Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30350.t1 | XP_013444432.1 | 93.8 | 353 | 15 | 3 | 1 | 351 | 58 | 405 | 4.00E-101 | 378.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30350.t1 | Q9SLL2 | 52.1 | 211 | 95 | 3 | 136 | 345 | 159 | 364 | 3.9e-36 | 153.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30350.t1 | A0A072TM26 | 93.8 | 353 | 15 | 3 | 1 | 351 | 58 | 405 | 2.9e-101 | 378.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene30350 | 0.869197 | 3.71E-66 | -1.69E-46 |
MS.gene049159 | MS.gene30350 | 0.801004 | 1.10E-48 | -1.69E-46 |
MS.gene049254 | MS.gene30350 | 0.844938 | 5.54E-59 | -1.69E-46 |
MS.gene049350 | MS.gene30350 | 0.84306 | 1.77E-58 | -1.69E-46 |
MS.gene049368 | MS.gene30350 | 0.816605 | 5.07E-52 | -1.69E-46 |
MS.gene049404 | MS.gene30350 | 0.805882 | 1.08E-49 | -1.69E-46 |
MS.gene049711 | MS.gene30350 | 0.868268 | 7.41E-66 | -1.69E-46 |
MS.gene049825 | MS.gene30350 | 0.801192 | 1.01E-48 | -1.69E-46 |
MS.gene049850 | MS.gene30350 | 0.830894 | 2.27E-55 | -1.69E-46 |
MS.gene050137 | MS.gene30350 | 0.814205 | 1.73E-51 | -1.69E-46 |
MS.gene050156 | MS.gene30350 | 0.834341 | 3.17E-56 | -1.69E-46 |
MS.gene050559 | MS.gene30350 | 0.800096 | 1.69E-48 | -1.69E-46 |
MS.gene050561 | MS.gene30350 | 0.808748 | 2.66E-50 | -1.69E-46 |
MS.gene050657 | MS.gene30350 | 0.810834 | 9.46E-51 | -1.69E-46 |
MS.gene050807 | MS.gene30350 | 0.808256 | 3.39E-50 | -1.69E-46 |
MS.gene050826 | MS.gene30350 | 0.815194 | 1.05E-51 | -1.69E-46 |
MS.gene051201 | MS.gene30350 | 0.804468 | 2.13E-49 | -1.69E-46 |
MS.gene051247 | MS.gene30350 | 0.841554 | 4.43E-58 | -1.69E-46 |
MS.gene051279 | MS.gene30350 | 0.817886 | 2.61E-52 | -1.69E-46 |
MS.gene051700 | MS.gene30350 | 0.824805 | 6.61E-54 | -1.69E-46 |
MS.gene051719 | MS.gene30350 | 0.85732 | 1.77E-62 | -1.69E-46 |
MS.gene051720 | MS.gene30350 | 0.856374 | 3.36E-62 | -1.69E-46 |
MS.gene051744 | MS.gene30350 | 0.845535 | 3.82E-59 | -1.69E-46 |
MS.gene051800 | MS.gene30350 | 0.819991 | 8.68E-53 | -1.69E-46 |
MS.gene052000 | MS.gene30350 | 0.813208 | 2.88E-51 | -1.69E-46 |
MS.gene052042 | MS.gene30350 | 0.80003 | 1.74E-48 | -1.69E-46 |
MS.gene052463 | MS.gene30350 | 0.838562 | 2.67E-57 | -1.69E-46 |
MS.gene052516 | MS.gene30350 | 0.866075 | 3.71E-65 | -1.69E-46 |
MS.gene052519 | MS.gene30350 | 0.823535 | 1.31E-53 | -1.69E-46 |
MS.gene052534 | MS.gene30350 | 0.823023 | 1.73E-53 | -1.69E-46 |
