Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017315.t1 | RHN56826.1 | 69.1 | 246 | 75 | 1 | 3 | 247 | 106 | 351 | 5.70E-89 | 337.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017315.t1 | Q84K34 | 30.8 | 172 | 115 | 2 | 1 | 168 | 169 | 340 | 4.2e-16 | 86.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017315.t1 | G7KFS7 | 69.1 | 246 | 75 | 1 | 3 | 247 | 143 | 388 | 4.1e-89 | 337.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017315.t1 | MTR_5g076720 | 68.548 | 248 | 77 | 1 | 1 | 247 | 141 | 388 | 3.87e-117 | 340 |
MS.gene017315.t1 | MTR_5g076810 | 65.041 | 246 | 83 | 2 | 1 | 245 | 23 | 266 | 1.41e-108 | 314 |
MS.gene017315.t1 | MTR_5g067400 | 63.673 | 245 | 87 | 1 | 1 | 245 | 70 | 312 | 1.37e-104 | 306 |
MS.gene017315.t1 | MTR_7g024290 | 64.634 | 246 | 84 | 2 | 1 | 245 | 70 | 313 | 2.29e-103 | 303 |
MS.gene017315.t1 | MTR_1g046650 | 63.158 | 247 | 88 | 2 | 1 | 247 | 1 | 244 | 1.77e-102 | 298 |
MS.gene017315.t1 | MTR_1g046650 | 63.158 | 247 | 88 | 2 | 1 | 247 | 70 | 313 | 1.51e-101 | 298 |
MS.gene017315.t1 | MTR_1g046650 | 63.158 | 247 | 88 | 2 | 1 | 247 | 70 | 313 | 2.09e-101 | 298 |
MS.gene017315.t1 | MTR_1g046650 | 63.158 | 247 | 88 | 2 | 1 | 247 | 101 | 344 | 1.09e-100 | 297 |
MS.gene017315.t1 | MTR_2g038420 | 61.600 | 250 | 93 | 2 | 1 | 247 | 84 | 333 | 4.76e-99 | 293 |
MS.gene017315.t1 | MTR_1g046640 | 62.041 | 245 | 90 | 2 | 1 | 245 | 70 | 311 | 7.33e-99 | 291 |
MS.gene017315.t1 | MTR_5g076520 | 61.224 | 245 | 93 | 2 | 1 | 243 | 70 | 314 | 8.80e-98 | 289 |
MS.gene017315.t1 | MTR_5g076505 | 58.943 | 246 | 100 | 1 | 1 | 245 | 66 | 311 | 4.72e-96 | 284 |
MS.gene017315.t1 | MTR_5g061290 | 57.200 | 250 | 104 | 1 | 1 | 247 | 76 | 325 | 1.02e-94 | 281 |
MS.gene017315.t1 | MTR_7g094390 | 59.184 | 245 | 98 | 1 | 1 | 245 | 231 | 473 | 2.40e-93 | 283 |
MS.gene017315.t1 | MTR_2g038430 | 57.752 | 258 | 98 | 2 | 1 | 247 | 84 | 341 | 2.59e-93 | 278 |
MS.gene017315.t1 | MTR_5g076660 | 57.661 | 248 | 100 | 2 | 1 | 245 | 92 | 337 | 4.43e-90 | 270 |
MS.gene017315.t1 | MTR_5g076370 | 55.378 | 251 | 106 | 3 | 1 | 248 | 93 | 340 | 4.78e-85 | 257 |
MS.gene017315.t1 | MTR_5g076820 | 62.255 | 204 | 73 | 3 | 1 | 201 | 77 | 279 | 2.72e-80 | 243 |
MS.gene017315.t1 | MTR_5g076540 | 69.811 | 159 | 48 | 0 | 1 | 159 | 70 | 228 | 1.17e-74 | 227 |
MS.gene017315.t1 | MTR_5g077020 | 68.675 | 166 | 46 | 3 | 5 | 168 | 45 | 206 | 1.27e-69 | 214 |
MS.gene017315.t1 | MTR_4g058025 | 70.435 | 115 | 33 | 1 | 12 | 125 | 14 | 128 | 1.14e-48 | 159 |
MS.gene017315.t1 | MTR_4g094468 | 40.828 | 169 | 95 | 3 | 1 | 166 | 156 | 322 | 6.88e-35 | 127 |
MS.gene017315.t1 | MTR_7g105080 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.23e-14 | 67.0 |
MS.gene017315.t1 | MTR_3g092130 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.23e-14 | 67.0 |
MS.gene017315.t1 | MTR_1g059690 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.23e-14 | 67.0 |
MS.gene017315.t1 | MTR_3g092130 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.41e-14 | 67.4 |
MS.gene017315.t1 | MTR_4g088485 | 45.122 | 82 | 45 | 0 | 164 | 245 | 128 | 209 | 9.05e-14 | 68.6 |
MS.gene017315.t1 | MTR_4g088485 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.95e-13 | 66.2 |
MS.gene017315.t1 | MTR_7g116360 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 9.35e-14 | 68.9 |
MS.gene017315.t1 | MTR_7g116360 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 9.35e-14 | 68.9 |
MS.gene017315.t1 | MTR_7g116360 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.50e-13 | 66.6 |
