339 | 7.58e-130 | 375 |
MS.gene009566.t1 | MTR_7g024290 | 61.415 | 311 | 118 | 2 | 19 | 328 | 2 | 311 | 8.63e-130 | 374 |
MS.gene009566.t1 | MTR_2g038430 | 57.407 | 324 | 124 | 3 | 15 | 325 | 12 | 334 | 1.79e-122 | 356 |
MS.gene009566.t1 | MTR_2g038420 | 59.561 | 319 | 123 | 3 | 15 | 328 | 12 | 329 | 1.30e-121 | 353 |
MS.gene009566.t1 | MTR_5g076370 | 56.061 | 330 | 140 | 3 | 3 | 328 | 8 | 336 | 5.17e-119 | 347 |
MS.gene009566.t1 | MTR_7g094390 | 56.037 | 323 | 137 | 2 | 12 | 330 | 156 | 477 | 6.99e-119 | 352 |
MS.gene009566.t1 | MTR_1g046650 | 61.404 | 285 | 108 | 2 | 43 | 327 | 26 | 308 | 2.42e-116 | 339 |
MS.gene009566.t1 | MTR_5g061290 | 54.829 | 321 | 134 | 6 | 15 | 328 | 5 | 321 | 9.82e-113 | 330 |
MS.gene009566.t1 | MTR_5g076520 | 54.952 | 313 | 136 | 3 | 19 | 327 | 2 | 313 | 9.59e-110 | 323 |
MS.gene009566.t1 | MTR_5g076810 | 60.821 | 268 | 103 | 2 | 66 | 332 | 2 | 268 | 9.90e-108 | 316 |
MS.gene009566.t1 | MTR_5g076720 | 50.152 | 329 | 160 | 2 | 3 | 328 | 57 | 384 | 1.43e-104 | 312 |
MS.gene009566.t1 | MTR_5g076820 | 58.456 | 272 | 104 | 6 | 21 | 287 | 13 | 280 | 1.41e-95 | 286 |
MS.gene009566.t1 | MTR_1g046650 | 60.996 | 241 | 92 | 2 | 87 | 327 | 1 | 239 | 4.21e-95 | 283 |
MS.gene009566.t1 | MTR_5g076505 | 51.724 | 290 | 136 | 2 | 42 | 328 | 21 | 309 | 4.47e-95 | 285 |
MS.gene009566.t1 | MTR_5g076540 | 59.227 | 233 | 94 | 1 | 19 | 251 | 2 | 233 | 1.39e-86 | 261 |
MS.gene009566.t1 | MTR_4g094468 | 44.351 | 239 | 127 | 3 | 20 | 255 | 89 | 324 | 3.27e-60 | 196 |
MS.gene009566.t1 | MTR_5g077020 | 54.774 | 199 | 76 | 5 | 68 | 257 | 15 | 208 | 1.35e-58 | 189 |
MS.gene009566.t1 | MTR_4g058025 | 62.810 | 121 | 43 | 2 | 98 | 217 | 14 | 133 | 1.12e-41 | 144 |
MS.gene009566.t1 | MTR_7g085590 | 31.122 | 196 | 123 | 4 | 15 | 210 | 50 | 233 | 6.10e-25 | 102 |
MS.gene009566.t1 | MTR_7g105080 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.20e-17 | 78.6 |
MS.gene009566.t1 | MTR_3g092130 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.20e-17 | 78.6 |
MS.gene009566.t1 | MTR_1g059690 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.20e-17 | 78.6 |
MS.gene009566.t1 | MTR_5g092700 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 2.33e-17 | 78.6 |
MS.gene009566.t1 | MTR_4g073580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 2.33e-17 | 78.6 |
MS.gene009566.t1 | MTR_8g088060 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 3.68e-17 | 77.8 |
MS.gene009566.t1 | MTR_5g033960 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.55e-17 | 77.8 |
MS.gene009566.t1 | MTR_4g073580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.72e-17 | 78.6 |
MS.gene009566.t1 | MTR_3g092130 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 5.98e-17 | 77.0 |
MS.gene009566.t1 | MTR_7g116360 | 59.155 | 71 | 29 | 0 | 258 | 328 | 48 | 118 | 8.85e-17 | 79.7 |
MS.gene009566.t1 | MTR_7g116360 | 53.750 | 80 | 37 | 0 | 249 | 328 | 115 | 194 | 3.04e-16 | 78.2 |
MS.gene009566.t1 | MTR_7g116360 | 53.750 | 80 | 37 | 0 | 249 | 328 | 191 | 270 | 3.04e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g088495 | 60.000 | 70 | 28 | 0 | 259 | 328 | 1 | 70 | 1.26e-16 | 81.6 |
MS.gene009566.t1 | MTR_4g088495 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.54e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g088495 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.54e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g088495 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 1.54e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g088495 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 1.54e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g088495 | 58.571 | 70 | 29 | 0 | 259 | 328 | 381 | 450 | 1.54e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g088495 | 58.571 | 70 | 29 | 0 | 259 | 328 | 457 | 526 | 1.54e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g088495 | 58.571 | 70 | 29 | 0 | 259 | 328 | 533 | 602 | 1.54e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g088495 | 58.571 | 70 | 29 | 0 | 259 | 328 | 609 | 678 | 1.54e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g088495 | 58.571 | 70 | 29 | 0 | 259 | 328 | 685 | 754 | 1.54e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g088495 | 58.571 | 70 | 29 | 0 | 259 | 328 | 761 | 830 | 1.54e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g088485 | 53.750 | 80 | 37 | 0 | 249 | 328 | 128 | 207 | 1.33e-16 | 77.8 |
MS.gene009566.t1 | MTR_4g088485 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.37e-16 | 77.8 |
MS.gene009566.t1 | MTR_7g116360 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.59e-16 | 78.2 |
MS.gene009566.t1 | MTR_7g116360 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.59e-16 | 78.2 |
MS.gene009566.t1 | MTR_7g116360 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.59e-16 | 78.2 |
MS.gene009566.t1 | MTR_1g066390 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.77e-16 | 77.8 |
MS.gene009566.t1 | MTR_1g066390 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.77e-16 | 77.8 |
MS.gene009566.t1 | MTR_1g066390 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.77e-16 | 77.8 |
MS.gene009566.t1 | MTR_4g080920 | 53.750 | 80 | 37 | 0 | 249 | 328 | 67 | 146 | 1.78e-16 | 77.8 |
