AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064974


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064974.t1 MTR_1g046640 78.481 316 67 1 1 316 1 315 2.83e-177 493
MS.gene064974.t1 MTR_1g046650 77.215 316 71 1 1 316 1 315 1.29e-172 481
MS.gene064974.t1 MTR_1g046650 77.215 316 71 1 1 316 32 346 2.10e-172 481
MS.gene064974.t1 MTR_5g067400 77.316 313 69 2 1 312 1 312 5.64e-171 477
MS.gene064974.t1 MTR_1g046650 76.632 291 67 1 26 316 26 315 1.85e-155 437
MS.gene064974.t1 MTR_7g024290 71.338 314 87 3 1 312 1 313 1.55e-154 435
MS.gene064974.t1 MTR_5g076720 64.557 316 107 3 3 314 74 388 1.82e-137 395
MS.gene064974.t1 MTR_5g076660 67.532 308 95 3 4 307 26 332 1.99e-137 393
MS.gene064974.t1 MTR_5g076520 64.706 323 106 5 1 316 1 322 1.11e-134 385
MS.gene064974.t1 MTR_5g076370 64.013 314 107 4 4 312 26 338 6.52e-132 379
MS.gene064974.t1 MTR_5g076810 73.684 266 67 3 49 312 2 266 1.66e-131 375
MS.gene064974.t1 MTR_7g094390 63.725 306 109 2 3 307 164 468 6.90e-130 379
MS.gene064974.t1 MTR_2g038430 59.202 326 120 3 4 316 18 343 1.86e-129 372
MS.gene064974.t1 MTR_2g038420 59.748 318 123 3 4 316 18 335 4.77e-127 366
MS.gene064974.t1 MTR_1g046650 74.494 247 62 1 70 316 1 246 8.19e-127 362
MS.gene064974.t1 MTR_5g061290 59.375 320 120 5 4 316 11 327 2.68e-125 362
MS.gene064974.t1 MTR_5g076505 63.793 290 100 3 27 312 23 311 1.51e-120 349
MS.gene064974.t1 MTR_5g076820 67.384 279 83 6 1 274 10 285 1.26e-117 341
MS.gene064974.t1 MTR_5g076540 71.616 229 63 2 1 228 1 228 2.45e-106 310
MS.gene064974.t1 MTR_5g077020 63.959 197 56 6 53 239 17 208 1.16e-71 221
MS.gene064974.t1 MTR_4g094468 46.835 237 119 5 5 237 91 324 2.29e-61 198
MS.gene064974.t1 MTR_4g058025 68.992 129 37 3 68 194 1 128 1.45e-48 161
MS.gene064974.t1 MTR_7g085590 28.019 207 132 5 6 207 58 252 6.53e-22 94.0
MS.gene064974.t1 MTR_3g091510 30.476 210 134 6 11 209 60 268 3.90e-19 86.7
MS.gene064974.t1 MTR_8g027520 30.734 218 139 6 3 209 36 252 5.38e-19 85.9
MS.gene064974.t1 MTR_8g027520 30.734 218 139 6 3 209 45 261 6.75e-19 85.9
MS.gene064974.t1 MTR_7g117415 28.571 217 145 5 3 209 53 269 1.38e-18 85.1
MS.gene064974.t1 MTR_1g008120 36.090 133 81 3 11 139 68 200 3.13e-18 84.3
MS.gene064974.t1 MTR_7g093600 33.588 131 83 3 11 137 59 189 7.69e-17 80.1
MS.gene064974.t1 MTR_5g092700 55.556 72 32 0 241 312 1 72 9.16e-17 76.6
MS.gene064974.t1 MTR_4g073580 55.556 72 32 0 241 312 1 72 9.16e-17 76.6
MS.gene064974.t1 MTR_7g105080 55.556 72 32 0 241 312 1 72 1.51e-16 75.1
MS.gene064974.t1 MTR_3g092130 55.556 72 32 0 241 312 1 72 1.51e-16 75.1
MS.gene064974.t1 MTR_1g059690 55.556 72 32 0 241 312 1 72 1.51e-16 75.1
MS.gene064974.t1 MTR_8g038370 27.962 211 140 6 11 210 112 321 1.63e-16 79.7
MS.gene064974.t1 MTR_3g017590 32.624 141 88 4 11 147 53 190 1.68e-16 79.0
MS.gene064974.t1 MTR_1g054335 33.083 133 85 3 11 139 58 190 1.84e-16 79.0
MS.gene064974.t1 MTR_4g073580 55.556 72 32 0 241 312 1 72 2.03e-16 76.3
MS.gene064974.t1 MTR_8g088060 55.556 72 32 0 241 312 1 72 3.26e-16 75.1
MS.gene064974.t1 MTR_5g033960 55.556 72 32 0 241 312 1 72 3.53e-16 75.1
MS.gene064974.t1 MTR_7g116360 56.164 73 32 0 240 312 48 120 3.70e-16 77.4
MS.gene064974.t1 MTR_7g116360 55.556 72 32 0 241 312 125 196 1.42e-15 75.9
MS.gene064974.t1 MTR_7g116360 55.556 72 32 0 241 312 201 272 1.42e-15 75.9
MS.gene064974.t1 MTR_3g092130 55.556 72 32 0 241 312 1 72 3.79e-16 74.3
MS.gene064974.t1 MTR_1g066390 55.556 72 32 0 241 312 1 72 4.42e-16 76.6
MS.gene064974.t1 MTR_1g066390 55.556 72 32 0 241 312 77 148 4.42e-16 76.6
MS.gene064974.t1 MTR_1g066390 55.556 72 32 0 241 312 153 224 4.42e-16 76.6
MS.gene064974.t1 MTR_4g088485 55.556 72 32 0 241 312 1 72 4.61e-16 76.3
MS.gene064974.t1 MTR_4g088485 55.556 72 32 0 241 312 138 209 4.61e-16 76.3
MS.gene064974.t1 MTR_7g116360 55.556 72 32 0 241 312 1 72 4.85e-16 76.3
MS.gene064974.t1 MTR_7g116360 55.556 72 32 0 241 312 77 148 4.85e-16 76.3
MS.gene064974.t1 MTR_7g116360 55.556 72 32 0 241 312 153 224 4.85e-16 76.3
MS.gene064974.t1 MTR_5g076760 63.158 57 21 0 251 307 5 61 5.54e-16 72.4
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 1 72 9.15e-16 76.3
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 77 148 9.15e-16 76.3
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 153 224 9.15e-16 76.3
MS.gene064974.t1 MTR_6g061930 55.556 72 32 0 241 312 1 72 1.20e-15 76.3
MS.gene064974.t1 MTR_6g061930 55.556 72 32 0 241 312 77 148 1.20e-15 76.3
MS.gene064974.t1 MTR_6g061930 55.556 72 32 0 241 312 214 285 1.20e-15 76.3
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 1 72 1.21e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 77 148 1.21e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 153 224 1.21e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 229 300 1.21e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 1 72 1.82e-15 75.5
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 77 148 1.82e-15 75.5
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 153 224 1.82e-15 75.5
MS.gene064974.t1 MTR_4g080920 54.167 72 33 0 241 312 77 148 1.92e-15 74.7
MS.gene064974.t1 MTR_4g080920 54.167 72 33 0 241 312 1 72 3.68e-15 73.9
MS.gene064974.t1 MTR_8g081020 55.556 72 32 0 241 312 1 72 1.98e-15 76.6
MS.gene064974.t1 MTR_8g081020 55.556 72 32 0 241 312 77 148 1.98e-15 76.6
MS.gene064974.t1 MTR_8g081020 55.556 72 32 0 241 312 153 224 1.98e-15 76.6
