Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009559.t1 | RHN56826.1 | 56.7 | 353 | 37 | 2 | 115 | 351 | 1 | 353 | 3.80E-91 | 345.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009559.t1 | Q39256 | 61.3 | 75 | 29 | 0 | 276 | 350 | 79 | 153 | 7.6e-16 | 86.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009559.t1 | A0A396HU02 | 56.7 | 353 | 37 | 2 | 115 | 351 | 1 | 353 | 2.7e-91 | 345.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009559.t1 | MTR_5g076720 | 52.688 | 372 | 120 | 8 | 9 | 351 | 46 | 390 | 4.13e-107 | 319 |
MS.gene009559.t1 | MTR_5g076720 | 69.697 | 66 | 19 | 1 | 117 | 181 | 40 | 105 | 1.38e-20 | 92.4 |
MS.gene009559.t1 | MTR_1g046640 | 65.922 | 179 | 58 | 1 | 173 | 351 | 140 | 315 | 7.31e-75 | 234 |
MS.gene009559.t1 | MTR_5g076810 | 65.385 | 182 | 59 | 2 | 170 | 350 | 91 | 269 | 1.41e-73 | 229 |
MS.gene009559.t1 | MTR_2g038420 | 61.622 | 185 | 69 | 1 | 169 | 351 | 151 | 335 | 2.61e-68 | 218 |
MS.gene009559.t1 | MTR_1g046650 | 61.453 | 179 | 66 | 1 | 173 | 351 | 71 | 246 | 3.50e-68 | 214 |
MS.gene009559.t1 | MTR_2g038430 | 59.788 | 189 | 66 | 1 | 173 | 351 | 155 | 343 | 6.47e-68 | 217 |
MS.gene009559.t1 | MTR_7g024290 | 63.043 | 184 | 64 | 2 | 169 | 351 | 137 | 317 | 1.24e-67 | 215 |
MS.gene009559.t1 | MTR_1g046650 | 61.453 | 179 | 66 | 1 | 173 | 351 | 140 | 315 | 2.00e-67 | 215 |
MS.gene009559.t1 | MTR_1g046650 | 61.453 | 179 | 66 | 1 | 173 | 351 | 140 | 315 | 2.58e-67 | 214 |
MS.gene009559.t1 | MTR_5g067400 | 63.483 | 178 | 62 | 1 | 173 | 350 | 141 | 315 | 3.45e-67 | 214 |
MS.gene009559.t1 | MTR_1g046650 | 61.453 | 179 | 66 | 1 | 173 | 351 | 171 | 346 | 6.88e-67 | 214 |
MS.gene009559.t1 | MTR_5g076505 | 56.284 | 183 | 80 | 0 | 169 | 351 | 133 | 315 | 2.37e-63 | 204 |
MS.gene009559.t1 | MTR_7g094390 | 59.016 | 183 | 72 | 1 | 169 | 351 | 298 | 477 | 1.09e-62 | 207 |
MS.gene009559.t1 | MTR_5g061290 | 54.595 | 185 | 82 | 1 | 169 | 351 | 143 | 327 | 9.63e-61 | 198 |
MS.gene009559.t1 | MTR_5g076520 | 57.143 | 182 | 75 | 2 | 173 | 351 | 141 | 322 | 8.85e-60 | 195 |
MS.gene009559.t1 | MTR_5g076660 | 57.955 | 176 | 68 | 2 | 176 | 348 | 166 | 338 | 2.15e-56 | 187 |
MS.gene009559.t1 | MTR_5g076370 | 55.307 | 179 | 74 | 2 | 173 | 348 | 164 | 339 | 1.15e-55 | 185 |
MS.gene009559.t1 | MTR_5g076820 | 61.765 | 136 | 49 | 2 | 173 | 306 | 148 | 282 | 3.03e-45 | 157 |
MS.gene009559.t1 | MTR_5g077020 | 69.697 | 99 | 29 | 1 | 173 | 270 | 109 | 207 | 3.42e-37 | 134 |
MS.gene009559.t1 | MTR_5g076540 | 63.736 | 91 | 33 | 0 | 169 | 259 | 137 | 227 | 2.35e-31 | 119 |
MS.gene009559.t1 | MTR_7g105080 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 6.73e-22 | 90.1 |
MS.gene009559.t1 | MTR_3g092130 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 6.73e-22 | 90.1 |
MS.gene009559.t1 | MTR_1g059690 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 6.73e-22 | 90.1 |
MS.gene009559.t1 | MTR_5g092700 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.04e-21 | 90.5 |
MS.gene009559.t1 | MTR_4g073580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.04e-21 | 90.5 |
MS.gene009559.t1 | MTR_3g092130 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.25e-21 | 89.7 |
MS.gene009559.t1 | MTR_8g088060 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.19e-21 | 89.7 |
MS.gene009559.t1 | MTR_5g033960 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.50e-21 | 89.4 |
MS.gene009559.t1 | MTR_4g073580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 3.41e-21 | 90.1 |
MS.gene009559.t1 | MTR_7g116360 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 5.80e-21 | 90.5 |
MS.gene009559.t1 | MTR_7g116360 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 5.80e-21 | 90.5 |
MS.gene009559.t1 | MTR_7g116360 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 5.80e-21 | 90.5 |
MS.gene009559.t1 | MTR_4g088485 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 6.49e-21 | 90.1 |
MS.gene009559.t1 | MTR_4g088485 | 62.667 | 75 | 28 | 0 | 276 | 350 | 138 | 212 | 6.49e-21 | 90.1 |
MS.gene009559.t1 | MTR_4g088485 | 54.667 | 75 | 19 | 1 | 276 | 350 | 77 | 136 | 1.99e-15 | 74.7 |
MS.gene009559.t1 | MTR_1g066390 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 6.60e-21 | 90.5 |
MS.gene009559.t1 | MTR_1g066390 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 6.60e-21 | 90.5 |
MS.gene009559.t1 | MTR_1g066390 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 6.60e-21 | 90.5 |
MS.gene009559.t1 | MTR_7g116360 | 61.842 | 76 | 29 | 0 | 275 | 350 | 48 | 123 | 1.39e-20 | 90.5 |
MS.gene009559.t1 | MTR_7g116360 | 62.667 | 75 | 28 | 0 | 276 | 350 | 125 | 199 | 2.42e-20 | 89.7 |
MS.gene009559.t1 | MTR_7g116360 | 62.667 | 75 | 28 | 0 | 276 | 350 | 201 | 275 | 2.42e-20 | 89.7 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.70e-20 | 90.1 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 1.70e-20 | 90.1 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 1.70e-20 | 90.1 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.09e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 2.09e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 2.09e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 2.09e-20 | 90.5 |
MS.gene009559.t1 | MTR_6g061930 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.72e-20 | 90.1 |
MS.gene009559.t1 | MTR_6g061930 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 2.72e-20 | 90.1 |
