Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064974.t1 | KEH41205.1 | 78.5 | 316 | 67 | 1 | 1 | 316 | 1 | 315 | 4.10E-137 | 497.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064974.t1 | Q84K34 | 38.0 | 242 | 142 | 5 | 3 | 237 | 100 | 340 | 7.5e-39 | 162.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064974.t1 | A0A072VSV1 | 78.5 | 316 | 67 | 1 | 1 | 316 | 1 | 315 | 2.9e-137 | 497.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064974.t1 | MTR_1g046640 | 78.481 | 316 | 67 | 1 | 1 | 316 | 1 | 315 | 2.83e-177 | 493 |
MS.gene064974.t1 | MTR_1g046650 | 77.215 | 316 | 71 | 1 | 1 | 316 | 1 | 315 | 1.29e-172 | 481 |
MS.gene064974.t1 | MTR_1g046650 | 77.215 | 316 | 71 | 1 | 1 | 316 | 32 | 346 | 2.10e-172 | 481 |
MS.gene064974.t1 | MTR_5g067400 | 77.316 | 313 | 69 | 2 | 1 | 312 | 1 | 312 | 5.64e-171 | 477 |
MS.gene064974.t1 | MTR_1g046650 | 76.632 | 291 | 67 | 1 | 26 | 316 | 26 | 315 | 1.85e-155 | 437 |
MS.gene064974.t1 | MTR_7g024290 | 71.338 | 314 | 87 | 3 | 1 | 312 | 1 | 313 | 1.55e-154 | 435 |
MS.gene064974.t1 | MTR_5g076720 | 64.557 | 316 | 107 | 3 | 3 | 314 | 74 | 388 | 1.82e-137 | 395 |
MS.gene064974.t1 | MTR_5g076660 | 67.532 | 308 | 95 | 3 | 4 | 307 | 26 | 332 | 1.99e-137 | 393 |
MS.gene064974.t1 | MTR_5g076520 | 64.706 | 323 | 106 | 5 | 1 | 316 | 1 | 322 | 1.11e-134 | 385 |
MS.gene064974.t1 | MTR_5g076370 | 64.013 | 314 | 107 | 4 | 4 | 312 | 26 | 338 | 6.52e-132 | 379 |
MS.gene064974.t1 | MTR_5g076810 | 73.684 | 266 | 67 | 3 | 49 | 312 | 2 | 266 | 1.66e-131 | 375 |
MS.gene064974.t1 | MTR_7g094390 | 63.725 | 306 | 109 | 2 | 3 | 307 | 164 | 468 | 6.90e-130 | 379 |
MS.gene064974.t1 | MTR_2g038430 | 59.202 | 326 | 120 | 3 | 4 | 316 | 18 | 343 | 1.86e-129 | 372 |
MS.gene064974.t1 | MTR_2g038420 | 59.748 | 318 | 123 | 3 | 4 | 316 | 18 | 335 | 4.77e-127 | 366 |
MS.gene064974.t1 | MTR_1g046650 | 74.494 | 247 | 62 | 1 | 70 | 316 | 1 | 246 | 8.19e-127 | 362 |
MS.gene064974.t1 | MTR_5g061290 | 59.375 | 320 | 120 | 5 | 4 | 316 | 11 | 327 | 2.68e-125 | 362 |
MS.gene064974.t1 | MTR_5g076505 | 63.793 | 290 | 100 | 3 | 27 | 312 | 23 | 311 | 1.51e-120 | 349 |
MS.gene064974.t1 | MTR_5g076820 | 67.384 | 279 | 83 | 6 | 1 | 274 | 10 | 285 | 1.26e-117 | 341 |
MS.gene064974.t1 | MTR_5g076540 | 71.616 | 229 | 63 | 2 | 1 | 228 | 1 | 228 | 2.45e-106 | 310 |
MS.gene064974.t1 | MTR_5g077020 | 63.959 | 197 | 56 | 6 | 53 | 239 | 17 | 208 | 1.16e-71 | 221 |
MS.gene064974.t1 | MTR_4g094468 | 46.835 | 237 | 119 | 5 | 5 | 237 | 91 | 324 | 2.29e-61 | 198 |
MS.gene064974.t1 | MTR_4g058025 | 68.992 | 129 | 37 | 3 | 68 | 194 | 1 | 128 | 1.45e-48 | 161 |
MS.gene064974.t1 | MTR_7g085590 | 28.019 | 207 | 132 | 5 | 6 | 207 | 58 | 252 | 6.53e-22 | 94.0 |
MS.gene064974.t1 | MTR_3g091510 | 30.476 | 210 | 134 | 6 | 11 | 209 | 60 | 268 | 3.90e-19 | 86.7 |
MS.gene064974.t1 | MTR_8g027520 | 30.734 | 218 | 139 | 6 | 3 | 209 | 36 | 252 | 5.38e-19 | 85.9 |
MS.gene064974.t1 | MTR_8g027520 | 30.734 | 218 | 139 | 6 | 3 | 209 | 45 | 261 | 6.75e-19 | 85.9 |
MS.gene064974.t1 | MTR_7g117415 | 28.571 | 217 | 145 | 5 | 3 | 209 | 53 | 269 | 1.38e-18 | 85.1 |
MS.gene064974.t1 | MTR_1g008120 | 36.090 | 133 | 81 | 3 | 11 | 139 | 68 | 200 | 3.13e-18 | 84.3 |
MS.gene064974.t1 | MTR_7g093600 | 33.588 | 131 | 83 | 3 | 11 | 137 | 59 | 189 | 7.69e-17 | 80.1 |
MS.gene064974.t1 | MTR_5g092700 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 9.16e-17 | 76.6 |
MS.gene064974.t1 | MTR_4g073580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 9.16e-17 | 76.6 |
MS.gene064974.t1 | MTR_7g105080 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.51e-16 | 75.1 |
MS.gene064974.t1 | MTR_3g092130 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.51e-16 | 75.1 |
MS.gene064974.t1 | MTR_1g059690 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.51e-16 | 75.1 |
MS.gene064974.t1 | MTR_8g038370 | 27.962 | 211 | 140 | 6 | 11 | 210 | 112 | 321 | 1.63e-16 | 79.7 |
MS.gene064974.t1 | MTR_3g017590 | 32.624 | 141 | 88 | 4 | 11 | 147 | 53 | 190 | 1.68e-16 | 79.0 |
MS.gene064974.t1 | MTR_1g054335 | 33.083 | 133 | 85 | 3 | 11 | 139 | 58 | 190 | 1.84e-16 | 79.0 |
MS.gene064974.t1 | MTR_4g073580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.03e-16 | 76.3 |
MS.gene064974.t1 | MTR_8g088060 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.26e-16 | 75.1 |
MS.gene064974.t1 | MTR_5g033960 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.53e-16 | 75.1 |
MS.gene064974.t1 | MTR_7g116360 | 56.164 | 73 | 32 | 0 | 240 | 312 | 48 | 120 | 3.70e-16 | 77.4 |
MS.gene064974.t1 | MTR_7g116360 | 55.556 | 72 | 32 | 0 | 241 | 312 | 125 | 196 | 1.42e-15 | 75.9 |
MS.gene064974.t1 | MTR_7g116360 | 55.556 | 72 | 32 | 0 | 241 | 312 | 201 | 272 | 1.42e-15 | 75.9 |
MS.gene064974.t1 | MTR_3g092130 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.79e-16 | 74.3 |
MS.gene064974.t1 | MTR_1g066390 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.42e-16 | 76.6 |
MS.gene064974.t1 | MTR_1g066390 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 4.42e-16 | 76.6 |
MS.gene064974.t1 | MTR_1g066390 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 4.42e-16 | 76.6 |
