Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009570.t1 | RHN56826.1 | 70.7 | 222 | 64 | 1 | 2 | 222 | 125 | 346 | 3.30E-81 | 311.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009570.t1 | P0CG70 | 48.1 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 8.2e-12 | 72.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009570.t1 | G7KFS7 | 70.7 | 222 | 64 | 1 | 2 | 222 | 162 | 383 | 2.4e-81 | 311.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009570.t1 | MTR_5g076720 | 70.175 | 228 | 66 | 2 | 2 | 227 | 162 | 389 | 2.91e-104 | 308 |
MS.gene009570.t1 | MTR_5g076810 | 65.766 | 222 | 73 | 2 | 2 | 222 | 44 | 263 | 4.11e-94 | 278 |
MS.gene009570.t1 | MTR_1g046640 | 63.801 | 221 | 78 | 1 | 2 | 222 | 90 | 308 | 4.41e-90 | 269 |
MS.gene009570.t1 | MTR_5g067400 | 63.801 | 221 | 78 | 1 | 2 | 222 | 91 | 309 | 5.57e-89 | 266 |
MS.gene009570.t1 | MTR_1g046650 | 63.470 | 219 | 78 | 1 | 2 | 220 | 21 | 237 | 8.87e-89 | 263 |
MS.gene009570.t1 | MTR_2g038420 | 62.174 | 230 | 83 | 3 | 2 | 227 | 105 | 334 | 8.54e-88 | 264 |
MS.gene009570.t1 | MTR_1g046650 | 63.470 | 219 | 78 | 1 | 2 | 220 | 90 | 306 | 1.28e-87 | 263 |
MS.gene009570.t1 | MTR_1g046650 | 63.470 | 219 | 78 | 1 | 2 | 220 | 90 | 306 | 3.61e-87 | 261 |
MS.gene009570.t1 | MTR_1g046650 | 63.470 | 219 | 78 | 1 | 2 | 220 | 121 | 337 | 6.06e-87 | 262 |
MS.gene009570.t1 | MTR_7g024290 | 61.947 | 226 | 83 | 2 | 2 | 226 | 91 | 314 | 2.74e-85 | 257 |
MS.gene009570.t1 | MTR_5g061290 | 57.589 | 224 | 92 | 1 | 2 | 222 | 97 | 320 | 1.24e-82 | 250 |
MS.gene009570.t1 | MTR_2g038430 | 58.403 | 238 | 87 | 3 | 2 | 227 | 105 | 342 | 7.22e-82 | 249 |
MS.gene009570.t1 | MTR_5g076505 | 57.658 | 222 | 93 | 1 | 2 | 222 | 87 | 308 | 9.38e-82 | 248 |
MS.gene009570.t1 | MTR_5g076520 | 60.090 | 223 | 87 | 2 | 2 | 222 | 91 | 313 | 1.13e-80 | 245 |
MS.gene009570.t1 | MTR_7g094390 | 59.361 | 219 | 87 | 1 | 2 | 220 | 252 | 468 | 1.86e-79 | 247 |
MS.gene009570.t1 | MTR_5g076660 | 57.143 | 231 | 94 | 2 | 2 | 229 | 113 | 341 | 2.04e-76 | 235 |
MS.gene009570.t1 | MTR_5g076370 | 53.571 | 224 | 99 | 2 | 2 | 222 | 114 | 335 | 1.36e-69 | 218 |
MS.gene009570.t1 | MTR_5g076820 | 62.295 | 183 | 65 | 3 | 2 | 181 | 98 | 279 | 2.57e-67 | 210 |
MS.gene009570.t1 | MTR_5g076540 | 68.841 | 138 | 43 | 0 | 2 | 139 | 91 | 228 | 9.08e-61 | 192 |
MS.gene009570.t1 | MTR_5g077020 | 67.785 | 149 | 42 | 3 | 2 | 148 | 62 | 206 | 1.65e-57 | 183 |
MS.gene009570.t1 | MTR_4g058025 | 70.476 | 105 | 30 | 1 | 2 | 105 | 24 | 128 | 1.89e-43 | 145 |
MS.gene009570.t1 | MTR_4g094468 | 39.073 | 151 | 91 | 1 | 2 | 152 | 177 | 326 | 1.07e-25 | 103 |
MS.gene009570.t1 | MTR_4g088485 | 48.101 | 79 | 41 | 0 | 144 | 222 | 128 | 206 | 2.02e-15 | 73.2 |
MS.gene009570.t1 | MTR_4g088485 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.79e-14 | 70.5 |
MS.gene009570.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.55e-15 | 73.2 |
MS.gene009570.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.55e-15 | 73.2 |
MS.gene009570.t1 | MTR_7g116360 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.94e-14 | 70.9 |
MS.gene009570.t1 | MTR_1g066390 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.66e-15 | 73.2 |
MS.gene009570.t1 | MTR_1g066390 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.66e-15 | 73.2 |
MS.gene009570.t1 | MTR_1g066390 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.04e-14 | 70.9 |
MS.gene009570.t1 | MTR_5g092700 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.98e-15 | 70.9 |
MS.gene009570.t1 | MTR_4g073580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.98e-15 | 70.9 |
