AlfalfaGEDB | MS.gene017308

M. sativa cultivar XinJiangDaYe / MS.gene017308

KEGG: K04506
GO: GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0019538 GO:0019941 GO:0032501 GO:0032502 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0046872 GO:0046914 GO:0048856 GO:0051603 GO:0071704 GO:0110165 GO:1901564 GO:1901575
PFAM: PF00240.26 PF03145.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017308.t1	XP_003615393.1	72.6	321	82	2	1	320	1	316	4.30E-126	461.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017308.t1	Q84K34	35.3	241	149	4	3	236	100	340	8.4e-38	159.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017308.t1	G7K621	72.6	321	82	2	1	320	1	316	3.1e-126	461.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene92430	MS.gene017308	PPI
MS.gene73975	MS.gene017308	PPI
MS.gene017308	MS.gene063583	PPI
MS.gene017315	MS.gene017308	PPI
MS.gene017308	MS.gene016802	PPI
MS.gene017308	MS.gene063596	PPI
MS.gene017308	MS.gene26202	PPI
MS.gene017308	MS.gene017337	PPI
MS.gene009561	MS.gene017308	PPI
MS.gene017308	MS.gene032536	PPI
MS.gene017308	MS.gene025074	PPI
MS.gene017308	MS.gene53618	PPI
MS.gene063599	MS.gene017308	PPI
MS.gene017308	MS.gene063586	PPI
MS.gene017308	MS.gene25827	PPI
MS.gene017308	MS.gene064974	PPI
MS.gene73977	MS.gene017308	PPI
MS.gene81818	MS.gene017308	PPI
MS.gene81807	MS.gene017308	PPI
MS.gene017316	MS.gene017308	PPI
MS.gene017308	MS.gene009570	PPI
MS.gene063576	MS.gene017308	PPI
MS.gene064975	MS.gene017308	PPI
MS.gene64287	MS.gene017308	PPI
MS.gene009570	MS.gene017308	PPI
MS.gene017308	MS.gene009573	PPI
MS.gene73973	MS.gene017308	PPI
MS.gene062462	MS.gene017308	PPI
MS.gene017308	MS.gene64288	PPI
MS.gene017308	MS.gene92430	PPI
MS.gene009559	MS.gene017308	PPI
MS.gene012651	MS.gene017308	PPI
MS.gene044173	MS.gene017308	PPI
MS.gene53618	MS.gene017308	PPI
MS.gene017308	MS.gene94984	PPI
MS.gene74055	MS.gene017308	PPI
MS.gene053692	MS.gene017308	PPI
MS.gene017308	MS.gene92427	PPI
MS.gene92432	MS.gene017308	PPI
MS.gene009547	MS.gene017308	PPI
MS.gene26198	MS.gene017308	PPI
MS.gene063589	MS.gene017308	PPI
MS.gene53616	MS.gene017308	PPI
MS.gene009591	MS.gene017308	PPI
MS.gene39862	MS.gene017308	PPI
MS.gene017309	MS.gene017308	PPI
MS.gene017308	MS.gene032535	PPI
MS.gene017308	MS.gene062461	PPI
MS.gene017321	MS.gene017308	PPI
MS.gene70750	MS.gene017308	PPI
MS.gene017308	MS.gene063587	PPI
MS.gene017308	MS.gene063610	PPI
MS.gene37878	MS.gene017308	PPI
MS.gene017308	MS.gene94985	PPI
MS.gene017314	MS.gene017308	PPI
MS.gene017308	MS.gene062462	PPI
MS.gene017308	MS.gene92433	PPI
MS.gene053691	MS.gene017308	PPI
MS.gene063584	MS.gene017308	PPI
MS.gene017308	MS.gene21254	PPI
MS.gene063581	MS.gene017308	PPI
MS.gene044969	MS.gene017308	PPI
MS.gene92433	MS.gene017308	PPI
MS.gene025072	MS.gene017308	PPI
MS.gene52735	MS.gene017308	PPI
MS.gene017308	MS.gene009564	PPI
MS.gene044971	MS.gene017308	PPI
MS.gene72920	MS.gene017308	PPI
MS.gene009576	MS.gene017308	PPI
MS.gene032535	MS.gene017308	PPI
MS.gene25827	MS.gene017308	PPI
MS.gene017308	MS.gene010031	PPI
MS.gene063583	MS.gene017308	PPI
MS.gene009566	MS.gene017308	PPI
MS.gene017308	MS.gene39862	PPI
MS.gene037087	MS.gene017308	PPI
MS.gene009577	MS.gene017308	PPI
MS.gene017308	MS.gene53619	PPI
MS.gene017308	MS.gene74054	PPI
MS.gene010031	MS.gene017308	PPI
MS.gene017318	MS.gene017308	PPI
MS.gene53617	MS.gene017308	PPI
MS.gene26189	MS.gene017308	PPI
MS.gene26186	MS.gene017308	PPI
MS.gene017324	MS.gene017308	PPI
MS.gene017308	MS.gene023735	PPI
MS.gene26190	MS.gene017308	PPI
MS.gene017308	MS.gene044173	PPI
MS.gene017308	MS.gene26186	PPI
MS.gene009560	MS.gene017308	PPI
MS.gene017308	MS.gene017318	PPI
MS.gene009562	MS.gene017308	PPI
MS.gene26197	MS.gene017308	PPI
MS.gene41691	MS.gene017308	PPI
MS.gene26191	MS.gene017308	PPI
MS.gene017308	MS.gene062459	PPI
MS.gene04692	MS.gene017308	PPI
MS.gene063603	MS.gene017308	PPI
MS.gene042174	MS.gene017308	PPI
MS.gene61945	MS.gene017308	PPI
MS.gene017308	MS.gene025072	PPI
MS.gene92435	MS.gene017308	PPI
MS.gene063598	MS.gene017308	PPI
MS.gene017308	MS.gene70750	PPI
MS.gene81557	MS.gene017308	PPI
MS.gene017308	MS.gene68940	PPI
MS.gene92429	MS.gene017308	PPI
MS.gene009543	MS.gene017308	PPI
MS.gene017308	MS.gene017300	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017308.t1	MTR_5g067400	72.586	321	82	2	1	320	1	316	1.23e-163	458
MS.gene017308.t1	MTR_1g046640	71.340	321	85	3	1	320	1	315	8.27e-157	441
MS.gene017308.t1	MTR_1g046650	69.782	321	90	3	1	320	1	315	1.20e-151	428
MS.gene017308.t1	MTR_1g046650	69.782	321	90	3	1	320	32	346	1.72e-151	429
MS.gene017308.t1	MTR_7g094390	69.497	318	91	2	3	319	164	476	4.67e-151	432
MS.gene017308.t1	MTR_7g024290	69.782	321	90	3	1	319	1	316	4.74e-151	426
MS.gene017308.t1	MTR_5g076520	70.347	317	90	3	1	315	1	315	6.01e-150	424
MS.gene017308.t1	MTR_5g076540	89.474	228	23	1	1	227	1	228	3.24e-145	409
MS.gene017308.t1	MTR_5g076720	65.409	318	107	2	3	319	74	389	2.12e-143	410