MS.gene064974.t1 | MTR_4g088485 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.61e-16 | 76.3 |
MS.gene064974.t1 | MTR_4g088485 | 55.556 | 72 | 32 | 0 | 241 | 312 | 138 | 209 | 4.61e-16 | 76.3 |
MS.gene064974.t1 | MTR_7g116360 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.85e-16 | 76.3 |
MS.gene064974.t1 | MTR_7g116360 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 4.85e-16 | 76.3 |
MS.gene064974.t1 | MTR_7g116360 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 4.85e-16 | 76.3 |
MS.gene064974.t1 | MTR_5g076760 | 63.158 | 57 | 21 | 0 | 251 | 307 | 5 | 61 | 5.54e-16 | 72.4 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 9.15e-16 | 76.3 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 9.15e-16 | 76.3 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 9.15e-16 | 76.3 |
MS.gene064974.t1 | MTR_6g061930 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.20e-15 | 76.3 |
MS.gene064974.t1 | MTR_6g061930 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.20e-15 | 76.3 |
MS.gene064974.t1 | MTR_6g061930 | 55.556 | 72 | 32 | 0 | 241 | 312 | 214 | 285 | 1.20e-15 | 76.3 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.21e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.21e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.21e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.21e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.82e-15 | 75.5 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.82e-15 | 75.5 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.82e-15 | 75.5 |
MS.gene064974.t1 | MTR_4g080920 | 54.167 | 72 | 33 | 0 | 241 | 312 | 77 | 148 | 1.92e-15 | 74.7 |
MS.gene064974.t1 | MTR_4g080920 | 54.167 | 72 | 33 | 0 | 241 | 312 | 1 | 72 | 3.68e-15 | 73.9 |
MS.gene064974.t1 | MTR_8g081020 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.98e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g081020 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.98e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g081020 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.98e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g081020 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.98e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g081020 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 1.98e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 54.167 | 72 | 33 | 0 | 241 | 312 | 229 | 300 | 6.36e-15 | 75.1 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.04e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.04e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.04e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.04e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.04e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g080797 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.08e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g080797 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.08e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g080797 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.08e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g080797 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.08e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g080797 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.08e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.08e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.08e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.08e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.08e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.08e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 2.64e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 54.167 | 72 | 33 | 0 | 241 | 312 | 305 | 376 | 2.86e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.89e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.89e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.89e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.89e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 2.89e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g091580 | 55.556 | 72 | 32 | 0 | 241 | 312 | 457 | 528 | 2.89e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 3.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 3.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 3.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 3.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 3.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_8g018230 | 55.556 | 72 | 32 | 0 | 241 | 312 | 457 | 528 | 3.02e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 3.05e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 3.05e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 3.05e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 3.05e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 3.05e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 3.05e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g081010 | 55.556 | 72 | 32 | 0 | 241 | 312 | 457 | 528 | 3.05e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 3.70e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 3.70e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 3.70e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 3.70e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 3.70e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 457 | 528 | 3.70e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 533 | 604 | 3.70e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 609 | 680 | 3.70e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 685 | 756 | 3.70e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 761 | 832 | 3.70e-15 | 76.6 |
