Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81807.t1 | XP_003616125.1 | 93.8 | 275 | 17 | 0 | 1 | 275 | 66 | 340 | 2.70E-145 | 524.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81807.t1 | Q84K34 | 32.3 | 198 | 133 | 1 | 2 | 198 | 143 | 340 | 1.3e-26 | 121.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81807.t1 | G7KFP6 | 93.8 | 275 | 17 | 0 | 1 | 275 | 66 | 340 | 2.0e-145 | 524.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81807.t1 | MTR_5g076370 | 93.818 | 275 | 17 | 0 | 1 | 275 | 66 | 340 | 0.0 | 532 |
MS.gene81807.t1 | MTR_1g046640 | 67.399 | 273 | 85 | 2 | 2 | 274 | 44 | 312 | 7.07e-126 | 361 |
MS.gene81807.t1 | MTR_5g067400 | 66.300 | 273 | 89 | 1 | 2 | 274 | 44 | 313 | 2.49e-125 | 359 |
MS.gene81807.t1 | MTR_5g076660 | 67.766 | 273 | 88 | 0 | 2 | 274 | 66 | 338 | 7.44e-125 | 359 |
MS.gene81807.t1 | MTR_7g024290 | 67.153 | 274 | 86 | 2 | 2 | 274 | 44 | 314 | 2.95e-124 | 357 |
MS.gene81807.t1 | MTR_5g076810 | 67.658 | 269 | 83 | 2 | 7 | 274 | 2 | 267 | 8.97e-124 | 353 |
MS.gene81807.t1 | MTR_1g046650 | 65.201 | 273 | 91 | 2 | 2 | 274 | 44 | 312 | 3.12e-123 | 354 |
MS.gene81807.t1 | MTR_1g046650 | 65.201 | 273 | 91 | 2 | 2 | 274 | 44 | 312 | 9.00e-123 | 353 |
MS.gene81807.t1 | MTR_1g046650 | 65.201 | 273 | 91 | 2 | 2 | 274 | 75 | 343 | 2.63e-122 | 353 |
MS.gene81807.t1 | MTR_7g094390 | 63.370 | 273 | 97 | 1 | 2 | 274 | 205 | 474 | 1.15e-112 | 333 |
MS.gene81807.t1 | MTR_1g046650 | 65.182 | 247 | 82 | 2 | 28 | 274 | 1 | 243 | 7.99e-111 | 320 |
MS.gene81807.t1 | MTR_5g061290 | 61.011 | 277 | 97 | 4 | 4 | 274 | 53 | 324 | 2.44e-109 | 319 |
MS.gene81807.t1 | MTR_5g076720 | 60.507 | 276 | 103 | 2 | 2 | 274 | 115 | 387 | 4.29e-109 | 321 |
MS.gene81807.t1 | MTR_2g038420 | 61.871 | 278 | 98 | 3 | 2 | 274 | 58 | 332 | 1.04e-108 | 318 |
MS.gene81807.t1 | MTR_5g076505 | 58.333 | 276 | 109 | 2 | 2 | 274 | 40 | 312 | 5.10e-105 | 308 |
MS.gene81807.t1 | MTR_5g076520 | 60.727 | 275 | 101 | 3 | 2 | 272 | 44 | 315 | 1.38e-104 | 307 |
MS.gene81807.t1 | MTR_2g038430 | 56.993 | 286 | 107 | 3 | 2 | 274 | 58 | 340 | 5.44e-104 | 306 |
MS.gene81807.t1 | MTR_5g076820 | 62.185 | 238 | 82 | 4 | 2 | 235 | 52 | 285 | 4.42e-92 | 274 |
MS.gene81807.t1 | MTR_5g076540 | 66.111 | 180 | 61 | 0 | 5 | 184 | 47 | 226 | 1.68e-76 | 233 |
MS.gene81807.t1 | MTR_5g077020 | 58.586 | 198 | 68 | 4 | 11 | 200 | 17 | 208 | 1.14e-66 | 207 |
MS.gene81807.t1 | MTR_4g058025 | 76.106 | 113 | 26 | 1 | 39 | 150 | 14 | 126 | 8.99e-52 | 167 |
MS.gene81807.t1 | MTR_4g094468 | 41.624 | 197 | 113 | 2 | 2 | 198 | 130 | 324 | 5.76e-48 | 162 |
MS.gene81807.t1 | MTR_5g092700 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 3.40e-23 | 92.8 |
MS.gene81807.t1 | MTR_4g073580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 3.40e-23 | 92.8 |
MS.gene81807.t1 | MTR_7g105080 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 5.82e-23 | 91.7 |
MS.gene81807.t1 | MTR_3g092130 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 5.82e-23 | 91.7 |
MS.gene81807.t1 | MTR_1g059690 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 5.82e-23 | 91.7 |
MS.gene81807.t1 | MTR_4g073580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 9.25e-23 | 92.8 |
MS.gene81807.t1 | MTR_8g088060 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 1.01e-22 | 91.7 |
MS.gene81807.t1 | MTR_5g033960 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 1.06e-22 | 91.7 |
MS.gene81807.t1 | MTR_3g092130 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 1.26e-22 | 91.3 |
MS.gene81807.t1 | MTR_7g116360 | 63.514 | 74 | 27 | 0 | 201 | 274 | 48 | 121 | 1.71e-22 | 94.4 |
MS.gene81807.t1 | MTR_7g116360 | 56.627 | 83 | 36 | 0 | 192 | 274 | 115 | 197 | 7.15e-22 | 92.4 |
MS.gene81807.t1 | MTR_7g116360 | 56.627 | 83 | 36 | 0 | 192 | 274 | 191 | 273 | 7.15e-22 | 92.4 |