MS.gene064974.t1 MTR_8g081020 55.556 72 32 0 241 312 229 300 1.98e-15 76.6
MS.gene064974.t1 MTR_8g081020 55.556 72 32 0 241 312 305 376 1.98e-15 76.6
MS.gene064974.t1 MTR_4g091580 55.556 72 32 0 241 312 1 72 2.02e-15 76.6
MS.gene064974.t1 MTR_4g091580 55.556 72 32 0 241 312 77 148 2.02e-15 76.6
MS.gene064974.t1 MTR_4g091580 55.556 72 32 0 241 312 153 224 2.02e-15 76.6
MS.gene064974.t1 MTR_4g091580 55.556 72 32 0 241 312 305 376 2.02e-15 76.6
MS.gene064974.t1 MTR_4g091580 54.167 72 33 0 241 312 229 300 6.36e-15 75.1
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 1 72 2.04e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 77 148 2.04e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 153 224 2.04e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 229 300 2.04e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 305 376 2.04e-15 76.6
MS.gene064974.t1 MTR_4g080797 55.556 72 32 0 241 312 1 72 2.08e-15 76.6
MS.gene064974.t1 MTR_4g080797 55.556 72 32 0 241 312 77 148 2.08e-15 76.6
MS.gene064974.t1 MTR_4g080797 55.556 72 32 0 241 312 153 224 2.08e-15 76.6
MS.gene064974.t1 MTR_4g080797 55.556 72 32 0 241 312 229 300 2.08e-15 76.6
MS.gene064974.t1 MTR_4g080797 55.556 72 32 0 241 312 305 376 2.08e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 1 72 2.08e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 77 148 2.08e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 153 224 2.08e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 229 300 2.08e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 305 376 2.08e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 1 72 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 77 148 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 153 224 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 229 300 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 305 376 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 381 452 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 1 72 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 77 148 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 153 224 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 229 300 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 305 376 2.64e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 381 452 2.64e-15 76.6
MS.gene064974.t1 MTR_4g091580 54.167 72 33 0 241 312 305 376 2.86e-15 76.6
MS.gene064974.t1 MTR_4g091580 55.556 72 32 0 241 312 1 72 2.89e-15 76.6
MS.gene064974.t1 MTR_4g091580 55.556 72 32 0 241 312 77 148 2.89e-15 76.6
MS.gene064974.t1 MTR_4g091580 55.556 72 32 0 241 312 153 224 2.89e-15 76.6
MS.gene064974.t1 MTR_4g091580 55.556 72 32 0 241 312 229 300 2.89e-15 76.6
MS.gene064974.t1 MTR_4g091580 55.556 72 32 0 241 312 381 452 2.89e-15 76.6
MS.gene064974.t1 MTR_4g091580 55.556 72 32 0 241 312 457 528 2.89e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 1 72 3.02e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 77 148 3.02e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 153 224 3.02e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 229 300 3.02e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 305 376 3.02e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 381 452 3.02e-15 76.6
MS.gene064974.t1 MTR_8g018230 55.556 72 32 0 241 312 457 528 3.02e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 1 72 3.05e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 77 148 3.05e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 153 224 3.05e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 229 300 3.05e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 305 376 3.05e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 381 452 3.05e-15 76.6
MS.gene064974.t1 MTR_4g081010 55.556 72 32 0 241 312 457 528 3.05e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 77 148 3.70e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 153 224 3.70e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 229 300 3.70e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 305 376 3.70e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 381 452 3.70e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 457 528 3.70e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 533 604 3.70e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 609 680 3.70e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 685 756 3.70e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 761 832 3.70e-15 76.6
MS.gene064974.t1 MTR_4g088495 55.556 72 32 0 241 312 1 72 4.17e-15 76.3
MS.gene064974.t1 MTR_5g076740 58.824 68 27 1 240 306 85 152 7.93e-15 71.6
MS.gene064974.t1 MTR_4g009980 51.515 66 32 0 247 312 2 67 1.67e-14 67.8
MS.gene064974.t1 MTR_5g061310 48.684 76 39 0 241 316 2 77 6.87e-14 66.2
MS.gene064974.t1 MTR_8g479250 52.439 82 39 0 231 312 131 212 6.92e-14 71.2
MS.gene064974.t1 MTR_5g076780 60.000 50 20 0 252 301 1 50 1.37e-12 62.4
MS.gene064974.t1 MTR_5g076350 52.941 68 31 1 241 307 8 75 1.55e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064974.t1 AT5G37930 37.349 249 149 5 4 247 103 349 9.76e-46 158
MS.gene064974.t1 AT5G37870 35.610 205 129 3 5 206 36 240 9.05e-38 135
MS.gene064974.t1 AT1G66620 33.898 236 145 4 11 237 41 274 1.32e-37 136
MS.gene064974.t1 AT5G37890 34.615 234 135 7 5 221 42 274 1.09e-34 128