MS.gene009559.t1 | MTR_6g061930 | 62.667 | 75 | 28 | 0 | 276 | 350 | 214 | 288 | 2.72e-20 | 90.1 |
MS.gene009559.t1 | MTR_6g061930 | 54.667 | 75 | 19 | 1 | 276 | 350 | 153 | 212 | 7.34e-16 | 77.4 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 3.06e-20 | 89.7 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 3.06e-20 | 89.7 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 3.06e-20 | 89.7 |
MS.gene009559.t1 | MTR_4g080920 | 61.333 | 75 | 29 | 0 | 276 | 350 | 77 | 151 | 3.29e-20 | 88.6 |
MS.gene009559.t1 | MTR_4g080920 | 61.333 | 75 | 29 | 0 | 276 | 350 | 1 | 75 | 7.55e-20 | 87.4 |
MS.gene009559.t1 | MTR_4g080920 | 49.333 | 75 | 38 | 0 | 276 | 350 | 153 | 227 | 2.38e-14 | 72.0 |
MS.gene009559.t1 | MTR_8g081020 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 4.37e-20 | 90.9 |
MS.gene009559.t1 | MTR_8g081020 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 4.37e-20 | 90.9 |
MS.gene009559.t1 | MTR_8g081020 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 4.37e-20 | 90.9 |
MS.gene009559.t1 | MTR_8g081020 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 4.37e-20 | 90.9 |
MS.gene009559.t1 | MTR_8g081020 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 4.37e-20 | 90.9 |
MS.gene009559.t1 | MTR_4g091580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 4.45e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 4.45e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 4.45e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 4.45e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 276 | 350 | 229 | 303 | 1.40e-19 | 89.4 |
MS.gene009559.t1 | MTR_4g080797 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 4.49e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g080797 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 4.49e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g080797 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 4.49e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g080797 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 4.49e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g080797 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 4.49e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 4.49e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 4.49e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 4.49e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 4.49e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 4.49e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 4.67e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 4.67e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 4.67e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 4.67e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 4.67e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 381 | 455 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 381 | 455 | 7.55e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 61.333 | 75 | 29 | 0 | 276 | 350 | 305 | 379 | 9.46e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 381 | 455 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g091580 | 62.667 | 75 | 28 | 0 | 276 | 350 | 457 | 531 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 381 | 455 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_8g018230 | 62.667 | 75 | 28 | 0 | 276 | 350 | 457 | 531 | 9.82e-20 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.02e-19 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 1.02e-19 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 1.02e-19 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 1.02e-19 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 1.02e-19 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 381 | 455 | 1.02e-19 | 90.5 |
MS.gene009559.t1 | MTR_4g081010 | 62.667 | 75 | 28 | 0 | 276 | 350 | 457 | 531 | 1.02e-19 | 90.5 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 1.26e-19 | 90.9 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 1.26e-19 | 90.9 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 1.26e-19 | 90.9 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 1.26e-19 | 90.9 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 381 | 455 | 1.26e-19 | 90.9 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 457 | 531 | 1.26e-19 | 90.9 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 533 | 607 | 1.26e-19 | 90.9 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 609 | 683 | 1.26e-19 | 90.9 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 685 | 759 | 1.26e-19 | 90.9 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 761 | 835 | 1.26e-19 | 90.9 |
MS.gene009559.t1 | MTR_4g088495 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.63e-19 | 90.5 |
MS.gene009559.t1 | MTR_5g076680 | 75.472 | 53 | 12 | 1 | 123 | 174 | 10 | 62 | 1.14e-18 | 82.8 |
MS.gene009559.t1 | MTR_4g058025 | 67.241 | 58 | 19 | 0 | 169 | 226 | 71 | 128 | 1.23e-17 | 80.5 |
MS.gene009559.t1 | MTR_5g061310 | 48.684 | 76 | 39 | 0 | 276 | 351 | 2 | 77 | 5.69e-17 | 75.1 |
MS.gene009559.t1 | MTR_8g479250 | 58.537 | 82 | 34 | 0 | 269 | 350 | 134 | 215 | 2.78e-16 | 78.6 |
MS.gene009559.t1 | MTR_8g479250 | 52.778 | 72 | 23 | 1 | 276 | 347 | 217 | 277 | 4.01e-13 | 69.3 |
MS.gene009559.t1 | MTR_4g009980 | 50.000 | 68 | 34 | 0 | 284 | 351 | 4 | 71 | 1.48e-13 | 65.5 |