MS.gene81807.t1 | MTR_4g088485 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 1.84e-22 | 92.8 |
MS.gene81807.t1 | MTR_4g088485 | 63.014 | 73 | 27 | 0 | 202 | 274 | 138 | 210 | 1.84e-22 | 92.8 |
MS.gene81807.t1 | MTR_4g088485 | 46.575 | 73 | 24 | 1 | 202 | 274 | 77 | 134 | 9.04e-12 | 63.5 |
MS.gene81807.t1 | MTR_1g066390 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.17e-22 | 92.8 |
MS.gene81807.t1 | MTR_1g066390 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.17e-22 | 92.8 |
MS.gene81807.t1 | MTR_1g066390 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.17e-22 | 92.8 |
MS.gene81807.t1 | MTR_7g116360 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.34e-22 | 92.8 |
MS.gene81807.t1 | MTR_7g116360 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.34e-22 | 92.8 |
MS.gene81807.t1 | MTR_7g116360 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.34e-22 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 5.28e-22 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 5.28e-22 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 5.28e-22 | 92.8 |
MS.gene81807.t1 | MTR_6g061930 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 7.88e-22 | 92.8 |
MS.gene81807.t1 | MTR_6g061930 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 7.88e-22 | 92.8 |
MS.gene81807.t1 | MTR_6g061930 | 63.014 | 73 | 27 | 0 | 202 | 274 | 214 | 286 | 7.88e-22 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.57e-22 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 8.57e-22 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 8.57e-22 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 8.57e-22 | 92.8 |
MS.gene81807.t1 | MTR_4g080920 | 61.644 | 73 | 28 | 0 | 202 | 274 | 77 | 149 | 8.95e-22 | 91.3 |
MS.gene81807.t1 | MTR_4g080920 | 61.644 | 73 | 28 | 0 | 202 | 274 | 1 | 73 | 1.82e-21 | 90.5 |
MS.gene81807.t1 | MTR_4g080920 | 50.685 | 73 | 36 | 0 | 202 | 274 | 153 | 225 | 1.76e-14 | 71.2 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 9.97e-22 | 92.0 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 9.97e-22 | 92.0 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 9.97e-22 | 92.0 |
MS.gene81807.t1 | MTR_5g061310 | 59.722 | 72 | 29 | 0 | 202 | 273 | 2 | 73 | 1.22e-21 | 86.7 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 1.61e-21 | 94.0 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 3.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 3.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 3.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 3.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 381 | 453 | 3.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 457 | 529 | 3.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g081020 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 1.87e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g081020 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 1.87e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g081020 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 1.87e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g081020 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 1.87e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g081020 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 1.87e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 1.96e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 1.96e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 1.96e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g091580 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 1.96e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g091580 | 61.644 | 73 | 28 | 0 | 202 | 274 | 229 | 301 | 6.95e-21 | 91.3 |