MS.gene009570.t1 | MTR_4g080920 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.32e-15 | 72.4 |
MS.gene009570.t1 | MTR_4g080920 | 52.174 | 69 | 33 | 0 | 154 | 222 | 1 | 69 | 1.74e-13 | 68.2 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.83e-15 | 72.8 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 5.83e-15 | 72.8 |
MS.gene009570.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.12e-14 | 70.5 |
MS.gene009570.t1 | MTR_6g061930 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.94e-15 | 73.2 |
MS.gene009570.t1 | MTR_6g061930 | 48.101 | 79 | 41 | 0 | 144 | 222 | 204 | 282 | 5.94e-15 | 73.2 |
MS.gene009570.t1 | MTR_6g061930 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.66e-14 | 70.5 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.20e-15 | 73.2 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.20e-15 | 73.2 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.20e-15 | 73.2 |
MS.gene009570.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.36e-14 | 70.9 |
MS.gene009570.t1 | MTR_7g105080 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.17e-15 | 69.7 |
MS.gene009570.t1 | MTR_3g092130 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.17e-15 | 69.7 |
MS.gene009570.t1 | MTR_1g059690 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.17e-15 | 69.7 |
MS.gene009570.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 115 | 193 | 8.40e-15 | 72.8 |
MS.gene009570.t1 | MTR_7g116360 | 48.101 | 79 | 41 | 0 | 144 | 222 | 191 | 269 | 8.40e-15 | 72.8 |
MS.gene009570.t1 | MTR_7g116360 | 53.623 | 69 | 32 | 0 | 154 | 222 | 49 | 117 | 6.70e-14 | 70.1 |
MS.gene009570.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 8.83e-15 | 73.6 |
MS.gene009570.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 8.83e-15 | 73.6 |
MS.gene009570.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 8.83e-15 | 73.6 |
MS.gene009570.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.16e-14 | 73.2 |
MS.gene009570.t1 | MTR_4g091580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.93e-14 | 71.2 |
MS.gene009570.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.17e-15 | 73.6 |
MS.gene009570.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.17e-15 | 73.6 |
MS.gene009570.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.17e-15 | 73.6 |
MS.gene009570.t1 | MTR_8g081020 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.17e-15 | 73.6 |
MS.gene009570.t1 | MTR_8g081020 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.04e-14 | 70.9 |
MS.gene009570.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.26e-15 | 73.6 |
MS.gene009570.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.26e-15 | 73.6 |
MS.gene009570.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.26e-15 | 73.6 |
MS.gene009570.t1 | MTR_4g080797 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.26e-15 | 73.6 |
MS.gene009570.t1 | MTR_4g080797 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.16e-14 | 70.9 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.26e-15 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.26e-15 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.26e-15 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.26e-15 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.16e-14 | 70.9 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.81e-15 | 73.2 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.81e-15 | 73.2 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.81e-15 | 73.2 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.81e-15 | 73.2 |