MS.gene009559.t1 | MTR_5g076350 | 45.455 | 77 | 41 | 1 | 276 | 351 | 8 | 84 | 1.34e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009559.t1 | AT3G52590 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.12e-21 | 89.7 |
MS.gene009559.t1 | AT2G36170 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.12e-21 | 89.7 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.15e-21 | 90.5 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 1.15e-21 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.15e-21 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 1.15e-21 | 90.5 |
MS.gene009559.t1 | AT2G35635 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.84e-21 | 89.7 |
MS.gene009559.t1 | AT1G23410 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 1.96e-21 | 89.7 |
MS.gene009559.t1 | AT1G31340 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.06e-21 | 89.7 |
MS.gene009559.t1 | AT2G47110 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.44e-21 | 89.7 |
MS.gene009559.t1 | AT2G47110 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.44e-21 | 89.7 |
MS.gene009559.t1 | AT3G62250 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.54e-21 | 89.7 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G05050 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 6.07e-21 | 90.5 |
MS.gene009559.t1 | AT5G37640 | 62.667 | 75 | 28 | 0 | 276 | 350 | 79 | 153 | 1.72e-20 | 91.3 |
MS.gene009559.t1 | AT5G37640 | 60.000 | 75 | 30 | 0 | 276 | 350 | 155 | 229 | 4.33e-18 | 84.3 |
MS.gene009559.t1 | AT5G37640 | 60.526 | 76 | 29 | 1 | 276 | 350 | 231 | 306 | 1.21e-16 | 80.1 |
MS.gene009559.t1 | AT5G37640 | 53.333 | 75 | 35 | 0 | 276 | 350 | 3 | 77 | 4.46e-15 | 75.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G03240 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G20620 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G20620 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G20620 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT5G20620 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 2.03e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT4G02890 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 2.04e-20 | 90.5 |
MS.gene009559.t1 | AT1G55060 | 61.333 | 75 | 29 | 0 | 276 | 350 | 77 | 151 | 2.09e-20 | 89.0 |
MS.gene009559.t1 | AT1G55060 | 60.000 | 75 | 30 | 0 | 276 | 350 | 153 | 227 | 1.47e-18 | 84.0 |
MS.gene009559.t1 | AT1G55060 | 57.333 | 75 | 32 | 0 | 276 | 350 | 1 | 75 | 3.28e-18 | 82.8 |
MS.gene009559.t1 | AT1G65350 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 2.52e-20 | 90.5 |
MS.gene009559.t1 | AT1G65350 | 62.667 | 75 | 28 | 0 | 276 | 350 | 152 | 226 | 7.18e-20 | 89.4 |
MS.gene009559.t1 | AT1G65350 | 61.333 | 75 | 28 | 1 | 276 | 350 | 77 | 150 | 1.36e-17 | 82.8 |
MS.gene009559.t1 | AT1G65350 | 51.685 | 89 | 29 | 1 | 276 | 350 | 228 | 316 | 3.70e-15 | 75.9 |
MS.gene009559.t1 | AT5G20620 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 4.61e-20 | 90.9 |
MS.gene009559.t1 | AT5G20620 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 4.61e-20 | 90.9 |
MS.gene009559.t1 | AT5G20620 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 4.61e-20 | 90.9 |
MS.gene009559.t1 | AT5G20620 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 4.61e-20 | 90.9 |
MS.gene009559.t1 | AT5G20620 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 4.61e-20 | 90.9 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 4.71e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 381 | 455 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 1 | 75 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 77 | 151 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 153 | 227 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 229 | 303 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 305 | 379 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT4G05320 | 62.667 | 75 | 28 | 0 | 276 | 350 | 381 | 455 | 7.91e-20 | 90.5 |
MS.gene009559.t1 | AT3G09790 | 61.333 | 75 | 29 | 0 | 276 | 350 | 79 | 153 | 5.15e-18 | 85.9 |
MS.gene009559.t1 | AT3G09790 | 57.333 | 75 | 32 | 0 | 276 | 350 | 3 | 77 | 2.19e-16 | 80.9 |
MS.gene009559.t1 | AT3G09790 | 50.685 | 73 | 36 | 0 | 276 | 348 | 552 | 624 | 8.24e-12 | 67.0 |
MS.gene009559.t1 | AT3G09790 | 50.725 | 69 | 34 | 0 | 276 | 344 | 393 | 461 | 6.68e-11 | 63.9 |
MS.gene009559.t1 | AT3G09790 | 61.333 | 75 | 29 | 0 | 276 | 350 | 79 | 153 | 5.15e-18 | 85.9 |
MS.gene009559.t1 | AT3G09790 | 57.333 | 75 | 32 | 0 | 276 | 350 | 3 | 77 | 2.19e-16 | 80.9 |
MS.gene009559.t1 | AT3G09790 | 50.685 | 73 | 36 | 0 | 276 | 348 | 552 | 624 | 8.24e-12 | 67.0 |
MS.gene009559.t1 | AT3G09790 | 50.725 | 69 | 34 | 0 | 276 | 344 | 393 | 461 | 6.68e-11 | 63.9 |
MS.gene009559.t1 | AT1G53930 | 46.575 | 73 | 39 | 0 | 276 | 348 | 86 | 158 | 5.18e-13 | 66.6 |
MS.gene009559.t1 | AT1G53950 | 41.333 | 75 | 44 | 0 | 276 | 350 | 69 | 143 | 2.47e-11 | 61.6 |
Find 67 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCAGCACTCAAGCAAATT+AGG | 0.141972 | 5.3:-62197170 | None:intergenic |
CACCTTGTCCTCCGCCTCCT+TGG | 0.233407 | 5.3:+62198880 | MS.gene009559:CDS |
ACCTTGTCCTCCGCCTCCTT+GGG | 0.242433 | 5.3:+62198881 | MS.gene009559:CDS |
AATGATCTCTTCACCGTCTT+TGG | 0.245255 | 5.3:-62195115 | None:intergenic |
TTTGAGAATCCCCGTGTTTA+TGG | 0.252861 | 5.3:-62196733 | None:intergenic |
AGTAACCCGTTGGACATTCT+TGG | 0.294714 | 5.3:-62198376 | None:intergenic |