MS.gene064974.t1 | MTR_4g088495 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 4.17e-15 | 76.3 |
MS.gene064974.t1 | MTR_5g076740 | 58.824 | 68 | 27 | 1 | 240 | 306 | 85 | 152 | 7.93e-15 | 71.6 |
MS.gene064974.t1 | MTR_4g009980 | 51.515 | 66 | 32 | 0 | 247 | 312 | 2 | 67 | 1.67e-14 | 67.8 |
MS.gene064974.t1 | MTR_5g061310 | 48.684 | 76 | 39 | 0 | 241 | 316 | 2 | 77 | 6.87e-14 | 66.2 |
MS.gene064974.t1 | MTR_8g479250 | 52.439 | 82 | 39 | 0 | 231 | 312 | 131 | 212 | 6.92e-14 | 71.2 |
MS.gene064974.t1 | MTR_5g076780 | 60.000 | 50 | 20 | 0 | 252 | 301 | 1 | 50 | 1.37e-12 | 62.4 |
MS.gene064974.t1 | MTR_5g076350 | 52.941 | 68 | 31 | 1 | 241 | 307 | 8 | 75 | 1.55e-12 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064974.t1 | AT5G37930 | 37.349 | 249 | 149 | 5 | 4 | 247 | 103 | 349 | 9.76e-46 | 158 |
MS.gene064974.t1 | AT5G37870 | 35.610 | 205 | 129 | 3 | 5 | 206 | 36 | 240 | 9.05e-38 | 135 |
MS.gene064974.t1 | AT1G66620 | 33.898 | 236 | 145 | 4 | 11 | 237 | 41 | 274 | 1.32e-37 | 136 |
MS.gene064974.t1 | AT5G37890 | 34.615 | 234 | 135 | 7 | 5 | 221 | 42 | 274 | 1.09e-34 | 128 |
MS.gene064974.t1 | AT5G37910 | 32.174 | 230 | 136 | 5 | 11 | 221 | 35 | 263 | 4.59e-32 | 120 |
MS.gene064974.t1 | AT1G66650 | 32.932 | 249 | 154 | 7 | 4 | 240 | 76 | 323 | 1.26e-31 | 120 |
MS.gene064974.t1 | AT1G66660 | 32.308 | 260 | 140 | 8 | 2 | 238 | 94 | 340 | 3.75e-31 | 120 |
MS.gene064974.t1 | AT1G66630 | 33.333 | 255 | 138 | 9 | 11 | 237 | 46 | 296 | 6.46e-31 | 118 |
MS.gene064974.t1 | AT5G62800 | 36.559 | 186 | 112 | 4 | 11 | 190 | 40 | 225 | 5.14e-29 | 113 |
MS.gene064974.t1 | AT5G62800 | 36.559 | 186 | 112 | 4 | 11 | 190 | 40 | 225 | 6.37e-29 | 114 |
MS.gene064974.t1 | AT3G61790 | 34.752 | 141 | 88 | 3 | 3 | 139 | 52 | 192 | 2.82e-18 | 84.3 |
MS.gene064974.t1 | AT4G27880 | 35.338 | 133 | 82 | 3 | 11 | 139 | 61 | 193 | 1.43e-17 | 82.4 |
MS.gene064974.t1 | AT2G35635 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.04e-16 | 76.3 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.17e-16 | 76.3 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.17e-16 | 76.3 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.17e-16 | 76.3 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.17e-16 | 76.3 |
MS.gene064974.t1 | AT1G31340 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.22e-16 | 76.3 |
MS.gene064974.t1 | AT3G52590 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.70e-16 | 75.1 |
MS.gene064974.t1 | AT2G36170 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.70e-16 | 75.1 |
MS.gene064974.t1 | AT2G47110 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.11e-16 | 75.5 |
MS.gene064974.t1 | AT2G47110 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.11e-16 | 75.5 |
MS.gene064974.t1 | AT3G62250 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.16e-16 | 75.5 |
MS.gene064974.t1 | AT1G23410 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.69e-16 | 75.5 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G05050 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 5.08e-16 | 76.3 |
MS.gene064974.t1 | AT2G41980 | 26.506 | 249 | 164 | 8 | 11 | 241 | 54 | 301 | 8.77e-16 | 77.0 |
MS.gene064974.t1 | AT3G58040 | 32.331 | 133 | 86 | 3 | 11 | 139 | 57 | 189 | 1.20e-15 | 75.1 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G03240 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.24e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT4G02890 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 1.32e-15 | 76.3 |
MS.gene064974.t1 | AT1G55060 | 54.167 | 72 | 33 | 0 | 241 | 312 | 77 | 148 | 1.69e-15 | 74.7 |
MS.gene064974.t1 | AT1G55060 | 52.778 | 72 | 34 | 0 | 241 | 312 | 1 | 72 | 1.56e-14 | 72.0 |
MS.gene064974.t1 | AT1G55060 | 52.778 | 72 | 34 | 0 | 241 | 312 | 153 | 224 | 1.14e-13 | 69.7 |
MS.gene064974.t1 | AT1G65350 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 1.82e-15 | 76.3 |
MS.gene064974.t1 | AT1G65350 | 55.556 | 72 | 32 | 0 | 241 | 312 | 152 | 223 | 5.81e-15 | 74.7 |
MS.gene064974.t1 | AT1G65350 | 54.167 | 72 | 32 | 1 | 241 | 312 | 77 | 147 | 8.41e-13 | 68.6 |
MS.gene064974.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.11e-15 | 76.6 |
MS.gene064974.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.11e-15 | 76.6 |
MS.gene064974.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.11e-15 | 76.6 |
MS.gene064974.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.11e-15 | 76.6 |
MS.gene064974.t1 | AT5G20620 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.11e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.18e-15 | 76.6 |