MS.gene017315.t1 | MTR_1g066390 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.02e-13 | 68.9 |
MS.gene017315.t1 | MTR_1g066390 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.02e-13 | 68.9 |
MS.gene017315.t1 | MTR_1g066390 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 7.13e-13 | 66.6 |
MS.gene017315.t1 | MTR_5g092700 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.36e-13 | 67.0 |
MS.gene017315.t1 | MTR_4g073580 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.36e-13 | 67.0 |
MS.gene017315.t1 | MTR_4g080920 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.73e-13 | 68.2 |
MS.gene017315.t1 | MTR_4g080920 | 48.611 | 72 | 37 | 0 | 174 | 245 | 1 | 72 | 4.85e-12 | 64.3 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 1.97e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 1.97e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g081010 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.19e-12 | 66.6 |
MS.gene017315.t1 | MTR_7g116360 | 45.122 | 82 | 45 | 0 | 164 | 245 | 115 | 196 | 2.03e-13 | 68.6 |
MS.gene017315.t1 | MTR_7g116360 | 45.122 | 82 | 45 | 0 | 164 | 245 | 191 | 272 | 2.03e-13 | 68.6 |
MS.gene017315.t1 | MTR_7g116360 | 42.000 | 100 | 56 | 1 | 146 | 245 | 23 | 120 | 1.21e-12 | 66.6 |
MS.gene017315.t1 | MTR_6g061930 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.04e-13 | 68.9 |
MS.gene017315.t1 | MTR_6g061930 | 45.122 | 82 | 45 | 0 | 164 | 245 | 204 | 285 | 2.04e-13 | 68.9 |
MS.gene017315.t1 | MTR_6g061930 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.52e-12 | 66.2 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.07e-13 | 68.6 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.07e-13 | 68.6 |
MS.gene017315.t1 | MTR_8g018230 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.35e-12 | 66.2 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.26e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.26e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.26e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.45e-12 | 66.6 |
MS.gene017315.t1 | MTR_8g088060 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.29e-13 | 66.2 |
MS.gene017315.t1 | MTR_5g033960 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.56e-13 | 66.2 |
MS.gene017315.t1 | MTR_4g073580 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.61e-13 | 66.6 |
MS.gene017315.t1 | MTR_8g081020 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.89e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g081020 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.89e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g081020 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.89e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g081020 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 2.89e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g081020 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.76e-12 | 66.6 |
MS.gene017315.t1 | MTR_4g080797 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.12e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g080797 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.12e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g080797 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.12e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g080797 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.12e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g080797 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.93e-12 | 66.6 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.12e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.12e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.12e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.12e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.93e-12 | 66.6 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.18e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.18e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.18e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.18e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.97e-12 | 66.6 |
MS.gene017315.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.21e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.21e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.21e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 4.30e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g091580 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.95e-12 | 66.6 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.72e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.72e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.72e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.72e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 3.72e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.24e-12 | 66.6 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.72e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.72e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.72e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.72e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 3.72e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.24e-12 | 66.6 |
MS.gene017315.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.97e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.97e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.97e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 3.97e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 447 | 528 | 3.97e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g091580 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 1.67e-12 | 67.0 |
MS.gene017315.t1 | MTR_4g091580 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.36e-12 | 66.6 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 45.122 | 82 | 45 | 0 | 164 | 245 | 447 | 528 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_4g081010 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.48e-12 | 66.6 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 45.122 | 82 | 45 | 0 | 164 | 245 | 447 | 528 | 4.13e-13 | 68.9 |
MS.gene017315.t1 | MTR_8g018230 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.48e-12 | 66.6 |
MS.gene017315.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 5.90e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 5.90e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 5.90e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 5.90e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 5.90e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 447 | 528 | 5.90e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 523 | 604 | 5.90e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 599 | 680 | 5.90e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 675 | 756 | 5.90e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g088495 | 45.122 | 82 | 45 | 0 | 164 | 245 | 751 | 832 | 5.90e-13 | 68.6 |