MS.gene81807.t1 | MTR_4g080797 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g080797 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g080797 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g080797 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g080797 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 1.98e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 381 | 453 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 381 | 453 | 3.32e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 4.18e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 4.18e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 4.18e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 4.18e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 4.18e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 381 | 453 | 4.18e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g081010 | 63.014 | 73 | 27 | 0 | 202 | 274 | 457 | 529 | 4.18e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 4.22e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 4.22e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 4.22e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 4.22e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 4.22e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 381 | 453 | 4.22e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g018230 | 63.014 | 73 | 27 | 0 | 202 | 274 | 457 | 529 | 4.22e-21 | 92.8 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 4.92e-21 | 93.2 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 4.92e-21 | 93.2 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 4.92e-21 | 93.2 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 4.92e-21 | 93.2 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 381 | 453 | 4.92e-21 | 93.2 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 457 | 529 | 4.92e-21 | 93.2 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 533 | 605 | 4.92e-21 | 93.2 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 609 | 681 | 4.92e-21 | 93.2 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 685 | 757 | 4.92e-21 | 93.2 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 761 | 833 | 4.92e-21 | 93.2 |
MS.gene81807.t1 | MTR_4g088495 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 5.78e-21 | 92.8 |
MS.gene81807.t1 | MTR_8g479250 | 64.384 | 73 | 26 | 0 | 202 | 274 | 141 | 213 | 1.79e-19 | 86.3 |
MS.gene81807.t1 | MTR_8g479250 | 44.048 | 84 | 36 | 1 | 192 | 275 | 207 | 279 | 1.23e-12 | 67.0 |
MS.gene81807.t1 | MTR_5g076740 | 60.526 | 76 | 27 | 2 | 201 | 273 | 85 | 160 | 9.99e-19 | 81.3 |
MS.gene81807.t1 | MTR_5g076350 | 56.757 | 74 | 31 | 1 | 202 | 274 | 8 | 81 | 3.10e-18 | 77.8 |
MS.gene81807.t1 | MTR_5g076760 | 63.158 | 57 | 21 | 0 | 212 | 268 | 5 | 61 | 2.43e-16 | 72.8 |
MS.gene81807.t1 | MTR_4g009980 | 51.562 | 64 | 31 | 0 | 211 | 274 | 5 | 68 | 1.02e-14 | 67.8 |
MS.gene81807.t1 | MTR_5g076340 | 53.333 | 75 | 33 | 2 | 202 | 274 | 9 | 83 | 1.55e-14 | 67.8 |
MS.gene81807.t1 | MTR_5g076780 | 56.452 | 62 | 27 | 0 | 213 | 274 | 1 | 62 | 2.69e-14 | 66.6 |
MS.gene81807.t1 | MTR_7g085590 | 24.540 | 163 | 121 | 1 | 26 | 186 | 109 | 271 | 5.42e-12 | 65.1 |
MS.gene81807.t1 | MTR_1g054335 | 25.346 | 217 | 144 | 8 | 2 | 202 | 91 | 305 | 2.46e-11 | 63.2 |
MS.gene81807.t1 | MTR_5g076750 | 52.941 | 51 | 24 | 0 | 225 | 275 | 16 | 66 | 9.81e-11 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81807.t1 | AT5G37930 | 32.323 | 198 | 133 | 1 | 2 | 198 | 143 | 340 | 4.63e-32 | 121 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 4.09e-23 | 92.8 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 4.09e-23 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 4.09e-23 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 4.09e-23 | 92.8 |
MS.gene81807.t1 | AT1G31340 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 4.10e-23 | 92.8 |