MS.gene052582 | MS.gene30350 | 0.816688 | 4.86E-52 | -1.69E-46 |
MS.gene052584 | MS.gene30350 | 0.827531 | 1.49E-54 | -1.69E-46 |
MS.gene052611 | MS.gene30350 | 0.81713 | 3.87E-52 | -1.69E-46 |
MS.gene052673 | MS.gene30350 | -0.8058 | 1.12E-49 | -1.69E-46 |
MS.gene052773 | MS.gene30350 | 0.834852 | 2.36E-56 | -1.69E-46 |
MS.gene052863 | MS.gene30350 | 0.823965 | 1.04E-53 | -1.69E-46 |
MS.gene052896 | MS.gene30350 | 0.804525 | 2.07E-49 | -1.69E-46 |
MS.gene053079 | MS.gene30350 | 0.812124 | 4.97E-51 | -1.69E-46 |
MS.gene053144 | MS.gene30350 | 0.830227 | 3.31E-55 | -1.69E-46 |
MS.gene053164 | MS.gene30350 | 0.805492 | 1.30E-49 | -1.69E-46 |
MS.gene053226 | MS.gene30350 | 0.854996 | 8.48E-62 | -1.69E-46 |
MS.gene054139 | MS.gene30350 | 0.801641 | 8.18E-49 | -1.69E-46 |
MS.gene05422 | MS.gene30350 | 0.801925 | 7.15E-49 | -1.69E-46 |
MS.gene054236 | MS.gene30350 | 0.807176 | 5.74E-50 | -1.69E-46 |
MS.gene05423 | MS.gene30350 | 0.815829 | 7.57E-52 | -1.69E-46 |
MS.gene054467 | MS.gene30350 | 0.811013 | 8.66E-51 | -1.69E-46 |
MS.gene054468 | MS.gene30350 | 0.81868 | 1.73E-52 | -1.69E-46 |
MS.gene054576 | MS.gene30350 | 0.820286 | 7.43E-53 | -1.69E-46 |
MS.gene054584 | MS.gene30350 | 0.818881 | 1.55E-52 | -1.69E-46 |
MS.gene05458 | MS.gene30350 | 0.842082 | 3.21E-58 | -1.69E-46 |
MS.gene054651 | MS.gene30350 | 0.847728 | 9.62E-60 | -1.69E-46 |
MS.gene05468 | MS.gene30350 | 0.823212 | 1.56E-53 | -1.69E-46 |
MS.gene054775 | MS.gene30350 | 0.845478 | 3.96E-59 | -1.69E-46 |
MS.gene054991 | MS.gene30350 | 0.82789 | 1.22E-54 | -1.69E-46 |
MS.gene055083 | MS.gene30350 | 0.807012 | 6.22E-50 | -1.69E-46 |
MS.gene055144 | MS.gene30350 | 0.82552 | 4.48E-54 | -1.69E-46 |
MS.gene055227 | MS.gene30350 | 0.825696 | 4.07E-54 | -1.69E-46 |
MS.gene055228 | MS.gene30350 | 0.802313 | 5.95E-49 | -1.69E-46 |
MS.gene055313 | MS.gene30350 | 0.804011 | 2.65E-49 | -1.69E-46 |
MS.gene055465 | MS.gene30350 | 0.827815 | 1.27E-54 | -1.69E-46 |
MS.gene055466 | MS.gene30350 | 0.830659 | 2.59E-55 | -1.69E-46 |
MS.gene055468 | MS.gene30350 | 0.815365 | 9.60E-52 | -1.69E-46 |
MS.gene055512 | MS.gene30350 | 0.801592 | 8.37E-49 | -1.69E-46 |
MS.gene055513 | MS.gene30350 | 0.823273 | 1.51E-53 | -1.69E-46 |
MS.gene055586 | MS.gene30350 | 0.803505 | 3.38E-49 | -1.69E-46 |
MS.gene055818 | MS.gene30350 | 0.826449 | 2.70E-54 | -1.69E-46 |
MS.gene055926 | MS.gene30350 | 0.849828 | 2.52E-60 | -1.69E-46 |