MS.gene009570.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.46e-14 | 70.9 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.03e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.03e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.11e-14 | 70.1 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.16e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.16e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.16e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.16e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.16e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.62e-14 | 70.9 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.16e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.16e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.16e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.16e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.16e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.62e-14 | 70.9 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.21e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.21e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.21e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.21e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.21e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 1.21e-14 | 73.6 |
MS.gene009570.t1 | MTR_8g018230 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.80e-14 | 71.2 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.25e-14 | 73.6 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.25e-14 | 73.6 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.25e-14 | 73.6 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.25e-14 | 73.6 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.25e-14 | 73.6 |
MS.gene009570.t1 | MTR_4g081010 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 1.25e-14 | 73.6 |
MS.gene009570.t1 | MTR_4g081010 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.10e-14 | 70.9 |
MS.gene009570.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.30e-14 | 73.2 |
MS.gene009570.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.30e-14 | 73.2 |
MS.gene009570.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.30e-14 | 73.2 |
MS.gene009570.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.30e-14 | 73.2 |
MS.gene009570.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 1.30e-14 | 73.2 |
MS.gene009570.t1 | MTR_4g091580 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 5.57e-14 | 71.6 |
MS.gene009570.t1 | MTR_4g091580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 8.33e-14 | 70.9 |
MS.gene009570.t1 | MTR_4g073580 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.36e-14 | 70.5 |
MS.gene009570.t1 | MTR_3g092130 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.68e-14 | 68.9 |
MS.gene009570.t1 | MTR_8g088060 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.20e-14 | 68.9 |
MS.gene009570.t1 | MTR_5g033960 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.34e-14 | 68.9 |
MS.gene009570.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 3.23e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 3.23e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 3.23e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 3.23e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 3.23e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 447 | 525 | 3.23e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 523 | 601 | 3.23e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 599 | 677 | 3.23e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 675 | 753 | 3.23e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g088495 | 48.101 | 79 | 41 | 0 | 144 | 222 | 751 | 829 | 3.23e-14 | 72.4 |