MS.gene064974.t1 AT5G37910 32.174 230 136 5 11 221 35 263 4.59e-32 120
MS.gene064974.t1 AT1G66650 32.932 249 154 7 4 240 76 323 1.26e-31 120
MS.gene064974.t1 AT1G66660 32.308 260 140 8 2 238 94 340 3.75e-31 120
MS.gene064974.t1 AT1G66630 33.333 255 138 9 11 237 46 296 6.46e-31 118
MS.gene064974.t1 AT5G62800 36.559 186 112 4 11 190 40 225 5.14e-29 113
MS.gene064974.t1 AT5G62800 36.559 186 112 4 11 190 40 225 6.37e-29 114
MS.gene064974.t1 AT3G61790 34.752 141 88 3 3 139 52 192 2.82e-18 84.3
MS.gene064974.t1 AT4G27880 35.338 133 82 3 11 139 61 193 1.43e-17 82.4
MS.gene064974.t1 AT2G35635 55.556 72 32 0 241 312 1 72 1.04e-16 76.3
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 1 72 1.17e-16 76.3
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 77 148 1.17e-16 76.3
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 1 72 1.17e-16 76.3
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 77 148 1.17e-16 76.3
MS.gene064974.t1 AT1G31340 55.556 72 32 0 241 312 1 72 1.22e-16 76.3
MS.gene064974.t1 AT3G52590 55.556 72 32 0 241 312 1 72 1.70e-16 75.1
MS.gene064974.t1 AT2G36170 55.556 72 32 0 241 312 1 72 1.70e-16 75.1
MS.gene064974.t1 AT2G47110 55.556 72 32 0 241 312 1 72 2.11e-16 75.5
MS.gene064974.t1 AT2G47110 55.556 72 32 0 241 312 1 72 2.11e-16 75.5
MS.gene064974.t1 AT3G62250 55.556 72 32 0 241 312 1 72 2.16e-16 75.5
MS.gene064974.t1 AT1G23410 55.556 72 32 0 241 312 1 72 2.69e-16 75.5
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 1 72 5.08e-16 76.3
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 77 148 5.08e-16 76.3
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 153 224 5.08e-16 76.3
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 1 72 5.08e-16 76.3
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 77 148 5.08e-16 76.3
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 153 224 5.08e-16 76.3
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 1 72 5.08e-16 76.3
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 77 148 5.08e-16 76.3
MS.gene064974.t1 AT4G05050 55.556 72 32 0 241 312 153 224 5.08e-16 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 1 72 5.08e-16 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 77 148 5.08e-16 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 153 224 5.08e-16 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 1 72 5.08e-16 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 77 148 5.08e-16 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 153 224 5.08e-16 76.3
MS.gene064974.t1 AT2G41980 26.506 249 164 8 11 241 54 301 8.77e-16 77.0
MS.gene064974.t1 AT3G58040 32.331 133 86 3 11 139 57 189 1.20e-15 75.1
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 1 72 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 77 148 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 153 224 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 229 300 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 1 72 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 77 148 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 153 224 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 229 300 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 1 72 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 77 148 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 153 224 1.24e-15 76.6
MS.gene064974.t1 AT5G03240 55.556 72 32 0 241 312 229 300 1.24e-15 76.6
MS.gene064974.t1 AT5G20620 55.556 72 32 0 241 312 1 72 1.24e-15 76.6
MS.gene064974.t1 AT5G20620 55.556 72 32 0 241 312 77 148 1.24e-15 76.6
MS.gene064974.t1 AT5G20620 55.556 72 32 0 241 312 153 224 1.24e-15 76.6
MS.gene064974.t1 AT5G20620 55.556 72 32 0 241 312 229 300 1.24e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 1 72 1.32e-15 76.3
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 77 148 1.32e-15 76.3
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 153 224 1.32e-15 76.3
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 229 300 1.32e-15 76.3
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 1 72 1.32e-15 76.3
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 77 148 1.32e-15 76.3
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 153 224 1.32e-15 76.3
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 229 300 1.32e-15 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 1 72 1.32e-15 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 77 148 1.32e-15 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 153 224 1.32e-15 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 229 300 1.32e-15 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 1 72 1.32e-15 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 77 148 1.32e-15 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 153 224 1.32e-15 76.3
MS.gene064974.t1 AT4G02890 55.556 72 32 0 241 312 229 300 1.32e-15 76.3
MS.gene064974.t1 AT1G55060 54.167 72 33 0 241 312 77 148 1.69e-15 74.7
MS.gene064974.t1 AT1G55060 52.778 72 34 0 241 312 1 72 1.56e-14 72.0
MS.gene064974.t1 AT1G55060 52.778 72 34 0 241 312 153 224 1.14e-13 69.7
MS.gene064974.t1 AT1G65350 55.556 72 32 0 241 312 1 72 1.82e-15 76.3
MS.gene064974.t1 AT1G65350 55.556 72 32 0 241 312 152 223 5.81e-15 74.7
MS.gene064974.t1 AT1G65350 54.167 72 32 1 241 312 77 147 8.41e-13 68.6