MS.gene009566.t1 | MTR_4g080920 | 57.143 | 70 | 30 | 0 | 259 | 328 | 1 | 70 | 1.81e-15 | 75.1 |
MS.gene009566.t1 | MTR_4g080920 | 46.250 | 80 | 43 | 0 | 249 | 328 | 143 | 222 | 2.35e-11 | 63.2 |
MS.gene009566.t1 | MTR_8g018230 | 53.750 | 80 | 37 | 0 | 249 | 328 | 67 | 146 | 3.14e-16 | 77.8 |
MS.gene009566.t1 | MTR_8g018230 | 53.750 | 80 | 37 | 0 | 249 | 328 | 143 | 222 | 3.14e-16 | 77.8 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 3.26e-16 | 77.8 |
MS.gene009566.t1 | MTR_6g061930 | 53.750 | 80 | 37 | 0 | 249 | 328 | 67 | 146 | 3.94e-16 | 78.2 |
MS.gene009566.t1 | MTR_6g061930 | 53.750 | 80 | 37 | 0 | 249 | 328 | 204 | 283 | 3.94e-16 | 78.2 |
MS.gene009566.t1 | MTR_6g061930 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.05e-16 | 77.8 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.62e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 4.62e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 4.62e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 4.62e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 5.74e-16 | 79.3 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.35e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.35e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.35e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 1.35e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 381 | 450 | 1.35e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 457 | 526 | 1.35e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 5.98e-16 | 78.6 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 8.30e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 8.30e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 8.30e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g091580 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 8.30e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 6.30e-16 | 77.4 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 6.30e-16 | 77.4 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 6.30e-16 | 77.4 |
MS.gene009566.t1 | MTR_8g081020 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 7.42e-16 | 78.2 |
MS.gene009566.t1 | MTR_8g081020 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 7.42e-16 | 78.2 |
MS.gene009566.t1 | MTR_8g081020 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 7.42e-16 | 78.2 |
MS.gene009566.t1 | MTR_8g081020 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 7.42e-16 | 78.2 |
MS.gene009566.t1 | MTR_8g081020 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 7.42e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g080797 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 8.46e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g080797 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 8.46e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g080797 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 8.46e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g080797 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 8.46e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g080797 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 8.46e-16 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 8.46e-16 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 8.46e-16 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 8.46e-16 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 8.46e-16 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 8.46e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 8.54e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 8.54e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 8.54e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 8.54e-16 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 8.54e-16 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 381 | 450 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 381 | 450 | 1.14e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.32e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.32e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.32e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 1.32e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 1.32e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 381 | 450 | 1.32e-15 | 78.2 |
MS.gene009566.t1 | MTR_8g018230 | 58.571 | 70 | 29 | 0 | 259 | 328 | 457 | 526 | 1.32e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.33e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.33e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.33e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 1.33e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 1.33e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 381 | 450 | 1.33e-15 | 78.2 |
MS.gene009566.t1 | MTR_4g081010 | 58.571 | 70 | 29 | 0 | 259 | 328 | 457 | 526 | 1.33e-15 | 78.2 |
MS.gene009566.t1 | MTR_5g061310 | 50.000 | 70 | 35 | 0 | 259 | 328 | 2 | 71 | 3.03e-15 | 70.5 |
MS.gene009566.t1 | MTR_8g027520 | 29.139 | 151 | 104 | 2 | 29 | 179 | 45 | 192 | 6.60e-15 | 74.7 |
MS.gene009566.t1 | MTR_8g027520 | 29.139 | 151 | 104 | 2 | 29 | 179 | 54 | 201 | 7.51e-15 | 74.7 |
MS.gene009566.t1 | MTR_3g091510 | 31.746 | 126 | 85 | 1 | 29 | 154 | 61 | 185 | 6.72e-14 | 72.0 |