MS.gene064974.t1 | AT3G58040 | 34.483 | 116 | 73 | 2 | 11 | 123 | 57 | 172 | 2.61e-15 | 75.5 |
MS.gene064974.t1 | AT3G58040 | 34.483 | 116 | 73 | 2 | 11 | 123 | 57 | 172 | 2.61e-15 | 75.5 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 1 | 72 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 77 | 148 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 153 | 224 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 229 | 300 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 305 | 376 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT4G05320 | 55.556 | 72 | 32 | 0 | 241 | 312 | 381 | 452 | 2.77e-15 | 76.6 |
MS.gene064974.t1 | AT5G37640 | 50.000 | 82 | 41 | 0 | 231 | 312 | 69 | 150 | 6.68e-15 | 74.7 |
MS.gene064974.t1 | AT5G37640 | 51.389 | 72 | 35 | 0 | 241 | 312 | 155 | 226 | 3.90e-13 | 69.3 |
MS.gene064974.t1 | AT5G37640 | 50.685 | 73 | 35 | 1 | 241 | 312 | 231 | 303 | 1.63e-11 | 64.7 |
MS.gene064974.t1 | AT1G53930 | 51.389 | 72 | 35 | 0 | 241 | 312 | 86 | 157 | 1.83e-14 | 70.5 |
MS.gene064974.t1 | AT1G66660 | 29.187 | 209 | 112 | 8 | 53 | 238 | 21 | 216 | 1.83e-14 | 72.0 |
MS.gene064974.t1 | AT1G66610 | 52.381 | 63 | 30 | 0 | 11 | 73 | 53 | 115 | 4.95e-14 | 72.4 |
MS.gene064974.t1 | AT1G66610 | 28.289 | 152 | 106 | 3 | 76 | 224 | 183 | 334 | 3.38e-12 | 67.0 |
MS.gene064974.t1 | AT1G66610 | 52.381 | 63 | 30 | 0 | 11 | 73 | 53 | 115 | 1.06e-13 | 70.1 |
MS.gene064974.t1 | AT1G66610 | 47.887 | 71 | 37 | 0 | 6 | 76 | 153 | 223 | 4.83e-13 | 68.2 |
MS.gene064974.t1 | AT3G09790 | 50.000 | 72 | 36 | 0 | 241 | 312 | 552 | 623 | 1.10e-12 | 68.9 |
MS.gene064974.t1 | AT3G09790 | 51.389 | 72 | 35 | 0 | 241 | 312 | 79 | 150 | 1.46e-12 | 68.6 |
MS.gene064974.t1 | AT3G09790 | 50.000 | 72 | 36 | 0 | 241 | 312 | 3 | 74 | 5.04e-12 | 67.0 |
MS.gene064974.t1 | AT3G09790 | 46.753 | 77 | 36 | 1 | 241 | 312 | 238 | 314 | 8.02e-12 | 66.2 |
MS.gene064974.t1 | AT3G09790 | 50.000 | 72 | 36 | 0 | 241 | 312 | 552 | 623 | 1.10e-12 | 68.9 |
MS.gene064974.t1 | AT3G09790 | 51.389 | 72 | 35 | 0 | 241 | 312 | 79 | 150 | 1.46e-12 | 68.6 |
MS.gene064974.t1 | AT3G09790 | 50.000 | 72 | 36 | 0 | 241 | 312 | 3 | 74 | 5.04e-12 | 67.0 |
MS.gene064974.t1 | AT3G09790 | 46.753 | 77 | 36 | 1 | 241 | 312 | 238 | 314 | 8.02e-12 | 66.2 |
Find 81 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAACTATTCCCATCTTTC+AGG | 0.143964 | 1.4:+31228493 | MS.gene064974:CDS |
GGAGGTACAACTTTCCTTTA+TGG | 0.197138 | 1.4:-31230577 | None:intergenic |
AGACATGAACATGGGGATTC+TGG | 0.269176 | 1.4:+31229981 | MS.gene064974:CDS |
GAGGTACAACTTTCCTTTAT+GGG | 0.330163 | 1.4:-31230576 | None:intergenic |
CTGAAAGATGGGAATAGTTA+AGG | 0.340707 | 1.4:-31228492 | None:intergenic |
CGCCACAGACCAGCCATTGC+TGG | 0.342437 | 1.4:-31230673 | None:intergenic |
TCGTCTGCCACCGCCACCTT+TGG | 0.372646 | 1.4:+31230759 | MS.gene064974:CDS |
ATTGTTCTTCAAGGGGAAAA+AGG | 0.372936 | 1.4:+31230062 | MS.gene064974:CDS |
GGTCCTAATTCTTCCGAGTC+CGG | 0.373956 | 1.4:+31230155 | MS.gene064974:CDS |
TACCCGGACTCGGAAGAATT+AGG | 0.383156 | 1.4:-31230158 | None:intergenic |
ACCAGCCATTGCTGGTGCAC+TGG | 0.399473 | 1.4:-31230665 | None:intergenic |
GAGTTGCTTGTGATTCCATT+TGG | 0.402141 | 1.4:+31230278 | MS.gene064974:CDS |
TTGCAGCAATCAAGCAAACT+AGG | 0.409814 | 1.4:-31228458 | None:intergenic |
GGTTTCATCATTAGACTTCA+AGG | 0.410456 | 1.4:-31230039 | None:intergenic |
CCCCATGTTCATGTCTGAAA+TGG | 0.418427 | 1.4:-31229974 | None:intergenic |
CGGGTATAGTTATGATATAT+TGG | 0.430781 | 1.4:+31230175 | MS.gene064974:CDS |
GATGAAACCATTGTTCTTCA+AGG | 0.438126 | 1.4:+31230053 | MS.gene064974:CDS |
TGAAAGATGGGAATAGTTAA+GGG | 0.442999 | 1.4:-31228491 | None:intergenic |
TGTTGTAGTCGGCAAGGGTC+AGG | 0.451067 | 1.4:-31230715 | None:intergenic |
AGAAAATAAGATACACTGAT+AGG | 0.453035 | 1.4:+31229865 | MS.gene064974:CDS |
GTCCTAATTCTTCCGAGTCC+GGG | 0.459011 | 1.4:+31230156 | MS.gene064974:CDS |
GCAGTCAATCTTTGCTGCAT+TGG | 0.459248 | 1.4:+31230134 | MS.gene064974:CDS |
GGAACTCGTTGGAAGTTCTT+CGG | 0.462780 | 1.4:-31230236 | None:intergenic |
ATCTTCATAAAGTCCCATAA+AGG | 0.465883 | 1.4:+31230563 | MS.gene064974:CDS |
TGAAATGCATACCTGAAAGA+TGG | 0.465935 | 1.4:-31228504 | None:intergenic |
AATACCTTGCAGTGTGATAA+TGG | 0.470796 | 1.4:+31229693 | MS.gene064974:intron |
GTTCCTGAGTTTAGTGCAGC+AGG | 0.472050 | 1.4:-31229733 | None:intergenic |
CCAGCCATTGCTGGTGCACT+GGG | 0.475042 | 1.4:-31230664 | None:intergenic |
ATGAAACCATTGTTCTTCAA+GGG | 0.487345 | 1.4:+31230054 | MS.gene064974:CDS |
AGCAAAGTCACATCCTGAAA+GGG | 0.487737 | 1.4:-31229928 | None:intergenic |
CTCGGATGTTGTAGTCGGCA+AGG | 0.499897 | 1.4:-31230721 | None:intergenic |
CCCAGTGCACCAGCAATGGC+TGG | 0.509192 | 1.4:+31230664 | MS.gene064974:CDS |
TGTCTGAACGCTCAACCCTC+AGG | 0.509977 | 1.4:-31230598 | None:intergenic |
CGAAGATGGTTGACCCCTCT+CGG | 0.520693 | 1.4:-31230739 | None:intergenic |
AGGGTCAGGTTGTCCTGTAG+TGG | 0.524923 | 1.4:-31230701 | None:intergenic |
AGAGGGTCAGAGGAACCAAA+TGG | 0.528144 | 1.4:-31230293 | None:intergenic |
GCAATCAAGCAAACTAGGGT+TGG | 0.530572 | 1.4:-31228453 | None:intergenic |
GCAAAGTCACATCCTGAAAG+GGG | 0.530762 | 1.4:-31229927 | None:intergenic |