MS.gene056005 | MS.gene30350 | 0.813705 | 2.24E-51 | -1.69E-46 |
MS.gene05604 | MS.gene30350 | 0.843784 | 1.13E-58 | -1.69E-46 |
MS.gene056050 | MS.gene30350 | 0.833798 | 4.34E-56 | -1.69E-46 |
MS.gene056308 | MS.gene30350 | 0.826587 | 2.50E-54 | -1.69E-46 |
MS.gene056366 | MS.gene30350 | 0.823721 | 1.19E-53 | -1.69E-46 |
MS.gene056553 | MS.gene30350 | 0.814491 | 1.50E-51 | -1.69E-46 |
MS.gene056595 | MS.gene30350 | 0.837282 | 5.70E-57 | -1.69E-46 |
MS.gene05686 | MS.gene30350 | 0.824724 | 6.91E-54 | -1.69E-46 |
MS.gene057026 | MS.gene30350 | 0.824661 | 7.15E-54 | -1.69E-46 |
MS.gene057034 | MS.gene30350 | 0.800841 | 1.19E-48 | -1.69E-46 |
MS.gene057132 | MS.gene30350 | 0.813008 | 3.18E-51 | -1.69E-46 |
MS.gene057208 | MS.gene30350 | 0.811257 | 7.66E-51 | -1.69E-46 |
MS.gene057444 | MS.gene30350 | 0.814195 | 1.74E-51 | -1.69E-46 |
MS.gene057598 | MS.gene30350 | 0.801114 | 1.05E-48 | -1.69E-46 |
MS.gene057611 | MS.gene30350 | 0.803629 | 3.18E-49 | -1.69E-46 |
MS.gene057915 | MS.gene30350 | 0.824464 | 7.96E-54 | -1.69E-46 |
MS.gene058010 | MS.gene30350 | 0.807863 | 4.11E-50 | -1.69E-46 |
MS.gene058339 | MS.gene30350 | 0.820658 | 6.11E-53 | -1.69E-46 |
MS.gene05847 | MS.gene30350 | 0.802742 | 4.86E-49 | -1.69E-46 |
MS.gene058625 | MS.gene30350 | 0.856815 | 2.49E-62 | -1.69E-46 |
MS.gene058829 | MS.gene30350 | 0.800085 | 1.70E-48 | -1.69E-46 |
MS.gene058979 | MS.gene30350 | 0.810551 | 1.09E-50 | -1.69E-46 |
MS.gene05897 | MS.gene30350 | 0.81799 | 2.47E-52 | -1.69E-46 |
MS.gene059272 | MS.gene30350 | 0.817333 | 3.48E-52 | -1.69E-46 |
MS.gene059438 | MS.gene30350 | 0.801395 | 9.19E-49 | -1.69E-46 |
MS.gene059439 | MS.gene30350 | 0.837134 | 6.22E-57 | -1.69E-46 |
MS.gene059570 | MS.gene30350 | 0.829619 | 4.65E-55 | -1.69E-46 |
MS.gene059625 | MS.gene30350 | 0.8272 | 1.78E-54 | -1.69E-46 |
MS.gene059725 | MS.gene30350 | 0.817038 | 4.06E-52 | -1.69E-46 |
MS.gene059842 | MS.gene30350 | 0.800043 | 1.73E-48 | -1.69E-46 |
MS.gene059965 | MS.gene30350 | 0.801664 | 8.09E-49 | -1.69E-46 |
MS.gene060312 | MS.gene30350 | 0.807019 | 6.20E-50 | -1.69E-46 |
MS.gene060322 | MS.gene30350 | 0.829803 | 4.20E-55 | -1.69E-46 |
MS.gene060519 | MS.gene30350 | 0.803823 | 2.90E-49 | -1.69E-46 |
MS.gene06052 | MS.gene30350 | 0.819469 | 1.14E-52 | -1.69E-46 |