MS.gene017308.t1	MTR_1g046650	69.257	296	84	3	26	320	26	315	9.84e-136	387
MS.gene017308.t1	MTR_5g076505	69.388	294	87	2	27	319	23	314	1.04e-135	387
MS.gene017308.t1	MTR_5g076660	66.038	318	99	3	4	317	26	338	1.44e-134	386
MS.gene017308.t1	MTR_5g061290	62.145	317	118	2	4	319	11	326	4.14e-134	384
MS.gene017308.t1	MTR_2g038430	61.162	327	114	3	4	319	18	342	1.14e-133	384
MS.gene017308.t1	MTR_5g076370	63.323	319	107	4	4	317	26	339	1.58e-130	375
MS.gene017308.t1	MTR_2g038420	62.382	319	115	3	4	319	18	334	1.79e-130	375
MS.gene017308.t1	MTR_5g076810	70.803	274	73	3	49	320	2	270	1.36e-127	365
MS.gene017308.t1	MTR_5g076820	65.125	281	92	3	1	279	10	286	4.03e-118	342
MS.gene017308.t1	MTR_1g046650	67.063	252	77	2	69	320	1	246	2.10e-111	323
MS.gene017308.t1	MTR_5g077020	58.974	195	67	4	54	239	19	209	1.45e-65	206
MS.gene017308.t1	MTR_4g094468	44.958	238	125	4	5	238	91	326	2.59e-61	198
MS.gene017308.t1	MTR_4g058025	66.406	128	42	1	67	193	1	128	1.55e-48	161
MS.gene017308.t1	MTR_7g105080	67.105	76	25	0	245	320	1	76	2.19e-25	99.0
MS.gene017308.t1	MTR_3g092130	67.105	76	25	0	245	320	1	76	2.19e-25	99.0
MS.gene017308.t1	MTR_1g059690	67.105	76	25	0	245	320	1	76	2.19e-25	99.0
MS.gene017308.t1	MTR_5g033960	67.105	76	25	0	245	320	1	76	2.77e-25	99.8
MS.gene017308.t1	MTR_8g088060	67.105	76	25	0	245	320	1	76	2.86e-25	99.4
MS.gene017308.t1	MTR_5g092700	67.105	76	25	0	245	320	1	76	3.34e-25	99.4
MS.gene017308.t1	MTR_5g092700	45.946	74	40	0	247	320	79	152	1.19e-11	62.4
MS.gene017308.t1	MTR_4g073580	67.105	76	25	0	245	320	1	76	3.34e-25	99.4
MS.gene017308.t1	MTR_4g073580	45.946	74	40	0	247	320	79	152	1.19e-11	62.4
MS.gene017308.t1	MTR_3g092130	67.105	76	25	0	245	320	1	76	5.20e-25	98.2
MS.gene017308.t1	MTR_4g073580	67.105	76	25	0	245	320	1	76	8.67e-25	99.0
MS.gene017308.t1	MTR_4g088485	67.105	76	25	0	245	320	1	76	1.64e-24	99.4
MS.gene017308.t1	MTR_4g088485	67.105	76	25	0	245	320	138	213	1.64e-24	99.4
MS.gene017308.t1	MTR_4g088485	53.947	76	20	1	245	320	77	137	2.07e-15	74.3
MS.gene017308.t1	MTR_7g116360	67.105	76	25	0	245	320	1	76	2.13e-24	99.4
MS.gene017308.t1	MTR_7g116360	67.105	76	25	0	245	320	77	152	2.13e-24	99.4
MS.gene017308.t1	MTR_7g116360	67.105	76	25	0	245	320	153	228	2.13e-24	99.4
MS.gene017308.t1	MTR_1g066390	67.105	76	25	0	245	320	1	76	2.17e-24	99.4
MS.gene017308.t1	MTR_1g066390	67.105	76	25	0	245	320	77	152	2.17e-24	99.4
MS.gene017308.t1	MTR_1g066390	67.105	76	25	0	245	320	153	228	2.17e-24	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	1	76	5.83e-24	99.0
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	77	152	5.83e-24	99.0
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	153	228	5.83e-24	99.0
MS.gene017308.t1	MTR_6g061930	67.105	76	25	0	245	320	1	76	8.11e-24	99.0
MS.gene017308.t1	MTR_6g061930	67.105	76	25	0	245	320	77	152	8.11e-24	99.0
MS.gene017308.t1	MTR_6g061930	67.105	76	25	0	245	320	214	289	8.11e-24	99.0
MS.gene017308.t1	MTR_6g061930	51.316	76	22	1	245	320	153	213	8.03e-14	71.2
MS.gene017308.t1	MTR_7g116360	67.105	76	25	0	245	320	49	124	8.30e-24	99.0
MS.gene017308.t1	MTR_7g116360	67.105	76	25	0	245	320	125	200	8.30e-24	99.0
MS.gene017308.t1	MTR_7g116360	67.105	76	25	0	245	320	201	276	8.30e-24	99.0
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	1	76	9.23e-24	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	77	152	9.23e-24	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	153	228	9.23e-24	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	229	304	9.23e-24	99.4
MS.gene017308.t1	MTR_4g080920	65.789	76	26	0	245	320	77	152	9.50e-24	97.4
MS.gene017308.t1	MTR_4g080920	65.789	76	26	0	245	320	1	76	2.25e-23	96.7
MS.gene017308.t1	MTR_4g080920	50.000	76	38	0	245	320	153	228	3.64e-16	76.6
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	1	76	1.36e-23	98.2
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	77	152	1.36e-23	98.2
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	153	228	1.36e-23	98.2
MS.gene017308.t1	MTR_5g061310	64.935	77	27	0	244	320	1	77	2.45e-23	92.0
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	1	76	2.46e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	77	152	2.46e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	153	228	2.46e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	229	304	2.46e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	305	380	2.46e-23	99.4
MS.gene017308.t1	MTR_8g081020	67.105	76	25	0	245	320	1	76	2.46e-23	99.4
MS.gene017308.t1	MTR_8g081020	67.105	76	25	0	245	320	77	152	2.46e-23	99.4
MS.gene017308.t1	MTR_8g081020	67.105	76	25	0	245	320	153	228	2.46e-23	99.4
MS.gene017308.t1	MTR_8g081020	67.105	76	25	0	245	320	229	304	2.46e-23	99.4
MS.gene017308.t1	MTR_8g081020	67.105	76	25	0	245	320	305	380	2.46e-23	99.4
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	1	76	2.59e-23	99.4
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	77	152	2.59e-23	99.4
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	153	228	2.59e-23	99.4