GAAATGCATACCTGAAAGAT+GGG | 0.530956 | 1.4:-31228503 | None:intergenic |
TCTAATTCCAAAGGTGGCGG+TGG | 0.539115 | 1.4:-31230766 | None:intergenic |
CTGTGGCGCTAAGCCACTAC+AGG | 0.540076 | 1.4:+31230688 | MS.gene064974:CDS |
CAGCAAAGTCACATCCTGAA+AGG | 0.549420 | 1.4:-31229929 | None:intergenic |
GTGGCGGTGGCAGACGAAGA+TGG | 0.550475 | 1.4:-31230753 | None:intergenic |
TCTGATGAAAGAGTAGCTAA+AGG | 0.552581 | 1.4:-31230257 | None:intergenic |
ATATCCCAGTGCACCAGCAA+TGG | 0.553195 | 1.4:+31230660 | MS.gene064974:CDS |
ATGCAAATATCTAGCTTGAG+AGG | 0.554871 | 1.4:-31230311 | None:intergenic |
TCGGATGTTGTAGTCGGCAA+GGG | 0.556014 | 1.4:-31230720 | None:intergenic |
ATGTGACTTTGCTGCATCAG+AGG | 0.561657 | 1.4:+31229938 | MS.gene064974:CDS |
AGATCGCAATAGATTCTCAA+TGG | 0.562783 | 1.4:-31229802 | None:intergenic |
CCCCTCTCGGATGTTGTAGT+CGG | 0.565673 | 1.4:-31230726 | None:intergenic |
CAATATATCATAACTATACC+CGG | 0.570840 | 1.4:-31230174 | None:intergenic |
TGCAGCAATCAAGCAAACTA+GGG | 0.574861 | 1.4:-31228457 | None:intergenic |
ATCTAGCTTGAGAGGGTCAG+AGG | 0.576385 | 1.4:-31230303 | None:intergenic |
TGAAACCATTGTTCTTCAAG+GGG | 0.583182 | 1.4:+31230055 | MS.gene064974:CDS |
AAGGAAAGTTGTACCTCCTG+AGG | 0.588179 | 1.4:+31230582 | MS.gene064974:CDS |
CACCAGCAATGGCTGGTCTG+TGG | 0.597250 | 1.4:+31230671 | MS.gene064974:CDS |
TGGTGATAATCTAATTCCAA+AGG | 0.599905 | 1.4:-31230775 | None:intergenic |
ATAGTTATGATATATTGGCT+AGG | 0.603327 | 1.4:+31230180 | MS.gene064974:CDS |
TGCAAATATCTAGCTTGAGA+GGG | 0.605717 | 1.4:-31230310 | None:intergenic |
GACCATTTCAGACATGAACA+TGG | 0.605812 | 1.4:+31229972 | MS.gene064974:CDS |
GAATGCAAAACATGGTTGCA+AGG | 0.607126 | 1.4:+31229842 | MS.gene064974:CDS |
ACCATTTCAGACATGAACAT+GGG | 0.607412 | 1.4:+31229973 | MS.gene064974:CDS |
AGACTTCAAGGAGACAATGA+AGG | 0.608582 | 1.4:-31230027 | None:intergenic |
GCCGACTACAACATCCGAGA+GGG | 0.611255 | 1.4:+31230725 | MS.gene064974:CDS |
GAGTAGCTAAAGGAACTCGT+TGG | 0.611343 | 1.4:-31230247 | None:intergenic |
GACAATGAAGGAGTGGCCAT+AGG | 0.611353 | 1.4:-31230015 | None:intergenic |
ATCATAACTATACCCGGACT+CGG | 0.613425 | 1.4:-31230168 | None:intergenic |
AGGAAAGTTGTACCTCCTGA+GGG | 0.617887 | 1.4:+31230583 | MS.gene064974:CDS |
ATGTTCATGTCTGAAATGGT+CGG | 0.618581 | 1.4:-31229970 | None:intergenic |
TAATCTAATTCCAAAGGTGG+CGG | 0.621304 | 1.4:-31230769 | None:intergenic |
CTACCTGCTGCACTAAACTC+AGG | 0.633163 | 1.4:+31229730 | MS.gene064974:CDS |
TGATAATCTAATTCCAAAGG+TGG | 0.637981 | 1.4:-31230772 | None:intergenic |
TCAAGGAGACAATGAAGGAG+TGG | 0.639097 | 1.4:-31230022 | None:intergenic |
CTAGGGTTGGAGATCATCAA+CGG | 0.655898 | 1.4:-31228440 | None:intergenic |
CCATTTCAGACATGAACATG+GGG | 0.669952 | 1.4:+31229974 | MS.gene064974:CDS |
CAAAGTCACATCCTGAAAGG+GGG | 0.676119 | 1.4:-31229926 | None:intergenic |
CTGAACGCTCAACCCTCAGG+AGG | 0.686466 | 1.4:-31230595 | None:intergenic |
TCATGTCCGAATGCAAAACA+TGG | 0.686755 | 1.4:+31229834 | MS.gene064974:CDS |
GGAAATAGGAGGTACCTTGG+GGG | 0.715093 | 1.4:-31230336 | None:intergenic |
CCGACTACAACATCCGAGAG+GGG | 0.717881 | 1.4:+31230726 | MS.gene064974:CDS |
TGCCGACTACAACATCCGAG+AGG | 0.737323 | 1.4:+31230724 | MS.gene064974:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAGAATAAATGTTTAAA+CGG | - | chr1.4:31228838-31228857 | None:intergenic | 10.0% |
!! | AAAAATAGAATTATGCATTT+GGG | + | chr1.4:31230107-31230126 | MS.gene064974:CDS | 15.0% |
!! | AAAAGAATAAATGTTTAAAC+GGG | - | chr1.4:31228837-31228856 | None:intergenic | 15.0% |
!! | AAATTAAAGATGAATATTAG+AGG | + | chr1.4:31229164-31229183 | MS.gene064974:intron | 15.0% |
!! | AATAAAATAACAACTTTAAC+CGG | - | chr1.4:31230386-31230405 | None:intergenic | 15.0% |
!! | CACTATATTAAATAACTATT+GGG | + | chr1.4:31228706-31228725 | MS.gene064974:intron | 15.0% |
!! | TAAAAATAGAATTATGCATT+TGG | + | chr1.4:31230106-31230125 | MS.gene064974:CDS | 15.0% |
!! | TCACTATATTAAATAACTAT+TGG | + | chr1.4:31228705-31228724 | MS.gene064974:intron | 15.0% |
!!! | AAACACATGATAAATTTTTA+AGG | + | chr1.4:31228663-31228682 | MS.gene064974:intron | 15.0% |
!!! | CTTTATTTTATTCTAACAAA+TGG | + | chr1.4:31229634-31229653 | MS.gene064974:intron | 15.0% |
!!! | TTGATTTTAAAACTATTTCT+AGG | - | chr1.4:31228812-31228831 | None:intergenic | 15.0% |
!! | AAAGAATAAATGTTTAAACG+GGG | - | chr1.4:31228836-31228855 | None:intergenic | 20.0% |
!! | AAATCAACAAAGAAAATTTG+AGG | - | chr1.4:31230518-31230537 | None:intergenic | 20.0% |
!! | AATAAAAGTGATTCCTTAAA+TGG | - | chr1.4:31229423-31229442 | None:intergenic | 20.0% |
!! | ATAAAATAACAACTTTAACC+GGG | - | chr1.4:31230385-31230404 | None:intergenic | 20.0% |
!! | CTAAATATGAGTATTTAAGT+GGG | - | chr1.4:31229068-31229087 | None:intergenic | 20.0% |
!! | CTAATATAAAAACTTTGCAT+TGG | - | chr1.4:31229567-31229586 | None:intergenic | 20.0% |
!! | TAAATATGAGTATTTAAGTG+GGG | - | chr1.4:31229067-31229086 | None:intergenic | 20.0% |
!!! | AAGGAATCACTTTTATTTAT+TGG | + | chr1.4:31229426-31229445 | MS.gene064974:intron | 20.0% |
!!! | AGGAATCACTTTTATTTATT+GGG | + | chr1.4:31229427-31229446 | MS.gene064974:intron | 20.0% |
! | AAAAACTTTGCATTGGAAAT+TGG | - | chr1.4:31229560-31229579 | None:intergenic | 25.0% |