MS.gene017315.t1 | MTR_4g088495 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.82e-12 | 67.0 |
MS.gene017315.t1 | MTR_7g085590 | 27.273 | 143 | 100 | 1 | 1 | 139 | 111 | 253 | 5.42e-11 | 62.0 |
MS.gene017315.t1 | MTR_5g061310 | 43.056 | 72 | 41 | 0 | 176 | 247 | 4 | 75 | 9.44e-11 | 57.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017315.t1 | AT5G37930 | 30.814 | 172 | 115 | 2 | 1 | 168 | 169 | 340 | 2.10e-18 | 83.6 |
MS.gene017315.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.62e-14 | 68.9 |
MS.gene017315.t1 | AT4G05050 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.98e-13 | 66.6 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.62e-14 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.98e-13 | 66.6 |
MS.gene017315.t1 | AT3G52590 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 7.77e-14 | 67.0 |
MS.gene017315.t1 | AT2G36170 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 7.77e-14 | 67.0 |
MS.gene017315.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 9.80e-14 | 68.9 |
MS.gene017315.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 9.80e-14 | 68.9 |
MS.gene017315.t1 | AT4G05050 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.81e-13 | 66.6 |
MS.gene017315.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 9.80e-14 | 68.9 |
MS.gene017315.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 9.80e-14 | 68.9 |
MS.gene017315.t1 | AT4G05050 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.81e-13 | 66.6 |
MS.gene017315.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 9.80e-14 | 68.9 |
MS.gene017315.t1 | AT4G05050 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 9.80e-14 | 68.9 |
MS.gene017315.t1 | AT4G05050 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.81e-13 | 66.6 |
MS.gene017315.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 9.80e-14 | 68.9 |
MS.gene017315.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 9.80e-14 | 68.9 |
MS.gene017315.t1 | AT4G02890 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.81e-13 | 66.6 |
MS.gene017315.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 9.80e-14 | 68.9 |
MS.gene017315.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 9.80e-14 | 68.9 |
MS.gene017315.t1 | AT4G02890 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 6.81e-13 | 66.6 |
MS.gene017315.t1 | AT1G55060 | 46.341 | 82 | 44 | 0 | 164 | 245 | 67 | 148 | 1.08e-13 | 68.9 |
MS.gene017315.t1 | AT1G55060 | 42.683 | 82 | 47 | 0 | 164 | 245 | 143 | 224 | 2.30e-11 | 62.4 |
MS.gene017315.t1 | AT5G37640 | 45.122 | 82 | 45 | 0 | 164 | 245 | 69 | 150 | 1.10e-13 | 70.1 |
MS.gene017315.t1 | AT5G37640 | 45.783 | 83 | 44 | 1 | 164 | 245 | 221 | 303 | 2.34e-11 | 63.2 |
MS.gene017315.t1 | AT5G37640 | 42.683 | 82 | 47 | 0 | 164 | 245 | 145 | 226 | 6.62e-11 | 62.0 |
MS.gene017315.t1 | AT1G66620 | 27.273 | 176 | 119 | 3 | 1 | 168 | 100 | 274 | 1.16e-13 | 69.7 |
MS.gene017315.t1 | AT1G23410 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.86e-13 | 66.6 |
MS.gene017315.t1 | AT2G35635 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.94e-13 | 66.6 |
MS.gene017315.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G03240 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.38e-12 | 66.6 |
MS.gene017315.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G03240 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.38e-12 | 66.6 |
MS.gene017315.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G03240 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G03240 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.38e-12 | 66.6 |