ACAGAGAAACTAGAAATTAT+AGG | 0.298509 | 5.3:-62196941 | None:intergenic |
AAAATCATTTCTTTCACTTT+GGG | 0.305287 | 5.3:-62198748 | None:intergenic |
GCTGTCAATATTTGCTGCTT+TGG | 0.309542 | 5.3:+62198273 | MS.gene009559:CDS |
AATAATAGTACTATGTTGTT+AGG | 0.345128 | 5.3:+62198246 | MS.gene009559:CDS |
ATCTATGTAAAGGGTCTAGA+TGG | 0.375383 | 5.3:+62198685 | MS.gene009559:CDS |
TGCAGCACTCAAGCAAATTA+GGG | 0.375478 | 5.3:-62197169 | None:intergenic |
TGCAGATTACAACGTCAAAA+AGG | 0.375617 | 5.3:+62198846 | MS.gene009559:CDS |
GAAAATCATTTCTTTCACTT+TGG | 0.385655 | 5.3:-62198749 | None:intergenic |
AGCTTGTATGAAGCAAAATA+TGG | 0.386220 | 5.3:-62196836 | None:intergenic |
GAGTTCCTTGTGATTCCATT+TGG | 0.390707 | 5.3:+62198417 | MS.gene009559:CDS |
AAAATATGGCCACATACGTC+TGG | 0.391341 | 5.3:-62196822 | None:intergenic |
ATCAGACGTTGGGCGTGCAC+TGG | 0.398715 | 5.3:-62198787 | None:intergenic |
GCCCAACGTCTGATCTTTGC+TGG | 0.415935 | 5.3:+62198796 | MS.gene009559:CDS |
GATGTGTACTTTGGCACATT+TGG | 0.430857 | 5.3:-62196900 | None:intergenic |
ACAGAGAAACTAGAAAATAT+AGG | 0.444564 | 5.3:-62194961 | None:intergenic |
GTATGCAACTCGATGGCAAC+CGG | 0.449827 | 5.3:+62198818 | MS.gene009559:CDS |
CGTTGTAATCTGCAAGGGTC+CGG | 0.457118 | 5.3:-62198837 | None:intergenic |
GGAGGCGGAGGACAAGGTGG+AGG | 0.482575 | 5.3:-62198876 | None:intergenic |
CCCCAAGGAGGCGGAGGACA+AGG | 0.483914 | 5.3:-62198882 | None:intergenic |
GCAGATGCAAATCTATGTAA+AGG | 0.490691 | 5.3:+62198675 | MS.gene009559:intron |
TACTCAGACTCAGAAGCGTC+TGG | 0.490998 | 5.3:-62198297 | None:intergenic |
GTTGCTACCGATGTGTACTT+TGG | 0.491765 | 5.3:-62196909 | None:intergenic |
TGAGTATAGTTACGATATGT+TGG | 0.492716 | 5.3:+62198314 | MS.gene009559:CDS |
CAGATGCAAATCTATGTAAA+GGG | 0.507120 | 5.3:+62198676 | MS.gene009559:intron |
ACCAGCAAAGATCAGACGTT+GGG | 0.512651 | 5.3:-62198797 | None:intergenic |
CTGCAAAGCCCAGACGTATG+TGG | 0.515582 | 5.3:+62196813 | MS.gene009559:CDS |
TTCTCAAATCAAATCTAAAG+TGG | 0.518276 | 5.3:+62196748 | MS.gene009559:CDS |
ACTATTAGGCAAAAGATGAA+AGG | 0.524334 | 5.3:+62195082 | MS.gene009559:intron |
AGAGGTTCGAAAGAACCAAA+TGG | 0.528774 | 5.3:-62198432 | None:intergenic |
CTATTAGGCAAAAGATGAAA+GGG | 0.530183 | 5.3:+62195083 | MS.gene009559:intron |
TCAGACGTTGGGCGTGCACT+GGG | 0.537871 | 5.3:-62198786 | None:intergenic |
AATGGAATCACAAGGAACTC+TGG | 0.539435 | 5.3:-62198414 | None:intergenic |
TCTAGTCCCCAAGGAGGCGG+AGG | 0.549338 | 5.3:-62198888 | None:intergenic |
GTTCTTACTAACATCTTGTA+CGG | 0.550198 | 5.3:-62195142 | None:intergenic |
GCACTCAAGCAAATTAGGGT+TGG | 0.551048 | 5.3:-62197165 | None:intergenic |
TTTGACGTTGTAATCTGCAA+GGG | 0.554769 | 5.3:-62198842 | None:intergenic |
ATGCAAATTTCTAAGTTGAG+AGG | 0.555054 | 5.3:-62198450 | None:intergenic |
TTGACGTTAAGAGTTCATAC+AGG | 0.555320 | 5.3:+62198722 | MS.gene009559:CDS |
TGCATTTCAGCCATAAACAC+GGG | 0.562870 | 5.3:+62196723 | MS.gene009559:CDS |
TTGTGGTCATCTAGTCCCCA+AGG | 0.564975 | 5.3:-62198897 | None:intergenic |
CCTTGTCCTCCGCCTCCTTG+GGG | 0.573766 | 5.3:+62198882 | MS.gene009559:CDS |
CTATTAGGCAAAAGATGAAG+TGG | 0.582149 | 5.3:+62197064 | MS.gene009559:intron |
TCATCTAGTCCCCAAGGAGG+CGG | 0.583160 | 5.3:-62198891 | None:intergenic |
CAAGGAGGCGGAGGACAAGG+TGG | 0.596069 | 5.3:-62198879 | None:intergenic |
GATTTGCTAAAGTAACCCGT+TGG | 0.604139 | 5.3:-62198386 | None:intergenic |
AAATATGGCCACATACGTCT+GGG | 0.604553 | 5.3:-62196821 | None:intergenic |
TGAAACCATTGTTCTTCGAG+AGG | 0.606566 | 5.3:+62198197 | MS.gene009559:CDS |
AGGGAGACATGCACCAAAGA+CGG | 0.606619 | 5.3:+62195102 | MS.gene009559:CDS |
GAGGCGGAGGACAAGGTGGA+GGG | 0.612344 | 5.3:-62198875 | None:intergenic |
ATGCATTTCAGCCATAAACA+CGG | 0.617311 | 5.3:+62196722 | MS.gene009559:CDS |
TTTGCTGGTATGCAACTCGA+TGG | 0.631021 | 5.3:+62198811 | MS.gene009559:CDS |
GGGTCTAGATGGAAAGACAA+TGG | 0.637376 | 5.3:+62198696 | MS.gene009559:CDS |
TGTATGAACTCTTAACGTCA+AGG | 0.640853 | 5.3:-62198720 | None:intergenic |
GTTGGAAATCACAAGAGGAA+CGG | 0.646160 | 5.3:-62197147 | None:intergenic |
TACCAGCAAAGATCAGACGT+TGG | 0.660071 | 5.3:-62198798 | None:intergenic |
TTAGGGTTGGAAATCACAAG+AGG | 0.666490 | 5.3:-62197152 | None:intergenic |
AAGAACCAAATGGAATCACA+AGG | 0.686822 | 5.3:-62198422 | None:intergenic |
AAATGTGCCAAAGTACACAT+CGG | 0.705798 | 5.3:+62196902 | MS.gene009559:CDS |
GCATTTCAGCCATAAACACG+GGG | 0.722344 | 5.3:+62196724 | MS.gene009559:CDS |
TGGTCATCTAGTCCCCAAGG+AGG | 0.725245 | 5.3:-62198894 | None:intergenic |
GGATATAGGAGGTACCCTGG+GGG | 0.726924 | 5.3:-62198484 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTAAGGATAATATTAA+AGG | + | chr5.3:62195660-62195679 | MS.gene009559:intron | 10.0% |
!!! | TTATTTTTTTAATCACTATT+AGG | + | chr5.3:62197049-62197068 | MS.gene009559:intron | 10.0% |
!! | AACTGTTAATTAGAAAATTA+AGG | + | chr5.3:62195647-62195666 | MS.gene009559:intron | 15.0% |
!! | AATATAGATATCAAAGTTTA+TGG | - | chr5.3:62196226-62196245 | None:intergenic | 15.0% |
!! | AATATAGTTATCAAAGTTAA+TGG | - | chr5.3:62197666-62197685 | None:intergenic | 15.0% |
!! | ATGAAATAAAGCTTAAATAT+AGG | - | chr5.3:62195572-62195591 | None:intergenic | 15.0% |
!! | GAAGATAATAACAATTTAAT+AGG | - | chr5.3:62198531-62198550 | None:intergenic | 15.0% |
!! | TATAAAATCTCAAAAATAGA+AGG | - | chr5.3:62196174-62196193 | None:intergenic | 15.0% |
!! | TGAAATAAAGCTTAAATATA+GGG | - | chr5.3:62195571-62195590 | None:intergenic | 15.0% |