MS.gene81807.t1 | AT2G35635 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 4.15e-23 | 92.8 |
MS.gene81807.t1 | AT2G47110 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 6.89e-23 | 92.4 |
MS.gene81807.t1 | AT2G47110 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 6.89e-23 | 92.4 |
MS.gene81807.t1 | AT3G52590 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 7.92e-23 | 91.3 |
MS.gene81807.t1 | AT2G36170 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 7.92e-23 | 91.3 |
MS.gene81807.t1 | AT3G62250 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.15e-23 | 92.0 |
MS.gene81807.t1 | AT1G23410 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.20e-23 | 92.0 |
MS.gene81807.t1 | AT5G37870 | 30.108 | 186 | 125 | 4 | 2 | 182 | 75 | 260 | 1.61e-22 | 94.4 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G05050 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.45e-22 | 92.8 |
MS.gene81807.t1 | AT5G37640 | 56.627 | 83 | 36 | 0 | 192 | 274 | 69 | 151 | 3.32e-22 | 94.4 |
MS.gene81807.t1 | AT5G37640 | 54.217 | 83 | 38 | 0 | 192 | 274 | 145 | 227 | 1.81e-19 | 86.7 |
MS.gene81807.t1 | AT5G37640 | 62.162 | 74 | 27 | 1 | 202 | 274 | 231 | 304 | 1.62e-18 | 84.0 |
MS.gene81807.t1 | AT5G37640 | 54.795 | 73 | 33 | 0 | 202 | 274 | 3 | 75 | 7.76e-15 | 73.6 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT4G02890 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 8.62e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G03240 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G20620 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G20620 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G20620 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT5G20620 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 8.66e-22 | 92.8 |
MS.gene81807.t1 | AT1G55060 | 61.644 | 73 | 28 | 0 | 202 | 274 | 77 | 149 | 8.91e-22 | 91.3 |
MS.gene81807.t1 | AT1G55060 | 54.217 | 83 | 38 | 0 | 192 | 274 | 143 | 225 | 8.90e-20 | 85.9 |
MS.gene81807.t1 | AT1G55060 | 58.904 | 73 | 30 | 0 | 202 | 274 | 1 | 73 | 2.58e-19 | 84.7 |
MS.gene81807.t1 | AT1G65350 | 63.014 | 73 | 27 | 0 | 202 | 274 | 152 | 224 | 1.15e-21 | 92.8 |
MS.gene81807.t1 | AT1G65350 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 1.20e-21 | 92.8 |
MS.gene81807.t1 | AT1G65350 | 61.644 | 73 | 27 | 1 | 202 | 274 | 77 | 148 | 7.30e-19 | 85.1 |
MS.gene81807.t1 | AT1G65350 | 49.425 | 87 | 30 | 1 | 202 | 274 | 228 | 314 | 6.68e-15 | 73.9 |
MS.gene81807.t1 | AT5G20620 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.02e-21 | 92.8 |
MS.gene81807.t1 | AT5G20620 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.02e-21 | 92.8 |
MS.gene81807.t1 | AT5G20620 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.02e-21 | 92.8 |
MS.gene81807.t1 | AT5G20620 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 2.02e-21 | 92.8 |
MS.gene81807.t1 | AT5G20620 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 2.02e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 2.08e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 381 | 453 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 1 | 73 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 77 | 149 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 153 | 225 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 229 | 301 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 305 | 377 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT4G05320 | 63.014 | 73 | 27 | 0 | 202 | 274 | 381 | 453 | 3.48e-21 | 92.8 |
MS.gene81807.t1 | AT5G37890 | 30.526 | 190 | 118 | 5 | 2 | 182 | 81 | 265 | 6.68e-21 | 90.1 |
MS.gene81807.t1 | AT1G66620 | 26.238 | 202 | 143 | 4 | 2 | 198 | 74 | 274 | 1.33e-20 | 89.7 |
MS.gene81807.t1 | AT1G66650 | 29.469 | 207 | 136 | 6 | 4 | 201 | 118 | 323 | 1.77e-19 | 87.0 |