MS.gene017315.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.16e-13 | 68.9 |
MS.gene017315.t1 | AT5G20620 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.38e-12 | 66.6 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.48e-12 | 66.6 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.48e-12 | 66.6 |
MS.gene017315.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G02890 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.48e-12 | 66.6 |
MS.gene017315.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G02890 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 2.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G02890 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.48e-12 | 66.6 |
MS.gene017315.t1 | AT2G47110 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.28e-13 | 66.2 |
MS.gene017315.t1 | AT2G47110 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.28e-13 | 66.2 |
MS.gene017315.t1 | AT1G31340 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.33e-13 | 66.2 |
MS.gene017315.t1 | AT3G62250 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.38e-13 | 66.2 |
MS.gene017315.t1 | AT1G65350 | 45.122 | 82 | 45 | 0 | 164 | 245 | 142 | 223 | 2.71e-13 | 68.9 |
MS.gene017315.t1 | AT1G65350 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.32e-12 | 66.6 |
MS.gene017315.t1 | AT1G65350 | 43.902 | 82 | 45 | 1 | 164 | 245 | 67 | 147 | 7.89e-11 | 61.6 |
MS.gene017315.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.19e-13 | 68.9 |
MS.gene017315.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.19e-13 | 68.9 |
MS.gene017315.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.19e-13 | 68.9 |
MS.gene017315.t1 | AT5G20620 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.19e-13 | 68.9 |
MS.gene017315.t1 | AT5G20620 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 1.93e-12 | 66.6 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.02e-12 | 66.6 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.02e-12 | 66.6 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.27e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.02e-12 | 66.6 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.90e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.90e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.90e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.90e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 3.90e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.35e-12 | 66.6 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 67 | 148 | 3.90e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 143 | 224 | 3.90e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 219 | 300 | 3.90e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 295 | 376 | 3.90e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 45.122 | 82 | 45 | 0 | 164 | 245 | 371 | 452 | 3.90e-13 | 68.9 |
MS.gene017315.t1 | AT4G05320 | 50.000 | 72 | 36 | 0 | 174 | 245 | 1 | 72 | 2.35e-12 | 66.6 |
MS.gene017315.t1 | AT3G09790 | 46.341 | 82 | 44 | 0 | 164 | 245 | 69 | 150 | 1.42e-12 | 67.4 |
MS.gene017315.t1 | AT3G09790 | 46.341 | 82 | 44 | 0 | 164 | 245 | 69 | 150 | 1.42e-12 | 67.4 |
MS.gene017315.t1 | AT1G53930 | 45.714 | 70 | 38 | 0 | 176 | 245 | 88 | 157 | 1.82e-12 | 63.9 |
MS.gene017315.t1 | AT5G37870 | 29.193 | 161 | 107 | 6 | 1 | 155 | 101 | 260 | 3.70e-11 | 62.4 |
MS.gene017315.t1 | AT1G66650 | 26.816 | 179 | 120 | 6 | 1 | 168 | 142 | 320 | 7.02e-11 | 62.0 |