!!! | AAGTAAGACATATATTTTTA+AGG | - | chr5.3:62196368-62196387 | None:intergenic | 15.0% |
!!! | TTGTTTTTTTAATCACTATT+AGG | + | chr5.3:62195068-62195087 | MS.gene009559:intron | 15.0% |
!! | AAAATAACAAAGCAAAGAAA+AGG | - | chr5.3:62198508-62198527 | None:intergenic | 20.0% |
!! | AAAATCATTTCTTTCACTTT+GGG | - | chr5.3:62198751-62198770 | None:intergenic | 20.0% |
!! | AATAATAGTACTATGTTGTT+AGG | + | chr5.3:62198246-62198265 | MS.gene009559:CDS | 20.0% |
!! | GAAATAAAGCTTAAATATAG+GGG | - | chr5.3:62195570-62195589 | None:intergenic | 20.0% |
!! | TCATATATGTAATATGTTTC+TGG | + | chr5.3:62195308-62195327 | MS.gene009559:intron | 20.0% |
!! | TCTTGAAATATACTAGAAAA+AGG | - | chr5.3:62195348-62195367 | None:intergenic | 20.0% |
!!! | ACAAAGACATTCTTTAAAAA+AGG | + | chr5.3:62196871-62196890 | MS.gene009559:CDS | 20.0% |
!!! | AGTAATGTCATTTTTTTTAG+AGG | - | chr5.3:62195754-62195773 | None:intergenic | 20.0% |
!!! | ATCAAAGCATTTAAAATTGT+TGG | - | chr5.3:62197478-62197497 | None:intergenic | 20.0% |
!!! | CAAAGACATTCTTTAAAAAA+GGG | + | chr5.3:62196872-62196891 | MS.gene009559:CDS | 20.0% |
!!! | TCAAAGCATTTAAAATTGTT+GGG | - | chr5.3:62197477-62197496 | None:intergenic | 20.0% |
!!! | TCATTTTTTTTAGAGGAATT+TGG | - | chr5.3:62195747-62195766 | None:intergenic | 20.0% |
!!! | TCTCAAATCAAATTTTCTTA+TGG | + | chr5.3:62198141-62198160 | MS.gene009559:intron | 20.0% |
!!! | TTTGAGATTTTATATTTGCA+TGG | + | chr5.3:62197620-62197639 | MS.gene009559:intron | 20.0% |
!!! | TTTTTAAAGAATGTCTTTGT+CGG | - | chr5.3:62196871-62196890 | None:intergenic | 20.0% |
! | AAAATGATGCATAACAAATG+AGG | + | chr5.3:62195844-62195863 | MS.gene009559:intron | 25.0% |
! | AAACAAGTCTTAAGTCTATA+AGG | - | chr5.3:62197514-62197533 | None:intergenic | 25.0% |
! | AAACAAGTCTTAAGTGTATA+AGG | - | chr5.3:62196077-62196096 | None:intergenic | 25.0% |
! | ACAAATACATACCTGAAAAA+CGG | - | chr5.3:62197219-62197238 | None:intergenic | 25.0% |
! | ACAATGCATAAAAATATGCA+AGG | + | chr5.3:62195992-62196011 | MS.gene009559:intron | 25.0% |
! | ACAGAGAAACTAGAAAATAT+AGG | - | chr5.3:62194964-62194983 | None:intergenic | 25.0% |
! | ACAGAGAAACTAGAAATTAT+AGG | - | chr5.3:62196944-62196963 | None:intergenic | 25.0% |
! | ATAAAAATATGCAAGGTTTG+GGG | + | chr5.3:62195999-62196018 | MS.gene009559:intron | 25.0% |
! | CATAAAAATATGCAAGGTTT+GGG | + | chr5.3:62195998-62196017 | MS.gene009559:intron | 25.0% |
! | GAAAATCATTTCTTTCACTT+TGG | - | chr5.3:62198752-62198771 | None:intergenic | 25.0% |
! | GATTTAATTGTACTAGAACA+AGG | + | chr5.3:62195006-62195025 | MS.gene009559:intron | 25.0% |
! | TAGAGATAGTGATCTATTTA+AGG | + | chr5.3:62195911-62195930 | MS.gene009559:intron | 25.0% |
! | TTCTCAAATCAAATCTAAAG+TGG | + | chr5.3:62196748-62196767 | MS.gene009559:CDS | 25.0% |
!! | AATCTAAAGTGGAGAAAAAT+AGG | + | chr5.3:62196759-62196778 | MS.gene009559:CDS | 25.0% |
!! | ACTCAAATTCGAAATTTTGT+TGG | - | chr5.3:62195504-62195523 | None:intergenic | 25.0% |
!! | CTATATTGTCGTAACATTTT+TGG | + | chr5.3:62197679-62197698 | MS.gene009559:intron | 25.0% |
!! | CTATATTGTTGTAGCATTTT+TGG | + | chr5.3:62196239-62196258 | MS.gene009559:intron | 25.0% |
!! | CTCAAATTCGAAATTTTGTT+GGG | - | chr5.3:62195503-62195522 | None:intergenic | 25.0% |
!! | TATACTTTTGATCACATAAC+TGG | + | chr5.3:62197776-62197795 | MS.gene009559:intron | 25.0% |
!! | TCATATATGCAATATGCTTT+TGG | + | chr5.3:62197291-62197310 | MS.gene009559:intron | 25.0% |
!! | TCTATTGTTGATCGTTTTAT+TGG | + | chr5.3:62198642-62198661 | MS.gene009559:intron | 25.0% |
!!! | CTTAGTATAATTAGCTTTGT+TGG | + | chr5.3:62196310-62196329 | MS.gene009559:intron | 25.0% |
!!! | CTTTATTTTATCATAGCCAT+TGG | + | chr5.3:62196385-62196404 | MS.gene009559:intron | 25.0% |
!!! | TAGTATGATTAGCTTTATGT+TGG | + | chr5.3:62197752-62197771 | MS.gene009559:intron | 25.0% |
!!! | TATAAATGAGGTATTGAGTA+AGG | - | chr5.3:62195531-62195550 | None:intergenic | 25.0% |
!!! | TCATCAAAGCAACTTTTTTT+TGG | - | chr5.3:62196043-62196062 | None:intergenic | 25.0% |
!!! | TTTGAGATTTTATATGTGCA+TGG | + | chr5.3:62196180-62196199 | MS.gene009559:intron | 25.0% |
ACAAATGCATACCTGAAAAA+CGG | - | chr5.3:62195241-62195260 | None:intergenic | 30.0% | |
ACTATTAGGCAAAAGATGAA+AGG | + | chr5.3:62195082-62195101 | MS.gene009559:intron | 30.0% | |
AGCTTGTATGAAGCAAAATA+TGG | - | chr5.3:62196839-62196858 | None:intergenic | 30.0% | |
CAAAGCAAAGAAAAGGATAT+AGG | - | chr5.3:62198501-62198520 | None:intergenic | 30.0% | |
CAAATACATACCTGAAAAAC+GGG | - | chr5.3:62197218-62197237 | None:intergenic | 30.0% | |
CAGATGCAAATCTATGTAAA+GGG | + | chr5.3:62198676-62198695 | MS.gene009559:intron | 30.0% | |
CTATTAGGCAAAAGATGAAA+GGG | + | chr5.3:62195083-62195102 | MS.gene009559:intron | 30.0% | |
GCATAAAAATATGCAAGGTT+TGG | + | chr5.3:62195997-62196016 | MS.gene009559:intron | 30.0% | |
GTCGGAAATTATAAAAGGAA+CGG | - | chr5.3:62195172-62195191 | None:intergenic | 30.0% | |
GTTCTTACTAACATCTTGTA+CGG | - | chr5.3:62195145-62195164 | None:intergenic | 30.0% | |
TCTTAAGTCTATAAGGCTTA+AGG | - | chr5.3:62197507-62197526 | None:intergenic | 30.0% | |
TGAAAAACGGGAATCATTAA+GGG | - | chr5.3:62197206-62197225 | None:intergenic | 30.0% | |
TGAGTATAGTTACGATATGT+TGG | + | chr5.3:62198314-62198333 | MS.gene009559:CDS | 30.0% | |
TGATAGCAATAGATTCTCAA+CGG | - | chr5.3:62197944-62197963 | None:intergenic | 30.0% | |
TGGTTAAAAGTCGAATTTGA+TGG | + | chr5.3:62196405-62196424 | MS.gene009559:intron | 30.0% | |