MS.gene81807.t1 | AT3G09790 | 54.217 | 83 | 38 | 0 | 192 | 274 | 69 | 151 | 4.93e-19 | 87.0 |
MS.gene81807.t1 | AT3G09790 | 54.795 | 73 | 33 | 0 | 202 | 274 | 3 | 75 | 4.39e-16 | 78.2 |
MS.gene81807.t1 | AT3G09790 | 56.164 | 73 | 32 | 0 | 202 | 274 | 552 | 624 | 3.04e-15 | 75.9 |
MS.gene81807.t1 | AT3G09790 | 55.932 | 59 | 26 | 0 | 216 | 274 | 257 | 315 | 7.75e-12 | 65.9 |
MS.gene81807.t1 | AT3G09790 | 46.154 | 78 | 42 | 0 | 193 | 270 | 384 | 461 | 2.59e-11 | 63.9 |
MS.gene81807.t1 | AT3G09790 | 50.000 | 80 | 33 | 2 | 202 | 274 | 155 | 234 | 3.61e-11 | 63.5 |
MS.gene81807.t1 | AT3G09790 | 54.217 | 83 | 38 | 0 | 192 | 274 | 69 | 151 | 4.93e-19 | 87.0 |
MS.gene81807.t1 | AT3G09790 | 54.795 | 73 | 33 | 0 | 202 | 274 | 3 | 75 | 4.39e-16 | 78.2 |
MS.gene81807.t1 | AT3G09790 | 56.164 | 73 | 32 | 0 | 202 | 274 | 552 | 624 | 3.04e-15 | 75.9 |
MS.gene81807.t1 | AT3G09790 | 55.932 | 59 | 26 | 0 | 216 | 274 | 257 | 315 | 7.75e-12 | 65.9 |
MS.gene81807.t1 | AT3G09790 | 46.154 | 78 | 42 | 0 | 193 | 270 | 384 | 461 | 2.59e-11 | 63.9 |
MS.gene81807.t1 | AT3G09790 | 50.000 | 80 | 33 | 2 | 202 | 274 | 155 | 234 | 3.61e-11 | 63.5 |
MS.gene81807.t1 | AT5G37910 | 26.961 | 204 | 140 | 5 | 2 | 198 | 68 | 269 | 1.41e-18 | 83.6 |
MS.gene81807.t1 | AT1G53930 | 47.475 | 99 | 40 | 1 | 188 | 274 | 60 | 158 | 5.28e-17 | 76.6 |
MS.gene81807.t1 | AT5G62800 | 28.571 | 182 | 123 | 5 | 7 | 182 | 80 | 260 | 2.54e-15 | 75.5 |
MS.gene81807.t1 | AT5G62800 | 28.571 | 182 | 123 | 5 | 7 | 182 | 80 | 260 | 2.98e-15 | 74.7 |
MS.gene81807.t1 | AT1G66630 | 27.461 | 193 | 133 | 4 | 4 | 189 | 81 | 273 | 4.74e-15 | 73.9 |
MS.gene81807.t1 | AT1G66660 | 27.586 | 203 | 130 | 6 | 15 | 209 | 25 | 218 | 1.49e-14 | 71.6 |
MS.gene81807.t1 | AT1G66660 | 27.103 | 214 | 139 | 6 | 4 | 209 | 138 | 342 | 1.83e-14 | 72.8 |
MS.gene81807.t1 | AT1G66610 | 29.545 | 176 | 118 | 5 | 10 | 182 | 162 | 334 | 2.49e-14 | 72.4 |
MS.gene81807.t1 | AT5G37900 | 29.143 | 175 | 108 | 5 | 19 | 182 | 50 | 219 | 1.69e-13 | 68.9 |
MS.gene81807.t1 | AT1G53950 | 45.070 | 71 | 39 | 0 | 202 | 272 | 69 | 139 | 2.58e-13 | 66.2 |
Find 61 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGATTCCATTTGGTTATTT+TGG | 0.086917 | 5.2:-64960404 | MS.gene81807:CDS |
CAATAATAGTACTATGCTTT+TGG | 0.209912 | 5.2:-64960585 | MS.gene81807:CDS |
CTTCTCTTGGATGTTGTAAC+TGG | 0.309075 | 5.2:+64959853 | None:intergenic |
CCATGTTACTGTCCCGTTAA+AGG | 0.322107 | 5.2:-64960773 | MS.gene81807:CDS |
TTTCATTTGGGCATGGCATT+TGG | 0.336178 | 5.2:+64960864 | None:intergenic |
TTAGAGAGTCCCCGTGCTTA+TGG | 0.337619 | 5.2:+64960705 | None:intergenic |
TCTAAGGGAGGCGGAGGATT+AGG | 0.340891 | 5.2:+64959819 | None:intergenic |
AACAAAATCACAACCTTTAA+CGG | 0.356146 | 5.2:+64960760 | None:intergenic |
CGGTTATAGTTATGATATAT+TGG | 0.367859 | 5.2:-64960516 | MS.gene81807:CDS |
GGTGGAGGGTTGCCTTCTCT+TGG | 0.368845 | 5.2:+64959840 | None:intergenic |
CAATATATCATAACTATAAC+CGG | 0.417047 | 5.2:+64960517 | None:intergenic |
GTCAGAACTCTCCACCTTCA+AGG | 0.425481 | 5.2:+64959982 | None:intergenic |
TGTTGTAACTGGCGAGGGTT+TGG | 0.445148 | 5.2:+64959864 | None:intergenic |
GTTCTTCAAGAGGAAAATGA+TGG | 0.445710 | 5.2:-64960623 | MS.gene81807:CDS |
CCCCGTGCTTATGGTTGAAA+TGG | 0.453443 | 5.2:+64960714 | None:intergenic |
GGAGGCGGAGGATTAGGTGG+AGG | 0.454722 | 5.2:+64959825 | None:intergenic |
GAGTTTCTCATGATTCCATT+TGG | 0.455953 | 5.2:-64960413 | MS.gene81807:CDS |
ATCAGACGTTGTTGGTGCAC+TGG | 0.461760 | 5.2:+64959914 | None:intergenic |
ACAAAATCACAACCTTTAAC+GGG | 0.462017 | 5.2:+64960761 | None:intergenic |
GCTGTCATCTAGTAGCTCAT+TGG | 0.465343 | 5.2:+64959886 | None:intergenic |
GGACATTCTTCGGAGAAGAA+TGG | 0.465579 | 5.2:+64960465 | None:intergenic |
GTAGACCGTTGGACATTCTT+CGG | 0.472280 | 5.2:+64960455 | None:intergenic |