MS.gene009570.t1 | MTR_4g088495 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.01e-13 | 70.9 |
MS.gene009570.t1 | MTR_5g061310 | 45.205 | 73 | 39 | 1 | 156 | 227 | 4 | 76 | 1.39e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009570.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.60e-16 | 73.2 |
MS.gene009570.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.32e-15 | 70.9 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.60e-16 | 73.2 |
MS.gene009570.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 5.32e-15 | 70.9 |
MS.gene009570.t1 | AT1G55060 | 45.977 | 87 | 47 | 0 | 136 | 222 | 59 | 145 | 1.44e-15 | 73.9 |
MS.gene009570.t1 | AT1G55060 | 45.570 | 79 | 43 | 0 | 144 | 222 | 143 | 221 | 3.94e-13 | 67.4 |
MS.gene009570.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.67e-15 | 73.2 |
MS.gene009570.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.67e-15 | 73.2 |
MS.gene009570.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 70.9 |
MS.gene009570.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.67e-15 | 73.2 |
MS.gene009570.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.67e-15 | 73.2 |
MS.gene009570.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 70.9 |
MS.gene009570.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.67e-15 | 73.2 |
MS.gene009570.t1 | AT4G05050 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.67e-15 | 73.2 |
MS.gene009570.t1 | AT4G05050 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 70.9 |
MS.gene009570.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.67e-15 | 73.2 |
MS.gene009570.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.67e-15 | 73.2 |
MS.gene009570.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 70.9 |
MS.gene009570.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 2.67e-15 | 73.2 |
MS.gene009570.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 2.67e-15 | 73.2 |
MS.gene009570.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 70.9 |
MS.gene009570.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G03240 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.22e-14 | 70.9 |
MS.gene009570.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G03240 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.22e-14 | 70.9 |
MS.gene009570.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G03240 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G03240 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.22e-14 | 70.9 |
MS.gene009570.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 5.94e-15 | 73.6 |
MS.gene009570.t1 | AT5G20620 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.22e-14 | 70.9 |
MS.gene009570.t1 | AT2G35635 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.28e-15 | 70.5 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.44e-14 | 70.9 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.44e-14 | 70.9 |
MS.gene009570.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.44e-14 | 70.9 |
MS.gene009570.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G02890 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 6.31e-15 | 73.2 |
MS.gene009570.t1 | AT4G02890 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.44e-14 | 70.9 |