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	305	380	2.59e-23	99.4
MS.gene017308.t1	MTR_4g091580	65.789	76	26	0	245	320	229	304	8.79e-23	97.8
MS.gene017308.t1	MTR_4g080797	67.105	76	25	0	245	320	1	76	2.64e-23	99.4
MS.gene017308.t1	MTR_4g080797	67.105	76	25	0	245	320	77	152	2.64e-23	99.4
MS.gene017308.t1	MTR_4g080797	67.105	76	25	0	245	320	153	228	2.64e-23	99.4
MS.gene017308.t1	MTR_4g080797	67.105	76	25	0	245	320	229	304	2.64e-23	99.4
MS.gene017308.t1	MTR_4g080797	67.105	76	25	0	245	320	305	380	2.64e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	1	76	2.64e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	77	152	2.64e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	153	228	2.64e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	229	304	2.64e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	305	380	2.64e-23	99.4
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	1	76	3.00e-23	100
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	77	152	9.58e-23	99.4
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	153	228	9.58e-23	99.4
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	229	304	9.58e-23	99.4
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	305	380	9.58e-23	99.4
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	381	456	9.58e-23	99.4
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	457	532	9.58e-23	99.4
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	533	608	9.58e-23	99.4
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	609	684	9.58e-23	99.4
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	685	760	9.58e-23	99.4
MS.gene017308.t1	MTR_4g088495	67.105	76	25	0	245	320	761	836	9.58e-23	99.4
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	305	380	3.31e-23	100
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	1	76	7.15e-23	99.4
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	77	152	7.15e-23	99.4
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	153	228	7.15e-23	99.4
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	229	304	7.15e-23	99.4
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	381	456	7.15e-23	99.4
MS.gene017308.t1	MTR_4g091580	67.105	76	25	0	245	320	457	532	7.15e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	1	76	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	77	152	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	153	228	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	229	304	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	305	380	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	381	456	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	1	76	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	77	152	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	153	228	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	229	304	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	305	380	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	381	456	4.72e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	1	76	6.62e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	77	152	6.62e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	153	228	6.62e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	229	304	6.62e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	305	380	6.62e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	381	456	6.62e-23	99.4
MS.gene017308.t1	MTR_8g018230	67.105	76	25	0	245	320	457	532	6.62e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	1	76	6.69e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	77	152	6.69e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	153	228	6.69e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	229	304	6.69e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	305	380	6.69e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	381	456	6.69e-23	99.4
MS.gene017308.t1	MTR_4g081010	67.105	76	25	0	245	320	457	532	6.69e-23	99.4
MS.gene017308.t1	MTR_7g085590	25.210	238	164	3	6	239	58	285	1.05e-20	90.5
MS.gene017308.t1	MTR_8g479250	65.789	76	26	0	245	320	141	216	2.53e-17	81.3
MS.gene017308.t1	MTR_8g479250	56.944	72	20	1	245	316	217	277	2.46e-15	75.5
MS.gene017308.t1	MTR_4g009980	51.515	66	32	0	254	319	5	70	3.27e-17	75.1
MS.gene017308.t1	MTR_3g091510	35.507	138	82	4	10	143	59	193	4.36e-17	80.9
MS.gene017308.t1	MTR_3g017590	31.429	175	99	6	10	170	52	219	7.02e-17	80.1
MS.gene017308.t1	MTR_7g117415	34.483	145	88	4	3	143	53	194	1.18e-16	79.7
MS.gene017308.t1	MTR_1g054335	32.335	167	106	4	11	170	58	224	1.99e-16	79.0
MS.gene017308.t1	MTR_7g093600	32.335	167	106	4	11	170	59	225	7.49e-16	77.0
MS.gene017308.t1	MTR_8g027520	34.483	145	88	4	3	143	45	186	7.79e-16	77.4
MS.gene017308.t1	MTR_1g008120	34.783	138	83	4	10	143	67	201	8.16e-16	77.4
MS.gene017308.t1	MTR_8g027520	34.483	145	88	4	3	143	36	177	8.99e-16	77.0
MS.gene017308.t1	MTR_8g038370	31.690	142	90	4	10	147	111	249	2.23e-15	76.3