ATGTAAATTTCTAGCTCGAT+TGG | 0.482013 | 5.2:+64960371 | None:intergenic |
GAGAAGAATGGAACTTCAGA+TGG | 0.491114 | 5.2:+64960477 | None:intergenic |
TCAGAACTCTCCACCTTCAA+GGG | 0.491345 | 5.2:+64959983 | None:intergenic |
GAAGAACCAAAATAACCAAA+TGG | 0.502893 | 5.2:+64960398 | None:intergenic |
ATATTCATAGCACATGGTTG+TGG | 0.520000 | 5.2:-64960016 | MS.gene81807:CDS |
GATGTCAACTCTTCTGAGGC+CGG | 0.523835 | 5.2:-64960536 | MS.gene81807:CDS |
ACCATTTCAACCATAAGCAC+GGG | 0.528271 | 5.2:-64960715 | MS.gene81807:CDS |
TCAGACGTTGTTGGTGCACT+GGG | 0.533496 | 5.2:+64959915 | None:intergenic |
CAGAACTCTCCACCTTCAAG+GGG | 0.536195 | 5.2:+64959984 | None:intergenic |
GTGCTTATGGTTGAAATGGT+TGG | 0.537800 | 5.2:+64960718 | None:intergenic |
TTGGATGTTGTAACTGGCGA+GGG | 0.540433 | 5.2:+64959859 | None:intergenic |
TGAAGACATTGTTCTTCAAG+AGG | 0.545725 | 5.2:-64960633 | MS.gene81807:CDS |
CTTGGATGTTGTAACTGGCG+AGG | 0.550730 | 5.2:+64959858 | None:intergenic |
TGGCAAACATCAGACGTTGT+TGG | 0.553355 | 5.2:+64959906 | None:intergenic |
CAATAAGTCAAAGTGGAAAG+AGG | 0.567412 | 5.2:-64960823 | MS.gene81807:CDS |
CATTGATGTCAACTCTTCTG+AGG | 0.567678 | 5.2:-64960540 | MS.gene81807:CDS |
AGAATTCAACGAGACAATGA+AGG | 0.570430 | 5.2:+64960661 | None:intergenic |
GAGGCGGAGGATTAGGTGGA+GGG | 0.572076 | 5.2:+64959826 | None:intergenic |
AACCATTTCAACCATAAGCA+CGG | 0.578863 | 5.2:-64960716 | MS.gene81807:CDS |
TTCTTCAAGAGGAAAATGAT+GGG | 0.581764 | 5.2:-64960622 | MS.gene81807:CDS |
ATAGTTATGATATATTGGCT+AGG | 0.585445 | 5.2:-64960511 | MS.gene81807:CDS |
TGATCTACTTCTAAGGGAGG+CGG | 0.588807 | 5.2:+64959810 | None:intergenic |
CCTTTAACGGGACAGTAACA+TGG | 0.593119 | 5.2:+64960773 | None:intergenic |
GTTGGACAACACTTCTAATG+AGG | 0.599282 | 5.2:+64960736 | None:intergenic |
CAGTTACAACATCCAAGAGA+AGG | 0.610194 | 5.2:-64959852 | MS.gene81807:CDS |
TCTACTTCTAAGGGAGGCGG+AGG | 0.624760 | 5.2:+64959813 | None:intergenic |
AAGAATCTTATCCTTCACAT+TGG | 0.625557 | 5.2:+64959952 | None:intergenic |
AAGGGAGGCGGAGGATTAGG+TGG | 0.627554 | 5.2:+64959822 | None:intergenic |
AGAAGAATGGAACTTCAGAT+GGG | 0.634674 | 5.2:+64960478 | None:intergenic |
GAGTTGCTGAAGTAGACCGT+TGG | 0.646802 | 5.2:+64960444 | None:intergenic |
GTCTGATCTACTTCTAAGGG+AGG | 0.653920 | 5.2:+64959807 | None:intergenic |
CTTCTCCGAAGAATGTCCAA+CGG | 0.662024 | 5.2:-64960460 | MS.gene81807:CDS |
GAAGGATAAGATTCTTGACA+AGG | 0.663625 | 5.2:-64959945 | MS.gene81807:CDS |
TGACACGATAGCCAATGTGA+AGG | 0.670745 | 5.2:-64959963 | MS.gene81807:CDS |
ATGCAAATATTCATAGCACA+TGG | 0.683285 | 5.2:-64960022 | MS.gene81807:CDS |
AGGGAGACAATAAGTCAAAG+TGG | 0.684751 | 5.2:-64960830 | MS.gene81807:CDS |
CCATTTCAACCATAAGCACG+GGG | 0.709635 | 5.2:-64960714 | MS.gene81807:CDS |
AGAACTCTCCACCTTCAAGG+GGG | 0.732805 | 5.2:+64959985 | None:intergenic |
GAAGATAAGAGGTACCTTGG+GGG | 0.747023 | 5.2:+64960346 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTCATTATTGATTTATTTGT+TGG | - | chr5.2:64960702-64960721 | MS.gene81807:CDS | 15.0% |
!! | CAATATATCATAACTATAAC+CGG | + | chr5.2:64960247-64960266 | None:intergenic | 20.0% |
!!! | AATAATAGTACTATGCTTTT+GGG | - | chr5.2:64960177-64960196 | MS.gene81807:intron | 20.0% |
!!! | TCTCTAATTGAATTTTCTTA+TGG | - | chr5.2:64960072-64960091 | MS.gene81807:intron | 20.0% |
! | AAACAACGAAAGTAATGAAA+AGG | + | chr5.2:64960442-64960461 | None:intergenic | 25.0% |
! | AAAGAAATCAAAAACACCTT+GGG | + | chr5.2:64960674-64960693 | None:intergenic | 25.0% |
! | AACAAAATCACAACCTTTAA+CGG | + | chr5.2:64960004-64960023 | None:intergenic | 25.0% |
! | ACTGATCCAAAATTGAAAAA+CGG | + | chr5.2:64960572-64960591 | None:intergenic | 25.0% |
! | CGGTTATAGTTATGATATAT+TGG | - | chr5.2:64960245-64960264 | MS.gene81807:intron | 25.0% |
!! | AAAACACTAACAATCCTTTT+TGG | + | chr5.2:64960549-64960568 | None:intergenic | 25.0% |
!! | ATAGTTATGATATATTGGCT+AGG | - | chr5.2:64960250-64960269 | MS.gene81807:intron | 25.0% |