Find 53 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTCTGATTTCTTAACTCTA+AGG | 0.248144 | 5.1:-59490970 | None:intergenic |
GTTCTTCAAGAGGAAAATTA+TGG | 0.263266 | 5.1:+59490428 | MS.gene017315:CDS |
GCAGTCAATATTTGCTGCTT+TGG | 0.307306 | 5.1:+59490494 | MS.gene017315:CDS |
AATAATAATACTACTCGTTT+AGG | 0.327299 | 5.1:+59490467 | MS.gene017315:CDS |
CTAGGCCCTGTACAAAGATT+TGG | 0.337041 | 5.1:-59490931 | None:intergenic |
ATCTTTGTACAGGGCCTAGA+TGG | 0.339349 | 5.1:+59490935 | MS.gene017315:CDS |
TACTCGGACTCGGGTGTGTC+TGG | 0.357737 | 5.1:-59490518 | None:intergenic |
GCCGCCCAACGTCTGATCTT+TGG | 0.363598 | 5.1:+59491043 | MS.gene017315:CDS |
CTGCAACCATAGTTCACATT+TGG | 0.381729 | 5.1:-59490200 | None:intergenic |
GAGTTTCTTGTGATTCCATT+TGG | 0.389324 | 5.1:+59490638 | MS.gene017315:CDS |
AACAAAGTCACAACCTGAAA+AGG | 0.402082 | 5.1:-59490291 | None:intergenic |
ATCAGACGTTGGGCGGCCAC+TGG | 0.402289 | 5.1:-59491037 | None:intergenic |
TATAAATGTTGTAGTCGAAA+AGG | 0.405882 | 5.1:-59491093 | None:intergenic |
GGTTTCATCATTAGACTTCA+AGG | 0.410456 | 5.1:-59490402 | None:intergenic |
CAAATGTTGGATGTACTAAT+CGG | 0.434605 | 5.1:-59491151 | None:intergenic |
CAAATGTGAACTATGGTTGC+AGG | 0.446645 | 5.1:+59490201 | MS.gene017315:CDS |
TCATGTCCAAATGTGAACTA+TGG | 0.450747 | 5.1:+59490194 | MS.gene017315:CDS |
GTCTGATTTCTTAACTCTAA+GGG | 0.469256 | 5.1:-59490969 | None:intergenic |
GGGTCATATACTTTCCATCT+AGG | 0.473745 | 5.1:-59490949 | None:intergenic |
GCAGATCCAAATCTTTGTAC+AGG | 0.475455 | 5.1:+59490925 | MS.gene017315:intron |
TGTTGTAGTCGAAAAGGGTC+AGG | 0.478699 | 5.1:-59491087 | None:intergenic |
TATTGCAAAGAATGTCCAAC+AGG | 0.484330 | 5.1:+59490592 | MS.gene017315:CDS |
CAATATATCATAACTATACT+CGG | 0.493864 | 5.1:-59490534 | None:intergenic |
ATAAATGTTGTAGTCGAAAA+GGG | 0.494936 | 5.1:-59491092 | None:intergenic |
AAAGGGTCAGGTTTCCATCC+AGG | 0.513561 | 5.1:-59491075 | None:intergenic |
AGAGGTTCAGAAGAACCAAA+TGG | 0.514036 | 5.1:-59490653 | None:intergenic |
GATCTTTGGCAGTAGATACC+TGG | 0.533839 | 5.1:+59491057 | MS.gene017315:CDS |
TGAAACCATTGTTCTTCAAG+AGG | 0.538905 | 5.1:+59490418 | MS.gene017315:CDS |
ACAAAGTCACAACCTGAAAA+GGG | 0.540410 | 5.1:-59490290 | None:intergenic |
AGACTTCAAGGAGACAATGA+AGG | 0.541721 | 5.1:-59490390 | None:intergenic |
ATGCAAATTTCTAGCTTGAG+AGG | 0.547282 | 5.1:-59490671 | None:intergenic |
AGGGACAGTAACATGGCTTA+CGG | 0.547857 | 5.1:-59490271 | None:intergenic |
ACTGCCAAAGATCAGACGTT+GGG | 0.548550 | 5.1:-59491047 | None:intergenic |
AAATAAGTTACACTAGAAAG+AGG | 0.554335 | 5.1:+59490228 | MS.gene017315:CDS |
TCAGACGTTGGGCGGCCACT+GGG | 0.557324 | 5.1:-59491036 | None:intergenic |
GAATCATTCCTCTCACTCTA+CGG | 0.561502 | 5.1:+59491118 | MS.gene017315:CDS |
GGTGGACAATTGTCAAATGT+TGG | 0.563243 | 5.1:-59491164 | None:intergenic |
GATTTGCTAAAGTAACCTGT+TGG | 0.564767 | 5.1:-59490607 | None:intergenic |
ATCATAACTATACTCGGACT+CGG | 0.565356 | 5.1:-59490528 | None:intergenic |
TGCATTTCAGCGATAAACAC+GGG | 0.578429 | 5.1:+59490336 | MS.gene017315:CDS |
TCATAACTATACTCGGACTC+GGG | 0.578996 | 5.1:-59490527 | None:intergenic |
CCTGAAAAGGGACAGTAACA+TGG | 0.591203 | 5.1:-59490278 | None:intergenic |
ATCGTCTTCCGTAGAGTGAG+AGG | 0.594396 | 5.1:-59491126 | None:intergenic |
GCCAAAGATCAGACGTTGGG+CGG | 0.601874 | 5.1:-59491044 | None:intergenic |
CAGATCCAAATCTTTGTACA+GGG | 0.609183 | 5.1:+59490926 | MS.gene017315:intron |
GTGCATTTCAGCGATAAACA+CGG | 0.612101 | 5.1:+59490335 | MS.gene017315:CDS |