MS.gene064974.t1 AT5G20620 55.556 72 32 0 241 312 1 72 2.11e-15 76.6
MS.gene064974.t1 AT5G20620 55.556 72 32 0 241 312 77 148 2.11e-15 76.6
MS.gene064974.t1 AT5G20620 55.556 72 32 0 241 312 153 224 2.11e-15 76.6
MS.gene064974.t1 AT5G20620 55.556 72 32 0 241 312 229 300 2.11e-15 76.6
MS.gene064974.t1 AT5G20620 55.556 72 32 0 241 312 305 376 2.11e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 1 72 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 77 148 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 153 224 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 229 300 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 305 376 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 1 72 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 77 148 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 153 224 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 229 300 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 305 376 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 1 72 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 77 148 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 153 224 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 229 300 2.18e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 305 376 2.18e-15 76.6
MS.gene064974.t1 AT3G58040 34.483 116 73 2 11 123 57 172 2.61e-15 75.5
MS.gene064974.t1 AT3G58040 34.483 116 73 2 11 123 57 172 2.61e-15 75.5
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 1 72 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 77 148 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 153 224 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 229 300 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 305 376 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 381 452 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 1 72 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 77 148 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 153 224 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 229 300 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 305 376 2.77e-15 76.6
MS.gene064974.t1 AT4G05320 55.556 72 32 0 241 312 381 452 2.77e-15 76.6
MS.gene064974.t1 AT5G37640 50.000 82 41 0 231 312 69 150 6.68e-15 74.7
MS.gene064974.t1 AT5G37640 51.389 72 35 0 241 312 155 226 3.90e-13 69.3
MS.gene064974.t1 AT5G37640 50.685 73 35 1 241 312 231 303 1.63e-11 64.7
MS.gene064974.t1 AT1G53930 51.389 72 35 0 241 312 86 157 1.83e-14 70.5
MS.gene064974.t1 AT1G66660 29.187 209 112 8 53 238 21 216 1.83e-14 72.0
MS.gene064974.t1 AT1G66610 52.381 63 30 0 11 73 53 115 4.95e-14 72.4
MS.gene064974.t1 AT1G66610 28.289 152 106 3 76 224 183 334 3.38e-12 67.0
MS.gene064974.t1 AT1G66610 52.381 63 30 0 11 73 53 115 1.06e-13 70.1
MS.gene064974.t1 AT1G66610 47.887 71 37 0 6 76 153 223 4.83e-13 68.2
MS.gene064974.t1 AT3G09790 50.000 72 36 0 241 312 552 623 1.10e-12 68.9
MS.gene064974.t1 AT3G09790 51.389 72 35 0 241 312 79 150 1.46e-12 68.6
MS.gene064974.t1 AT3G09790 50.000 72 36 0 241 312 3 74 5.04e-12 67.0
MS.gene064974.t1 AT3G09790 46.753 77 36 1 241 312 238 314 8.02e-12 66.2
MS.gene064974.t1 AT3G09790 50.000 72 36 0 241 312 552 623 1.10e-12 68.9
MS.gene064974.t1 AT3G09790 51.389 72 35 0 241 312 79 150 1.46e-12 68.6
MS.gene064974.t1 AT3G09790 50.000 72 36 0 241 312 3 74 5.04e-12 67.0
MS.gene064974.t1 AT3G09790 46.753 77 36 1 241 312 238 314 8.02e-12 66.2

Find 81 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAACTATTCCCATCTTTC+AGG 0.143964 1.4:+31228493 MS.gene064974:CDS
GGAGGTACAACTTTCCTTTA+TGG 0.197138 1.4:-31230577 None:intergenic
AGACATGAACATGGGGATTC+TGG 0.269176 1.4:+31229981 MS.gene064974:CDS
GAGGTACAACTTTCCTTTAT+GGG 0.330163 1.4:-31230576 None:intergenic
CTGAAAGATGGGAATAGTTA+AGG 0.340707 1.4:-31228492 None:intergenic
CGCCACAGACCAGCCATTGC+TGG 0.342437 1.4:-31230673 None:intergenic
TCGTCTGCCACCGCCACCTT+TGG 0.372646 1.4:+31230759 MS.gene064974:CDS
ATTGTTCTTCAAGGGGAAAA+AGG 0.372936 1.4:+31230062 MS.gene064974:CDS
GGTCCTAATTCTTCCGAGTC+CGG 0.373956 1.4:+31230155 MS.gene064974:CDS
TACCCGGACTCGGAAGAATT+AGG 0.383156 1.4:-31230158 None:intergenic
ACCAGCCATTGCTGGTGCAC+TGG 0.399473 1.4:-31230665 None:intergenic
GAGTTGCTTGTGATTCCATT+TGG 0.402141 1.4:+31230278 MS.gene064974:CDS
TTGCAGCAATCAAGCAAACT+AGG 0.409814 1.4:-31228458 None:intergenic
GGTTTCATCATTAGACTTCA+AGG 0.410456 1.4:-31230039 None:intergenic
CCCCATGTTCATGTCTGAAA+TGG 0.418427 1.4:-31229974 None:intergenic
CGGGTATAGTTATGATATAT+TGG 0.430781 1.4:+31230175 MS.gene064974:CDS
GATGAAACCATTGTTCTTCA+AGG 0.438126 1.4:+31230053 MS.gene064974:CDS
TGAAAGATGGGAATAGTTAA+GGG 0.442999 1.4:-31228491 None:intergenic
TGTTGTAGTCGGCAAGGGTC+AGG 0.451067 1.4:-31230715 None:intergenic
AGAAAATAAGATACACTGAT+AGG 0.453035 1.4:+31229865 MS.gene064974:CDS
GTCCTAATTCTTCCGAGTCC+GGG 0.459011 1.4:+31230156 MS.gene064974:CDS
GCAGTCAATCTTTGCTGCAT+TGG 0.459248 1.4:+31230134 MS.gene064974:CDS
GGAACTCGTTGGAAGTTCTT+CGG 0.462780 1.4:-31230236 None:intergenic
ATCTTCATAAAGTCCCATAA+AGG 0.465883 1.4:+31230563 MS.gene064974:CDS
TGAAATGCATACCTGAAAGA+TGG 0.465935 1.4:-31228504 None:intergenic
AATACCTTGCAGTGTGATAA+TGG 0.470796 1.4:+31229693 MS.gene064974:intron
GTTCCTGAGTTTAGTGCAGC+AGG 0.472050 1.4:-31229733 None:intergenic
CCAGCCATTGCTGGTGCACT+GGG 0.475042 1.4:-31230664 None:intergenic