MS.gene060777 | MS.gene30350 | 0.809128 | 2.21E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30350.t1 | MTR_8g019660 | 95.184 | 353 | 10 | 3 | 1 | 351 | 58 | 405 | 0.0 | 679 |
MS.gene30350.t1 | MTR_3g104880 | 48.069 | 233 | 92 | 9 | 121 | 345 | 160 | 371 | 7.33e-39 | 142 |
MS.gene30350.t1 | MTR_4g125620 | 38.028 | 355 | 132 | 15 | 10 | 351 | 65 | 344 | 2.16e-28 | 113 |
MS.gene30350.t1 | MTR_1g015275 | 39.161 | 286 | 116 | 8 | 67 | 337 | 123 | 365 | 3.99e-22 | 96.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30350.t1 | AT3G13980 | 50.896 | 279 | 88 | 10 | 78 | 351 | 123 | 357 | 1.28e-63 | 206 |
MS.gene30350.t1 | AT1G54200 | 47.350 | 283 | 115 | 9 | 71 | 346 | 110 | 365 | 8.04e-54 | 181 |
MS.gene30350.t1 | AT3G42800 | 31.707 | 287 | 153 | 15 | 70 | 351 | 93 | 341 | 3.24e-20 | 90.5 |
Find 41 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGGATAATTTATCAGTAAT+TGG | 0.114503 | 8.1:-79258164 | MS.gene30350:CDS |
TTCAATCCCAATAGAGTTAT+TGG | 0.119420 | 8.1:-79258095 | MS.gene30350:CDS |
ATGTGATGCAAGAGAGTTTA+AGG | 0.174902 | 8.1:-79258319 | MS.gene30350:CDS |
TCAGAAACACTTGTTCTAAT+TGG | 0.223959 | 8.1:+79258866 | None:intergenic |
ACCATTTCCAATAACTCTAT+TGG | 0.241032 | 8.1:+79258088 | None:intergenic |
AACATTGATTCATTTCAATA+TGG | 0.291124 | 8.1:-79258836 | MS.gene30350:CDS |
AACTACTACAAATTCTGTTT+TGG | 0.296788 | 8.1:-79258573 | MS.gene30350:CDS |
GAACAGAATGGTTATGGTTA+TGG | 0.298193 | 8.1:+79258789 | None:intergenic |
TCTGATTCAGAATCATTCTA+TGG | 0.300272 | 8.1:-79258905 | MS.gene30350:CDS |
ACACTTGTTCTAATTGGTTT+TGG | 0.300946 | 8.1:+79258872 | None:intergenic |
CCCAATAGAGTTATTGGAAA+TGG | 0.315105 | 8.1:-79258089 | MS.gene30350:CDS |
TATGGTTATGGTTATAGTTA+TGG | 0.322181 | 8.1:+79258801 | None:intergenic |
CCATTTCCAATAACTCTATT+GGG | 0.327955 | 8.1:+79258089 | None:intergenic |
AAGCAAGAAAGGTGGAGAAT+TGG | 0.331562 | 8.1:-79259063 | MS.gene30350:CDS |
AAATGAGTAGTTTCATAAAC+TGG | 0.342032 | 8.1:+79258116 | None:intergenic |
TGGATAATTTATCAGTAATT+GGG | 0.347307 | 8.1:-79258163 | MS.gene30350:CDS |
GAGTTTGAACAGAATGGTTA+TGG | 0.352789 | 8.1:+79258783 | None:intergenic |
TATTGAAATGAATCAATGTT+TGG | 0.355365 | 8.1:+79258839 | None:intergenic |
TCATCAACAATTACACTAAC+AGG | 0.363408 | 8.1:+79258437 | None:intergenic |
ATACAAAATTCTCAAAGCTT+TGG | 0.378204 | 8.1:+79258721 | None:intergenic |
AGAGTAGTAGTGAAGAATTA+AGG | 0.394514 | 8.1:-79258346 | MS.gene30350:CDS |
GAATTTGCATGAAGGTGAAA+AGG | 0.410666 | 8.1:-79258390 | MS.gene30350:CDS |