MS.gene009566.t1 | MTR_1g008120 | 30.952 | 126 | 86 | 1 | 29 | 154 | 69 | 193 | 5.87e-13 | 69.3 |
MS.gene009566.t1 | MTR_8g479250 | 55.000 | 80 | 36 | 0 | 249 | 328 | 131 | 210 | 1.45e-12 | 67.8 |
MS.gene009566.t1 | MTR_7g117415 | 30.159 | 126 | 87 | 1 | 29 | 154 | 62 | 186 | 1.97e-12 | 67.4 |
MS.gene009566.t1 | MTR_8g038370 | 29.134 | 127 | 87 | 2 | 29 | 154 | 113 | 237 | 1.17e-11 | 65.5 |
MS.gene009566.t1 | MTR_4g009980 | 46.269 | 67 | 32 | 1 | 268 | 330 | 5 | 71 | 1.39e-11 | 60.1 |
MS.gene009566.t1 | MTR_3g017590 | 29.310 | 116 | 80 | 1 | 29 | 142 | 54 | 169 | 1.74e-11 | 64.7 |
MS.gene009566.t1 | MTR_5g076740 | 47.761 | 67 | 34 | 1 | 258 | 323 | 85 | 151 | 1.96e-11 | 62.0 |
MS.gene009566.t1 | MTR_1g054335 | 31.034 | 116 | 78 | 1 | 29 | 142 | 59 | 174 | 2.16e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009566.t1 | AT5G37930 | 34.677 | 248 | 158 | 2 | 21 | 265 | 103 | 349 | 8.97e-44 | 154 |
MS.gene009566.t1 | AT5G37890 | 33.778 | 225 | 146 | 2 | 20 | 241 | 40 | 264 | 2.20e-38 | 138 |
MS.gene009566.t1 | AT1G66620 | 34.615 | 234 | 145 | 5 | 29 | 255 | 42 | 274 | 3.36e-38 | 138 |
MS.gene009566.t1 | AT5G37870 | 30.556 | 252 | 169 | 4 | 16 | 261 | 30 | 281 | 4.69e-36 | 132 |
MS.gene009566.t1 | AT5G37910 | 32.099 | 243 | 158 | 4 | 20 | 255 | 27 | 269 | 1.26e-32 | 123 |
MS.gene009566.t1 | AT1G66630 | 29.278 | 263 | 163 | 5 | 16 | 255 | 34 | 296 | 1.18e-29 | 115 |
MS.gene009566.t1 | AT1G66650 | 32.411 | 253 | 159 | 7 | 17 | 258 | 72 | 323 | 8.14e-28 | 111 |
MS.gene009566.t1 | AT5G62800 | 29.259 | 270 | 181 | 7 | 15 | 275 | 27 | 295 | 1.22e-27 | 111 |
MS.gene009566.t1 | AT5G62800 | 32.663 | 199 | 129 | 3 | 15 | 208 | 27 | 225 | 3.19e-27 | 109 |
MS.gene009566.t1 | AT1G66660 | 25.200 | 250 | 178 | 5 | 16 | 256 | 91 | 340 | 8.53e-22 | 95.1 |
MS.gene009566.t1 | AT5G37900 | 29.756 | 205 | 129 | 4 | 63 | 256 | 35 | 235 | 2.65e-18 | 83.2 |
MS.gene009566.t1 | AT1G65350 | 60.000 | 70 | 28 | 0 | 259 | 328 | 152 | 221 | 7.51e-18 | 83.6 |
MS.gene009566.t1 | AT1G65350 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 7.09e-16 | 77.8 |
MS.gene009566.t1 | AT1G65350 | 57.143 | 70 | 29 | 1 | 259 | 328 | 77 | 145 | 2.82e-13 | 70.1 |
MS.gene009566.t1 | AT3G52590 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.61e-17 | 78.2 |
MS.gene009566.t1 | AT2G36170 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.61e-17 | 78.2 |
MS.gene009566.t1 | AT2G47110 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 3.18e-17 | 78.2 |
MS.gene009566.t1 | AT2G47110 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 3.18e-17 | 78.2 |
MS.gene009566.t1 | AT3G62250 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 3.51e-17 | 78.2 |
MS.gene009566.t1 | AT1G23410 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 3.61e-17 | 78.2 |
MS.gene009566.t1 | AT2G35635 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 3.88e-17 | 77.8 |
MS.gene009566.t1 | AT1G31340 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.15e-17 | 77.8 |
MS.gene009566.t1 | AT4G05050 | 53.750 | 80 | 37 | 0 | 249 | 328 | 67 | 146 | 4.28e-17 | 77.8 |
MS.gene009566.t1 | AT4G05050 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.41e-17 | 77.8 |
MS.gene009566.t1 | AT4G05320 | 53.750 | 80 | 37 | 0 | 249 | 328 | 67 | 146 | 4.28e-17 | 77.8 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.41e-17 | 77.8 |
MS.gene009566.t1 | AT5G37640 | 54.321 | 81 | 37 | 0 | 248 | 328 | 68 | 148 | 1.08e-16 | 80.1 |
MS.gene009566.t1 | AT5G37640 | 52.500 | 80 | 38 | 0 | 249 | 328 | 145 | 224 | 3.66e-14 | 72.8 |
MS.gene009566.t1 | AT5G37640 | 53.086 | 81 | 35 | 2 | 249 | 328 | 223 | 301 | 2.33e-13 | 70.5 |
MS.gene009566.t1 | AT4G05050 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G05050 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G05050 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G05050 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G05050 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G05050 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G05050 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G05050 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G05050 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.67e-16 | 78.2 |
MS.gene009566.t1 | AT3G09790 | 53.750 | 80 | 37 | 0 | 249 | 328 | 69 | 148 | 3.07e-16 | 80.1 |
MS.gene009566.t1 | AT3G09790 | 57.143 | 70 | 30 | 0 | 259 | 328 | 552 | 621 | 1.55e-14 | 75.1 |
MS.gene009566.t1 | AT3G09790 | 51.429 | 70 | 34 | 0 | 259 | 328 | 3 | 72 | 1.67e-12 | 68.9 |
MS.gene009566.t1 | AT3G09790 | 53.750 | 80 | 37 | 0 | 249 | 328 | 69 | 148 | 3.07e-16 | 80.1 |
MS.gene009566.t1 | AT3G09790 | 57.143 | 70 | 30 | 0 | 259 | 328 | 552 | 621 | 1.55e-14 | 75.1 |
MS.gene009566.t1 | AT3G09790 | 51.429 | 70 | 34 | 0 | 259 | 328 | 3 | 72 | 1.67e-12 | 68.9 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT4G02890 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 4.79e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G03240 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G20620 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G20620 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G20620 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT5G20620 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 4.85e-16 | 78.2 |