MS.gene017308.t1	MTR_5g076740	57.333	75	29	2	245	316	86	160	3.43e-15	72.4
MS.gene017308.t1	MTR_5g076760	60.345	58	23	0	255	312	5	62	3.56e-14	67.4
MS.gene017308.t1	MTR_5g076350	48.684	76	38	1	245	319	8	83	1.10e-12	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017308.t1	AT5G37930	35.470	234	146	3	8	236	107	340	1.81e-43	152
MS.gene017308.t1	AT1G66620	33.613	238	148	4	11	239	41	277	2.73e-37	135
MS.gene017308.t1	AT5G37890	34.375	224	142	3	5	223	42	265	1.03e-35	130
MS.gene017308.t1	AT5G37870	32.927	246	157	6	5	242	36	281	3.42e-33	124
MS.gene017308.t1	AT1G66660	31.600	250	160	7	2	240	94	343	1.78e-30	118
MS.gene017308.t1	AT1G66650	32.468	231	144	7	4	223	76	305	2.53e-30	117
MS.gene017308.t1	AT5G37910	32.727	220	141	4	11	223	35	254	9.05e-30	114
MS.gene017308.t1	AT5G62800	34.101	217	126	5	11	221	40	245	2.98e-29	115
MS.gene017308.t1	AT5G62800	34.101	217	126	5	11	221	40	245	3.60e-29	114
MS.gene017308.t1	AT1G66630	36.207	174	105	4	11	178	46	219	7.72e-27	107
MS.gene017308.t1	AT1G23410	67.105	76	25	0	245	320	1	76	2.47e-25	99.8
MS.gene017308.t1	AT3G52590	67.105	76	25	0	245	320	1	76	2.74e-25	99.0
MS.gene017308.t1	AT2G36170	67.105	76	25	0	245	320	1	76	2.74e-25	99.0
MS.gene017308.t1	AT2G47110	67.105	76	25	0	245	320	1	76	2.91e-25	99.8
MS.gene017308.t1	AT2G47110	67.105	76	25	0	245	320	1	76	2.91e-25	99.8
MS.gene017308.t1	AT3G62250	67.105	76	25	0	245	320	1	76	3.20e-25	99.4
MS.gene017308.t1	AT2G35635	67.105	76	25	0	245	320	1	76	3.49e-25	99.4
MS.gene017308.t1	AT2G35635	44.595	74	41	0	247	320	79	152	7.66e-11	60.1
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	1	76	3.85e-25	99.4
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	77	152	3.85e-25	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	1	76	3.85e-25	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	77	152	3.85e-25	99.4
MS.gene017308.t1	AT1G31340	67.105	76	25	0	245	320	1	76	4.34e-25	99.0
MS.gene017308.t1	AT1G31340	45.946	74	40	0	247	320	79	152	8.12e-12	62.8
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	1	76	2.24e-24	99.4
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	77	152	2.24e-24	99.4
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	153	228	2.24e-24	99.4
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	1	76	2.24e-24	99.4
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	77	152	2.24e-24	99.4
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	153	228	2.24e-24	99.4
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	1	76	2.24e-24	99.4
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	77	152	2.24e-24	99.4
MS.gene017308.t1	AT4G05050	67.105	76	25	0	245	320	153	228	2.24e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	1	76	2.24e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	77	152	2.24e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	153	228	2.24e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	1	76	2.24e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	77	152	2.24e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	153	228	2.24e-24	99.4
MS.gene017308.t1	AT1G55060	67.105	76	25	0	245	320	153	228	5.10e-24	98.2
MS.gene017308.t1	AT1G55060	65.789	76	26	0	245	320	77	152	7.38e-24	97.8
MS.gene017308.t1	AT1G55060	61.842	76	29	0	245	320	1	76	4.20e-20	87.8
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	1	76	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	77	152	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	153	228	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	229	304	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	1	76	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	77	152	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	153	228	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	229	304	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	1	76	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	77	152	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	153	228	8.79e-24	99.4
MS.gene017308.t1	AT5G03240	67.105	76	25	0	245	320	229	304	8.79e-24	99.4
MS.gene017308.t1	AT5G20620	67.105	76	25	0	245	320	1	76	8.79e-24	99.4
MS.gene017308.t1	AT5G20620	67.105	76	25	0	245	320	77	152	8.79e-24	99.4
MS.gene017308.t1	AT5G20620	67.105	76	25	0	245	320	153	228	8.79e-24	99.4
MS.gene017308.t1	AT5G20620	67.105	76	25	0	245	320	229	304	8.79e-24	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	1	76	9.76e-24	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	77	152	9.76e-24	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	153	228	9.76e-24	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	229	304	9.76e-24	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	1	76	9.76e-24	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	77	152	9.76e-24	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	153	228	9.76e-24	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	229	304	9.76e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	1	76	9.76e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	77	152	9.76e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	153	228	9.76e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	229	304	9.76e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	1	76	9.76e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	77	152	9.76e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	153	228	9.76e-24	99.4