! | AAATATGAGTATTTAAGTGG+GGG | - | chr1.4:31229066-31229085 | None:intergenic | 25.0% |
! | AGAAAATAAGATACACTGAT+AGG | + | chr1.4:31229865-31229884 | MS.gene064974:CDS | 25.0% |
! | CAATATATCATAACTATACC+CGG | - | chr1.4:31230177-31230196 | None:intergenic | 25.0% |
! | CCACTTAAATACTCATATTT+AGG | + | chr1.4:31229066-31229085 | MS.gene064974:intron | 25.0% |
! | CCTAAATATGAGTATTTAAG+TGG | - | chr1.4:31229069-31229088 | None:intergenic | 25.0% |
! | GCATATATGACAACAAATTA+GGG | - | chr1.4:31228875-31228894 | None:intergenic | 25.0% |
! | TAAAATAACAACTTTAACCG+GGG | - | chr1.4:31230384-31230403 | None:intergenic | 25.0% |
! | TATTCTAACAAATGGTTCAA+AGG | + | chr1.4:31229642-31229661 | MS.gene064974:intron | 25.0% |
! | TGCATATATGACAACAAATT+AGG | - | chr1.4:31228876-31228895 | None:intergenic | 25.0% |
!! | AAAGTGAATTACTTGTTAAG+AGG | - | chr1.4:31229108-31229127 | None:intergenic | 25.0% |
!! | ATAGTTATGATATATTGGCT+AGG | + | chr1.4:31230180-31230199 | MS.gene064974:CDS | 25.0% |
!! | CTGTTAGTGTTTTCTATTTA+TGG | + | chr1.4:31230475-31230494 | MS.gene064974:intron | 25.0% |
!! | GAAGAAAAAGATTTTTGACA+AGG | + | chr1.4:31230634-31230653 | MS.gene064974:CDS | 25.0% |
!!! | AACTTATTTTCTAACTCTGA+AGG | + | chr1.4:31228547-31228566 | MS.gene064974:intron | 25.0% |
!!! | TGTCTTTTGTTATAAGAATC+TGG | - | chr1.4:31229255-31229274 | None:intergenic | 25.0% |
!!! | TTTAAAACTATTTCTAGGAC+CGG | - | chr1.4:31228807-31228826 | None:intergenic | 25.0% |
AAAATAACAACTTTAACCGG+GGG | - | chr1.4:31230383-31230402 | None:intergenic | 30.0% | |
ATCTTCATAAAGTCCCATAA+AGG | + | chr1.4:31230563-31230582 | MS.gene064974:CDS | 30.0% | |
ATGAAACCATTGTTCTTCAA+GGG | + | chr1.4:31230054-31230073 | MS.gene064974:CDS | 30.0% | |
CGGGTATAGTTATGATATAT+TGG | + | chr1.4:31230175-31230194 | MS.gene064974:CDS | 30.0% | |
GTATGACAATGATGAATAAG+TGG | + | chr1.4:31229381-31229400 | MS.gene064974:intron | 30.0% | |
TGAAAGATGGGAATAGTTAA+GGG | - | chr1.4:31228494-31228513 | None:intergenic | 30.0% | |
TGATTCCTTAAATGGAATCA+CGG | - | chr1.4:31229415-31229434 | None:intergenic | 30.0% | |
!! | CTCTAAAGCGAGAAAATTAA+AGG | - | chr1.4:31229229-31229248 | None:intergenic | 30.0% |
!! | CTTTAATTTTCTCGCTTTAG+AGG | + | chr1.4:31229227-31229246 | MS.gene064974:intron | 30.0% |
!! | GTTTTTCAAATGCCAAACAA+AGG | + | chr1.4:31230452-31230471 | MS.gene064974:intron | 30.0% |
!! | TCTGGAATCAAATTTTCCTA+TGG | + | chr1.4:31229999-31230018 | MS.gene064974:CDS | 30.0% |
!! | TTTTCTAACTCTGAAGGTTA+AGG | + | chr1.4:31228553-31228572 | MS.gene064974:intron | 30.0% |
AAACACTAACAGCCTTTGTT+TGG | - | chr1.4:31230467-31230486 | None:intergenic | 35.0% | |
AAATAACAACTTTAACCGGG+GGG | - | chr1.4:31230382-31230401 | None:intergenic | 35.0% | |
AATACCTTGCAGTGTGATAA+TGG | + | chr1.4:31229693-31229712 | MS.gene064974:intron | 35.0% | |
ACCATTTCAGACATGAACAT+GGG | + | chr1.4:31229973-31229992 | MS.gene064974:CDS | 35.0% | |
ACTTAGGGAGAAACATAATG+AGG | + | chr1.4:31229354-31229373 | MS.gene064974:intron | 35.0% | |
AGATCGCAATAGATTCTCAA+TGG | - | chr1.4:31229805-31229824 | None:intergenic | 35.0% | |
AGTTAAGAGTCCTACATTTG+TGG | - | chr1.4:31228965-31228984 | None:intergenic | 35.0% | |
ATTGTTCTTCAAGGGGAAAA+AGG | + | chr1.4:31230062-31230081 | MS.gene064974:CDS | 35.0% | |
ATTTATTTAACTAGTGCCCC+CGG | - | chr1.4:31229608-31229627 | None:intergenic | 35.0% | |
CAAAGCATGGAAAAGGAAAT+AGG | - | chr1.4:31230353-31230372 | None:intergenic | 35.0% | |
CAAATTAGGGTGTGTTTGTT+CGG | - | chr1.4:31228862-31228881 | None:intergenic | 35.0% | |
CTGAAAGATGGGAATAGTTA+AGG | - | chr1.4:31228495-31228514 | None:intergenic | 35.0% | |
CTTAACTATTCCCATCTTTC+AGG | + | chr1.4:31228493-31228512 | MS.gene064974:CDS | 35.0% | |
GAAAAACCAAAGCATGGAAA+AGG | - | chr1.4:31230360-31230379 | None:intergenic | 35.0% | |
GAAATGCATACCTGAAAGAT+GGG | - | chr1.4:31228506-31228525 | None:intergenic | 35.0% | |
GAGGTACAACTTTCCTTTAT+GGG | - | chr1.4:31230579-31230598 | None:intergenic | 35.0% | |
GATATCCGTGATTCCATTTA+AGG | + | chr1.4:31229407-31229426 | MS.gene064974:intron | 35.0% | |
GATGAAACCATTGTTCTTCA+AGG | + | chr1.4:31230053-31230072 | MS.gene064974:CDS | 35.0% | |
GGTTTCATCATTAGACTTCA+AGG | - | chr1.4:31230042-31230061 | None:intergenic | 35.0% | |
TCTGATGAAAGAGTAGCTAA+AGG | - | chr1.4:31230260-31230279 | None:intergenic | 35.0% | |
TGAAACCATTGTTCTTCAAG+GGG | + | chr1.4:31230055-31230074 | MS.gene064974:CDS | 35.0% | |
TGAAATGCATACCTGAAAGA+TGG | - | chr1.4:31228507-31228526 | None:intergenic | 35.0% | |
TTGTAGGCAGCATAAAAGAA+TGG | + | chr1.4:31229303-31229322 | MS.gene064974:intron | 35.0% | |
! | ATGCAAATATCTAGCTTGAG+AGG | - | chr1.4:31230314-31230333 | None:intergenic | 35.0% |
! | ATGTTCATGTCTGAAATGGT+CGG | - | chr1.4:31229973-31229992 | None:intergenic | 35.0% |
! | CTATTTCCTTTTCCATGCTT+TGG | + | chr1.4:31230351-31230370 | MS.gene064974:intron | 35.0% |
! | TGCAAATATCTAGCTTGAGA+GGG | - | chr1.4:31230313-31230332 | None:intergenic | 35.0% |
! | TTGCAACCATGTTTTGCATT+CGG | - | chr1.4:31229843-31229862 | None:intergenic | 35.0% |
! | TTTTTCCCCTTGAAGAACAA+TGG | - | chr1.4:31230063-31230082 | None:intergenic | 35.0% |