MS.gene009566.t1 | AT1G55060 | 57.143 | 70 | 30 | 0 | 259 | 328 | 77 | 146 | 5.63e-16 | 76.6 |
MS.gene009566.t1 | AT1G55060 | 52.500 | 80 | 38 | 0 | 249 | 328 | 143 | 222 | 1.99e-15 | 75.1 |
MS.gene009566.t1 | AT1G55060 | 52.857 | 70 | 33 | 0 | 259 | 328 | 1 | 70 | 4.86e-14 | 71.2 |
MS.gene009566.t1 | AT5G20620 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 8.42e-16 | 78.2 |
MS.gene009566.t1 | AT5G20620 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 8.42e-16 | 78.2 |
MS.gene009566.t1 | AT5G20620 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 8.42e-16 | 78.2 |
MS.gene009566.t1 | AT5G20620 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 8.42e-16 | 78.2 |
MS.gene009566.t1 | AT5G20620 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 8.42e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 8.86e-16 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 381 | 450 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 1 | 70 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 77 | 146 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 153 | 222 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 229 | 298 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 305 | 374 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT4G05320 | 58.571 | 70 | 29 | 0 | 259 | 328 | 381 | 450 | 1.20e-15 | 78.2 |
MS.gene009566.t1 | AT1G66610 | 28.477 | 151 | 106 | 2 | 93 | 241 | 183 | 333 | 1.31e-14 | 74.3 |
MS.gene009566.t1 | AT1G66610 | 42.623 | 61 | 35 | 0 | 29 | 89 | 54 | 114 | 5.03e-11 | 63.5 |
MS.gene009566.t1 | AT1G53930 | 50.000 | 70 | 35 | 0 | 259 | 328 | 86 | 155 | 2.75e-14 | 70.1 |
MS.gene009566.t1 | AT3G61790 | 30.159 | 126 | 87 | 1 | 29 | 154 | 61 | 185 | 2.58e-13 | 70.1 |
MS.gene009566.t1 | AT4G27880 | 30.822 | 146 | 96 | 2 | 11 | 154 | 44 | 186 | 5.70e-13 | 69.3 |
MS.gene009566.t1 | AT1G66610 | 42.623 | 61 | 35 | 0 | 29 | 89 | 54 | 114 | 6.71e-11 | 62.0 |
Find 73 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACGCTACTATTATGATATTT+TGG | 0.157177 | 5.3:+62064300 | MS.gene009566:CDS |
AGCAAAGTCACAACCTAAAA+TGG | 0.183798 | 5.3:-62064053 | None:intergenic |
CCTTGTGCAAATGGCTAAAA+TGG | 0.220076 | 5.3:-62064099 | None:intergenic |
AGGGGCTACCATATGAAAAT+TGG | 0.296646 | 5.3:-62064132 | None:intergenic |
TGTATGATTTATCTAGCTAT+AGG | 0.332023 | 5.3:-62064914 | None:intergenic |
ACTGTTCTCTTGAAGAATAA+TGG | 0.356172 | 5.3:-62064185 | None:intergenic |
CACCAGCATTATCTGTTCCT+TGG | 0.374771 | 5.3:+62064787 | MS.gene009566:CDS |
AAGGGATAATCTTTCCAGTC+AGG | 0.403562 | 5.3:-62064693 | None:intergenic |
GTATGATTTATCTAGCTATA+GGG | 0.406518 | 5.3:-62064913 | None:intergenic |
GCCTGCATTACACGGTGATT+TGG | 0.410167 | 5.3:-62062468 | None:intergenic |
GGTAAAGGATGGACTTATCT+TGG | 0.415625 | 5.3:-62064855 | None:intergenic |
CTTGACTATCCCTGTGTTCG+AGG | 0.422546 | 5.3:+62062575 | MS.gene009566:CDS |
GCAAAGTCACAACCTAAAAT+GGG | 0.423707 | 5.3:-62064052 | None:intergenic |
AATTTCTAACTTGAGTAGTT+CGG | 0.430490 | 5.3:-62064431 | None:intergenic |
GGCTTCATCAATAAACTTCA+AGG | 0.433969 | 5.3:-62064164 | None:intergenic |
AATGGCTCTGGATCGTTTCA+AGG | 0.434530 | 5.3:-62063906 | None:intergenic |
TTCGAGAATCCTTGTGCAAA+TGG | 0.437698 | 5.3:-62064108 | None:intergenic |
CATCTAGTTGCTTATTTCCA+AGG | 0.440781 | 5.3:-62064804 | None:intergenic |
CAATAGATTCTCAATGGCTC+TGG | 0.452098 | 5.3:-62063918 | None:intergenic |
TTCTTCAAGAGAACAGTGTT+GGG | 0.454309 | 5.3:+62064191 | MS.gene009566:CDS |
TGGAAAGATTATCCCTTTGA+AGG | 0.467459 | 5.3:+62064699 | MS.gene009566:CDS |
GCAGTCAATATTAGCTGCAT+TGG | 0.470841 | 5.3:+62064256 | MS.gene009566:CDS |
AAAACTGTGGAACTTTGCAC+TGG | 0.471427 | 5.3:-62064338 | None:intergenic |
AACTTCAAGGTGACAAAGAA+GGG | 0.477193 | 5.3:-62064151 | None:intergenic |
GAGGGTCGCCGACGAGGTAA+AGG | 0.477240 | 5.3:-62064870 | None:intergenic |
ATCTTTGTACAAACCCTGAC+TGG | 0.477369 | 5.3:+62064679 | MS.gene009566:CDS |
GTTCCCATGTTTAGAACAGC+AGG | 0.480246 | 5.3:-62063855 | None:intergenic |
ATTCTTCAAGAGAACAGTGT+TGG | 0.492231 | 5.3:+62064190 | MS.gene009566:CDS |
TCTGAACTCTCCACCTTCAA+AGG | 0.496142 | 5.3:-62064712 | None:intergenic |
GAATAACTTATAGTGGAAAG+AGG | 0.502573 | 5.3:+62063990 | MS.gene009566:CDS |
GTTGCAATTCAGTGTGATAA+TGG | 0.502832 | 5.3:+62063815 | MS.gene009566:intron |
GCCAAATCACCGTGTAATGC+AGG | 0.504554 | 5.3:+62062467 | MS.gene009566:intron |
GACATGCATACCTCGAACAC+AGG | 0.508448 | 5.3:-62062585 | None:intergenic |
GTAGCGTGGTTCAGAAGAGT+TGG | 0.511055 | 5.3:-62064284 | None:intergenic |
AAGGAGAGAATAACTTATAG+TGG | 0.516242 | 5.3:+62063983 | MS.gene009566:CDS |
CCTAAAATGGGGTAGTAACA+TGG | 0.523694 | 5.3:-62064040 | None:intergenic |
AAACTTCAAGGTGACAAAGA+AGG | 0.527821 | 5.3:-62064152 | None:intergenic |
AGGGATAATCTTTCCAGTCA+GGG | 0.534012 | 5.3:-62064692 | None:intergenic |
TTGGATGTCGTAATCATCAA+TGG | 0.545303 | 5.3:-62064836 | None:intergenic |
CTGAACTCTCCACCTTCAAA+GGG | 0.545740 | 5.3:-62064711 | None:intergenic |
TTCCAAGGAACAGATAATGC+TGG | 0.548367 | 5.3:-62064789 | None:intergenic |
TAGCGTGGTTCAGAAGAGTT+GGG | 0.548704 | 5.3:-62064283 | None:intergenic |
TCTACCTGCTGTTCTAAACA+TGG | 0.558526 | 5.3:+62063851 | MS.gene009566:CDS |
AGAAGTCTCTTCACAGTCGT+TGG | 0.562361 | 5.3:-62062496 | None:intergenic |
CATGATGAGGGTCGCCGACG+AGG | 0.562993 | 5.3:-62064876 | None:intergenic |