AAATGTGAACTATGGTTGCA+GGG | 0.614511 | 5.1:+59490202 | MS.gene017315:CDS |
TTGCATTCACGTAACCTCCA+CGG | 0.623413 | 5.1:+59490688 | MS.gene017315:CDS |
TACTGCCAAAGATCAGACGT+TGG | 0.646446 | 5.1:-59491048 | None:intergenic |
TTTGGCAGTAGATACCTGGA+TGG | 0.649571 | 5.1:+59491061 | MS.gene017315:CDS |
GCATTTCAGCGATAAACACG+GGG | 0.695447 | 5.1:+59490337 | MS.gene017315:CDS |
GGATATAGTAAATACCGTGG+AGG | 0.704152 | 5.1:-59490702 | None:intergenic |
TGACAAGACTAAGATCCCAG+TGG | 0.772185 | 5.1:+59491021 | MS.gene017315:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTCTTTTATTGATTTAA+TGG | + | chr5.1:59490892-59490911 | MS.gene017315:intron | 10.0% |
!!! | ATCAAATCAAATTTTCTTAT+GGG | + | chr5.1:59490363-59490382 | MS.gene017315:CDS | 15.0% |
!!! | TATCAAATCAAATTTTCTTA+TGG | + | chr5.1:59490362-59490381 | MS.gene017315:CDS | 15.0% |
!! | AATAATAATACTACTCGTTT+AGG | + | chr5.1:59490467-59490486 | MS.gene017315:CDS | 20.0% |
!! | CAATATATCATAACTATACT+CGG | - | chr5.1:59490537-59490556 | None:intergenic | 20.0% |
!! | GCAAATTATCTCTAATTTAT+CGG | + | chr5.1:59490795-59490814 | MS.gene017315:intron | 20.0% |
!! | TAAAATACCAAGATTTCAAT+AGG | - | chr5.1:59490750-59490769 | None:intergenic | 20.0% |
! | AAATAAGTTACACTAGAAAG+AGG | + | chr5.1:59490228-59490247 | MS.gene017315:CDS | 25.0% |
! | AAATAGCCAAAACAAAGAAT+AGG | - | chr5.1:59490726-59490745 | None:intergenic | 25.0% |
! | ATAAATGTTGTAGTCGAAAA+GGG | - | chr5.1:59491095-59491114 | None:intergenic | 25.0% |
! | TATAAATGTTGTAGTCGAAA+AGG | - | chr5.1:59491096-59491115 | None:intergenic | 25.0% |
!! | CTATTTTCCTATTGAAATCT+TGG | + | chr5.1:59490740-59490759 | MS.gene017315:intron | 25.0% |
!!! | AAACACAAACAACCTTTTTT+TGG | - | chr5.1:59490832-59490851 | None:intergenic | 25.0% |
!!! | CTATATCCTATTCTTTGTTT+TGG | + | chr5.1:59490717-59490736 | MS.gene017315:intron | 25.0% |
!!! | TATTGATTTAATGGCAATTG+TGG | + | chr5.1:59490901-59490920 | MS.gene017315:intron | 25.0% |
ATAGGATATAGTAAATACCG+TGG | - | chr5.1:59490708-59490727 | None:intergenic | 30.0% | |
CAAATGTTGGATGTACTAAT+CGG | - | chr5.1:59491154-59491173 | None:intergenic | 30.0% | |
GTCTGATTTCTTAACTCTAA+GGG | - | chr5.1:59490972-59490991 | None:intergenic | 30.0% | |
GTTCTTCAAGAGGAAAATTA+TGG | + | chr5.1:59490428-59490447 | MS.gene017315:CDS | 30.0% | |
TGTCTGATTTCTTAACTCTA+AGG | - | chr5.1:59490973-59490992 | None:intergenic | 30.0% | |
! | ATTTTCCTCTTGAAGAACAA+TGG | - | chr5.1:59490426-59490445 | None:intergenic | 30.0% |
!! | GTTTTTCAAACGCCAAAAAA+AGG | + | chr5.1:59490817-59490836 | MS.gene017315:intron | 30.0% |
AAATGTGAACTATGGTTGCA+GGG | + | chr5.1:59490202-59490221 | MS.gene017315:CDS | 35.0% | |
AACAAAGTCACAACCTGAAA+AGG | - | chr5.1:59490294-59490313 | None:intergenic | 35.0% | |
ACAAAGTCACAACCTGAAAA+GGG | - | chr5.1:59490293-59490312 | None:intergenic | 35.0% | |
ATCATAACTATACTCGGACT+CGG | - | chr5.1:59490531-59490550 | None:intergenic | 35.0% | |
CAGATCCAAATCTTTGTACA+GGG | + | chr5.1:59490926-59490945 | MS.gene017315:intron | 35.0% | |
GAGTTTCTTGTGATTCCATT+TGG | + | chr5.1:59490638-59490657 | MS.gene017315:CDS | 35.0% | |
GGTTTCATCATTAGACTTCA+AGG | - | chr5.1:59490405-59490424 | None:intergenic | 35.0% | |
TATTGCAAAGAATGTCCAAC+AGG | + | chr5.1:59490592-59490611 | MS.gene017315:CDS | 35.0% | |
TCATGTCCAAATGTGAACTA+TGG | + | chr5.1:59490194-59490213 | MS.gene017315:CDS | 35.0% | |
TGAAACCATTGTTCTTCAAG+AGG | + | chr5.1:59490418-59490437 | MS.gene017315:CDS | 35.0% | |
!! | ATGCAAATTTCTAGCTTGAG+AGG | - | chr5.1:59490674-59490693 | None:intergenic | 35.0% |