MS.gene009570.t1 | AT1G31340 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.81e-15 | 70.5 |
MS.gene009570.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.56e-15 | 73.6 |
MS.gene009570.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.56e-15 | 73.6 |
MS.gene009570.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.56e-15 | 73.6 |
MS.gene009570.t1 | AT5G20620 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.56e-15 | 73.6 |
MS.gene009570.t1 | AT5G20620 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.35e-14 | 70.9 |
MS.gene009570.t1 | AT1G65350 | 48.101 | 79 | 41 | 0 | 144 | 222 | 142 | 220 | 9.59e-15 | 72.8 |
MS.gene009570.t1 | AT1G65350 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 4.62e-14 | 70.9 |
MS.gene009570.t1 | AT1G65350 | 46.835 | 79 | 41 | 1 | 144 | 222 | 67 | 144 | 2.96e-12 | 65.9 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.45e-14 | 70.9 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.45e-14 | 70.9 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 9.70e-15 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 6.45e-14 | 70.9 |
MS.gene009570.t1 | AT3G52590 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.05e-14 | 69.3 |
MS.gene009570.t1 | AT2G36170 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.05e-14 | 69.3 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.22e-14 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.22e-14 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.22e-14 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.22e-14 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.22e-14 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.98e-14 | 70.9 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 67 | 145 | 1.22e-14 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 143 | 221 | 1.22e-14 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 219 | 297 | 1.22e-14 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 295 | 373 | 1.22e-14 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 48.101 | 79 | 41 | 0 | 144 | 222 | 371 | 449 | 1.22e-14 | 73.6 |
MS.gene009570.t1 | AT4G05320 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 7.98e-14 | 70.9 |
MS.gene009570.t1 | AT1G23410 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 1.67e-14 | 69.3 |
MS.gene009570.t1 | AT2G47110 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 69.3 |
MS.gene009570.t1 | AT2G47110 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.03e-14 | 69.3 |
MS.gene009570.t1 | AT3G62250 | 53.623 | 69 | 32 | 0 | 154 | 222 | 1 | 69 | 2.54e-14 | 68.9 |
MS.gene009570.t1 | AT5G37640 | 46.835 | 79 | 42 | 0 | 144 | 222 | 69 | 147 | 2.69e-14 | 71.6 |
MS.gene009570.t1 | AT5G37640 | 44.304 | 79 | 44 | 0 | 144 | 222 | 145 | 223 | 5.49e-12 | 65.1 |
MS.gene009570.t1 | AT5G37640 | 46.250 | 80 | 42 | 1 | 144 | 222 | 221 | 300 | 1.55e-11 | 63.9 |
MS.gene009570.t1 | AT5G37930 | 29.801 | 151 | 102 | 2 | 2 | 148 | 190 | 340 | 5.29e-13 | 68.2 |
MS.gene009570.t1 | AT3G09790 | 46.835 | 79 | 42 | 0 | 144 | 222 | 69 | 147 | 5.32e-13 | 68.6 |
MS.gene009570.t1 | AT3G09790 | 50.000 | 70 | 35 | 0 | 153 | 222 | 2 | 71 | 1.12e-11 | 64.7 |
MS.gene009570.t1 | AT3G09790 | 43.478 | 92 | 42 | 3 | 144 | 225 | 459 | 550 | 5.62e-11 | 62.8 |
MS.gene009570.t1 | AT3G09790 | 46.835 | 79 | 42 | 0 | 144 | 222 | 69 | 147 | 5.32e-13 | 68.6 |
MS.gene009570.t1 | AT3G09790 | 50.000 | 70 | 35 | 0 | 153 | 222 | 2 | 71 | 1.12e-11 | 64.7 |
MS.gene009570.t1 | AT3G09790 | 43.478 | 92 | 42 | 3 | 144 | 225 | 459 | 550 | 5.62e-11 | 62.8 |