AAATAATAGAACTGAGAGTG+TGG | 0.568562 | 5.3:+62064228 | MS.gene009566:CDS |
GAGTGGTTGTCTTCATGATG+AGG | 0.569206 | 5.3:-62064889 | None:intergenic |
GAAGGTGGAGAGTTCAGATA+CGG | 0.573368 | 5.3:+62064717 | MS.gene009566:CDS |
TTATCTAGCTATAGGGTGAG+TGG | 0.581253 | 5.3:-62064906 | None:intergenic |
AGATTGCAATAGATTCTCAA+TGG | 0.582302 | 5.3:-62063924 | None:intergenic |
GAATGTAAAACACGGTTGCA+AGG | 0.585808 | 5.3:+62063964 | MS.gene009566:CDS |
AAAGATTATCCCTTTGAAGG+TGG | 0.598975 | 5.3:+62064702 | MS.gene009566:CDS |
AATAATAGAACTGAGAGTGT+GGG | 0.601725 | 5.3:+62064229 | MS.gene009566:CDS |
GAGTTTCTAAAGAAACTCGT+TGG | 0.603280 | 5.3:-62064372 | None:intergenic |
GTCGCCGACGAGGTAAAGGA+TGG | 0.603797 | 5.3:-62064866 | None:intergenic |
GCAATCAAACGCATGAGGGT+CGG | 0.603929 | 5.3:-62062535 | None:intergenic |
TGCAGCAATCAAACGCATGA+GGG | 0.606914 | 5.3:-62062539 | None:intergenic |
ATGCAGCAATCAAACGCATG+AGG | 0.610999 | 5.3:-62062540 | None:intergenic |
TGGTATGTGCCTGCATTACA+CGG | 0.621391 | 5.3:-62062476 | None:intergenic |
AAGTCCATCCTTTACCTCGT+CGG | 0.626464 | 5.3:+62064862 | MS.gene009566:CDS |
CTACCTGCTGTTCTAAACAT+GGG | 0.638267 | 5.3:+62063852 | MS.gene009566:CDS |
AGTGGTTGTCTTCATGATGA+GGG | 0.639161 | 5.3:-62064888 | None:intergenic |
ACTTCAAGGTGACAAAGAAG+GGG | 0.652282 | 5.3:-62064150 | None:intergenic |
TGTCGTAATCATCAATGGTG+AGG | 0.657734 | 5.3:-62064831 | None:intergenic |
ACATGCATACCTCGAACACA+GGG | 0.660447 | 5.3:-62062584 | None:intergenic |
AAAATATCATAATAGTAGCG+TGG | 0.660800 | 5.3:-62064298 | None:intergenic |
CGTAATCATCAATGGTGAGG+CGG | 0.661754 | 5.3:-62064828 | None:intergenic |
CAAAGTCACAACCTAAAATG+GGG | 0.675928 | 5.3:-62064051 | None:intergenic |
CTCGAACACAGGGATAGTCA+AGG | 0.675930 | 5.3:-62062574 | None:intergenic |
GGTGGAGAGTTCAGATACGG+TGG | 0.683257 | 5.3:+62064720 | MS.gene009566:CDS |
TCATGTCTGAATGTAAAACA+CGG | 0.708463 | 5.3:+62063956 | MS.gene009566:CDS |
CGTGGTTCAGAAGAGTTGGG+AGG | 0.713627 | 5.3:-62064280 | None:intergenic |
AAAGGAGATACATACCTTGG+GGG | 0.725796 | 5.3:-62064461 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTATATAATAAAATA+TGG | - | chr5.3:62061850-62061869 | None:intergenic | 0.0% |
!! | AAAAAAAATTAAAATTGAGT+TGG | + | chr5.3:62063687-62063706 | MS.gene009566:intron | 10.0% |
!!! | AATTAATATTTTTGTTATGA+GGG | - | chr5.3:62063637-62063656 | None:intergenic | 10.0% |
!!! | ATTTCAATTTTTTTTTTTAC+AGG | + | chr5.3:62062205-62062224 | MS.gene009566:intron | 10.0% |
!!! | TAATTAATATTTTTGTTATG+AGG | - | chr5.3:62063638-62063657 | None:intergenic | 10.0% |
!!! | TTAATTTTTTTTCCTTAAAT+GGG | - | chr5.3:62063679-62063698 | None:intergenic | 10.0% |
!!! | TTTAATTTTTTTTCCTTAAA+TGG | - | chr5.3:62063680-62063699 | None:intergenic | 10.0% |
!!! | TTTCAATTTTTTTTTTTACA+GGG | + | chr5.3:62062206-62062225 | MS.gene009566:intron | 10.0% |
!! | AAAAACCAAATTGAATTAAA+AGG | - | chr5.3:62064411-62064430 | None:intergenic | 15.0% |
!! | ACTTTATCATTATATAATCA+AGG | - | chr5.3:62062281-62062300 | None:intergenic | 15.0% |
!! | ATATAATGATAAAGTTGTAA+TGG | + | chr5.3:62062286-62062305 | MS.gene009566:intron | 15.0% |
!! | ATTTATAAAGAAAACTTCAA+CGG | - | chr5.3:62063275-62063294 | None:intergenic | 15.0% |
!! | GTAAAAACAATTAAAAATTC+TGG | - | chr5.3:62061919-62061938 | None:intergenic | 15.0% |
!! | TATGTGTTGAAATATTATTT+AGG | - | chr5.3:62063019-62063038 | None:intergenic | 15.0% |
!! | TTATTGAATATATGTGAAAA+TGG | + | chr5.3:62062921-62062940 | MS.gene009566:intron | 15.0% |
!!! | AAAAAACAAAAAATTTTGCA+GGG | + | chr5.3:62062178-62062197 | MS.gene009566:intron | 15.0% |
!!! | GAAGTTTTCTTTATAAATTA+AGG | + | chr5.3:62063277-62063296 | MS.gene009566:intron | 15.0% |
!!! | TAAAAAACAAAAAATTTTGC+AGG | + | chr5.3:62062177-62062196 | MS.gene009566:intron | 15.0% |
!!! | TTATTATTGATTAGTTTTGT+TGG | + | chr5.3:62064636-62064655 | MS.gene009566:intron | 15.0% |
!! | AAATTAAAACAATTACCACA+TGG | + | chr5.3:62062065-62062084 | MS.gene009566:intron | 20.0% |
!! | CAACTTTATCATTATATAGT+TGG | - | chr5.3:62062391-62062410 | None:intergenic | 20.0% |
!! | CAATAATTCAACTACTAAAT+AGG | - | chr5.3:62063416-62063435 | None:intergenic | 20.0% |
!! | CTATTTAGTAGTTGAATTAT+TGG | + | chr5.3:62063414-62063433 | MS.gene009566:intron | 20.0% |
!! | TAAAAAACCAAATCATTTGA+CGG | - | chr5.3:62063303-62063322 | None:intergenic | 20.0% |
!!! | AAAGTGTTTTTTTACAACAA+AGG | - | chr5.3:62062967-62062986 | None:intergenic | 20.0% |
!!! | TAATTTGTTGTCATATTTTG+TGG | + | chr5.3:62062624-62062643 | MS.gene009566:intron | 20.0% |
! | AAAATATCATAATAGTAGCG+TGG | - | chr5.3:62064301-62064320 | None:intergenic | 25.0% |
! | AATTTCTAACTTGAGTAGTT+CGG | - | chr5.3:62064434-62064453 | None:intergenic | 25.0% |
! | CCAGAAAAAAAAACTAAAAC+AGG | - | chr5.3:62064607-62064626 | None:intergenic | 25.0% |
! | GAAAATCATCAAGTTAGATT+TGG | - | chr5.3:62063789-62063808 | None:intergenic | 25.0% |
! | TGATAGAGTTAAAATTCGAA+AGG | - | chr5.3:62064536-62064555 | None:intergenic | 25.0% |
! | TTATTTAGTAGCAAACTTGT+TGG | + | chr5.3:62063364-62063383 | MS.gene009566:intron | 25.0% |
!! | ACGCTACTATTATGATATTT+TGG | + | chr5.3:62064300-62064319 | MS.gene009566:CDS | 25.0% |
!! | AGATGTCAAAAATGTTTTAC+AGG | + | chr5.3:62063878-62063897 | MS.gene009566:CDS | 25.0% |