ATGAAACCATTGTTCTTCAA+GGG 0.487345 1.4:+31230054 MS.gene064974:CDS
AGCAAAGTCACATCCTGAAA+GGG 0.487737 1.4:-31229928 None:intergenic
CTCGGATGTTGTAGTCGGCA+AGG 0.499897 1.4:-31230721 None:intergenic
CCCAGTGCACCAGCAATGGC+TGG 0.509192 1.4:+31230664 MS.gene064974:CDS
TGTCTGAACGCTCAACCCTC+AGG 0.509977 1.4:-31230598 None:intergenic
CGAAGATGGTTGACCCCTCT+CGG 0.520693 1.4:-31230739 None:intergenic
AGGGTCAGGTTGTCCTGTAG+TGG 0.524923 1.4:-31230701 None:intergenic
AGAGGGTCAGAGGAACCAAA+TGG 0.528144 1.4:-31230293 None:intergenic
GCAATCAAGCAAACTAGGGT+TGG 0.530572 1.4:-31228453 None:intergenic
GCAAAGTCACATCCTGAAAG+GGG 0.530762 1.4:-31229927 None:intergenic
GAAATGCATACCTGAAAGAT+GGG 0.530956 1.4:-31228503 None:intergenic
TCTAATTCCAAAGGTGGCGG+TGG 0.539115 1.4:-31230766 None:intergenic
CTGTGGCGCTAAGCCACTAC+AGG 0.540076 1.4:+31230688 MS.gene064974:CDS
CAGCAAAGTCACATCCTGAA+AGG 0.549420 1.4:-31229929 None:intergenic
GTGGCGGTGGCAGACGAAGA+TGG 0.550475 1.4:-31230753 None:intergenic
TCTGATGAAAGAGTAGCTAA+AGG 0.552581 1.4:-31230257 None:intergenic
ATATCCCAGTGCACCAGCAA+TGG 0.553195 1.4:+31230660 MS.gene064974:CDS
ATGCAAATATCTAGCTTGAG+AGG 0.554871 1.4:-31230311 None:intergenic
TCGGATGTTGTAGTCGGCAA+GGG 0.556014 1.4:-31230720 None:intergenic
ATGTGACTTTGCTGCATCAG+AGG 0.561657 1.4:+31229938 MS.gene064974:CDS
AGATCGCAATAGATTCTCAA+TGG 0.562783 1.4:-31229802 None:intergenic
CCCCTCTCGGATGTTGTAGT+CGG 0.565673 1.4:-31230726 None:intergenic
CAATATATCATAACTATACC+CGG 0.570840 1.4:-31230174 None:intergenic
TGCAGCAATCAAGCAAACTA+GGG 0.574861 1.4:-31228457 None:intergenic
ATCTAGCTTGAGAGGGTCAG+AGG 0.576385 1.4:-31230303 None:intergenic
TGAAACCATTGTTCTTCAAG+GGG 0.583182 1.4:+31230055 MS.gene064974:CDS
AAGGAAAGTTGTACCTCCTG+AGG 0.588179 1.4:+31230582 MS.gene064974:CDS
CACCAGCAATGGCTGGTCTG+TGG 0.597250 1.4:+31230671 MS.gene064974:CDS
TGGTGATAATCTAATTCCAA+AGG 0.599905 1.4:-31230775 None:intergenic
ATAGTTATGATATATTGGCT+AGG 0.603327 1.4:+31230180 MS.gene064974:CDS
TGCAAATATCTAGCTTGAGA+GGG 0.605717 1.4:-31230310 None:intergenic
GACCATTTCAGACATGAACA+TGG 0.605812 1.4:+31229972 MS.gene064974:CDS
GAATGCAAAACATGGTTGCA+AGG 0.607126 1.4:+31229842 MS.gene064974:CDS
ACCATTTCAGACATGAACAT+GGG 0.607412 1.4:+31229973 MS.gene064974:CDS
AGACTTCAAGGAGACAATGA+AGG 0.608582 1.4:-31230027 None:intergenic
GCCGACTACAACATCCGAGA+GGG 0.611255 1.4:+31230725 MS.gene064974:CDS
GAGTAGCTAAAGGAACTCGT+TGG 0.611343 1.4:-31230247 None:intergenic
GACAATGAAGGAGTGGCCAT+AGG 0.611353 1.4:-31230015 None:intergenic
ATCATAACTATACCCGGACT+CGG 0.613425 1.4:-31230168 None:intergenic
AGGAAAGTTGTACCTCCTGA+GGG 0.617887 1.4:+31230583 MS.gene064974:CDS
ATGTTCATGTCTGAAATGGT+CGG 0.618581 1.4:-31229970 None:intergenic
TAATCTAATTCCAAAGGTGG+CGG 0.621304 1.4:-31230769 None:intergenic
CTACCTGCTGCACTAAACTC+AGG 0.633163 1.4:+31229730 MS.gene064974:CDS
TGATAATCTAATTCCAAAGG+TGG 0.637981 1.4:-31230772 None:intergenic
TCAAGGAGACAATGAAGGAG+TGG 0.639097 1.4:-31230022 None:intergenic
CTAGGGTTGGAGATCATCAA+CGG 0.655898 1.4:-31228440 None:intergenic
CCATTTCAGACATGAACATG+GGG 0.669952 1.4:+31229974 MS.gene064974:CDS
CAAAGTCACATCCTGAAAGG+GGG 0.676119 1.4:-31229926 None:intergenic
CTGAACGCTCAACCCTCAGG+AGG 0.686466 1.4:-31230595 None:intergenic
TCATGTCCGAATGCAAAACA+TGG 0.686755 1.4:+31229834 MS.gene064974:CDS
GGAAATAGGAGGTACCTTGG+GGG 0.715093 1.4:-31230336 None:intergenic
CCGACTACAACATCCGAGAG+GGG 0.717881 1.4:+31230726 MS.gene064974:CDS
TGCCGACTACAACATCCGAG+AGG 0.737323 1.4:+31230724 MS.gene064974:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAGAATAAATGTTTAAA+CGG - chr1.4:31228838-31228857 None:intergenic 10.0%
!! AAAAATAGAATTATGCATTT+GGG + chr1.4:31230107-31230126 MS.gene064974:CDS 15.0%
!! AAAAGAATAAATGTTTAAAC+GGG - chr1.4:31228837-31228856 None:intergenic 15.0%
!! AAATTAAAGATGAATATTAG+AGG + chr1.4:31229164-31229183 MS.gene064974:intron 15.0%
!! AATAAAATAACAACTTTAAC+CGG - chr1.4:31230386-31230405 None:intergenic 15.0%
!! CACTATATTAAATAACTATT+GGG + chr1.4:31228706-31228725 MS.gene064974:intron 15.0%
!! TAAAAATAGAATTATGCATT+TGG + chr1.4:31230106-31230125 MS.gene064974:CDS 15.0%
!! TCACTATATTAAATAACTAT+TGG + chr1.4:31228705-31228724 MS.gene064974:intron 15.0%
!!! AAACACATGATAAATTTTTA+AGG + chr1.4:31228663-31228682 MS.gene064974:intron 15.0%
!!! CTTTATTTTATTCTAACAAA+TGG + chr1.4:31229634-31229653 MS.gene064974:intron 15.0%
!!! TTGATTTTAAAACTATTTCT+AGG - chr1.4:31228812-31228831 None:intergenic 15.0%
!! AAAGAATAAATGTTTAAACG+GGG - chr1.4:31228836-31228855 None:intergenic 20.0%
!! AAATCAACAAAGAAAATTTG+AGG - chr1.4:31230518-31230537 None:intergenic 20.0%
!! AATAAAAGTGATTCCTTAAA+TGG - chr1.4:31229423-31229442 None:intergenic 20.0%
!! ATAAAATAACAACTTTAACC+GGG - chr1.4:31230385-31230404 None:intergenic 20.0%
!! CTAAATATGAGTATTTAAGT+GGG - chr1.4:31229068-31229087 None:intergenic 20.0%
!! CTAATATAAAAACTTTGCAT+TGG - chr1.4:31229567-31229586 None:intergenic 20.0%
!! TAAATATGAGTATTTAAGTG+GGG - chr1.4:31229067-31229086 None:intergenic 20.0%
!!! AAGGAATCACTTTTATTTAT+TGG + chr1.4:31229426-31229445 MS.gene064974:intron 20.0%
!!! AGGAATCACTTTTATTTATT+GGG + chr1.4:31229427-31229446 MS.gene064974:intron 20.0%
! AAAAACTTTGCATTGGAAAT+TGG - chr1.4:31229560-31229579 None:intergenic 25.0%
! AAATATGAGTATTTAAGTGG+GGG - chr1.4:31229066-31229085 None:intergenic 25.0%
! AGAAAATAAGATACACTGAT+AGG + chr1.4:31229865-31229884 MS.gene064974:CDS 25.0%