TAGTTCTGATTTGTTTGAAT+TGG | 0.413467 | 8.1:-79258183 | MS.gene30350:CDS |
TATCAGTAATTGGGATTGAA+AGG | 0.444002 | 8.1:-79258154 | MS.gene30350:CDS |
TTAGCACCTGATCTTGATGA+AGG | 0.453605 | 8.1:+79258479 | None:intergenic |
AAAACTCCTTCATCAAGATC+AGG | 0.481984 | 8.1:-79258485 | MS.gene30350:CDS |
TCTTCAGAATCAAGTTCAGC+TGG | 0.492878 | 8.1:-79258941 | MS.gene30350:CDS |
AATTTGCATGAAGGTGAAAA+GGG | 0.494062 | 8.1:-79258389 | MS.gene30350:CDS |
AAGGGTTCTTCAATCTATGA+TGG | 0.496294 | 8.1:-79258371 | MS.gene30350:CDS |
AAACTTCAGAAAAGCAAGAA+AGG | 0.514735 | 8.1:-79259074 | MS.gene30350:CDS |
TGCAAATTCTTGTGTCCACA+AGG | 0.543709 | 8.1:+79258404 | None:intergenic |
TGTGATGCAAGAGAGTTTAA+GGG | 0.547284 | 8.1:-79258318 | MS.gene30350:CDS |
GATGAAGATGAAGATGATGA+TGG | 0.547702 | 8.1:-79258218 | MS.gene30350:CDS |
TGGAATGAGAAAGTTGTGAA+TGG | 0.552681 | 8.1:-79259043 | MS.gene30350:CDS |
AGAAGATGAACTTGAATGCA+TGG | 0.580776 | 8.1:+79258961 | None:intergenic |
TCAGAATCAAGTTCAGCTGG+TGG | 0.600576 | 8.1:-79258938 | MS.gene30350:CDS |
CTTCAGAAAAGCAAGAAAGG+TGG | 0.635352 | 8.1:-79259071 | MS.gene30350:CDS |
ACAAAGCAACCTATTTCACC+TGG | 0.653006 | 8.1:-79258683 | MS.gene30350:CDS |
GATGAAGATTGTAGACCTTG+TGG | 0.657954 | 8.1:-79258419 | MS.gene30350:CDS |
GGACACAAGAATTTGCATGA+AGG | 0.670978 | 8.1:-79258398 | MS.gene30350:CDS |
CAGGTGCTAAAAGATCAGTG+AGG | 0.837686 | 8.1:-79258466 | MS.gene30350:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTGAAATGAATCAATGTT+TGG | + | chr8.1:79258349-79258368 | None:intergenic | 20.0% |
!! | TGGATAATTTATCAGTAATT+GGG | - | chr8.1:79259022-79259041 | MS.gene30350:CDS | 20.0% |
!! | TTGGATAATTTATCAGTAAT+TGG | - | chr8.1:79259021-79259040 | MS.gene30350:CDS | 20.0% |
!!! | AACATTGATTCATTTCAATA+TGG | - | chr8.1:79258349-79258368 | MS.gene30350:CDS | 20.0% |
!!! | TGATGGTATTTTTGATTTTT+TGG | + | chr8.1:79258578-79258597 | None:intergenic | 20.0% |
! | AAATGAGTAGTTTCATAAAC+TGG | + | chr8.1:79259072-79259091 | None:intergenic | 25.0% |
! | ATACAAAATTCTCAAAGCTT+TGG | + | chr8.1:79258467-79258486 | None:intergenic | 25.0% |
! | CAAAAACCAAAAAATGAGAA+TGG | - | chr8.1:79258424-79258443 | MS.gene30350:CDS | 25.0% |
! | TATGGTTATGGTTATAGTTA+TGG | + | chr8.1:79258387-79258406 | None:intergenic | 25.0% |
!! | AACTACTACAAATTCTGTTT+TGG | - | chr8.1:79258612-79258631 | MS.gene30350:CDS | 25.0% |
!!! | AAAGCTTTGAGAATTTTGTA+TGG | - | chr8.1:79258466-79258485 | MS.gene30350:CDS | 25.0% |