!! | TTTTTCCCTCAAAATATGAA+AGG | - | chr5.3:62062667-62062686 | None:intergenic | 25.0% |
!!! | ACTATTATGATATTTTGGCT+AGG | + | chr5.3:62064305-62064324 | MS.gene009566:CDS | 25.0% |
!!! | ATACTCCTTTCATATTTTGA+GGG | + | chr5.3:62062659-62062678 | MS.gene009566:intron | 25.0% |
!!! | ATTAGTTTTGTTGGTAATTG+TGG | + | chr5.3:62064645-62064664 | MS.gene009566:intron | 25.0% |
!!! | ATTTTTTTTCCTTAAATGGG+AGG | - | chr5.3:62063676-62063695 | None:intergenic | 25.0% |
!!! | CCTGTTTTAGTTTTTTTTTC+TGG | + | chr5.3:62064604-62064623 | MS.gene009566:intron | 25.0% |
!!! | GAGTTCCTTTTAATTCAATT+TGG | + | chr5.3:62064403-62064422 | MS.gene009566:CDS | 25.0% |
!!! | TACCAAACCTTTAAAATTGT+CGG | + | chr5.3:62063475-62063494 | MS.gene009566:intron | 25.0% |
!!! | TGAATACTTATTTTACACGA+GGG | - | chr5.3:62063450-62063469 | None:intergenic | 25.0% |
!!! | TTGTTTTTTAAAAAGGTCCT+TGG | - | chr5.3:62062167-62062186 | None:intergenic | 25.0% |
AAATAATAGAACTGAGAGTG+TGG | + | chr5.3:62064228-62064247 | MS.gene009566:CDS | 30.0% | |
AACACATAGCAATGATATTG+TGG | + | chr5.3:62063031-62063050 | MS.gene009566:intron | 30.0% | |
AACATTAATCCTCCCATTTA+AGG | + | chr5.3:62063664-62063683 | MS.gene009566:intron | 30.0% | |
AAGGAGAGAATAACTTATAG+TGG | + | chr5.3:62063983-62064002 | MS.gene009566:CDS | 30.0% | |
ACTGTTCTCTTGAAGAATAA+TGG | - | chr5.3:62064188-62064207 | None:intergenic | 30.0% | |
AGATTGCAATAGATTCTCAA+TGG | - | chr5.3:62063927-62063946 | None:intergenic | 30.0% | |
ATAGCAATGATATTGTGGTT+TGG | + | chr5.3:62063036-62063055 | MS.gene009566:intron | 30.0% | |
CAAAAATTTGTGACAAGGAA+TGG | + | chr5.3:62064755-62064774 | MS.gene009566:CDS | 30.0% | |
GAAAGCAAAAATTTGTGACA+AGG | + | chr5.3:62064750-62064769 | MS.gene009566:CDS | 30.0% | |
TAGGGTTTAAGTGATAAGTA+CGG | + | chr5.3:62063077-62063096 | MS.gene009566:intron | 30.0% | |
TCATGTCTGAATGTAAAACA+CGG | + | chr5.3:62063956-62063975 | MS.gene009566:CDS | 30.0% | |
TTAATTGAGAAGAACAAGTG+AGG | - | chr5.3:62064493-62064512 | None:intergenic | 30.0% | |
! | AATAATAGAACTGAGAGTGT+GGG | + | chr5.3:62064229-62064248 | MS.gene009566:CDS | 30.0% |
! | AATAGGCTTTTTGTAAGCAT+TGG | - | chr5.3:62063232-62063251 | None:intergenic | 30.0% |
! | ATAGGCTTTTTGTAAGCATT+GGG | - | chr5.3:62063231-62063250 | None:intergenic | 30.0% |
! | ATTTAAAGCCTAATCCAACT+CGG | + | chr5.3:62063143-62063162 | MS.gene009566:intron | 30.0% |
! | GAATAACTTATAGTGGAAAG+AGG | + | chr5.3:62063990-62064009 | MS.gene009566:CDS | 30.0% |
! | GATACTCCTTTCATATTTTG+AGG | + | chr5.3:62062658-62062677 | MS.gene009566:intron | 30.0% |
! | TCTCGAATCCAATTTTCATA+TGG | + | chr5.3:62064124-62064143 | MS.gene009566:CDS | 30.0% |
! | TGGTTATACATTTTACTGCA+TGG | + | chr5.3:62063707-62063726 | MS.gene009566:intron | 30.0% |
!! | AATATAGCCAATTTGGGTTT+TGG | - | chr5.3:62062233-62062252 | None:intergenic | 30.0% |
!! | AGTTGGATTAGGCTTTAAAT+AGG | - | chr5.3:62063143-62063162 | None:intergenic | 30.0% |
!! | ATTAGGCTTTAAATAGGTCA+TGG | - | chr5.3:62063137-62063156 | None:intergenic | 30.0% |
!! | TTCCGACAATTTTAAAGGTT+TGG | - | chr5.3:62063480-62063499 | None:intergenic | 30.0% |
!!! | CTGAATACTTATTTTACACG+AGG | - | chr5.3:62063451-62063470 | None:intergenic | 30.0% |
!!! | TGATTTGGTTTTTTAGTCGA+AGG | + | chr5.3:62063308-62063327 | MS.gene009566:intron | 30.0% |
AAACTTCAAGGTGACAAAGA+AGG | - | chr5.3:62064155-62064174 | None:intergenic | 35.0% | |
AACTTCAAGGTGACAAAGAA+GGG | - | chr5.3:62064154-62064173 | None:intergenic | 35.0% | |
AGCAAAGTCACAACCTAAAA+TGG | - | chr5.3:62064056-62064075 | None:intergenic | 35.0% | |
AGTAAAGGAGATACATACCT+TGG | - | chr5.3:62064467-62064486 | None:intergenic | 35.0% | |
ATTAAGGCCGTCAAATGATT+TGG | + | chr5.3:62063293-62063312 | MS.gene009566:intron | 35.0% | |
ATTCTTCAAGAGAACAGTGT+TGG | + | chr5.3:62064190-62064209 | MS.gene009566:CDS | 35.0% | |
CAAAGGCAAAAAAATCACCA+AGG | - | chr5.3:62062812-62062831 | None:intergenic | 35.0% | |
CAAAGTCACAACCTAAAATG+GGG | - | chr5.3:62064054-62064073 | None:intergenic | 35.0% | |
CATCTAGTTGCTTATTTCCA+AGG | - | chr5.3:62064807-62064826 | None:intergenic | 35.0% | |
GAACAAGTGAGGTAAAGTAA+AGG | - | chr5.3:62064482-62064501 | None:intergenic | 35.0% | |
GCAAAGTCACAACCTAAAAT+GGG | - | chr5.3:62064055-62064074 | None:intergenic | 35.0% | |
GCTGCAAATATAGCCAATTT+GGG | - | chr5.3:62062239-62062258 | None:intergenic | 35.0% | |
GGCTTCATCAATAAACTTCA+AGG | - | chr5.3:62064167-62064186 | None:intergenic | 35.0% | |
GTAAAGGAGATACATACCTT+GGG | - | chr5.3:62064466-62064485 | None:intergenic | 35.0% | |
GTTGCAATTCAGTGTGATAA+TGG | + | chr5.3:62063815-62063834 | MS.gene009566:intron | 35.0% | |
GTTTAAGTGATAAGTACGGA+CGG | + | chr5.3:62063081-62063100 | MS.gene009566:intron | 35.0% | |
TAAAGGAGATACATACCTTG+GGG | - | chr5.3:62064465-62064484 | None:intergenic | 35.0% | |
TAGAATGAGTGCAGAACATA+GGG | + | chr5.3:62063059-62063078 | MS.gene009566:intron | 35.0% | |
TGGAAAGATTATCCCTTTGA+AGG | + | chr5.3:62064699-62064718 | MS.gene009566:CDS | 35.0% | |
TGTTAGATAACTCACAACCT+TGG | + | chr5.3:62062792-62062811 | MS.gene009566:intron | 35.0% | |
TTCTTCAAGAGAACAGTGTT+GGG | + | chr5.3:62064191-62064210 | MS.gene009566:CDS | 35.0% | |
TTGGATGTCGTAATCATCAA+TGG | - | chr5.3:62064839-62064858 | None:intergenic | 35.0% | |
TTGGCACATTTATGTCTATG+TGG | - | chr5.3:62062126-62062145 | None:intergenic | 35.0% | |