AAAGCCACATAAGATGAGGA+GGG | - | chr1.4:31229285-31229304 | None:intergenic | 40.0% | |
AACTGAAATTGTTGTCCCCT+TGG | - | chr1.4:31228755-31228774 | None:intergenic | 40.0% | |
ACATCATGTCATCGCACTTA+AGG | - | chr1.4:31228914-31228933 | None:intergenic | 40.0% | |
AGACTTCAAGGAGACAATGA+AGG | - | chr1.4:31230030-31230049 | None:intergenic | 40.0% | |
AGATATTTGCATAACCCCCA+AGG | + | chr1.4:31230322-31230341 | MS.gene064974:CDS | 40.0% | |
AGCAAAGTCACATCCTGAAA+GGG | - | chr1.4:31229931-31229950 | None:intergenic | 40.0% | |
AGCATGGAAAAGGAAATAGG+AGG | - | chr1.4:31230350-31230369 | None:intergenic | 40.0% | |
AGTTGTGTTGTGGTTTACCA+AGG | + | chr1.4:31228735-31228754 | MS.gene064974:intron | 40.0% | |
ATCATAACTATACCCGGACT+CGG | - | chr1.4:31230171-31230190 | None:intergenic | 40.0% | |
ATGACCATTATCACACTGCA+AGG | - | chr1.4:31229700-31229719 | None:intergenic | 40.0% | |
CATCATGTCATCGCACTTAA+GGG | - | chr1.4:31228913-31228932 | None:intergenic | 40.0% | |
CCATTTCAGACATGAACATG+GGG | + | chr1.4:31229974-31229993 | MS.gene064974:CDS | 40.0% | |
CCCTATAGACACAACACTTA+GGG | + | chr1.4:31229339-31229358 | MS.gene064974:intron | 40.0% | |
CTACAAAGCCACATAAGATG+AGG | - | chr1.4:31229289-31229308 | None:intergenic | 40.0% | |
CTAGGACCGGAAAAAATCAA+GGG | - | chr1.4:31228794-31228813 | None:intergenic | 40.0% | |
GAATGCAAAACATGGTTGCA+AGG | + | chr1.4:31229842-31229861 | MS.gene064974:CDS | 40.0% | |
GACCATTTCAGACATGAACA+TGG | + | chr1.4:31229972-31229991 | MS.gene064974:CDS | 40.0% | |
GAGTTGCTTGTGATTCCATT+TGG | + | chr1.4:31230278-31230297 | MS.gene064974:CDS | 40.0% | |
GTTGTGTTGTGGTTTACCAA+GGG | + | chr1.4:31228736-31228755 | MS.gene064974:intron | 40.0% | |
TCATGTCCGAATGCAAAACA+TGG | + | chr1.4:31229834-31229853 | MS.gene064974:CDS | 40.0% | |
TCCAGATATCGAGTCTTCTT+GGG | - | chr1.4:31228993-31229012 | None:intergenic | 40.0% | |
TCCCTATAGACACAACACTT+AGG | + | chr1.4:31229338-31229357 | MS.gene064974:intron | 40.0% | |
TGCAGCAATCAAGCAAACTA+GGG | - | chr1.4:31228460-31228479 | None:intergenic | 40.0% | |
TTGCAGCAATCAAGCAAACT+AGG | - | chr1.4:31228461-31228480 | None:intergenic | 40.0% | |
TTGTGTCTATAGGGACAACT+TGG | - | chr1.4:31229333-31229352 | None:intergenic | 40.0% | |
TTGTGTTGTGGTTTACCAAG+GGG | + | chr1.4:31228737-31228756 | MS.gene064974:intron | 40.0% | |
! | ATCGCACTTAAGGGCATATA+TGG | - | chr1.4:31228904-31228923 | None:intergenic | 40.0% |
! | CCCTAAGTGTTGTGTCTATA+GGG | - | chr1.4:31229342-31229361 | None:intergenic | 40.0% |
! | GGAGGTACAACTTTCCTTTA+TGG | - | chr1.4:31230580-31230599 | None:intergenic | 40.0% |
! | GTTTTTCTTAACCAGTGCTC+CGG | + | chr1.4:31229586-31229605 | MS.gene064974:intron | 40.0% |
! | TCCCTAAGTGTTGTGTCTAT+AGG | - | chr1.4:31229343-31229362 | None:intergenic | 40.0% |
! | TCTAGGACCGGAAAAAATCA+AGG | - | chr1.4:31228795-31228814 | None:intergenic | 40.0% |
! | TTTTCCCTCCTCATCTTATG+TGG | + | chr1.4:31229278-31229297 | MS.gene064974:intron | 40.0% |
! | TTTTTCTTAACCAGTGCTCC+GGG | + | chr1.4:31229587-31229606 | MS.gene064974:intron | 40.0% |
!! | AAAGGAAATAGGAGGTACCT+TGG | - | chr1.4:31230342-31230361 | None:intergenic | 40.0% |
!! | AAGGAAATAGGAGGTACCTT+GGG | - | chr1.4:31230341-31230360 | None:intergenic | 40.0% |
!! | CTCATCTTATGTGGCTTTGT+AGG | + | chr1.4:31229287-31229306 | MS.gene064974:intron | 40.0% |
!!! | CCATTGCCCTTGATTTTTTC+CGG | + | chr1.4:31228785-31228804 | MS.gene064974:intron | 40.0% |
AAGGAAAGTTGTACCTCCTG+AGG | + | chr1.4:31230582-31230601 | MS.gene064974:CDS | 45.0% | |
AGACATGAACATGGGGATTC+TGG | + | chr1.4:31229981-31230000 | MS.gene064974:CDS | 45.0% | |
AGGAAAGTTGTACCTCCTGA+GGG | + | chr1.4:31230583-31230602 | MS.gene064974:CDS | 45.0% | |
ATGTGACTTTGCTGCATCAG+AGG | + | chr1.4:31229938-31229957 | MS.gene064974:CDS | 45.0% | |
CAAAGCCACATAAGATGAGG+AGG | - | chr1.4:31229286-31229305 | None:intergenic | 45.0% | |
CAAAGTCACATCCTGAAAGG+GGG | - | chr1.4:31229929-31229948 | None:intergenic | 45.0% | |
CAGCAAAGTCACATCCTGAA+AGG | - | chr1.4:31229932-31229951 | None:intergenic | 45.0% | |
CCAGATATCGAGTCTTCTTG+GGG | - | chr1.4:31228992-31229011 | None:intergenic | 45.0% | |
CCCCATGTTCATGTCTGAAA+TGG | - | chr1.4:31229977-31229996 | None:intergenic | 45.0% | |
CCGGAAAAAATCAAGGGCAA+TGG | - | chr1.4:31228788-31228807 | None:intergenic | 45.0% | |
CTAGGGTTGGAGATCATCAA+CGG | - | chr1.4:31228443-31228462 | None:intergenic | 45.0% | |
CTCCAGATATCGAGTCTTCT+TGG | - | chr1.4:31228994-31229013 | None:intergenic | 45.0% | |
GAGTAGCTAAAGGAACTCGT+TGG | - | chr1.4:31230250-31230269 | None:intergenic | 45.0% | |
GCAAAGTCACATCCTGAAAG+GGG | - | chr1.4:31229930-31229949 | None:intergenic | 45.0% | |
GCAATCAAGCAAACTAGGGT+TGG | - | chr1.4:31228456-31228475 | None:intergenic | 45.0% | |
GCAGTCAATCTTTGCTGCAT+TGG | + | chr1.4:31230134-31230153 | MS.gene064974:CDS | 45.0% | |
GGAACTCGTTGGAAGTTCTT+CGG | - | chr1.4:31230239-31230258 | None:intergenic | 45.0% | |
GTTCTTCAAGGGGAAAAAGG+TGG | + | chr1.4:31230065-31230084 | MS.gene064974:CDS | 45.0% | |
TCAAGGAGACAATGAAGGAG+TGG | - | chr1.4:31230025-31230044 | None:intergenic | 45.0% | |
TGACATGATGTGTCGTGGTT+TGG | + | chr1.4:31228923-31228942 | MS.gene064974:intron | 45.0% | |