! CAATATATCATAACTATACC+CGG - chr1.4:31230177-31230196 None:intergenic 25.0%
! CCACTTAAATACTCATATTT+AGG + chr1.4:31229066-31229085 MS.gene064974:intron 25.0%
! CCTAAATATGAGTATTTAAG+TGG - chr1.4:31229069-31229088 None:intergenic 25.0%
! GCATATATGACAACAAATTA+GGG - chr1.4:31228875-31228894 None:intergenic 25.0%
! TAAAATAACAACTTTAACCG+GGG - chr1.4:31230384-31230403 None:intergenic 25.0%
! TATTCTAACAAATGGTTCAA+AGG + chr1.4:31229642-31229661 MS.gene064974:intron 25.0%
! TGCATATATGACAACAAATT+AGG - chr1.4:31228876-31228895 None:intergenic 25.0%
!! AAAGTGAATTACTTGTTAAG+AGG - chr1.4:31229108-31229127 None:intergenic 25.0%
!! ATAGTTATGATATATTGGCT+AGG + chr1.4:31230180-31230199 MS.gene064974:CDS 25.0%
!! CTGTTAGTGTTTTCTATTTA+TGG + chr1.4:31230475-31230494 MS.gene064974:intron 25.0%
!! GAAGAAAAAGATTTTTGACA+AGG + chr1.4:31230634-31230653 MS.gene064974:CDS 25.0%
!!! AACTTATTTTCTAACTCTGA+AGG + chr1.4:31228547-31228566 MS.gene064974:intron 25.0%
!!! TGTCTTTTGTTATAAGAATC+TGG - chr1.4:31229255-31229274 None:intergenic 25.0%
!!! TTTAAAACTATTTCTAGGAC+CGG - chr1.4:31228807-31228826 None:intergenic 25.0%
AAAATAACAACTTTAACCGG+GGG - chr1.4:31230383-31230402 None:intergenic 30.0%
ATCTTCATAAAGTCCCATAA+AGG + chr1.4:31230563-31230582 MS.gene064974:CDS 30.0%
ATGAAACCATTGTTCTTCAA+GGG + chr1.4:31230054-31230073 MS.gene064974:CDS 30.0%
CGGGTATAGTTATGATATAT+TGG + chr1.4:31230175-31230194 MS.gene064974:CDS 30.0%
GTATGACAATGATGAATAAG+TGG + chr1.4:31229381-31229400 MS.gene064974:intron 30.0%
TGAAAGATGGGAATAGTTAA+GGG - chr1.4:31228494-31228513 None:intergenic 30.0%
TGATTCCTTAAATGGAATCA+CGG - chr1.4:31229415-31229434 None:intergenic 30.0%
!! CTCTAAAGCGAGAAAATTAA+AGG - chr1.4:31229229-31229248 None:intergenic 30.0%
!! CTTTAATTTTCTCGCTTTAG+AGG + chr1.4:31229227-31229246 MS.gene064974:intron 30.0%
!! GTTTTTCAAATGCCAAACAA+AGG + chr1.4:31230452-31230471 MS.gene064974:intron 30.0%
!! TCTGGAATCAAATTTTCCTA+TGG + chr1.4:31229999-31230018 MS.gene064974:CDS 30.0%
!! TTTTCTAACTCTGAAGGTTA+AGG + chr1.4:31228553-31228572 MS.gene064974:intron 30.0%
AAACACTAACAGCCTTTGTT+TGG - chr1.4:31230467-31230486 None:intergenic 35.0%
AAATAACAACTTTAACCGGG+GGG - chr1.4:31230382-31230401 None:intergenic 35.0%
AATACCTTGCAGTGTGATAA+TGG + chr1.4:31229693-31229712 MS.gene064974:intron 35.0%
ACCATTTCAGACATGAACAT+GGG + chr1.4:31229973-31229992 MS.gene064974:CDS 35.0%
ACTTAGGGAGAAACATAATG+AGG + chr1.4:31229354-31229373 MS.gene064974:intron 35.0%
AGATCGCAATAGATTCTCAA+TGG - chr1.4:31229805-31229824 None:intergenic 35.0%
AGTTAAGAGTCCTACATTTG+TGG - chr1.4:31228965-31228984 None:intergenic 35.0%
ATTGTTCTTCAAGGGGAAAA+AGG + chr1.4:31230062-31230081 MS.gene064974:CDS 35.0%
ATTTATTTAACTAGTGCCCC+CGG - chr1.4:31229608-31229627 None:intergenic 35.0%
CAAAGCATGGAAAAGGAAAT+AGG - chr1.4:31230353-31230372 None:intergenic 35.0%
CAAATTAGGGTGTGTTTGTT+CGG - chr1.4:31228862-31228881 None:intergenic 35.0%
CTGAAAGATGGGAATAGTTA+AGG - chr1.4:31228495-31228514 None:intergenic 35.0%
CTTAACTATTCCCATCTTTC+AGG + chr1.4:31228493-31228512 MS.gene064974:CDS 35.0%
GAAAAACCAAAGCATGGAAA+AGG - chr1.4:31230360-31230379 None:intergenic 35.0%
GAAATGCATACCTGAAAGAT+GGG - chr1.4:31228506-31228525 None:intergenic 35.0%
GAGGTACAACTTTCCTTTAT+GGG - chr1.4:31230579-31230598 None:intergenic 35.0%
GATATCCGTGATTCCATTTA+AGG + chr1.4:31229407-31229426 MS.gene064974:intron 35.0%
GATGAAACCATTGTTCTTCA+AGG + chr1.4:31230053-31230072 MS.gene064974:CDS 35.0%
GGTTTCATCATTAGACTTCA+AGG - chr1.4:31230042-31230061 None:intergenic 35.0%
TCTGATGAAAGAGTAGCTAA+AGG - chr1.4:31230260-31230279 None:intergenic 35.0%
TGAAACCATTGTTCTTCAAG+GGG + chr1.4:31230055-31230074 MS.gene064974:CDS 35.0%
TGAAATGCATACCTGAAAGA+TGG - chr1.4:31228507-31228526 None:intergenic 35.0%
TTGTAGGCAGCATAAAAGAA+TGG + chr1.4:31229303-31229322 MS.gene064974:intron 35.0%
! ATGCAAATATCTAGCTTGAG+AGG - chr1.4:31230314-31230333 None:intergenic 35.0%
! ATGTTCATGTCTGAAATGGT+CGG - chr1.4:31229973-31229992 None:intergenic 35.0%
! CTATTTCCTTTTCCATGCTT+TGG + chr1.4:31230351-31230370 MS.gene064974:intron 35.0%
! TGCAAATATCTAGCTTGAGA+GGG - chr1.4:31230313-31230332 None:intergenic 35.0%
! TTGCAACCATGTTTTGCATT+CGG - chr1.4:31229843-31229862 None:intergenic 35.0%
! TTTTTCCCCTTGAAGAACAA+TGG - chr1.4:31230063-31230082 None:intergenic 35.0%
AAAGCCACATAAGATGAGGA+GGG - chr1.4:31229285-31229304 None:intergenic 40.0%
AACTGAAATTGTTGTCCCCT+TGG - chr1.4:31228755-31228774 None:intergenic 40.0%
ACATCATGTCATCGCACTTA+AGG - chr1.4:31228914-31228933 None:intergenic 40.0%
AGACTTCAAGGAGACAATGA+AGG - chr1.4:31230030-31230049 None:intergenic 40.0%
AGATATTTGCATAACCCCCA+AGG + chr1.4:31230322-31230341 MS.gene064974:CDS 40.0%
AGCAAAGTCACATCCTGAAA+GGG - chr1.4:31229931-31229950 None:intergenic 40.0%
AGCATGGAAAAGGAAATAGG+AGG - chr1.4:31230350-31230369 None:intergenic 40.0%
AGTTGTGTTGTGGTTTACCA+AGG + chr1.4:31228735-31228754 MS.gene064974:intron 40.0%
ATCATAACTATACCCGGACT+CGG - chr1.4:31230171-31230190 None:intergenic 40.0%
ATGACCATTATCACACTGCA+AGG - chr1.4:31229700-31229719 None:intergenic 40.0%
CATCATGTCATCGCACTTAA+GGG - chr1.4:31228913-31228932 None:intergenic 40.0%
CCATTTCAGACATGAACATG+GGG + chr1.4:31229974-31229993 MS.gene064974:CDS 40.0%
CCCTATAGACACAACACTTA+GGG + chr1.4:31229339-31229358 MS.gene064974:intron 40.0%
CTACAAAGCCACATAAGATG+AGG - chr1.4:31229289-31229308 None:intergenic 40.0%