! | AAAGATTATCCCTTTGAAGG+TGG | + | chr5.3:62064702-62064721 | MS.gene009566:CDS | 35.0% |
! | ACAAATTTTTGCTTTCACGC+TGG | - | chr5.3:62064746-62064765 | None:intergenic | 35.0% |
! | CTTTTACACCCCTATTGATA+CGG | + | chr5.3:62063605-62063624 | MS.gene009566:intron | 35.0% |
! | GAACTTTGCACTGGATTTTT+GGG | - | chr5.3:62064332-62064351 | None:intergenic | 35.0% |
! | GAGTTTCTAAAGAAACTCGT+TGG | - | chr5.3:62064375-62064394 | None:intergenic | 35.0% |
! | GCATATCCTTGTTATCAAAC+AGG | - | chr5.3:62063169-62063188 | None:intergenic | 35.0% |
! | GCATGTTCCGACAATTTTAA+AGG | - | chr5.3:62063485-62063504 | None:intergenic | 35.0% |
!! | CATGTTTAAGAGTATCGCAA+AGG | - | chr5.3:62062829-62062848 | None:intergenic | 35.0% |
!! | CTGTCATAGACTCGTTTTTA+AGG | - | chr5.3:62063507-62063526 | None:intergenic | 35.0% |
!! | GTTGAATTATTGGTGTTGCT+AGG | + | chr5.3:62063424-62063443 | MS.gene009566:intron | 35.0% |
AAAACTGTGGAACTTTGCAC+TGG | - | chr5.3:62064341-62064360 | None:intergenic | 40.0% | |
AAAGGAGATACATACCTTGG+GGG | - | chr5.3:62064464-62064483 | None:intergenic | 40.0% | |
AAGGGATAATCTTTCCAGTC+AGG | - | chr5.3:62064696-62064715 | None:intergenic | 40.0% | |
ACGAGTCTATGACAGACAAT+AGG | + | chr5.3:62063512-62063531 | MS.gene009566:intron | 40.0% | |
ACTGTGTATCTTTGCACAGT+TGG | - | chr5.3:62062094-62062113 | None:intergenic | 40.0% | |
ACTTCAAGGTGACAAAGAAG+GGG | - | chr5.3:62064153-62064172 | None:intergenic | 40.0% | |
AGAAATTTGCATAACCCCCA+AGG | + | chr5.3:62064447-62064466 | MS.gene009566:CDS | 40.0% | |
AGAAGACCTAATCACACCAA+CGG | - | chr5.3:62063334-62063353 | None:intergenic | 40.0% | |
AGGGATAATCTTTCCAGTCA+GGG | - | chr5.3:62064695-62064714 | None:intergenic | 40.0% | |
AGGGGCTACCATATGAAAAT+TGG | - | chr5.3:62064135-62064154 | None:intergenic | 40.0% | |
AGTGGTTGTCTTCATGATGA+GGG | - | chr5.3:62064891-62064910 | None:intergenic | 40.0% | |
ATCTTTGTACAAACCCTGAC+TGG | + | chr5.3:62064679-62064698 | MS.gene009566:CDS | 40.0% | |
CAATAGATTCTCAATGGCTC+TGG | - | chr5.3:62063921-62063940 | None:intergenic | 40.0% | |
CCTAAAATGGGGTAGTAACA+TGG | - | chr5.3:62064043-62064062 | None:intergenic | 40.0% | |
CCTTGTGCAAATGGCTAAAA+TGG | - | chr5.3:62064102-62064121 | None:intergenic | 40.0% | |
CGCTGCAAATATAGCCAATT+TGG | - | chr5.3:62062240-62062259 | None:intergenic | 40.0% | |
GAATGTAAAACACGGTTGCA+AGG | + | chr5.3:62063964-62063983 | MS.gene009566:CDS | 40.0% | |
GCAGTCAATATTAGCTGCAT+TGG | + | chr5.3:62064256-62064275 | MS.gene009566:CDS | 40.0% | |
GGACATTCTTCGAAAAACTG+TGG | - | chr5.3:62064354-62064373 | None:intergenic | 40.0% | |
GTAGAATGAGTGCAGAACAT+AGG | + | chr5.3:62063058-62063077 | MS.gene009566:intron | 40.0% | |
TGGCCTACTACAAAGACTAT+AGG | - | chr5.3:62063550-62063569 | None:intergenic | 40.0% | |
TGGCCTATAGTCTTTGTAGT+AGG | + | chr5.3:62063544-62063563 | MS.gene009566:intron | 40.0% | |
TGGTGTGATTAGGTCTTCTT+AGG | + | chr5.3:62063335-62063354 | MS.gene009566:intron | 40.0% | |
TGTCGTAATCATCAATGGTG+AGG | - | chr5.3:62064834-62064853 | None:intergenic | 40.0% | |
TTCCAAGGAACAGATAATGC+TGG | - | chr5.3:62064792-62064811 | None:intergenic | 40.0% | |
TTCGAGAATCCTTGTGCAAA+TGG | - | chr5.3:62064111-62064130 | None:intergenic | 40.0% | |
! | AATAGGGGTGTAAAAGGATC+AGG | - | chr5.3:62063601-62063620 | None:intergenic | 40.0% |
! | ATTTGTTCGATTCGATCCCA+TGG | + | chr5.3:62062717-62062736 | MS.gene009566:intron | 40.0% |
! | CCATGTTACTACCCCATTTT+AGG | + | chr5.3:62064040-62064059 | MS.gene009566:CDS | 40.0% |
! | CGTATCAATAGGGGTGTAAA+AGG | - | chr5.3:62063607-62063626 | None:intergenic | 40.0% |
! | CTACCTGCTGTTCTAAACAT+GGG | + | chr5.3:62063852-62063871 | MS.gene009566:CDS | 40.0% |
! | GACTTAGGCTTTATAAAGCC+TGG | + | chr5.3:62063570-62063589 | MS.gene009566:intron | 40.0% |
! | GGAACTTTGCACTGGATTTT+TGG | - | chr5.3:62064333-62064352 | None:intergenic | 40.0% |
! | GGCTTTATAAAGCCTAAGTC+TGG | - | chr5.3:62063570-62063589 | None:intergenic | 40.0% |
! | GGTAAAGGATGGACTTATCT+TGG | - | chr5.3:62064858-62064877 | None:intergenic | 40.0% |
! | TCTACCTGCTGTTCTAAACA+TGG | + | chr5.3:62063851-62063870 | MS.gene009566:CDS | 40.0% |
! | TTTGTTCGATTCGATCCCAT+GGG | + | chr5.3:62062718-62062737 | MS.gene009566:intron | 40.0% |
!! | CCATTTTAGCCATTTGCACA+AGG | + | chr5.3:62064099-62064118 | MS.gene009566:CDS | 40.0% |
!! | GTATGAGTATCGAGACACAT+AGG | - | chr5.3:62062757-62062776 | None:intergenic | 40.0% |
AAGTCCATCCTTTACCTCGT+CGG | + | chr5.3:62064862-62064881 | MS.gene009566:CDS | 45.0% | |
ACAGGGACCAAAACCCAAAT+TGG | + | chr5.3:62062223-62062242 | MS.gene009566:intron | 45.0% | |
ACATGCATACCTCGAACACA+GGG | - | chr5.3:62062587-62062606 | None:intergenic | 45.0% | |
AGAAGTCTCTTCACAGTCGT+TGG | - | chr5.3:62062499-62062518 | None:intergenic | 45.0% | |
ATGCAGCAATCAAACGCATG+AGG | - | chr5.3:62062543-62062562 | None:intergenic | 45.0% | |
CACCAGCATTATCTGTTCCT+TGG | + | chr5.3:62064787-62064806 | MS.gene009566:CDS | 45.0% | |
CGTAATCATCAATGGTGAGG+CGG | - | chr5.3:62064831-62064850 | None:intergenic | 45.0% | |
CTGAACTCTCCACCTTCAAA+GGG | - | chr5.3:62064714-62064733 | None:intergenic | 45.0% | |
CTTTGTAGTAGGCCAGACTT+AGG | + | chr5.3:62063555-62063574 | MS.gene009566:intron | 45.0% | |
GAAGGTGGAGAGTTCAGATA+CGG | + | chr5.3:62064717-62064736 | MS.gene009566:CDS | 45.0% | |