TGTAGGAAGTAGAAAAGAAT+GGG | + | chr5.3:62195797-62195816 | MS.gene009559:intron | 30.0% | |
TTAGGGTCGGAAATTATAAA+AGG | - | chr5.3:62195177-62195196 | None:intergenic | 30.0% | |
TTGTAGGAAGTAGAAAAGAA+TGG | + | chr5.3:62195796-62195815 | MS.gene009559:intron | 30.0% | |
! | AAGACTTGTTTGCTTTACAT+TGG | + | chr5.3:62196086-62196105 | MS.gene009559:intron | 30.0% |
! | AATCACTAACAACACGTTTT+TGG | - | chr5.3:62198614-62198633 | None:intergenic | 30.0% |
! | AGACTTGTTTGCTTTACATT+GGG | + | chr5.3:62196087-62196106 | MS.gene009559:intron | 30.0% |
! | ATGCAAATTTCTAAGTTGAG+AGG | - | chr5.3:62198453-62198472 | None:intergenic | 30.0% |
! | ATGCATTTTTGCCATAAACA+CGG | + | chr5.3:62198114-62198133 | MS.gene009559:intron | 30.0% |
! | CAAATTCGACTTTTAACCAA+TGG | - | chr5.3:62196404-62196423 | None:intergenic | 30.0% |
! | GAAAGAAATGATTTTCGACA+TGG | + | chr5.3:62198756-62198775 | MS.gene009559:CDS | 30.0% |
! | GAATTTGAGATCAAAAGCTA+TGG | - | chr5.3:62198575-62198594 | None:intergenic | 30.0% |
! | GCATGATGATGATGAATAAA+TGG | + | chr5.3:62195887-62195906 | MS.gene009559:intron | 30.0% |
! | GCTGTTCTTACTATCTTTTA+CGG | - | chr5.3:62197126-62197145 | None:intergenic | 30.0% |
! | TTTACAACGTTTAGAGCTAA+TGG | - | chr5.3:62197920-62197939 | None:intergenic | 30.0% |
!!! | TCAAAGCAACTTTTTTTTGG+TGG | - | chr5.3:62196040-62196059 | None:intergenic | 30.0% |
AAATGTGCCAAAGTACACAT+CGG | + | chr5.3:62196902-62196921 | MS.gene009559:CDS | 35.0% | |
AAGAACCAAATGGAATCACA+AGG | - | chr5.3:62198425-62198444 | None:intergenic | 35.0% | |
ACAAAGTCACATCCTGAAAA+TGG | - | chr5.3:62198072-62198091 | None:intergenic | 35.0% | |
AGACTTCAAGGAGATAATGA+AGG | - | chr5.3:62198172-62198191 | None:intergenic | 35.0% | |
AGATCGCAATAGATTCTCAA+TGG | - | chr5.3:62196552-62196571 | None:intergenic | 35.0% | |
AGCAAAGAAAAGGATATAGG+AGG | - | chr5.3:62198498-62198517 | None:intergenic | 35.0% | |
ATCTATGTAAAGGGTCTAGA+TGG | + | chr5.3:62198685-62198704 | MS.gene009559:CDS | 35.0% | |
ATGCATTTCAGCCATAAACA+CGG | + | chr5.3:62196722-62196741 | MS.gene009559:CDS | 35.0% | |
CAAATGCATACCTGAAAAAC+GGG | - | chr5.3:62195240-62195259 | None:intergenic | 35.0% | |
CTACTTGCTTTCCTAAACTT+TGG | + | chr5.3:62196477-62196496 | MS.gene009559:intron | 35.0% | |
CTATTAGGCAAAAGATGAAG+TGG | + | chr5.3:62197064-62197083 | MS.gene009559:intron | 35.0% | |
CTGAAAAACGGGAATCATTA+AGG | - | chr5.3:62197207-62197226 | None:intergenic | 35.0% | |
GAATGCAAAATATGGTTGCA+GGG | + | chr5.3:62196589-62196608 | MS.gene009559:intron | 35.0% | |
GAGTTTCACATAGCACTTAA+GGG | - | chr5.3:62197376-62197395 | None:intergenic | 35.0% | |
GCAGATGCAAATCTATGTAA+AGG | + | chr5.3:62198675-62198694 | MS.gene009559:intron | 35.0% | |
GGGTGAAAAATATGTTCCTT+AGG | + | chr5.3:62196609-62196628 | MS.gene009559:intron | 35.0% | |
TGAAAAACGGGAATCGTTAA+GGG | - | chr5.3:62195228-62195247 | None:intergenic | 35.0% | |
TGCAGATTACAACGTCAAAA+AGG | + | chr5.3:62198846-62198865 | MS.gene009559:CDS | 35.0% | |
TGTATGAACTCTTAACGTCA+AGG | - | chr5.3:62198723-62198742 | None:intergenic | 35.0% | |
TGTGTGTGTGTGTATAAATG+AGG | - | chr5.3:62195543-62195562 | None:intergenic | 35.0% | |
TTGACGTTAAGAGTTCATAC+AGG | + | chr5.3:62198722-62198741 | MS.gene009559:CDS | 35.0% | |
TTTGACGTTGTAATCTGCAA+GGG | - | chr5.3:62198845-62198864 | None:intergenic | 35.0% | |
! | ATTTTCCTCTCGAAGAACAA+TGG | - | chr5.3:62198205-62198224 | None:intergenic | 35.0% |
! | CTGCAACCATATTTTGCATT+CGG | - | chr5.3:62196590-62196609 | None:intergenic | 35.0% |
! | CTTAAGGGAGAAGTGTATAA+TGG | - | chr5.3:62195387-62195406 | None:intergenic | 35.0% |
! | TCATGTACGTATTTTTCACC+CGG | - | chr5.3:62198002-62198021 | None:intergenic | 35.0% |
! | TGCATTTTTGCCATAAACAC+GGG | + | chr5.3:62198115-62198134 | MS.gene009559:intron | 35.0% |
! | TTTACAACGTTTAGAGCTGA+TGG | - | chr5.3:62196528-62196547 | None:intergenic | 35.0% |
! | TTTTGACGTTGTAATCTGCA+AGG | - | chr5.3:62198846-62198865 | None:intergenic | 35.0% |
!! | CTTAATGATTCCCGTTTTTC+AGG | + | chr5.3:62197205-62197224 | MS.gene009559:CDS | 35.0% |
!! | GATCGTTTTATTGGCAATTG+TGG | + | chr5.3:62198651-62198670 | MS.gene009559:intron | 35.0% |
!! | GGTTAACAAAGTCGATTTGA+TGG | + | chr5.3:62197797-62197816 | MS.gene009559:intron | 35.0% |
!!! | AAGCAACTTTTTTTTGGTGG+TGG | - | chr5.3:62196037-62196056 | None:intergenic | 35.0% |
AAAATATGGCCACATACGTC+TGG | - | chr5.3:62196825-62196844 | None:intergenic | 40.0% | |
AAATATGGCCACATACGTCT+GGG | - | chr5.3:62196824-62196843 | None:intergenic | 40.0% | |
AACAAAGTCACATCCTGGAA+AGG | - | chr5.3:62196681-62196700 | None:intergenic | 40.0% | |
AACGTCCATGAATGGACATT+TGG | + | chr5.3:62195433-62195452 | MS.gene009559:intron | 40.0% | |
AATGATCTCTTCACCGTCTT+TGG | - | chr5.3:62195118-62195137 | None:intergenic | 40.0% | |
AATGGAATCACAAGGAACTC+TGG | - | chr5.3:62198417-62198436 | None:intergenic | 40.0% | |
ACAAAGTCACATCCTGGAAA+GGG | - | chr5.3:62196680-62196699 | None:intergenic | 40.0% | |
ACAACGTCGCATAAGATGAT+GGG | - | chr5.3:62195780-62195799 | None:intergenic | 40.0% | |
ACTCAATGACTGATAGTAGC+TGG | - | chr5.3:62196267-62196286 | None:intergenic | 40.0% | |
AGAGGTTCGAAAGAACCAAA+TGG | - | chr5.3:62198435-62198454 | None:intergenic | 40.0% | |
ATCACCGTTATCAGTCACTT+AGG | - | chr5.3:62197440-62197459 | None:intergenic | 40.0% | |
ATCATCTTATGCGACGTTGT+AGG | + | chr5.3:62195780-62195799 | MS.gene009559:intron | 40.0% | |