TGGGACATGAAGTTGTGTTG+TGG | + | chr1.4:31228725-31228744 | MS.gene064974:intron | 45.0% | |
! | TTTTCTTAACCAGTGCTCCG+GGG | + | chr1.4:31229588-31229607 | MS.gene064974:intron | 45.0% |
!! | AGGAAATAGGAGGTACCTTG+GGG | - | chr1.4:31230340-31230359 | None:intergenic | 45.0% |
AGAGGGTCAGAGGAACCAAA+TGG | - | chr1.4:31230296-31230315 | None:intergenic | 50.0% | |
AGTGCCTCGGACACTAGTTA+AGG | + | chr1.4:31229461-31229480 | MS.gene064974:intron | 50.0% | |
ATATCCCAGTGCACCAGCAA+TGG | + | chr1.4:31230660-31230679 | MS.gene064974:CDS | 50.0% | |
CCCCAAGAAGACTCGATATC+TGG | + | chr1.4:31228989-31229008 | MS.gene064974:intron | 50.0% | |
CTACCTGCTGCACTAAACTC+AGG | + | chr1.4:31229730-31229749 | MS.gene064974:CDS | 50.0% | |
GACAATGAAGGAGTGGCCAT+AGG | - | chr1.4:31230018-31230037 | None:intergenic | 50.0% | |
GCTTCCTTAACTAGTGTCCG+AGG | - | chr1.4:31229468-31229487 | None:intergenic | 50.0% | |
GGCTGTAGCACCACAAATGT+AGG | + | chr1.4:31228952-31228971 | MS.gene064974:intron | 50.0% | |
GGTCATGTTAACCAGTGCCT+CGG | + | chr1.4:31229448-31229467 | MS.gene064974:intron | 50.0% | |
GGTCCTAATTCTTCCGAGTC+CGG | + | chr1.4:31230155-31230174 | MS.gene064974:CDS | 50.0% | |
GTCCTAATTCTTCCGAGTCC+GGG | + | chr1.4:31230156-31230175 | MS.gene064974:CDS | 50.0% | |
GTTCCTGAGTTTAGTGCAGC+AGG | - | chr1.4:31229736-31229755 | None:intergenic | 50.0% | |
TACCCGGACTCGGAAGAATT+AGG | - | chr1.4:31230161-31230180 | None:intergenic | 50.0% | |
TCGGATGTTGTAGTCGGCAA+GGG | - | chr1.4:31230723-31230742 | None:intergenic | 50.0% | |
TGCGATGACATGATGTGTCG+TGG | + | chr1.4:31228918-31228937 | MS.gene064974:intron | 50.0% | |
TTAACTAGTGTCCGAGGCAC+TGG | - | chr1.4:31229462-31229481 | None:intergenic | 50.0% | |
TTTCTTAACCAGTGCTCCGG+GGG | + | chr1.4:31229589-31229608 | MS.gene064974:intron | 50.0% | |
! | ATCTAGCTTGAGAGGGTCAG+AGG | - | chr1.4:31230306-31230325 | None:intergenic | 50.0% |
! | TATCTGGAGCGTGATGTGAG+TGG | + | chr1.4:31229005-31229024 | MS.gene064974:intron | 50.0% |
!! | GGAAATAGGAGGTACCTTGG+GGG | - | chr1.4:31230339-31230358 | None:intergenic | 50.0% |
!! | TGTGTCGTGGTTTGGTAGTG+AGG | + | chr1.4:31228931-31228950 | MS.gene064974:intron | 50.0% |
!!! | CATGCTTTGGTTTTTCCCCC+CGG | + | chr1.4:31230364-31230383 | MS.gene064974:intron | 50.0% |
CCATGTTACTGCCCCCTTTC+AGG | + | chr1.4:31229915-31229934 | MS.gene064974:CDS | 55.0% | |
CCCCTCTCGGATGTTGTAGT+CGG | - | chr1.4:31230729-31230748 | None:intergenic | 55.0% | |
CCGACTACAACATCCGAGAG+GGG | + | chr1.4:31230726-31230745 | MS.gene064974:CDS | 55.0% | |
CCTGAAAGGGGGCAGTAACA+TGG | - | chr1.4:31229918-31229937 | None:intergenic | 55.0% | |
CGAAGATGGTTGACCCCTCT+CGG | - | chr1.4:31230742-31230761 | None:intergenic | 55.0% | |
CGGGGGGAAAAACCAAAGCA+TGG | - | chr1.4:31230366-31230385 | None:intergenic | 55.0% | |
CTCGGATGTTGTAGTCGGCA+AGG | - | chr1.4:31230724-31230743 | None:intergenic | 55.0% | |
GCCGACTACAACATCCGAGA+GGG | + | chr1.4:31230725-31230744 | MS.gene064974:CDS | 55.0% | |
GGAGCGTGATGTGAGTGGTT+GGG | + | chr1.4:31229010-31229029 | MS.gene064974:intron | 55.0% | |
TGGAGCGTGATGTGAGTGGT+TGG | + | chr1.4:31229009-31229028 | MS.gene064974:intron | 55.0% | |
TGTCTGAACGCTCAACCCTC+AGG | - | chr1.4:31230601-31230620 | None:intergenic | 55.0% | |
TGTTGTAGTCGGCAAGGGTC+AGG | - | chr1.4:31230718-31230737 | None:intergenic | 55.0% | |
! | AGGGTCAGGTTGTCCTGTAG+TGG | - | chr1.4:31230704-31230723 | None:intergenic | 55.0% |
! | TGCCGACTACAACATCCGAG+AGG | + | chr1.4:31230724-31230743 | MS.gene064974:CDS | 55.0% |
ACCAGCCATTGCTGGTGCAC+TGG | - | chr1.4:31230668-31230687 | None:intergenic | 60.0% | |
CCAGCCATTGCTGGTGCACT+GGG | - | chr1.4:31230667-31230686 | None:intergenic | 60.0% | |
CTGAACGCTCAACCCTCAGG+AGG | - | chr1.4:31230598-31230617 | None:intergenic | 60.0% | |
CTGTGGCGCTAAGCCACTAC+AGG | + | chr1.4:31230688-31230707 | MS.gene064974:CDS | 60.0% | |
!! | CACCAGCAATGGCTGGTCTG+TGG | + | chr1.4:31230671-31230690 | MS.gene064974:CDS | 60.0% |
AACTAGTGCCCCCGGAGCAC+TGG | - | chr1.4:31229600-31229619 | None:intergenic | 65.0% | |
CCCAGTGCACCAGCAATGGC+TGG | + | chr1.4:31230664-31230683 | MS.gene064974:CDS | 65.0% | |
CGCCACAGACCAGCCATTGC+TGG | - | chr1.4:31230676-31230695 | None:intergenic | 65.0% | |
GTGGCGGTGGCAGACGAAGA+TGG | - | chr1.4:31230756-31230775 | None:intergenic | 65.0% | |
TCGTCTGCCACCGCCACCTT+TGG | + | chr1.4:31230759-31230778 | MS.gene064974:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 31228434 | 31230787 | 31228434 | ID=MS.gene064974 |
chr1.4 | mRNA | 31228434 | 31230787 | 31228434 | ID=MS.gene064974.t1;Parent=MS.gene064974 |
chr1.4 | exon | 31228434 | 31228514 | 31228434 | ID=MS.gene064974.t1.exon1;Parent=MS.gene064974.t1 |
chr1.4 | CDS | 31228434 | 31228514 | 31228434 | ID=cds.MS.gene064974.t1;Parent=MS.gene064974.t1 |
chr1.4 | exon | 31229705 | 31230343 | 31229705 | ID=MS.gene064974.t1.exon2;Parent=MS.gene064974.t1 |
chr1.4 | CDS | 31229705 | 31230343 | 31229705 | ID=cds.MS.gene064974.t1;Parent=MS.gene064974.t1 |
chr1.4 | exon | 31230557 | 31230787 | 31230557 | ID=MS.gene064974.t1.exon3;Parent=MS.gene064974.t1 |
chr1.4 | CDS | 31230557 | 31230787 | 31230557 | ID=cds.MS.gene064974.t1;Parent=MS.gene064974.t1 |
Gene Sequence |
Protein sequence |