GAGTGGTTGTCTTCATGATG+AGG | - | chr5.3:62064892-62064911 | None:intergenic | 45.0% | |
GTATCGAGACACATAGGCTA+AGG | - | chr5.3:62062751-62062770 | None:intergenic | 45.0% | |
TAGCGTGGTTCAGAAGAGTT+GGG | - | chr5.3:62064286-62064305 | None:intergenic | 45.0% | |
TCTGAACTCTCCACCTTCAA+AGG | - | chr5.3:62064715-62064734 | None:intergenic | 45.0% | |
TGCAGCAATCAAACGCATGA+GGG | - | chr5.3:62062542-62062561 | None:intergenic | 45.0% | |
TGCCAACTCAGCAGTAAAGT+GGG | + | chr5.3:62062140-62062159 | MS.gene009566:intron | 45.0% | |
TGGTATGTGCCTGCATTACA+CGG | - | chr5.3:62062371-62062390 | None:intergenic | 45.0% | |
TGTTATCAAACAGGCCGAGT+TGG | - | chr5.3:62063160-62063179 | None:intergenic | 45.0% | |
! | ACTCGGCCTGTTTGATAACA+AGG | + | chr5.3:62063160-62063179 | MS.gene009566:intron | 45.0% |
! | AGGCTTTATAAAGCCTGGTC+CGG | + | chr5.3:62063575-62063594 | MS.gene009566:intron | 45.0% |
! | GTTCCCATGTTTAGAACAGC+AGG | - | chr5.3:62063858-62063877 | None:intergenic | 45.0% |
!! | AATGGCTCTGGATCGTTTCA+AGG | - | chr5.3:62063909-62063928 | None:intergenic | 45.0% |
!!! | GTTTTTTAGTCGAAGGCCGT+TGG | + | chr5.3:62063315-62063334 | MS.gene009566:intron | 45.0% |
!!! | AAATTTTTTGTTTTTTAAAA+AGG | - | chr5.3:62062174-62062193 | None:intergenic | 5.0% |
!!! | TATTTTTTGTTTTTAAAAAA+TGG | + | chr5.3:62062029-62062048 | MS.gene009566:intron | 5.0% |
AACATGCTGACCTCTCGTAG+AGG | + | chr5.3:62063105-62063124 | MS.gene009566:intron | 50.0% | |
AGGGAGAGCTCCGTATCAAT+AGG | - | chr5.3:62063618-62063637 | None:intergenic | 50.0% | |
CAGACAATAGGCTAGACTCG+TGG | + | chr5.3:62063524-62063543 | MS.gene009566:intron | 50.0% | |
CTCGAACACAGGGATAGTCA+AGG | - | chr5.3:62062577-62062596 | None:intergenic | 50.0% | |
CTTGACTATCCCTGTGTTCG+AGG | + | chr5.3:62062575-62062594 | MS.gene009566:CDS | 50.0% | |
GAAAACTTCAACGGCCGAGT+TGG | - | chr5.3:62063266-62063285 | None:intergenic | 50.0% | |
GACATGCATACCTCGAACAC+AGG | - | chr5.3:62062588-62062607 | None:intergenic | 50.0% | |
GCAATCAAACGCATGAGGGT+CGG | - | chr5.3:62062538-62062557 | None:intergenic | 50.0% | |
GCCAAATCACCGTGTAATGC+AGG | + | chr5.3:62062359-62062378 | MS.gene009566:intron | 50.0% | |
GCCAACTCAGCAGTAAAGTG+GGG | + | chr5.3:62062141-62062160 | MS.gene009566:intron | 50.0% | |
GCCTGCATTACACGGTGATT+TGG | - | chr5.3:62062363-62062382 | None:intergenic | 50.0% | |
GGAGAGCTCCGTATCAATAG+GGG | - | chr5.3:62063616-62063635 | None:intergenic | 50.0% | |
GGGAGAGCTCCGTATCAATA+GGG | - | chr5.3:62063617-62063636 | None:intergenic | 50.0% | |
GTAGCGTGGTTCAGAAGAGT+TGG | - | chr5.3:62064287-62064306 | None:intergenic | 50.0% | |
GTGCCAACTCAGCAGTAAAG+TGG | + | chr5.3:62062139-62062158 | MS.gene009566:intron | 50.0% | |
! | CAAACAGGCCGAGTTGGATT+AGG | - | chr5.3:62063154-62063173 | None:intergenic | 50.0% |
! | TTCAACGGCCGAGTTGGATT+AGG | - | chr5.3:62063260-62063279 | None:intergenic | 50.0% |
! | TTCGATTCGATCCCATGGGT+GGG | + | chr5.3:62062722-62062741 | MS.gene009566:intron | 50.0% |
CGAAGGCCGTTGGTGTGATT+AGG | + | chr5.3:62063325-62063344 | MS.gene009566:intron | 55.0% | |
CGTGGTTCAGAAGAGTTGGG+AGG | - | chr5.3:62064283-62064302 | None:intergenic | 55.0% | |
GCCCCACTTTACTGCTGAGT+TGG | - | chr5.3:62062145-62062164 | None:intergenic | 55.0% | |
GGGGTGTAAAAGGATCAGGC+CGG | - | chr5.3:62063597-62063616 | None:intergenic | 55.0% | |
GGTGGAGAGTTCAGATACGG+TGG | + | chr5.3:62064720-62064739 | MS.gene009566:CDS | 55.0% | |
TAAAAGGATCAGGCCGGACC+AGG | - | chr5.3:62063591-62063610 | None:intergenic | 55.0% | |
TCAGCAGTAAAGTGGGGCCA+AGG | + | chr5.3:62062147-62062166 | MS.gene009566:intron | 55.0% | |
TTGCACAGTTGGCAGCCATG+TGG | - | chr5.3:62062083-62062102 | None:intergenic | 55.0% | |
! | GTTCGATTCGATCCCATGGG+TGG | + | chr5.3:62062721-62062740 | MS.gene009566:intron | 55.0% |
AGGCTAAGGCTACCCACCCA+TGG | - | chr5.3:62062737-62062756 | None:intergenic | 60.0% | |
GGCTAAGGCTACCCACCCAT+GGG | - | chr5.3:62062736-62062755 | None:intergenic | 60.0% | |
GTCGCCGACGAGGTAAAGGA+TGG | - | chr5.3:62064869-62064888 | None:intergenic | 60.0% | |
!! | ATGGCGTCGACCTCTACGAG+AGG | - | chr5.3:62063118-62063137 | None:intergenic | 60.0% |
CATGATGAGGGTCGCCGACG+AGG | - | chr5.3:62064879-62064898 | None:intergenic | 65.0% | |
GAGGGTCGCCGACGAGGTAA+AGG | - | chr5.3:62064873-62064892 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 62061807 | 62064924 | 62061807 | ID=MS.gene009566 |
chr5.3 | mRNA | 62061807 | 62064924 | 62061807 | ID=MS.gene009566.t1;Parent=MS.gene009566 |
chr5.3 | exon | 62061807 | 62061809 | 62061807 | ID=MS.gene009566.t1.exon1;Parent=MS.gene009566.t1 |
chr5.3 | CDS | 62061807 | 62061809 | 62061807 | ID=cds.MS.gene009566.t1;Parent=MS.gene009566.t1 |
chr5.3 | exon | 62062468 | 62062596 | 62062468 | ID=MS.gene009566.t1.exon2;Parent=MS.gene009566.t1 |
chr5.3 | CDS | 62062468 | 62062596 | 62062468 | ID=cds.MS.gene009566.t1;Parent=MS.gene009566.t1 |
chr5.3 | exon | 62063827 | 62064468 | 62063827 | ID=MS.gene009566.t1.exon3;Parent=MS.gene009566.t1 |
chr5.3 | CDS | 62063827 | 62064468 | 62063827 | ID=cds.MS.gene009566.t1;Parent=MS.gene009566.t1 |
chr5.3 | exon | 62064673 | 62064924 | 62064673 | ID=MS.gene009566.t1.exon4;Parent=MS.gene009566.t1 |
chr5.3 | CDS | 62064673 | 62064924 | 62064673 | ID=cds.MS.gene009566.t1;Parent=MS.gene009566.t1 |
Gene Sequence |
Protein sequence |