CCATGTCCGAATGCAAAATA+TGG | + | chr5.3:62196581-62196600 | MS.gene009559:intron | 40.0% | |
CCTGAAAATGGACAGTAACA+GGG | - | chr5.3:62198060-62198079 | None:intergenic | 40.0% | |
CGAATGCAAAATATGGTTGC+AGG | + | chr5.3:62196588-62196607 | MS.gene009559:intron | 40.0% | |
CGAATGCAAAATATGGTTGC+CGG | + | chr5.3:62196588-62196607 | MS.gene009559:intron | 40.0% | |
CTGAAAAACGGGAATCGTTA+AGG | - | chr5.3:62195229-62195248 | None:intergenic | 40.0% | |
GAATGCAAAATATGGTTGCC+GGG | + | chr5.3:62197981-62198000 | MS.gene009559:intron | 40.0% | |
GAGTTCCTTGTGATTCCATT+TGG | + | chr5.3:62198417-62198436 | MS.gene009559:CDS | 40.0% | |
GAGTTTCACATCGCACTTAA+GGG | - | chr5.3:62195402-62195421 | None:intergenic | 40.0% | |
GATGTGTACTTTGGCACATT+TGG | - | chr5.3:62196903-62196922 | None:intergenic | 40.0% | |
GATTCAACAAAGTCACATCC+TGG | - | chr5.3:62196686-62196705 | None:intergenic | 40.0% | |
GCTGCAATACAGTGTGATAA+TGG | + | chr5.3:62196440-62196459 | MS.gene009559:intron | 40.0% | |
GCTTGACTTTCTCACTTTAG+AGG | + | chr5.3:62195719-62195738 | MS.gene009559:intron | 40.0% | |
GGAGTTTCACATAGCACTTA+AGG | - | chr5.3:62197377-62197396 | None:intergenic | 40.0% | |
GGGTGAAAAATACGTACATG+AGG | + | chr5.3:62198001-62198020 | MS.gene009559:intron | 40.0% | |
GGTTTCATCATCAGACTTCA+AGG | - | chr5.3:62198184-62198203 | None:intergenic | 40.0% | |
GTGACCTAAGTGACTGATAA+CGG | + | chr5.3:62197433-62197452 | MS.gene009559:intron | 40.0% | |
GTTGGAAATCACAAGAGGAA+CGG | - | chr5.3:62197150-62197169 | None:intergenic | 40.0% | |
TACAACGTCGCATAAGATGA+TGG | - | chr5.3:62195781-62195800 | None:intergenic | 40.0% | |
TCATGGACGTTACAAGACAA+CGG | - | chr5.3:62195424-62195443 | None:intergenic | 40.0% | |
TCCACGAATAGACATTTGGA+GGG | + | chr5.3:62197411-62197430 | MS.gene009559:intron | 40.0% | |
TCCATGAATGGACATTTGGA+GGG | + | chr5.3:62195437-62195456 | MS.gene009559:intron | 40.0% | |
TCCTGAAAATGGACAGTAAC+AGG | - | chr5.3:62198061-62198080 | None:intergenic | 40.0% | |
TGAAACCATTGTTCTTCGAG+AGG | + | chr5.3:62198197-62198216 | MS.gene009559:CDS | 40.0% | |
TGACACTCGTTCCAAAGTTT+AGG | - | chr5.3:62197883-62197902 | None:intergenic | 40.0% | |
TGACACTTGCTCCAAAGTTT+AGG | - | chr5.3:62196491-62196510 | None:intergenic | 40.0% | |
TGCAGCACTCAAGCAAATTA+GGG | - | chr5.3:62197172-62197191 | None:intergenic | 40.0% | |
TGCAGCACTCAAGCAATTTA+GGG | - | chr5.3:62195194-62195213 | None:intergenic | 40.0% | |
TGCATTTCAGCCATAAACAC+GGG | + | chr5.3:62196723-62196742 | MS.gene009559:CDS | 40.0% | |
TGTCTTGTAACGTCCATGAA+TGG | + | chr5.3:62195425-62195444 | MS.gene009559:intron | 40.0% | |
TTAGGGTTGGAAATCACAAG+AGG | - | chr5.3:62197155-62197174 | None:intergenic | 40.0% | |
TTCACTTACGCTAGCTGAAA+AGG | + | chr5.3:62195821-62195840 | MS.gene009559:intron | 40.0% | |
TTGCAGCACTCAAGCAAATT+AGG | - | chr5.3:62197173-62197192 | None:intergenic | 40.0% | |
TTGCAGCACTCAAGCAATTT+AGG | - | chr5.3:62195195-62195214 | None:intergenic | 40.0% | |
TTTCACATAGCACTTAAGGG+AGG | - | chr5.3:62197373-62197392 | None:intergenic | 40.0% | |
TTTGAGAATCCCCGTGTTTA+TGG | - | chr5.3:62196736-62196755 | None:intergenic | 40.0% | |
! | CCATATTTTGCATTCGGACA+TGG | - | chr5.3:62196584-62196603 | None:intergenic | 40.0% |
! | CGGCAACCATATTTTGCATT+CGG | - | chr5.3:62197982-62198001 | None:intergenic | 40.0% |
! | CTTCATGATTTGTCTGCCTA+AGG | - | chr5.3:62196628-62196647 | None:intergenic | 40.0% |
! | CTTTTGCCAAGAATGTCCAA+CGG | + | chr5.3:62198370-62198389 | MS.gene009559:CDS | 40.0% |
! | GATAACGGTGATCTGGTAAT+AGG | + | chr5.3:62195474-62195493 | MS.gene009559:intron | 40.0% |
! | GCATTTTTGCCATAAACACG+GGG | + | chr5.3:62198116-62198135 | MS.gene009559:intron | 40.0% |
! | GCTGTCAATATTTGCTGCTT+TGG | + | chr5.3:62198273-62198292 | MS.gene009559:CDS | 40.0% |
! | TTTTGCCAAGAATGTCCAAC+GGG | + | chr5.3:62198371-62198390 | MS.gene009559:CDS | 40.0% |
!! | CTACTTGCTGTCCTAAACTT+TGG | + | chr5.3:62197869-62197888 | MS.gene009559:intron | 40.0% |
!! | CTTAACGATTCCCGTTTTTC+AGG | + | chr5.3:62195227-62195246 | MS.gene009559:intron | 40.0% |
!! | GATTTGCTAAAGTAACCCGT+TGG | - | chr5.3:62198389-62198408 | None:intergenic | 40.0% |
!!! | AACTTTTTTTTGGTGGTGGC+CGG | - | chr5.3:62196033-62196052 | None:intergenic | 40.0% |
ACCAGCAAAGATCAGACGTT+GGG | - | chr5.3:62198800-62198819 | None:intergenic | 45.0% | |
ACCCTCCAAATGTCCATTCA+TGG | - | chr5.3:62195441-62195460 | None:intergenic | 45.0% | |
ACCCTCCAAATGTCTATTCG+TGG | - | chr5.3:62197415-62197434 | None:intergenic | 45.0% | |
ACTCAATGACTGACAGTAGC+TGG | - | chr5.3:62197707-62197726 | None:intergenic | 45.0% | |
AGTAACCCGTTGGACATTCT+TGG | - | chr5.3:62198379-62198398 | None:intergenic | 45.0% | |
ATCACCGTTATCAGCCACTT+GGG | - | chr5.3:62195466-62195485 | None:intergenic | 45.0% | |
ATGGACAGTAACAGGGCTTA+TGG | - | chr5.3:62198053-62198072 | None:intergenic | 45.0% | |
CAACGTCGCATAAGATGATG+GGG | - | chr5.3:62195779-62195798 | None:intergenic | 45.0% | |
CACGTCCACGAATAGACATT+TGG | + | chr5.3:62197407-62197426 | MS.gene009559:intron | 45.0% | |
GCACTCAAGCAAATTAGGGT+TGG | - | chr5.3:62197168-62197187 | None:intergenic | 45.0% | |
GCATTTCAGCCATAAACACG+GGG | + | chr5.3:62196724-62196743 | MS.gene009559:CDS | 45.0% | |
GGAGTTTCACATCGCACTTA+AGG | - | chr5.3:62195403-62195422 | None:intergenic | 45.0% | |
GGGTCTAGATGGAAAGACAA+TGG | + | chr5.3:62198696-62198715 | MS.gene009559:CDS | 45.0% | |
GTCCACGAATAGACATTTGG+AGG | + | chr5.3:62197410-62197429 | MS.gene009559:intron | 45.0% | |