MS.gene017308.t1	AT4G02890	67.105	76	25	0	245	320	229	304	9.76e-24	99.4
MS.gene017308.t1	AT1G65350	67.105	76	25	0	245	320	1	76	1.13e-23	99.4
MS.gene017308.t1	AT1G65350	65.789	76	26	0	245	320	152	227	1.54e-22	96.3
MS.gene017308.t1	AT1G65350	65.789	76	25	1	245	320	77	151	7.74e-21	91.7
MS.gene017308.t1	AT1G65350	53.333	90	28	1	245	320	228	317	1.87e-17	82.0
MS.gene017308.t1	AT5G20620	67.105	76	25	0	245	320	1	76	2.51e-23	99.4
MS.gene017308.t1	AT5G20620	67.105	76	25	0	245	320	77	152	2.51e-23	99.4
MS.gene017308.t1	AT5G20620	67.105	76	25	0	245	320	153	228	2.51e-23	99.4
MS.gene017308.t1	AT5G20620	67.105	76	25	0	245	320	229	304	2.51e-23	99.4
MS.gene017308.t1	AT5G20620	67.105	76	25	0	245	320	305	380	2.51e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	1	76	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	77	152	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	153	228	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	229	304	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	305	380	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	1	76	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	77	152	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	153	228	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	229	304	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	305	380	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	1	76	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	77	152	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	153	228	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	229	304	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	305	380	2.76e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	1	76	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	77	152	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	153	228	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	229	304	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	305	380	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	381	456	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	1	76	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	77	152	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	153	228	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	229	304	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	305	380	4.95e-23	99.4
MS.gene017308.t1	AT4G05320	67.105	76	25	0	245	320	381	456	4.95e-23	99.4
MS.gene017308.t1	AT5G37640	50.000	120	49	3	206	320	41	154	7.74e-23	97.1
MS.gene017308.t1	AT5G37640	63.158	76	28	0	245	320	155	230	6.53e-21	91.7
MS.gene017308.t1	AT5G37640	62.338	77	28	1	245	320	231	307	1.54e-19	87.8
MS.gene017308.t1	AT5G37640	56.579	76	33	0	245	320	3	78	8.15e-15	74.3
MS.gene017308.t1	AT3G09790	64.474	76	27	0	245	320	79	154	1.64e-20	92.4
MS.gene017308.t1	AT3G09790	65.753	73	25	0	245	317	552	624	1.75e-20	92.4
MS.gene017308.t1	AT3G09790	63.158	76	28	0	245	320	3	78	2.22e-20	92.0
MS.gene017308.t1	AT3G09790	48.780	82	35	2	245	319	155	236	1.06e-11	66.2
MS.gene017308.t1	AT3G09790	53.425	73	32	1	245	315	319	391	2.03e-11	65.1
MS.gene017308.t1	AT3G09790	49.315	73	37	0	245	317	393	465	2.22e-11	65.1
MS.gene017308.t1	AT3G09790	64.474	76	27	0	245	320	79	154	1.64e-20	92.4
MS.gene017308.t1	AT3G09790	65.753	73	25	0	245	317	552	624	1.75e-20	92.4
MS.gene017308.t1	AT3G09790	63.158	76	28	0	245	320	3	78	2.22e-20	92.0
MS.gene017308.t1	AT3G09790	48.780	82	35	2	245	319	155	236	1.06e-11	66.2
MS.gene017308.t1	AT3G09790	53.425	73	32	1	245	315	319	391	2.03e-11	65.1
MS.gene017308.t1	AT3G09790	49.315	73	37	0	245	317	393	465	2.22e-11	65.1
MS.gene017308.t1	AT1G53930	52.525	99	40	1	226	317	60	158	5.27e-20	85.5
MS.gene017308.t1	AT3G61790	32.222	180	105	6	3	170	52	226	2.45e-16	79.0
MS.gene017308.t1	AT1G66660	29.231	195	128	6	56	240	25	219	6.26e-16	75.9
MS.gene017308.t1	AT1G66610	23.759	282	146	7	11	223	53	334	7.51e-16	77.8
MS.gene017308.t1	AT4G27880	34.783	138	83	4	10	143	60	194	9.19e-16	77.0
MS.gene017308.t1	AT5G37900	27.004	237	128	6	11	236	32	234	1.26e-14	72.8
MS.gene017308.t1	AT3G58040	30.357	168	110	4	10	170	56	223	1.50e-14	73.6
MS.gene017308.t1	AT3G58040	30.357	168	110	4	10	170	56	223	1.50e-14	73.6
MS.gene017308.t1	AT3G58040	32.609	138	86	4	10	143	56	190	1.57e-14	72.0
MS.gene017308.t1	AT1G53950	47.945	73	38	0	243	315	67	139	1.01e-13	67.8
MS.gene017308.t1	AT2G41980	29.762	168	111	4	10	170	53	220	1.09e-13	70.9
MS.gene017308.t1	AT1G11980	41.333	75	44	0	245	319	1	75	1.82e-11	59.7

Find 66 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGCAGCAATCAAGCAATTT+TGG	0.117849	5.1:+59401052	None:intergenic