!! | ATGATTCCATTTGGTTATTT+TGG | - | chr5.2:64960357-64960376 | MS.gene81807:intron | 25.0% |
!! | CAATAATAGTACTATGCTTT+TGG | - | chr5.2:64960176-64960195 | MS.gene81807:intron | 25.0% |
!! | CTGATAAATTTGAGATGAAA+TGG | + | chr5.2:64960515-64960534 | None:intergenic | 25.0% |
!! | GAATTTTGTAAGACTATGAT+TGG | + | chr5.2:64960467-64960486 | None:intergenic | 25.0% |
!!! | TGTTTTCCGTTTTTCAATTT+TGG | - | chr5.2:64960563-64960582 | MS.gene81807:CDS | 25.0% |
AAATGAAAAATATGGCTGCA+GGG | - | chr5.2:64959912-64959931 | MS.gene81807:CDS | 30.0% | |
AAGAATCTTATCCTTCACAT+TGG | + | chr5.2:64960812-64960831 | None:intergenic | 30.0% | |
AATGAAAAGGAGAAGATAAG+AGG | + | chr5.2:64960429-64960448 | None:intergenic | 30.0% | |
ACAAAATCACAACCTTTAAC+GGG | + | chr5.2:64960003-64960022 | None:intergenic | 30.0% | |
ATGCAAATATTCATAGCACA+TGG | - | chr5.2:64960739-64960758 | MS.gene81807:CDS | 30.0% | |
GAAAGAAATCAAAAACACCT+TGG | + | chr5.2:64960675-64960694 | None:intergenic | 30.0% | |
GAAGAACCAAAATAACCAAA+TGG | + | chr5.2:64960366-64960385 | None:intergenic | 30.0% | |
TTCTTCAAGAGGAAAATGAT+GGG | - | chr5.2:64960139-64960158 | MS.gene81807:intron | 30.0% | |
! | TGCAGCCATATTTTTCATTT+GGG | + | chr5.2:64959912-64959931 | None:intergenic | 30.0% |
!! | ATGTAAATTTCTAGCTCGAT+TGG | + | chr5.2:64960393-64960412 | None:intergenic | 30.0% |
!! | CAGTTTTTCAAATGCCAAAA+AGG | - | chr5.2:64960532-64960551 | MS.gene81807:CDS | 30.0% |
!!! | AGGTGTTTTTGATTTCTTTC+TGG | - | chr5.2:64960675-64960694 | MS.gene81807:CDS | 30.0% |
!!! | TGTTTTTGATTTCTTTCTGG+TGG | - | chr5.2:64960678-64960697 | MS.gene81807:CDS | 30.0% |
AACCATTTCAACCATAAGCA+CGG | - | chr5.2:64960045-64960064 | MS.gene81807:intron | 35.0% | |
AGAAATTTACATAACCCCCA+AGG | - | chr5.2:64960401-64960420 | MS.gene81807:CDS | 35.0% | |
AGAAGAATGGAACTTCAGAT+GGG | + | chr5.2:64960286-64960305 | None:intergenic | 35.0% | |
AGAATTCAACGAGACAATGA+AGG | + | chr5.2:64960103-64960122 | None:intergenic | 35.0% | |
ATATTCATAGCACATGGTTG+TGG | - | chr5.2:64960745-64960764 | MS.gene81807:CDS | 35.0% | |
CAAATGAAAAATATGGCTGC+AGG | - | chr5.2:64959911-64959930 | MS.gene81807:CDS | 35.0% | |
CAATAAGTCAAAGTGGAAAG+AGG | - | chr5.2:64959938-64959957 | MS.gene81807:CDS | 35.0% | |
CCATGCCCAAATGAAAAATA+TGG | - | chr5.2:64959904-64959923 | MS.gene81807:CDS | 35.0% | |
GAAGGATAAGATTCTTGACA+AGG | - | chr5.2:64960816-64960835 | MS.gene81807:CDS | 35.0% | |
GAGTTTCTCATGATTCCATT+TGG | - | chr5.2:64960348-64960367 | MS.gene81807:intron | 35.0% | |
GTTCTTCAAGAGGAAAATGA+TGG | - | chr5.2:64960138-64960157 | MS.gene81807:intron | 35.0% | |
TGAAGACATTGTTCTTCAAG+AGG | - | chr5.2:64960128-64960147 | MS.gene81807:intron | 35.0% | |
! | CCATATTTTTCATTTGGGCA+TGG | + | chr5.2:64959907-64959926 | None:intergenic | 35.0% |
! | CTGCAGCCATATTTTTCATT+TGG | + | chr5.2:64959913-64959932 | None:intergenic | 35.0% |
!! | TTTGCAACGTTTTGAGCTAA+CGG | + | chr5.2:64959851-64959870 | None:intergenic | 35.0% |
ACCATTTCAACCATAAGCAC+GGG | - | chr5.2:64960046-64960065 | MS.gene81807:intron | 40.0% | |
AGGGAGACAATAAGTCAAAG+TGG | - | chr5.2:64959931-64959950 | MS.gene81807:CDS | 40.0% | |
CAGTTACAACATCCAAGAGA+AGG | - | chr5.2:64960909-64960928 | MS.gene81807:CDS | 40.0% | |
CATTGATGTCAACTCTTCTG+AGG | - | chr5.2:64960221-64960240 | MS.gene81807:intron | 40.0% | |
CGCTGATGTGTTGTAATGAA+GGG | - | chr5.2:64960648-64960667 | MS.gene81807:CDS | 40.0% | |
CTTCTCTTGGATGTTGTAAC+TGG | + | chr5.2:64960911-64960930 | None:intergenic | 40.0% | |
GAGAAGAATGGAACTTCAGA+TGG | + | chr5.2:64960287-64960306 | None:intergenic | 40.0% | |
GTGCTTATGGTTGAAATGGT+TGG | + | chr5.2:64960046-64960065 | None:intergenic | 40.0% | |
GTTGGACAACACTTCTAATG+AGG | + | chr5.2:64960028-64960047 | None:intergenic | 40.0% | |