GTCCATGAATGGACATTTGG+AGG | + | chr5.3:62195436-62195455 | MS.gene009559:intron | 45.0% | |
GTTGCTACCGATGTGTACTT+TGG | - | chr5.3:62196912-62196931 | None:intergenic | 45.0% | |
TACCAGCAAAGATCAGACGT+TGG | - | chr5.3:62198801-62198820 | None:intergenic | 45.0% | |
TTTGCTGGTATGCAACTCGA+TGG | + | chr5.3:62198811-62198830 | MS.gene009559:CDS | 45.0% | |
! | CCCTGTTACTGTCCATTTTC+AGG | + | chr5.3:62198057-62198076 | MS.gene009559:intron | 45.0% |
! | GCACTCAAGCAATTTAGGGT+CGG | - | chr5.3:62195190-62195209 | None:intergenic | 45.0% |
! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr5.3:62195969-62195988 | MS.gene009559:intron | 45.0% |
!! | AAAGGATATAGGAGGTACCC+TGG | - | chr5.3:62198490-62198509 | None:intergenic | 45.0% |
!! | AAGGATATAGGAGGTACCCT+GGG | - | chr5.3:62198489-62198508 | None:intergenic | 45.0% |
!! | AGTGACTGATAACGGTGATC+TGG | + | chr5.3:62197441-62197460 | MS.gene009559:intron | 45.0% |
!!! | ACTTTTTTTTGGTGGTGGCC+GGG | - | chr5.3:62196032-62196051 | None:intergenic | 45.0% |
AGGGACAGTAACAGGGCTTA+TGG | - | chr5.3:62196661-62196680 | None:intergenic | 50.0% | |
AGGGAGACATGCACCAAAGA+CGG | + | chr5.3:62195102-62195121 | MS.gene009559:CDS | 50.0% | |
CCTGGAAAGGGACAGTAACA+GGG | - | chr5.3:62196668-62196687 | None:intergenic | 50.0% | |
CGTTGTAATCTGCAAGGGTC+CGG | - | chr5.3:62198840-62198859 | None:intergenic | 50.0% | |
GATCACCGTTATCAGCCACT+TGG | - | chr5.3:62195467-62195486 | None:intergenic | 50.0% | |
GGGACAGTAACAGGGCTTAT+GGG | - | chr5.3:62196660-62196679 | None:intergenic | 50.0% | |
GTATGCAACTCGATGGCAAC+CGG | + | chr5.3:62198818-62198837 | MS.gene009559:CDS | 50.0% | |
GTGACCCAAGTGGCTGATAA+CGG | + | chr5.3:62195459-62195478 | MS.gene009559:intron | 50.0% | |
TCCTGGAAAGGGACAGTAAC+AGG | - | chr5.3:62196669-62196688 | None:intergenic | 50.0% | |
TCGTGGACGTGACAACACAA+AGG | - | chr5.3:62197398-62197417 | None:intergenic | 50.0% | |
! | AAGGTTTGGGGTTCAAACCC+CGG | + | chr5.3:62196011-62196030 | MS.gene009559:intron | 50.0% |
!! | AGGATATAGGAGGTACCCTG+GGG | - | chr5.3:62198488-62198507 | None:intergenic | 50.0% |
!! | AGTGGCTGATAACGGTGATC+TGG | + | chr5.3:62195467-62195486 | MS.gene009559:intron | 50.0% |
!! | TACTCAGACTCAGAAGCGTC+TGG | - | chr5.3:62198300-62198319 | None:intergenic | 50.0% |
!!! | CTTTTTTTTGGTGGTGGCCG+GGG | - | chr5.3:62196031-62196050 | None:intergenic | 50.0% |
CATTTGGAGGGTGACCCAAG+TGG | + | chr5.3:62195449-62195468 | MS.gene009559:intron | 55.0% | |
CCAACTGAGCTAAGCTCACG+AGG | - | chr5.3:62195967-62195986 | None:intergenic | 55.0% | |
CCCTGTTACTGTCCCTTTCC+AGG | + | chr5.3:62196665-62196684 | MS.gene009559:intron | 55.0% | |
CCTCGTGAGCTTAGCTCAGT+TGG | + | chr5.3:62195964-62195983 | MS.gene009559:intron | 55.0% | |
CTGCAAAGCCCAGACGTATG+TGG | + | chr5.3:62196813-62196832 | MS.gene009559:CDS | 55.0% | |
GCCCAACGTCTGATCTTTGC+TGG | + | chr5.3:62198796-62198815 | MS.gene009559:CDS | 55.0% | |
! | CATAACTTGCGCAACCCCCA+GGG | + | chr5.3:62198470-62198489 | MS.gene009559:CDS | 55.0% |
!! | GGATATAGGAGGTACCCTGG+GGG | - | chr5.3:62198487-62198506 | None:intergenic | 55.0% |
ACCTTGTCCTCCGCCTCCTT+GGG | + | chr5.3:62198881-62198900 | MS.gene009559:CDS | 60.0% | |
ATCAGACGTTGGGCGTGCAC+TGG | - | chr5.3:62198790-62198809 | None:intergenic | 60.0% | |
TCAGACGTTGGGCGTGCACT+GGG | - | chr5.3:62198789-62198808 | None:intergenic | 60.0% | |
! | GCATAACTTGCGCAACCCCC+AGG | + | chr5.3:62198469-62198488 | MS.gene009559:CDS | 60.0% |
CAAGGAGGCGGAGGACAAGG+TGG | - | chr5.3:62198882-62198901 | None:intergenic | 65.0% | |
CACCTTGTCCTCCGCCTCCT+TGG | + | chr5.3:62198880-62198899 | MS.gene009559:CDS | 65.0% | |
CCTTGTCCTCCGCCTCCTTG+GGG | + | chr5.3:62198882-62198901 | MS.gene009559:CDS | 65.0% | |
GAGGCGGAGGACAAGGTGGA+GGG | - | chr5.3:62198878-62198897 | None:intergenic | 65.0% | |
CCCCAAGGAGGCGGAGGACA+AGG | - | chr5.3:62198885-62198904 | None:intergenic | 70.0% | |
GGAGGCGGAGGACAAGGTGG+AGG | - | chr5.3:62198879-62198898 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 62194958 | 62198909 | 62194958 | ID=MS.gene009559 |
chr5.3 | mRNA | 62194958 | 62198909 | 62194958 | ID=MS.gene009559.t1;Parent=MS.gene009559 |
chr5.3 | exon | 62194958 | 62194981 | 62194958 | ID=MS.gene009559.t1.exon1;Parent=MS.gene009559.t1 |
chr5.3 | CDS | 62194958 | 62194981 | 62194958 | ID=cds.MS.gene009559.t1;Parent=MS.gene009559.t1 |
chr5.3 | exon | 62195090 | 62195156 | 62195090 | ID=MS.gene009559.t1.exon2;Parent=MS.gene009559.t1 |
chr5.3 | CDS | 62195090 | 62195156 | 62195090 | ID=cds.MS.gene009559.t1;Parent=MS.gene009559.t1 |
chr5.3 | exon | 62196687 | 62196961 | 62196687 | ID=MS.gene009559.t1.exon3;Parent=MS.gene009559.t1 |
chr5.3 | CDS | 62196687 | 62196961 | 62196687 | ID=cds.MS.gene009559.t1;Parent=MS.gene009559.t1 |
chr5.3 | exon | 62197071 | 62197226 | 62197071 | ID=MS.gene009559.t1.exon4;Parent=MS.gene009559.t1 |
chr5.3 | CDS | 62197071 | 62197226 | 62197071 | ID=cds.MS.gene009559.t1;Parent=MS.gene009559.t1 |
chr5.3 | exon | 62198189 | 62198491 | 62198189 | ID=MS.gene009559.t1.exon5;Parent=MS.gene009559.t1 |
chr5.3 | CDS | 62198189 | 62198491 | 62198189 | ID=cds.MS.gene009559.t1;Parent=MS.gene009559.t1 |
chr5.3 | exon | 62198679 | 62198909 | 62198679 | ID=MS.gene009559.t1.exon6;Parent=MS.gene009559.t1 |
chr5.3 | CDS | 62198679 | 62198909 | 62198679 | ID=cds.MS.gene009559.t1;Parent=MS.gene009559.t1 |
Gene Sequence |
Protein sequence |