MS.gene009570.t1 | AT1G53930 | 46.479 | 71 | 38 | 0 | 156 | 226 | 88 | 158 | 2.40e-12 | 63.5 |
Find 52 sgRNAs with CRISPR-Local
Find 68 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTCTGATTTCTTAACTCTA+AGG | 0.248144 | 5.3:-61953581 | None:intergenic |
GTTCTTCAAGAGGAAAATTA+TGG | 0.263266 | 5.3:+61953039 | MS.gene009570:CDS |
CTAGGCCCTTTACAAAGATT+TGG | 0.273442 | 5.3:-61953542 | None:intergenic |
GCAGTCAATATTTGCTGCTT+TGG | 0.307306 | 5.3:+61953105 | MS.gene009570:CDS |
GTCTCACTCCAGCGTTCTCT+TGG | 0.353127 | 5.3:+61953738 | MS.gene009570:CDS |
ATCTTTGTAAAGGGCCTAGA+TGG | 0.353834 | 5.3:+61953546 | MS.gene009570:CDS |
TACTCGGACTCGGGTGTGTC+TGG | 0.357737 | 5.3:-61953129 | None:intergenic |
AGAAACTCTGATAAAAGATT+TGG | 0.363388 | 5.3:-61953234 | None:intergenic |
CATCTCGTCAACGGCGGAAA+AGG | 0.365718 | 5.3:-61953825 | None:intergenic |
ACTAATCGCCAATCGTCTTC+CGG | 0.382591 | 5.3:-61953771 | None:intergenic |
AACAAAGTCACAACCTGAAA+AGG | 0.402082 | 5.3:-61952902 | None:intergenic |
GGTTTCATCATTAGACTTCA+AGG | 0.410456 | 5.3:-61953013 | None:intergenic |
TATAGATGTTGTAGTCGAAA+AGG | 0.428331 | 5.3:-61953704 | None:intergenic |
AAAGGGTCAGGTTTCCATAT+AGG | 0.437972 | 5.3:-61953686 | None:intergenic |
ATCAGACGTTGAGCGGCCAC+TGG | 0.450646 | 5.3:-61953648 | None:intergenic |
GGGTCATACACTTTCCATCT+AGG | 0.451359 | 5.3:-61953560 | None:intergenic |
GTCTGATTTCTTAACTCTAA+GGG | 0.469256 | 5.3:-61953580 | None:intergenic |
TATTGCAAAGAATGTCCAAC+AGG | 0.484330 | 5.3:+61953203 | MS.gene009570:CDS |
TCTCACTCCAGCGTTCTCTT+GGG | 0.485099 | 5.3:+61953739 | MS.gene009570:CDS |
CAGATCCAAATCTTTGTAAA+GGG | 0.487025 | 5.3:+61953537 | MS.gene009570:intron |
TGTTGTAGTCGAAAAGGGTC+AGG | 0.487757 | 5.3:-61953698 | None:intergenic |
AGAGGTTCAGAAGAATCAAA+TGG | 0.487848 | 5.3:-61953264 | None:intergenic |
CAATATATCATAACTATACT+CGG | 0.493864 | 5.3:-61953145 | None:intergenic |
GCAGATCCAAATCTTTGTAA+AGG | 0.495328 | 5.3:+61953536 | MS.gene009570:intron |
ATAGATGTTGTAGTCGAAAA+GGG | 0.531303 | 5.3:-61953703 | None:intergenic |
TGAAACCATTGTTCTTCAAG+AGG | 0.538905 | 5.3:+61953029 | MS.gene009570:CDS |
ACAAAGTCACAACCTGAAAA+GGG | 0.540410 | 5.3:-61952901 | None:intergenic |
AGACTTCAAGGAGACAATGA+AGG | 0.541721 | 5.3:-61953001 | None:intergenic |
CTAGACGGCCGGAAGACGAT+TGG | 0.543135 | 5.3:+61953763 | MS.gene009570:CDS |
TTCTCTTGGGACTAGACGGC+CGG | 0.543462 | 5.3:+61953752 | MS.gene009570:CDS |
ATGCAAATTTCTAGCTTGAG+AGG | 0.547282 | 5.3:-61953282 | None:intergenic |
AGGGACAGTAACATGGCTTA+CGG | 0.547857 | 5.3:-61952882 | None:intergenic |
GGTGGACAATTGTCAAATGT+TGG | 0.563243 | 5.3:-61953798 | None:intergenic |
ATCATAACTATACTCGGACT+CGG | 0.565356 | 5.3:-61953139 | None:intergenic |
GTCAACGGCGGAAAAGGATG+AGG | 0.572483 | 5.3:-61953819 | None:intergenic |
TGCATTTCAGCGATAAACAC+GGG | 0.578429 | 5.3:+61952947 | MS.gene009570:CDS |
TCATAACTATACTCGGACTC+GGG | 0.578996 | 5.3:-61953138 | None:intergenic |
GATTTGGTAAAGTAACCTGT+TGG | 0.586732 | 5.3:-61953218 | None:intergenic |
CCTGAAAAGGGACAGTAACA+TGG | 0.591203 | 5.3:-61952889 | None:intergenic |
TCAGACGTTGAGCGGCCACT+GGG | 0.601307 | 5.3:-61953647 | None:intergenic |
AACGGCGGAAAAGGATGAGG+TGG | 0.604435 | 5.3:-61953816 | None:intergenic |
GTGCATTTCAGCGATAAACA+CGG | 0.612101 | 5.3:+61952946 | MS.gene009570:CDS |
AGCGTTCTCTTGGGACTAGA+CGG | 0.615006 | 5.3:+61953748 | MS.gene009570:CDS |
GTCTAGTCCCAAGAGAACGC+TGG | 0.620661 | 5.3:-61953746 | None:intergenic |
TTGCATTCACGTAACCTCCA+CGG | 0.623413 | 5.3:+61953299 | MS.gene009570:CDS |
TGAGGTGGTCATCTCGTCAA+CGG | 0.624853 | 5.3:-61953834 | None:intergenic |