CTAGGACCGGAAAAAATCAA+GGG - chr1.4:31228794-31228813 None:intergenic 40.0%
GAATGCAAAACATGGTTGCA+AGG + chr1.4:31229842-31229861 MS.gene064974:CDS 40.0%
GACCATTTCAGACATGAACA+TGG + chr1.4:31229972-31229991 MS.gene064974:CDS 40.0%
GAGTTGCTTGTGATTCCATT+TGG + chr1.4:31230278-31230297 MS.gene064974:CDS 40.0%
GTTGTGTTGTGGTTTACCAA+GGG + chr1.4:31228736-31228755 MS.gene064974:intron 40.0%
TCATGTCCGAATGCAAAACA+TGG + chr1.4:31229834-31229853 MS.gene064974:CDS 40.0%
TCCAGATATCGAGTCTTCTT+GGG - chr1.4:31228993-31229012 None:intergenic 40.0%
TCCCTATAGACACAACACTT+AGG + chr1.4:31229338-31229357 MS.gene064974:intron 40.0%
TGCAGCAATCAAGCAAACTA+GGG - chr1.4:31228460-31228479 None:intergenic 40.0%
TTGCAGCAATCAAGCAAACT+AGG - chr1.4:31228461-31228480 None:intergenic 40.0%
TTGTGTCTATAGGGACAACT+TGG - chr1.4:31229333-31229352 None:intergenic 40.0%
TTGTGTTGTGGTTTACCAAG+GGG + chr1.4:31228737-31228756 MS.gene064974:intron 40.0%
! ATCGCACTTAAGGGCATATA+TGG - chr1.4:31228904-31228923 None:intergenic 40.0%
! CCCTAAGTGTTGTGTCTATA+GGG - chr1.4:31229342-31229361 None:intergenic 40.0%
! GGAGGTACAACTTTCCTTTA+TGG - chr1.4:31230580-31230599 None:intergenic 40.0%
! GTTTTTCTTAACCAGTGCTC+CGG + chr1.4:31229586-31229605 MS.gene064974:intron 40.0%
! TCCCTAAGTGTTGTGTCTAT+AGG - chr1.4:31229343-31229362 None:intergenic 40.0%
! TCTAGGACCGGAAAAAATCA+AGG - chr1.4:31228795-31228814 None:intergenic 40.0%
! TTTTCCCTCCTCATCTTATG+TGG + chr1.4:31229278-31229297 MS.gene064974:intron 40.0%
! TTTTTCTTAACCAGTGCTCC+GGG + chr1.4:31229587-31229606 MS.gene064974:intron 40.0%
!! AAAGGAAATAGGAGGTACCT+TGG - chr1.4:31230342-31230361 None:intergenic 40.0%
!! AAGGAAATAGGAGGTACCTT+GGG - chr1.4:31230341-31230360 None:intergenic 40.0%
!! CTCATCTTATGTGGCTTTGT+AGG + chr1.4:31229287-31229306 MS.gene064974:intron 40.0%
!!! CCATTGCCCTTGATTTTTTC+CGG + chr1.4:31228785-31228804 MS.gene064974:intron 40.0%
AAGGAAAGTTGTACCTCCTG+AGG + chr1.4:31230582-31230601 MS.gene064974:CDS 45.0%
AGACATGAACATGGGGATTC+TGG + chr1.4:31229981-31230000 MS.gene064974:CDS 45.0%
AGGAAAGTTGTACCTCCTGA+GGG + chr1.4:31230583-31230602 MS.gene064974:CDS 45.0%
ATGTGACTTTGCTGCATCAG+AGG + chr1.4:31229938-31229957 MS.gene064974:CDS 45.0%
CAAAGCCACATAAGATGAGG+AGG - chr1.4:31229286-31229305 None:intergenic 45.0%
CAAAGTCACATCCTGAAAGG+GGG - chr1.4:31229929-31229948 None:intergenic 45.0%
CAGCAAAGTCACATCCTGAA+AGG - chr1.4:31229932-31229951 None:intergenic 45.0%
CCAGATATCGAGTCTTCTTG+GGG - chr1.4:31228992-31229011 None:intergenic 45.0%
CCCCATGTTCATGTCTGAAA+TGG - chr1.4:31229977-31229996 None:intergenic 45.0%
CCGGAAAAAATCAAGGGCAA+TGG - chr1.4:31228788-31228807 None:intergenic 45.0%
CTAGGGTTGGAGATCATCAA+CGG - chr1.4:31228443-31228462 None:intergenic 45.0%
CTCCAGATATCGAGTCTTCT+TGG - chr1.4:31228994-31229013 None:intergenic 45.0%
GAGTAGCTAAAGGAACTCGT+TGG - chr1.4:31230250-31230269 None:intergenic 45.0%
GCAAAGTCACATCCTGAAAG+GGG - chr1.4:31229930-31229949 None:intergenic 45.0%
GCAATCAAGCAAACTAGGGT+TGG - chr1.4:31228456-31228475 None:intergenic 45.0%
GCAGTCAATCTTTGCTGCAT+TGG + chr1.4:31230134-31230153 MS.gene064974:CDS 45.0%
GGAACTCGTTGGAAGTTCTT+CGG - chr1.4:31230239-31230258 None:intergenic 45.0%
GTTCTTCAAGGGGAAAAAGG+TGG + chr1.4:31230065-31230084 MS.gene064974:CDS 45.0%
TCAAGGAGACAATGAAGGAG+TGG - chr1.4:31230025-31230044 None:intergenic 45.0%
TGACATGATGTGTCGTGGTT+TGG + chr1.4:31228923-31228942 MS.gene064974:intron 45.0%
TGGGACATGAAGTTGTGTTG+TGG + chr1.4:31228725-31228744 MS.gene064974:intron 45.0%
! TTTTCTTAACCAGTGCTCCG+GGG + chr1.4:31229588-31229607 MS.gene064974:intron 45.0%
!! AGGAAATAGGAGGTACCTTG+GGG - chr1.4:31230340-31230359 None:intergenic 45.0%
AGAGGGTCAGAGGAACCAAA+TGG - chr1.4:31230296-31230315 None:intergenic 50.0%
AGTGCCTCGGACACTAGTTA+AGG + chr1.4:31229461-31229480 MS.gene064974:intron 50.0%
ATATCCCAGTGCACCAGCAA+TGG + chr1.4:31230660-31230679 MS.gene064974:CDS 50.0%
CCCCAAGAAGACTCGATATC+TGG + chr1.4:31228989-31229008 MS.gene064974:intron 50.0%
CTACCTGCTGCACTAAACTC+AGG + chr1.4:31229730-31229749 MS.gene064974:CDS 50.0%
GACAATGAAGGAGTGGCCAT+AGG - chr1.4:31230018-31230037 None:intergenic 50.0%
GCTTCCTTAACTAGTGTCCG+AGG - chr1.4:31229468-31229487 None:intergenic 50.0%
GGCTGTAGCACCACAAATGT+AGG + chr1.4:31228952-31228971 MS.gene064974:intron 50.0%
GGTCATGTTAACCAGTGCCT+CGG + chr1.4:31229448-31229467 MS.gene064974:intron 50.0%
GGTCCTAATTCTTCCGAGTC+CGG + chr1.4:31230155-31230174 MS.gene064974:CDS 50.0%
GTCCTAATTCTTCCGAGTCC+GGG + chr1.4:31230156-31230175 MS.gene064974:CDS 50.0%
GTTCCTGAGTTTAGTGCAGC+AGG - chr1.4:31229736-31229755 None:intergenic 50.0%
TACCCGGACTCGGAAGAATT+AGG - chr1.4:31230161-31230180 None:intergenic 50.0%
TCGGATGTTGTAGTCGGCAA+GGG - chr1.4:31230723-31230742 None:intergenic 50.0%
TGCGATGACATGATGTGTCG+TGG + chr1.4:31228918-31228937 MS.gene064974:intron 50.0%
TTAACTAGTGTCCGAGGCAC+TGG - chr1.4:31229462-31229481 None:intergenic 50.0%
TTTCTTAACCAGTGCTCCGG+GGG + chr1.4:31229589-31229608 MS.gene064974:intron 50.0%
! ATCTAGCTTGAGAGGGTCAG+AGG - chr1.4:31230306-31230325 None:intergenic 50.0%
! TATCTGGAGCGTGATGTGAG+TGG + chr1.4:31229005-31229024 MS.gene064974:intron 50.0%
!! GGAAATAGGAGGTACCTTGG+GGG - chr1.4:31230339-31230358 None:intergenic 50.0%
!! TGTGTCGTGGTTTGGTAGTG+AGG + chr1.4:31228931-31228950 MS.gene064974:intron 50.0%
!!! CATGCTTTGGTTTTTCCCCC+CGG + chr1.4:31230364-31230383 MS.gene064974:intron 50.0%