!! | GATTTGCTAAAGTAACCTGT+TGG | - | chr5.1:59490610-59490629 | None:intergenic | 35.0% |
AGACTTCAAGGAGACAATGA+AGG | - | chr5.1:59490393-59490412 | None:intergenic | 40.0% | |
AGAGGTTCAGAAGAACCAAA+TGG | - | chr5.1:59490656-59490675 | None:intergenic | 40.0% | |
CAAATGTGAACTATGGTTGC+AGG | + | chr5.1:59490201-59490220 | MS.gene017315:CDS | 40.0% | |
CTGCAACCATAGTTCACATT+TGG | - | chr5.1:59490203-59490222 | None:intergenic | 40.0% | |
GAATCATTCCTCTCACTCTA+CGG | + | chr5.1:59491118-59491137 | MS.gene017315:CDS | 40.0% | |
GCAGATCCAAATCTTTGTAC+AGG | + | chr5.1:59490925-59490944 | MS.gene017315:intron | 40.0% | |
GGATATAGTAAATACCGTGG+AGG | - | chr5.1:59490705-59490724 | None:intergenic | 40.0% | |
GGGTCATATACTTTCCATCT+AGG | - | chr5.1:59490952-59490971 | None:intergenic | 40.0% | |
GTGCATTTCAGCGATAAACA+CGG | + | chr5.1:59490335-59490354 | MS.gene017315:CDS | 40.0% | |
TCATAACTATACTCGGACTC+GGG | - | chr5.1:59490530-59490549 | None:intergenic | 40.0% | |
TGCATTTCAGCGATAAACAC+GGG | + | chr5.1:59490336-59490355 | MS.gene017315:CDS | 40.0% | |
! | GCAGTCAATATTTGCTGCTT+TGG | + | chr5.1:59490494-59490513 | MS.gene017315:CDS | 40.0% |
ACTGCCAAAGATCAGACGTT+GGG | - | chr5.1:59491050-59491069 | None:intergenic | 45.0% | |
AGGGACAGTAACATGGCTTA+CGG | - | chr5.1:59490274-59490293 | None:intergenic | 45.0% | |
ATCTTTGTACAGGGCCTAGA+TGG | + | chr5.1:59490935-59490954 | MS.gene017315:CDS | 45.0% | |
CCTGAAAAGGGACAGTAACA+TGG | - | chr5.1:59490281-59490300 | None:intergenic | 45.0% | |
CTAGGCCCTGTACAAAGATT+TGG | - | chr5.1:59490934-59490953 | None:intergenic | 45.0% | |
GATCTTTGGCAGTAGATACC+TGG | + | chr5.1:59491057-59491076 | MS.gene017315:CDS | 45.0% | |
GCATTTCAGCGATAAACACG+GGG | + | chr5.1:59490337-59490356 | MS.gene017315:CDS | 45.0% | |
TACTGCCAAAGATCAGACGT+TGG | - | chr5.1:59491051-59491070 | None:intergenic | 45.0% | |
TGACAAGACTAAGATCCCAG+TGG | + | chr5.1:59491021-59491040 | MS.gene017315:CDS | 45.0% | |
TGTTGTAGTCGAAAAGGGTC+AGG | - | chr5.1:59491090-59491109 | None:intergenic | 45.0% | |
TTGCATTCACGTAACCTCCA+CGG | + | chr5.1:59490688-59490707 | MS.gene017315:CDS | 45.0% | |
TTTGGCAGTAGATACCTGGA+TGG | + | chr5.1:59491061-59491080 | MS.gene017315:CDS | 45.0% | |
! | CCATGTTACTGTCCCTTTTC+AGG | + | chr5.1:59490278-59490297 | MS.gene017315:CDS | 45.0% |
AAAGGGTCAGGTTTCCATCC+AGG | - | chr5.1:59491078-59491097 | None:intergenic | 50.0% | |
ATCGTCTTCCGTAGAGTGAG+AGG | - | chr5.1:59491129-59491148 | None:intergenic | 50.0% | |
GCCAAAGATCAGACGTTGGG+CGG | - | chr5.1:59491047-59491066 | None:intergenic | 55.0% | |
GCCGCCCAACGTCTGATCTT+TGG | + | chr5.1:59491043-59491062 | MS.gene017315:CDS | 60.0% | |
TACTCGGACTCGGGTGTGTC+TGG | - | chr5.1:59490521-59490540 | None:intergenic | 60.0% | |
ATCAGACGTTGGGCGGCCAC+TGG | - | chr5.1:59491040-59491059 | None:intergenic | 65.0% | |
TCAGACGTTGGGCGGCCACT+GGG | - | chr5.1:59491039-59491058 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 59490191 | 59491174 | 59490191 | ID=MS.gene017315 |
chr5.1 | mRNA | 59490191 | 59491174 | 59490191 | ID=MS.gene017315.t1;Parent=MS.gene017315 |
chr5.1 | exon | 59490191 | 59490709 | 59490191 | ID=MS.gene017315.t1.exon1;Parent=MS.gene017315.t1 |
chr5.1 | CDS | 59490191 | 59490709 | 59490191 | ID=cds.MS.gene017315.t1;Parent=MS.gene017315.t1 |
chr5.1 | exon | 59490929 | 59491174 | 59490929 | ID=MS.gene017315.t1.exon2;Parent=MS.gene017315.t1 |
chr5.1 | CDS | 59490929 | 59491174 | 59490929 | ID=cds.MS.gene017315.t1;Parent=MS.gene017315.t1 |
Gene Sequence |
Protein sequence |