TTTCATTTGGGCATGGCATT+TGG | + | chr5.2:64959900-64959919 | None:intergenic | 40.0% | |
! | GATTTATTTGTTGGCGACTG+CGG | - | chr5.2:64960711-64960730 | MS.gene81807:CDS | 40.0% |
!! | AGAAGATAAGAGGTACCTTG+GGG | + | chr5.2:64960419-64960438 | None:intergenic | 40.0% |
!! | GAGAAGATAAGAGGTACCTT+GGG | + | chr5.2:64960420-64960439 | None:intergenic | 40.0% |
!! | TTGCAACGTTTTGAGCTAAC+GGG | + | chr5.2:64959850-64959869 | None:intergenic | 40.0% |
CCATGTTACTGTCCCGTTAA+AGG | - | chr5.2:64959988-64960007 | MS.gene81807:CDS | 45.0% | |
CCATTTCAACCATAAGCACG+GGG | - | chr5.2:64960047-64960066 | MS.gene81807:intron | 45.0% | |
CCTTTAACGGGACAGTAACA+TGG | + | chr5.2:64959991-64960010 | None:intergenic | 45.0% | |
CTTCTCCGAAGAATGTCCAA+CGG | - | chr5.2:64960301-64960320 | MS.gene81807:intron | 45.0% | |
GCTGTCATCTAGTAGCTCAT+TGG | + | chr5.2:64960878-64960897 | None:intergenic | 45.0% | |
GGACATTCTTCGGAGAAGAA+TGG | + | chr5.2:64960299-64960318 | None:intergenic | 45.0% | |
GTAGACCGTTGGACATTCTT+CGG | + | chr5.2:64960309-64960328 | None:intergenic | 45.0% | |
TCAGAACTCTCCACCTTCAA+GGG | + | chr5.2:64960781-64960800 | None:intergenic | 45.0% | |
TGACACGATAGCCAATGTGA+AGG | - | chr5.2:64960798-64960817 | MS.gene81807:CDS | 45.0% | |
TGGCAAACATCAGACGTTGT+TGG | + | chr5.2:64960858-64960877 | None:intergenic | 45.0% | |
TTGGATGTTGTAACTGGCGA+GGG | + | chr5.2:64960905-64960924 | None:intergenic | 45.0% | |
! | GCGCTGATGTGTTGTAATGA+AGG | - | chr5.2:64960647-64960666 | MS.gene81807:CDS | 45.0% |
!! | GAAGATAAGAGGTACCTTGG+GGG | + | chr5.2:64960418-64960437 | None:intergenic | 45.0% |
!! | GGAGAAGATAAGAGGTACCT+TGG | + | chr5.2:64960421-64960440 | None:intergenic | 45.0% |
AAAGATGACCCCCTTGAAGG+TGG | - | chr5.2:64960768-64960787 | MS.gene81807:CDS | 50.0% | |
AGAACTCTCCACCTTCAAGG+GGG | + | chr5.2:64960779-64960798 | None:intergenic | 50.0% | |
ATCAGACGTTGTTGGTGCAC+TGG | + | chr5.2:64960850-64960869 | None:intergenic | 50.0% | |
CAGAACTCTCCACCTTCAAG+GGG | + | chr5.2:64960780-64960799 | None:intergenic | 50.0% | |
CCCCGTGCTTATGGTTGAAA+TGG | + | chr5.2:64960050-64960069 | None:intergenic | 50.0% | |
CTTGGATGTTGTAACTGGCG+AGG | + | chr5.2:64960906-64960925 | None:intergenic | 50.0% | |
GAGTTGCTGAAGTAGACCGT+TGG | + | chr5.2:64960320-64960339 | None:intergenic | 50.0% | |
GTCAGAACTCTCCACCTTCA+AGG | + | chr5.2:64960782-64960801 | None:intergenic | 50.0% | |
GTGTTGTAATGAAGGGCCCA+AGG | - | chr5.2:64960655-64960674 | MS.gene81807:CDS | 50.0% | |
TCAGACGTTGTTGGTGCACT+GGG | + | chr5.2:64960849-64960868 | None:intergenic | 50.0% | |
TGGAAAGATGACCCCCTTGA+AGG | - | chr5.2:64960765-64960784 | MS.gene81807:CDS | 50.0% | |
TGTTGTAACTGGCGAGGGTT+TGG | + | chr5.2:64960900-64960919 | None:intergenic | 50.0% | |
TTAGAGAGTCCCCGTGCTTA+TGG | + | chr5.2:64960059-64960078 | None:intergenic | 50.0% | |
!! | GATGTCAACTCTTCTGAGGC+CGG | - | chr5.2:64960225-64960244 | MS.gene81807:intron | 50.0% |
AAGGGAGGCGGAGGATTAGG+TGG | + | chr5.2:64960942-64960961 | None:intergenic | 60.0% | |
GAGGCGGAGGATTAGGTGGA+GGG | + | chr5.2:64960938-64960957 | None:intergenic | 60.0% | |
GGTGGAGGGTTGCCTTCTCT+TGG | + | chr5.2:64960924-64960943 | None:intergenic | 60.0% | |
GGAGGCGGAGGATTAGGTGG+AGG | + | chr5.2:64960939-64960958 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 64959820 | 64960963 | 64959820 | ID=MS.gene81807 |
chr5.2 | mRNA | 64959820 | 64960963 | 64959820 | ID=MS.gene81807.t1;Parent=MS.gene81807 |
chr5.2 | exon | 64960361 | 64960963 | 64960361 | ID=MS.gene81807.t1.exon1;Parent=MS.gene81807.t1 |
chr5.2 | CDS | 64960361 | 64960963 | 64960361 | ID=cds.MS.gene81807.t1;Parent=MS.gene81807.t1 |
chr5.2 | exon | 64959820 | 64960044 | 64959820 | ID=MS.gene81807.t1.exon2;Parent=MS.gene81807.t1 |
chr5.2 | CDS | 64959820 | 64960044 | 64959820 | ID=cds.MS.gene81807.t1;Parent=MS.gene81807.t1 |
Gene Sequence |
Protein sequence |