GCAAAAGATCAGACGTTGAG+CGG | 0.628431 | 5.3:-61953655 | None:intergenic |
AAGAGAACGCTGGAGTGAGA+CGG | 0.637960 | 5.3:-61953736 | None:intergenic |
GCATTTCAGCGATAAACACG+GGG | 0.695447 | 5.3:+61952948 | MS.gene009570:CDS |
GGTGGTCATCTCGTCAACGG+CGG | 0.713045 | 5.3:-61953831 | None:intergenic |
GGATATAGGAAATACCGTGG+AGG | 0.730393 | 5.3:-61953313 | None:intergenic |
TGACAAGACTGAGATCCCAG+TGG | 0.762074 | 5.3:+61953632 | MS.gene009570:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAATATTATTACTCTTTT+AGG | + | chr5.3:61953078-61953097 | MS.gene009570:CDS | 10.0% |
!!! | ATTTTCTTTTATTGATTTAA+TGG | + | chr5.3:61953503-61953522 | MS.gene009570:intron | 10.0% |
!! | CAATATATCATAACTATACT+CGG | - | chr5.3:61953148-61953167 | None:intergenic | 20.0% |
!!! | CTCAAATCAAATTTTCTTAT+GGG | + | chr5.3:61952974-61952993 | MS.gene009570:CDS | 20.0% |
!!! | TATTGATTTAATGGAAATTG+TGG | + | chr5.3:61953512-61953531 | MS.gene009570:intron | 20.0% |
!!! | TCTCAAATCAAATTTTCTTA+TGG | + | chr5.3:61952973-61952992 | MS.gene009570:CDS | 20.0% |
! | AGAAACTCTGATAAAAGATT+TGG | - | chr5.3:61953237-61953256 | None:intergenic | 25.0% |
! | GCAAATTATCTCAAATTCAT+CGG | + | chr5.3:61953406-61953425 | MS.gene009570:intron | 25.0% |
! | TAAAATACCAAGATTTCACT+AGG | - | chr5.3:61953361-61953380 | None:intergenic | 25.0% |
AAATAGCCAAAGCAAAGAAT+AGG | - | chr5.3:61953337-61953356 | None:intergenic | 30.0% | |
ATAGATGTTGTAGTCGAAAA+GGG | - | chr5.3:61953706-61953725 | None:intergenic | 30.0% | |
CAAAGCAAAGAATAGGATAT+AGG | - | chr5.3:61953330-61953349 | None:intergenic | 30.0% | |
CAGATCCAAATCTTTGTAAA+GGG | + | chr5.3:61953537-61953556 | MS.gene009570:intron | 30.0% | |
CTATATCCTATTCTTTGCTT+TGG | + | chr5.3:61953328-61953347 | MS.gene009570:intron | 30.0% | |
GTCTGATTTCTTAACTCTAA+GGG | - | chr5.3:61953583-61953602 | None:intergenic | 30.0% | |
GTTCTTCAAGAGGAAAATTA+TGG | + | chr5.3:61953039-61953058 | MS.gene009570:CDS | 30.0% | |
TATAGATGTTGTAGTCGAAA+AGG | - | chr5.3:61953707-61953726 | None:intergenic | 30.0% | |
TGTCTGATTTCTTAACTCTA+AGG | - | chr5.3:61953584-61953603 | None:intergenic | 30.0% | |
! | ATTTTCCTCTTGAAGAACAA+TGG | - | chr5.3:61953037-61953056 | None:intergenic | 30.0% |
! | CTATTTTCCTAGTGAAATCT+TGG | + | chr5.3:61953351-61953370 | MS.gene009570:intron | 30.0% |
!! | GTTTTTCAAACGCCAAAAAA+CGG | + | chr5.3:61953428-61953447 | MS.gene009570:intron | 30.0% |
!!! | AAACACAAACAACCGTTTTT+TGG | - | chr5.3:61953443-61953462 | None:intergenic | 30.0% |
AACAAAGTCACAACCTGAAA+AGG | - | chr5.3:61952905-61952924 | None:intergenic | 35.0% | |
ACAAAGTCACAACCTGAAAA+GGG | - | chr5.3:61952904-61952923 | None:intergenic | 35.0% | |
AGAGGTTCAGAAGAATCAAA+TGG | - | chr5.3:61953267-61953286 | None:intergenic | 35.0% | |
ATAGGATATAGGAAATACCG+TGG | - | chr5.3:61953319-61953338 | None:intergenic | 35.0% | |
ATCATAACTATACTCGGACT+CGG | - | chr5.3:61953142-61953161 | None:intergenic | 35.0% | |
GCAGATCCAAATCTTTGTAA+AGG | + | chr5.3:61953536-61953555 | MS.gene009570:intron | 35.0% | |
GGTTTCATCATTAGACTTCA+AGG | - | chr5.3:61953016-61953035 | None:intergenic | 35.0% | |
TATTGCAAAGAATGTCCAAC+AGG | + | chr5.3:61953203-61953222 | MS.gene009570:CDS | 35.0% | |
TGAAACCATTGTTCTTCAAG+AGG | + | chr5.3:61953029-61953048 | MS.gene009570:CDS | 35.0% | |
! | GATTTGGTAAAGTAACCTGT+TGG | - | chr5.3:61953221-61953240 | None:intergenic | 35.0% |
! | TTTTGCGGTAGATACCTATA+TGG | + | chr5.3:61953672-61953691 | MS.gene009570:CDS | 35.0% |
!! | ATGCAAATTTCTAGCTTGAG+AGG | - | chr5.3:61953285-61953304 | None:intergenic | 35.0% |