CCATGTTACTGCCCCCTTTC+AGG + chr1.4:31229915-31229934 MS.gene064974:CDS 55.0%
CCCCTCTCGGATGTTGTAGT+CGG - chr1.4:31230729-31230748 None:intergenic 55.0%
CCGACTACAACATCCGAGAG+GGG + chr1.4:31230726-31230745 MS.gene064974:CDS 55.0%
CCTGAAAGGGGGCAGTAACA+TGG - chr1.4:31229918-31229937 None:intergenic 55.0%
CGAAGATGGTTGACCCCTCT+CGG - chr1.4:31230742-31230761 None:intergenic 55.0%
CGGGGGGAAAAACCAAAGCA+TGG - chr1.4:31230366-31230385 None:intergenic 55.0%
CTCGGATGTTGTAGTCGGCA+AGG - chr1.4:31230724-31230743 None:intergenic 55.0%
GCCGACTACAACATCCGAGA+GGG + chr1.4:31230725-31230744 MS.gene064974:CDS 55.0%
GGAGCGTGATGTGAGTGGTT+GGG + chr1.4:31229010-31229029 MS.gene064974:intron 55.0%
TGGAGCGTGATGTGAGTGGT+TGG + chr1.4:31229009-31229028 MS.gene064974:intron 55.0%
TGTCTGAACGCTCAACCCTC+AGG - chr1.4:31230601-31230620 None:intergenic 55.0%
TGTTGTAGTCGGCAAGGGTC+AGG - chr1.4:31230718-31230737 None:intergenic 55.0%
! AGGGTCAGGTTGTCCTGTAG+TGG - chr1.4:31230704-31230723 None:intergenic 55.0%
! TGCCGACTACAACATCCGAG+AGG + chr1.4:31230724-31230743 MS.gene064974:CDS 55.0%
ACCAGCCATTGCTGGTGCAC+TGG - chr1.4:31230668-31230687 None:intergenic 60.0%
CCAGCCATTGCTGGTGCACT+GGG - chr1.4:31230667-31230686 None:intergenic 60.0%
CTGAACGCTCAACCCTCAGG+AGG - chr1.4:31230598-31230617 None:intergenic 60.0%
CTGTGGCGCTAAGCCACTAC+AGG + chr1.4:31230688-31230707 MS.gene064974:CDS 60.0%
!! CACCAGCAATGGCTGGTCTG+TGG + chr1.4:31230671-31230690 MS.gene064974:CDS 60.0%
AACTAGTGCCCCCGGAGCAC+TGG - chr1.4:31229600-31229619 None:intergenic 65.0%
CCCAGTGCACCAGCAATGGC+TGG + chr1.4:31230664-31230683 MS.gene064974:CDS 65.0%
CGCCACAGACCAGCCATTGC+TGG - chr1.4:31230676-31230695 None:intergenic 65.0%
GTGGCGGTGGCAGACGAAGA+TGG - chr1.4:31230756-31230775 None:intergenic 65.0%
TCGTCTGCCACCGCCACCTT+TGG + chr1.4:31230759-31230778 MS.gene064974:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 31228434 31230787 31228434 ID=MS.gene064974
chr1.4 mRNA 31228434 31230787 31228434 ID=MS.gene064974.t1;Parent=MS.gene064974
chr1.4 exon 31228434 31228514 31228434 ID=MS.gene064974.t1.exon1;Parent=MS.gene064974.t1
chr1.4 CDS 31228434 31228514 31228434 ID=cds.MS.gene064974.t1;Parent=MS.gene064974.t1
chr1.4 exon 31229705 31230343 31229705 ID=MS.gene064974.t1.exon2;Parent=MS.gene064974.t1
chr1.4 CDS 31229705 31230343 31229705 ID=cds.MS.gene064974.t1;Parent=MS.gene064974.t1
chr1.4 exon 31230557 31230787 31230557 ID=MS.gene064974.t1.exon3;Parent=MS.gene064974.t1
chr1.4 CDS 31230557 31230787 31230557 ID=cds.MS.gene064974.t1;Parent=MS.gene064974.t1
Gene Sequence

>MS.gene064974

ATGGAGCCGTTGATGATCTCCAACCCTAGTTTGCTTGATTGCTGCAAATGTCTTCAACCCTTAACTATTCCCATCTTTCAGGTATGCATTTCATTCTTTTTATTTTCTTTCATAACTTATTTTCTAACTCTGAAGGTTAAGGTGAGTTTGATCTGTTAAAAGATAAATACAAGACAAAACAACAACGAAATCAAAACAACATATGATAATTTTTTTTCTTTGTTCAAAAAAACACATGATAAATTTTTAAGGTATTGAACAAAAAGTTATTTCACTATATTAAATAACTATTGGGACATGAAGTTGTGTTGTGGTTTACCAAGGGGACAACAATTTCAGTTTTTGTTAAGTCCATTGCCCTTGATTTTTTCCGGTCCTAGAAATAGTTTTAAAATCAAACCCCGTTTAAACATTTATTCTTTTAGCCGAACAAACACACCCTAATTTGTTGTCATATATGCAATATGCCATATATGCCCTTAAGTGCGATGACATGATGTGTCGTGGTTTGGTAGTGAGGCTGTAGCACCACAAATGTAGGACTCTTAACTCATGCCCCAAGAAGACTCGATATCTGGAGCGTGATGTGAGTGGTTGGGTAGACTTTGATACTATCTTTAGAATTTATGCCCCCACTTAAATACTCATATTTAGGCTTTATCTCATGTGAGCCTCTTAACAAGTAATTCACTTTAGAAGTTAAAGTAATTATTATTAAGCAATAATTAGAAAATTAAAGATGAATATTAGAGGTACATCAGAACAATCAAGAGTTTTTAATTAAGATAACGACCTTTAATTTTCTCGCTTTAGAGGAGCCAGATTCTTATAACAAAAGACATTATTTTCCCTCCTCATCTTATGTGGCTTTGTAGGCAGCATAAAAGAATGGAGAACCAAGTTGTCCCTATAGACACAACACTTAGGGAGAAACATAATGAGGTCTAGTATGACAATGATGAATAAGTGGTTAGATATCCGTGATTCCATTTAAGGAATCACTTTTATTTATTGGGTCATGTTAACCAGTGCCTCGGACACTAGTTAAGGAAGCAAAAATAAAATTTTTTCATAAAAAACAACAACATTTTGACTTTCATAAAGTTGAACATTCTACTTTTCACCAATTTCCAATGCAAAGTTTTTATATTAGTTTTTCTTAACCAGTGCTCCGGGGGCACTAGTTAAATAAATCTTTTACTTTATTTTATTCTAACAAATGGTTCAAAGGCTAATTTGATGATTTTCTTTTATGTTGCAATACCTTGCAGTGTGATAATGGTCATATTGTTTGCTCTACCTGCTGCACTAAACTCAGGAACAAGTGTCACGAGTGCTCATTGTGCATTAGCTCAAAACGTTGTAAAGCCATTGAGAATCTATTGCGATCTATCGAAATGTCATGTCCGAATGCAAAACATGGTTGCAAGGAGAAAATAAGATACACTGATAGGAAGCATGAAGAAGAATGCAACTACAGACCATGTTACTGCCCCCTTTCAGGATGTGACTTTGCTGCATCAGAGGAAGTTTTATCCGACCATTTCAGACATGAACATGGGGATTCTGGAATCAAATTTTCCTATGGCCACTCCTTCATTGTCTCCTTGAAGTCTAATGATGAAACCATTGTTCTTCAAGGGGAAAAAGGTGGTAAACTATTTATTCTCAATAAAAATAGAATTATGCATTTGGGAAATGCAGTCAATCTTTGCTGCATTGGTCCTAATTCTTCCGAGTCCGGGTATAGTTATGATATATTGGCTAGGTCTCAGATATGCAAACTGAAATTACATTCTTCTCCGAAGAACTTCCAACGAGTTCCTTTAGCTACTCTTTCATCAGAGTTGCTTGTGATTCCATTTGGTTCCTCTGACCCTCTCAAGCTAGATATTTGCATAACCCCCAAGGTACCTCCTATTTCCTTTTCCATGCTTTGGTTTTTCCCCCCGGTTAAAGTTGTTATTTTATTTTTTTATATTTTAAATTTTTACTCTAGCATTTTATCTTATTCTTCAGTTTTTCAAATGCCAAACAAAGGCTGTTAGTGTTTTCTATTTATGGATCAGTTCTTGAAAAATCCTCAAATTTTCTTTGTTGATTTAATTGCAATTGTTGTGCAGATGCAAATCTTCATAAAGTCCCATAAAGGAAAGTTGTACCTCCTGAGGGTTGAGCGTTCAGACACGATACTCAATGTGAAGAAAAAGATTTTTGACAAGGAAGATATCCCAGTGCACCAGCAATGGCTGGTCTGTGGCGCTAAGCCACTACAGGACAACCTGACCCTTGCCGACTACAACATCCGAGAGGGGTCAACCATCTTCGTCTGCCACCGCCACCTTTGGAATTAG

Protein sequence

>MS.gene064974.t1

MEPLMISNPSLLDCCKCLQPLTIPIFQCDNGHIVCSTCCTKLRNKCHECSLCISSKRCKAIENLLRSIEMSCPNAKHGCKEKIRYTDRKHEEECNYRPCYCPLSGCDFAASEEVLSDHFRHEHGDSGIKFSYGHSFIVSLKSNDETIVLQGEKGGKLFILNKNRIMHLGNAVNLCCIGPNSSESGYSYDILARSQICKLKLHSSPKNFQRVPLATLSSELLVIPFGSSDPLKLDICITPKMQIFIKSHKGKLYLLRVERSDTILNVKKKIFDKEDIPVHQQWLVCGAKPLQDNLTLADYNIREGSTIFVCHRHLWN