CTTCTCTTGGATGTTGTAAT+TGG	0.203344	5.1:+59399426	None:intergenic
ATTAACTATTCCCGTCTTTC+AGG	0.267243	5.1:-59401017	MS.gene017308:intron
AGATTTGATGTGGACAATTA+AGG	0.268552	5.1:+59400245	None:intergenic
CCTCAGGGAGATAATCTTTC+CGG	0.283715	5.1:+59399570	None:intergenic
TGAAAATAGATATGATATAT+TGG	0.310816	5.1:-59400100	MS.gene017308:CDS
TACCATGGACATGGGGTATA+TGG	0.312833	5.1:+59399936	None:intergenic
CAATAATAGAGCTACACTTT+TGG	0.315254	5.1:-59400169	MS.gene017308:CDS
TGGCACTTGTTCCCAAGTTT+AGG	0.332363	5.1:+59400531	None:intergenic
ACCTCATCCTCCGCCTCATT+GGG	0.342907	5.1:-59399393	MS.gene017308:CDS
GACCTCATCCTCCGCCTCAT+TGG	0.345412	5.1:-59399394	MS.gene017308:CDS
ACAAAGTCACAGCTTGAAAC+AGG	0.355772	5.1:+59400345	None:intergenic
TGGAAGTTATGCAAATTTCT+AGG	0.364968	5.1:+59399956	None:intergenic
TGAAAGACGGGAATAGTTAA+TGG	0.366094	5.1:+59401019	None:intergenic
CTGCATTGGTCCAAACTCTT+CGG	0.374331	5.1:-59400127	MS.gene017308:CDS
CAGCAGAGTCTGATATTTGC+TGG	0.432871	5.1:-59399478	MS.gene017308:CDS
GGTCGATGGTTGACTTCTCT+TGG	0.439143	5.1:+59399413	None:intergenic
GCTGTAAATATTTGCTGCAT+TGG	0.452026	5.1:-59400141	MS.gene017308:CDS
TGTCTGAACTATTAACCCTC+AGG	0.468214	5.1:+59399554	None:intergenic
TCTACCTGCTATCCTAAACT+TGG	0.468684	5.1:-59400543	MS.gene017308:CDS
GTTCCCAAGTTTAGGATAGC+AGG	0.476535	5.1:+59400539	None:intergenic
TCCCAATGAGGCGGAGGATG+AGG	0.484743	5.1:+59399392	None:intergenic
CTTGGATGTTGTAATTGGCA+AGG	0.504046	5.1:+59399431	None:intergenic
AAGAACCAAATGGAATCAAA+AGG	0.505585	5.1:+59399992	None:intergenic
AGAAGATTCTTTACAAGGAA+GGG	0.511523	5.1:-59399513	MS.gene017308:CDS
GAGAAGATTCTTTACAAGGA+AGG	0.516468	5.1:-59399514	MS.gene017308:CDS
AAATAAGTTACATTGGAAAG+AGG	0.531462	5.1:-59400407	MS.gene017308:CDS
GGAGATAATCTTTCCGGTCA+AGG	0.533166	5.1:+59399576	None:intergenic
GATAGGAGGTACCATGGACA+TGG	0.539952	5.1:+59399927	None:intergenic
TTTCATCATTAGATTTGATG+TGG	0.543165	5.1:+59400235	None:intergenic
GTTGCAATACAGTGTGATAA+CGG	0.543617	5.1:-59400579	MS.gene017308:intron
GAAGGAGAAGATTCTTTACA+AGG	0.548214	5.1:-59399518	MS.gene017308:CDS
GAAATGCATACCTGAAAGAC+GGG	0.553484	5.1:+59401007	None:intergenic
TTGGATGTTGTAATTGGCAA+GGG	0.554921	5.1:+59399432	None:intergenic
GTCTGAACTATTAACCCTCA+GGG	0.557234	5.1:+59399555	None:intergenic
AGAGCTTTAGAAGAACCAAA+TGG	0.558433	5.1:+59399982	None:intergenic
AATGAGAAAATAAGTTACAT+TGG	0.564597	5.1:-59400414	MS.gene017308:CDS
CAGGGCAGCAACATGGCACA+TGG	0.569717	5.1:+59400364	None:intergenic
AGATAGCAATAGATTCTCAA+TGG	0.569736	5.1:+59400473	None:intergenic
TGAAATGCATACCTGAAAGA+CGG	0.582308	5.1:+59401006	None:intergenic
CAGCAAATATCAGACTCTGC+TGG	0.582680	5.1:+59399479	None:intergenic
AGCATTTCAGCGATAAACAC+GGG	0.591595	5.1:-59400299	MS.gene017308:CDS
TCTAGCTCCCAATGAGGCGG+AGG	0.592226	5.1:+59399386	None:intergenic
CTTGAAACAGGGCAGCAACA+TGG	0.596348	5.1:+59400357	None:intergenic
ATAGGAGGTACCATGGACAT+GGG	0.597066	5.1:+59399928	None:intergenic
TTCCATATACCCCATGTCCA+TGG	0.598875	5.1:-59399938	MS.gene017308:intron
ATCAAAAGGAACTCTGAGGA+AGG	0.602444	5.1:+59400006	None:intergenic
ATAGATATGATATATTGGCT+AGG	0.603327	5.1:-59400095	MS.gene017308:CDS
AGACAAAATAGTCAATGTGA+AGG	0.609490	5.1:-59399536	MS.gene017308:CDS
TTTGGGTTGGAAATCATCAG+AGG	0.624519	5.1:+59401070	None:intergenic
CGGAAAGATTATCTCCCTGA+GGG	0.627927	5.1:-59399569	MS.gene017308:CDS
CTACCTGCTATCCTAAACTT+GGG	0.628296	5.1:-59400542	MS.gene017308:CDS
GAGGCGGAGGATGAGGTCGA+TGG	0.629995	5.1:+59399399	None:intergenic
CAAAGTCACAGCTTGAAACA+GGG	0.630767	5.1:+59400346	None:intergenic
AAGCATTTCAGCGATAAACA+CGG	0.632628	5.1:-59400300	MS.gene017308:CDS
AGATACGCAACAAGCACTTG+TGG	0.644946	5.1:+59400511	None:intergenic
ATTTGCTGGTAAGCGACTAG+AGG	0.653176	5.1:-59399464	MS.gene017308:CDS
TTACAAGGAAGGGATATCAG+TGG	0.653422	5.1:-59399503	MS.gene017308:CDS
CCGGAAAGATTATCTCCCTG+AGG	0.669429	5.1:-59399570	MS.gene017308:CDS
TCATCTAGCTCCCAATGAGG+CGG	0.677483	5.1:+59399383	None:intergenic
TCATGTCCGAATGCAAAACA+TGG	0.686755	5.1:-59400441	MS.gene017308:CDS
TAGGAGGTACCATGGACATG+GGG	0.687406	5.1:+59399929	None:intergenic
TGGAATCAAAAGGAACTCTG+AGG	0.687967	5.1:+59400002	None:intergenic
TGGTCATCTAGCTCCCAATG+AGG	0.689036	5.1:+59399380	None:intergenic
GCATTTCAGCGATAAACACG+GGG	0.706588	5.1:-59400298	MS.gene017308:CDS
GAGTTGTGAAAGTAACACGT+TGG	0.729211	5.1:+59400028	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATAAACAAATCAAAGAAA+AGG	+	chr5.1:59400563-59400582	None:intergenic	15.0%
!!	ATTGAAGAAAATAAAGAAAA+AGG	-	chr5.1:59399793-59399812	MS.gene017308:intron	15.0%
!!	TGAAAATAGATATGATATAT+TGG	-	chr5.1:59400363-59400382	MS.gene017308:CDS	15.0%
!!	TTGAAGAAAATAAAGAAAAA+GGG	-	chr5.1:59399794-59399813	MS.gene017308:intron	15.0%
!!!	ACAACTTTTTACATTAAAAA+AGG	+	chr5.1:59399754-59399773	None:intergenic	15.0%
!!!	TATATTTCAATATTTTCAGA+TGG	-	chr5.1:59399579-59399598	MS.gene017308:CDS	15.0%
!!	AAAATTGATTACAACAAAAC+AGG	+	chr5.1:59400755-59400774	None:intergenic	20.0%