AAAGGGTCAGGTTTCCATAT+AGG | - | chr5.3:61953689-61953708 | None:intergenic | 40.0% | |
AGACTTCAAGGAGACAATGA+AGG | - | chr5.3:61953004-61953023 | None:intergenic | 40.0% | |
ATCTTTGTAAAGGGCCTAGA+TGG | + | chr5.3:61953546-61953565 | MS.gene009570:CDS | 40.0% | |
CTAGGCCCTTTACAAAGATT+TGG | - | chr5.3:61953545-61953564 | None:intergenic | 40.0% | |
GGTGGACAATTGTCAAATGT+TGG | - | chr5.3:61953801-61953820 | None:intergenic | 40.0% | |
GTGCATTTCAGCGATAAACA+CGG | + | chr5.3:61952946-61952965 | MS.gene009570:CDS | 40.0% | |
TCATAACTATACTCGGACTC+GGG | - | chr5.3:61953141-61953160 | None:intergenic | 40.0% | |
TGCATTTCAGCGATAAACAC+GGG | + | chr5.3:61952947-61952966 | MS.gene009570:CDS | 40.0% | |
! | GCAGTCAATATTTGCTGCTT+TGG | + | chr5.3:61953105-61953124 | MS.gene009570:CDS | 40.0% |
ACTAATCGCCAATCGTCTTC+CGG | - | chr5.3:61953774-61953793 | None:intergenic | 45.0% | |
AGGGACAGTAACATGGCTTA+CGG | - | chr5.3:61952885-61952904 | None:intergenic | 45.0% | |
CCTGAAAAGGGACAGTAACA+TGG | - | chr5.3:61952892-61952911 | None:intergenic | 45.0% | |
GCAAAAGATCAGACGTTGAG+CGG | - | chr5.3:61953658-61953677 | None:intergenic | 45.0% | |
GCATTTCAGCGATAAACACG+GGG | + | chr5.3:61952948-61952967 | MS.gene009570:CDS | 45.0% | |
GGATATAGGAAATACCGTGG+AGG | - | chr5.3:61953316-61953335 | None:intergenic | 45.0% | |
GGGTCATACACTTTCCATCT+AGG | - | chr5.3:61953563-61953582 | None:intergenic | 45.0% | |
TGTTGTAGTCGAAAAGGGTC+AGG | - | chr5.3:61953701-61953720 | None:intergenic | 45.0% | |
TTGCATTCACGTAACCTCCA+CGG | + | chr5.3:61953299-61953318 | MS.gene009570:CDS | 45.0% | |
! | CCATGTTACTGTCCCTTTTC+AGG | + | chr5.3:61952889-61952908 | MS.gene009570:CDS | 45.0% |
! | GCTCAACGTCTGATCTTTTG+CGG | + | chr5.3:61953657-61953676 | MS.gene009570:CDS | 45.0% |
AAGAGAACGCTGGAGTGAGA+CGG | - | chr5.3:61953739-61953758 | None:intergenic | 50.0% | |
AGCGTTCTCTTGGGACTAGA+CGG | + | chr5.3:61953748-61953767 | MS.gene009570:CDS | 50.0% | |
TCTCACTCCAGCGTTCTCTT+GGG | + | chr5.3:61953739-61953758 | MS.gene009570:CDS | 50.0% | |
TGACAAGACTGAGATCCCAG+TGG | + | chr5.3:61953632-61953651 | MS.gene009570:CDS | 50.0% | |
AACGGCGGAAAAGGATGAGG+TGG | - | chr5.3:61953819-61953838 | None:intergenic | 55.0% | |
CATCTCGTCAACGGCGGAAA+AGG | - | chr5.3:61953828-61953847 | None:intergenic | 55.0% | |
GTCAACGGCGGAAAAGGATG+AGG | - | chr5.3:61953822-61953841 | None:intergenic | 55.0% | |
GTCTAGTCCCAAGAGAACGC+TGG | - | chr5.3:61953749-61953768 | None:intergenic | 55.0% | |
GTCTCACTCCAGCGTTCTCT+TGG | + | chr5.3:61953738-61953757 | MS.gene009570:CDS | 55.0% | |
TTCTCTTGGGACTAGACGGC+CGG | + | chr5.3:61953752-61953771 | MS.gene009570:CDS | 55.0% | |
ATCAGACGTTGAGCGGCCAC+TGG | - | chr5.3:61953651-61953670 | None:intergenic | 60.0% | |
CTAGACGGCCGGAAGACGAT+TGG | + | chr5.3:61953763-61953782 | MS.gene009570:CDS | 60.0% | |
TACTCGGACTCGGGTGTGTC+TGG | - | chr5.3:61953132-61953151 | None:intergenic | 60.0% | |
TCAGACGTTGAGCGGCCACT+GGG | - | chr5.3:61953650-61953669 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 61952862 | 61953848 | 61952862 | ID=MS.gene009570 |
chr5.3 | mRNA | 61952862 | 61953848 | 61952862 | ID=MS.gene009570.t1;Parent=MS.gene009570 |
chr5.3 | exon | 61952862 | 61953320 | 61952862 | ID=MS.gene009570.t1.exon1;Parent=MS.gene009570.t1 |
chr5.3 | CDS | 61952862 | 61953320 | 61952862 | ID=cds.MS.gene009570.t1;Parent=MS.gene009570.t1 |
chr5.3 | exon | 61953540 | 61953848 | 61953540 | ID=MS.gene009570.t1.exon2;Parent=MS.gene009570.t1 |
chr5.3 | CDS | 61953540 | 61953848 | 61953540 | ID=cds.MS.gene009570.t1;Parent=MS.gene009570.t1 |
Gene Sequence |
Protein sequence |