!!	AAATTGATTACAACAAAACA+GGG	+	chr5.1:59400754-59400773	None:intergenic	20.0%
!!	AATGAGAAAATAAGTTACAT+TGG	-	chr5.1:59400049-59400068	MS.gene017308:CDS	20.0%
!!!	AGTGTTTTCTATTTTTGTAT+CGG	-	chr5.1:59400686-59400705	MS.gene017308:intron	20.0%
!!!	CTATTTTTGCATTTGAAAAA+CGG	+	chr5.1:59400660-59400679	None:intergenic	20.0%
!!!	TCTCATATCAAATTTTCTTA+TGG	-	chr5.1:59400190-59400209	MS.gene017308:CDS	20.0%
!!!	TTCTTTTGTTGTTGTTTAAA+TGG	-	chr5.1:59399688-59399707	MS.gene017308:intron	20.0%
!!!	TTTATCATTGATTAATGTGT+TGG	-	chr5.1:59400831-59400850	MS.gene017308:intron	20.0%
!	AAATAAGTTACATTGGAAAG+AGG	-	chr5.1:59400056-59400075	MS.gene017308:CDS	25.0%
!	AACAAAAGAAAACAGTTCAA+AGG	+	chr5.1:59399678-59399697	None:intergenic	25.0%
!	TTTCATCATTAGATTTGATG+TGG	+	chr5.1:59400231-59400250	None:intergenic	25.0%
!!	AATAATAGAGCTACACTTTT+GGG	-	chr5.1:59400295-59400314	MS.gene017308:CDS	25.0%
!!	ATAGATATGATATATTGGCT+AGG	-	chr5.1:59400368-59400387	MS.gene017308:CDS	25.0%
!!	ATTTTTATAAAGACCTTGAC+CGG	-	chr5.1:59400874-59400893	MS.gene017308:intron	25.0%
!!	TTGTTGTAATCAATTTTGCA+AGG	-	chr5.1:59400758-59400777	MS.gene017308:intron	25.0%
!!!	TGAAATCATTGTTTTTCAAG+AGG	-	chr5.1:59400246-59400265	MS.gene017308:CDS	25.0%
	AAGAACCAAATGGAATCAAA+AGG	+	chr5.1:59400474-59400493	None:intergenic	30.0%
	AGAAGATTCTTTACAAGGAA+GGG	-	chr5.1:59400950-59400969	MS.gene017308:intron	30.0%
	AGACAAAATAGTCAATGTGA+AGG	-	chr5.1:59400927-59400946	MS.gene017308:intron	30.0%
	AGATAGCAATAGATTCTCAA+TGG	+	chr5.1:59399993-59400012	None:intergenic	30.0%
	AGATTTGATGTGGACAATTA+AGG	+	chr5.1:59400221-59400240	None:intergenic	30.0%
	CAAATCAAAGAAAAGGAGAT+AGG	+	chr5.1:59400556-59400575	None:intergenic	30.0%
	TAAAAAATGTTGCATGCTGA+AGG	-	chr5.1:59399639-59399658	MS.gene017308:intron	30.0%
	TCATTTATGCAGTATGTTTC+TGG	-	chr5.1:59399530-59399549	MS.gene017308:CDS	30.0%
	TGGAAGTTATGCAAATTTCT+AGG	+	chr5.1:59400510-59400529	None:intergenic	30.0%
	TTAGACAATGAAACATTTGC+AGG	+	chr5.1:59399845-59399864	None:intergenic	30.0%
!	CAATAATAGAGCTACACTTT+TGG	-	chr5.1:59400294-59400313	MS.gene017308:CDS	30.0%
!	TTTTTGACACCATTTTGCAA+GGG	-	chr5.1:59400787-59400806	MS.gene017308:intron	30.0%
!!!	GTTTTTCAAGAGGAAAATGA+TGG	-	chr5.1:59400256-59400275	MS.gene017308:CDS	30.0%
!!!	TTTTTTGACACCATTTTGCA+AGG	-	chr5.1:59400786-59400805	MS.gene017308:intron	30.0%
	AAGCATTTCAGCGATAAACA+CGG	-	chr5.1:59400163-59400182	MS.gene017308:CDS	35.0%
	AGAACAAAACCCTTGCAAAA+TGG	+	chr5.1:59400799-59400818	None:intergenic	35.0%
	ATCAAAGAAAAGGAGATAGG+AGG	+	chr5.1:59400553-59400572	None:intergenic	35.0%
	ATTAACTATTCCCGTCTTTC+AGG	-	chr5.1:59399446-59399465	MS.gene017308:CDS	35.0%
	CTTCTCTTGGATGTTGTAAT+TGG	+	chr5.1:59401040-59401059	None:intergenic	35.0%
	GAAGGAGAAGATTCTTTACA+AGG	-	chr5.1:59400945-59400964	MS.gene017308:intron	35.0%
	GAGAAGATTCTTTACAAGGA+AGG	-	chr5.1:59400949-59400968	MS.gene017308:intron	35.0%
	GTTGCAATACAGTGTGATAA+CGG	-	chr5.1:59399884-59399903	MS.gene017308:intron	35.0%
	TGAAAGACGGGAATAGTTAA+TGG	+	chr5.1:59399447-59399466	None:intergenic	35.0%
	TGAAATGCATACCTGAAAGA+CGG	+	chr5.1:59399460-59399479	None:intergenic	35.0%
	TTGGATGTTGTAATTGGCAA+GGG	+	chr5.1:59401034-59401053	None:intergenic	35.0%
!	GATTAATGTGTTGGCAATTG+CGG	-	chr5.1:59400840-59400859	MS.gene017308:intron	35.0%
!	GCTGTAAATATTTGCTGCAT+TGG	-	chr5.1:59400322-59400341	MS.gene017308:CDS	35.0%
!	TGCAGCAATCAAGCAATTTT+GGG	+	chr5.1:59399413-59399432	None:intergenic	35.0%
!	TTGCAACCATGTTTTGCATT+CGG	+	chr5.1:59400031-59400050	None:intergenic	35.0%
!	TTGCAGCAATCAAGCAATTT+TGG	+	chr5.1:59399414-59399433	None:intergenic	35.0%
!	TTTTCAAACTCCGAAGAGTT+TGG	+	chr5.1:59400349-59400368	None:intergenic	35.0%
!!	AGAGCTTTAGAAGAACCAAA+TGG	+	chr5.1:59400484-59400503	None:intergenic	35.0%
!!	GAGTTCCTTTTGATTCCATT+TGG	-	chr5.1:59400466-59400485	MS.gene017308:CDS	35.0%
	ACAAAGTCACAGCTTGAAAC+AGG	+	chr5.1:59400121-59400140	None:intergenic	40.0%
	AGCATTTCAGCGATAAACAC+GGG	-	chr5.1:59400164-59400183	MS.gene017308:CDS	40.0%
	CAAAGTCACAGCTTGAAACA+GGG	+	chr5.1:59400120-59400139	None:intergenic	40.0%
	CTACCTGCTATCCTAAACTT+GGG	-	chr5.1:59399921-59399940	MS.gene017308:intron	40.0%
	CTTGGATGTTGTAATTGGCA+AGG	+	chr5.1:59401035-59401054	None:intergenic	40.0%
	GAAATGCATACCTGAAAGAC+GGG	+	chr5.1:59399459-59399478	None:intergenic	40.0%
	GAGTTGTGAAAGTAACACGT+TGG	+	chr5.1:59400438-59400457	None:intergenic	40.0%
	GTCTGAACTATTAACCCTCA+GGG	+	chr5.1:59400911-59400930	None:intergenic	40.0%
	TCATGTCCGAATGCAAAACA+TGG	-	chr5.1:59400022-59400041	MS.gene017308:CDS	40.0%
	TCTACCTGCTATCCTAAACT+TGG	-	chr5.1:59399920-59399939	MS.gene017308:intron	40.0%
	TGGAATCAAAAGGAACTCTG+AGG	+	chr5.1:59400464-59400483	None:intergenic	40.0%
	TGTCTGAACTATTAACCCTC+AGG	+	chr5.1:59400912-59400931	None:intergenic	40.0%
	TTACAAGGAAGGGATATCAG+TGG	-	chr5.1:59400960-59400979	MS.gene017308:intron	40.0%
!	ATCAAAAGGAACTCTGAGGA+AGG	+	chr5.1:59400460-59400479	None:intergenic	40.0%
!	GAAATTGCACTCTTTTGCGA+AGG	-	chr5.1:59400408-59400427	MS.gene017308:CDS	40.0%
!!	GCAATCAAGCAATTTTGGGT+TGG	+	chr5.1:59399409-59399428	None:intergenic	40.0%
!!	TTTGGGTTGGAAATCATCAG+AGG	+	chr5.1:59399396-59399415	None:intergenic	40.0%
	AGATACGCAACAAGCACTTG+TGG	+	chr5.1:59399955-59399974	None:intergenic	45.0%
	CAGCAAATATCAGACTCTGC+TGG	+	chr5.1:59400987-59401006	None:intergenic	45.0%
	CAGCAGAGTCTGATATTTGC+TGG	-	chr5.1:59400985-59401004	MS.gene017308:intron	45.0%
	CCTCAGGGAGATAATCTTTC+CGG	+	chr5.1:59400896-59400915	None:intergenic	45.0%
	CGGAAAGATTATCTCCCTGA+GGG	-	chr5.1:59400894-59400913	MS.gene017308:intron	45.0%
	GCATTTCAGCGATAAACACG+GGG	-	chr5.1:59400165-59400184	MS.gene017308:CDS	45.0%
	GGAGATAATCTTTCCGGTCA+AGG	+	chr5.1:59400890-59400909	None:intergenic	45.0%
	TACCATGGACATGGGGTATA+TGG	+	chr5.1:59400530-59400549	None:intergenic	45.0%
	TGGCACTTGTTCCCAAGTTT+AGG	+	chr5.1:59399935-59399954	None:intergenic	45.0%
	TTCCATATACCCCATGTCCA+TGG	-	chr5.1:59400525-59400544	MS.gene017308:CDS	45.0%
!	ATTTGCTGGTAAGCGACTAG+AGG	-	chr5.1:59400999-59401018	MS.gene017308:intron	45.0%
!	CTGCATTGGTCCAAACTCTT+CGG	-	chr5.1:59400336-59400355	MS.gene017308:CDS	45.0%
!	GTTCCCAAGTTTAGGATAGC+AGG	+	chr5.1:59399927-59399946	None:intergenic	45.0%
!!	AAAGGAGATAGGAGGTACCA+TGG	+	chr5.1:59400545-59400564	None:intergenic	45.0%
!!	ATAGGAGGTACCATGGACAT+GGG	+	chr5.1:59400538-59400557	None:intergenic	45.0%
	CCGGAAAGATTATCTCCCTG+AGG	-	chr5.1:59400893-59400912	MS.gene017308:intron	50.0%
	CTTGAAACAGGGCAGCAACA+TGG	+	chr5.1:59400109-59400128	None:intergenic	50.0%
!	GGTCGATGGTTGACTTCTCT+TGG	+	chr5.1:59401053-59401072	None:intergenic	50.0%
!!	GATAGGAGGTACCATGGACA+TGG	+	chr5.1:59400539-59400558	None:intergenic	50.0%
!!	TAGGAGGTACCATGGACATG+GGG	+	chr5.1:59400537-59400556	None:intergenic	50.0%
	ACCTCATCCTCCGCCTCATT+GGG	-	chr5.1:59401070-59401089	MS.gene017308:CDS	55.0%
	CAGGGCAGCAACATGGCACA+TGG	+	chr5.1:59400102-59400121	None:intergenic	60.0%
	GACCTCATCCTCCGCCTCAT+TGG	-	chr5.1:59401069-59401088	MS.gene017308:CDS	60.0%
	TCCCAATGAGGCGGAGGATG+AGG	+	chr5.1:59401074-59401093	None:intergenic	60.0%
	GAGGCGGAGGATGAGGTCGA+TGG	+	chr5.1:59401067-59401086	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	59399387	59401098	59399387	ID=MS.gene017308
chr5.1	mRNA	59399387	59401098	59399387	ID=MS.gene017308.t1;Parent=MS.gene017308
chr5.1	exon	59401018	59401098	59401018	ID=MS.gene017308.t1.exon1;Parent=MS.gene017308.t1
chr5.1	CDS	59401018	59401098	59401018	ID=cds.MS.gene017308.t1;Parent=MS.gene017308.t1
chr5.1	exon	59399939	59400589	59399939	ID=MS.gene017308.t1.exon2;Parent=MS.gene017308.t1
chr5.1	CDS	59399939	59400589	59399939	ID=cds.MS.gene017308.t1;Parent=MS.gene017308.t1
chr5.1	exon	59399387	59399617	59399387	ID=MS.gene017308.t1.exon3;Parent=MS.gene017308.t1
chr5.1	CDS	59399387	59399617	59399387	ID=cds.MS.gene017308.t1;Parent=MS.gene017308.t1

Gene Sequence

>MS.gene017308

ATGGAGCCTCTGATGATTTCCAACCCAAAATTGCTTGATTGCTGCAATTGTTCTCAGCCATTAACTATTCCCGTCTTTCAGGTATGCATTTCACTTTCTTTTTAATAAGTTATTTCTGACGTATGAGAAGAGTTAATTTGTTGTCATTTATGCAGTATGTTTCTGGTCATTAAATTTGATACTATTTTCTATTATATTTCAATATTTTCAGATGGACTATTCAAAACTGCAAATTTTCTAATGTTTTTTATGTAAAAAATGTTGCATGCTGAAGGAAACTTGATTGTTCCTTTGAACTGTTTTCTTTTGTTGTTGTTTAAATGGTGATTATCTATGATAAATCTATGCACTCTTTATTATTGTACCTTTTTTAATGTAAAAAGTTGTAGCTCTATAGTTTGTTCGAATTGAAGAAAATAAAGAAAAAGGGAACATATGTTTTATTTTATTTTATTCCTGCAAATGTTTCATTGTCTAATTTGATTATTTTCTTTTATGTTGCAATACAGTGTGATAACGGTCATATTGTTTGCTCTACCTGCTATCCTAAACTTGGGAACAAGTGCCACAAGTGCTTGTTGCGTATCTCAAAACGTTGTAAAGCCATTGAGAATCTATTGCTATCTATTAAAATGTCATGTCCGAATGCAAAACATGGTTGCAATGAGAAAATAAGTTACATTGGAAAGAGGAAGCATGAAGAAGAATGCATCCATGTGCCATGTTGCTGCCCTGTTTCAAGCTGTGACTTTGTTGCATCATCAGAAGTGCTGTCTAAGCATTTCAGCGATAAACACGGGGATTCTCATATCAAATTTTCTTATGGTCACTCCTTAATTGTCCACATCAAATCTAATGATGAAATCATTGTTTTTCAAGAGGAAAATGATGGCAAACTATTTATTCTCAATAATAGAGCTACACTTTTGGGAAATGCTGTAAATATTTGCTGCATTGGTCCAAACTCTTCGGAGTTTGAAAATAGATATGATATATTGGCTAGGTCTCAGATGTGCAAACTGAAATTGCACTCTTTTGCGAAGGATGTCCAACGTGTTACTTTCACAACTCCTTCCTCAGAGTTCCTTTTGATTCCATTTGGTTCTTCTAAAGCTCTCGACCTAGAAATTTGCATAACTTCCATATACCCCATGTCCATGGTACCTCCTATCTCCTTTTCTTTGATTTGTTTATTTTTTCTTCGTATTAAAGTCTTATTATTTTCTTTTAAATTTTGAATTTATACTCTAGCATTTTATCTGAAATTCATCCGTTTTTCAAATGCAAAAATAGCTTGTTAGTGTTTTCTATTTTTGTATCGGTCTCAAATTTTCTTTTGTTGATTTGATCTTGAATTTCTTTTTCCCTGTTTTGTTGTAATCAATTTTGCAAGGTTTTTTTTTTTGACACCATTTTGCAAGGGTTTTGTTCTCTTTCTGCTGCTTTTATCATTGATTAATGTGTTGGCAATTGCGGTGCAGATGAAAATTTTTATAAAGACCTTGACCGGAAAGATTATCTCCCTGAGGGTTAATAGTTCAGACAAAATAGTCAATGTGAAGGAGAAGATTCTTTACAAGGAAGGGATATCAGTGGACCAGCAGAGTCTGATATTTGCTGGTAAGCGACTAGAGGACAAGCTTACCCTTGCCAATTACAACATCCAAGAGAAGTCAACCATCGACCTCATCCTCCGCCTCATTGGGAGCTAG

Protein sequence

>MS.gene017308.t1

MEPLMISNPKLLDCCNCSQPLTIPVFQCDNGHIVCSTCYPKLGNKCHKCLLRISKRCKAIENLLLSIKMSCPNAKHGCNEKISYIGKRKHEEECIHVPCCCPVSSCDFVASSEVLSKHFSDKHGDSHIKFSYGHSLIVHIKSNDEIIVFQEENDGKLFILNNRATLLGNAVNICCIGPNSSEFENRYDILARSQMCKLKLHSFAKDVQRVTFTTPSSEFLLIPFGSSKALDLEICITSIYPMSMMKIFIKTLTGKIISLRVNSSDKIVNVKEKILYKEGISVDQQSLIFAGKRLEDKLTLANYNIQEKSTIDLILRLIGS