!!! | AATTCACTTTTCAATTCTAG+TGG | - | chr8.1:79258547-79258566 | MS.gene30350:CDS | 25.0% |
!!! | TAGTTCTGATTTGTTTGAAT+TGG | - | chr8.1:79259002-79259021 | MS.gene30350:CDS | 25.0% |
AAACTTCAGAAAAGCAAGAA+AGG | - | chr8.1:79258111-79258130 | MS.gene30350:CDS | 30.0% | |
AATTTGCATGAAGGTGAAAA+GGG | - | chr8.1:79258796-79258815 | MS.gene30350:CDS | 30.0% | |
ACCATTTCCAATAACTCTAT+TGG | + | chr8.1:79259100-79259119 | None:intergenic | 30.0% | |
AGAGTAGTAGTGAAGAATTA+AGG | - | chr8.1:79258839-79258858 | MS.gene30350:CDS | 30.0% | |
CCAAAAAATGAGAATGGTTT+AGG | - | chr8.1:79258430-79258449 | MS.gene30350:CDS | 30.0% | |
CCATTTCCAATAACTCTATT+GGG | + | chr8.1:79259099-79259118 | None:intergenic | 30.0% | |
TATCAGTAATTGGGATTGAA+AGG | - | chr8.1:79259031-79259050 | MS.gene30350:CDS | 30.0% | |
TCAGAAACACTTGTTCTAAT+TGG | + | chr8.1:79258322-79258341 | None:intergenic | 30.0% | |
TCATCAACAATTACACTAAC+AGG | + | chr8.1:79258751-79258770 | None:intergenic | 30.0% | |
TCTGATTCAGAATCATTCTA+TGG | - | chr8.1:79258280-79258299 | MS.gene30350:CDS | 30.0% | |
TTCAATCCCAATAGAGTTAT+TGG | - | chr8.1:79259090-79259109 | MS.gene30350:CDS | 30.0% | |
!! | ACACTTGTTCTAATTGGTTT+TGG | + | chr8.1:79258316-79258335 | None:intergenic | 30.0% |
!!! | CCTAAACCATTCTCATTTTT+TGG | + | chr8.1:79258433-79258452 | None:intergenic | 30.0% |
!!! | GTTTTTGAGTTTGAACAGAA+TGG | + | chr8.1:79258411-79258430 | None:intergenic | 30.0% |
!!! | TTTCTTGCTTTTCTGAAGTT+TGG | + | chr8.1:79258112-79258131 | None:intergenic | 30.0% |
AAAACTCCTTCATCAAGATC+AGG | - | chr8.1:79258700-79258719 | MS.gene30350:CDS | 35.0% | |
AAGGGTTCTTCAATCTATGA+TGG | - | chr8.1:79258814-79258833 | MS.gene30350:CDS | 35.0% | |
AGAAGATGAACTTGAATGCA+TGG | + | chr8.1:79258227-79258246 | None:intergenic | 35.0% | |
ATGTGATGCAAGAGAGTTTA+AGG | - | chr8.1:79258866-79258885 | MS.gene30350:CDS | 35.0% | |
CCCAATAGAGTTATTGGAAA+TGG | - | chr8.1:79259096-79259115 | MS.gene30350:CDS | 35.0% | |
GAACAGAATGGTTATGGTTA+TGG | + | chr8.1:79258399-79258418 | None:intergenic | 35.0% | |
GAATTTGCATGAAGGTGAAA+AGG | - | chr8.1:79258795-79258814 | MS.gene30350:CDS | 35.0% | |
GAGTTTGAACAGAATGGTTA+TGG | + | chr8.1:79258405-79258424 | None:intergenic | 35.0% | |
GATGAAGATGAAGATGATGA+TGG | - | chr8.1:79258967-79258986 | MS.gene30350:CDS | 35.0% | |
TGGAATGAGAAAGTTGTGAA+TGG | - | chr8.1:79258142-79258161 | MS.gene30350:CDS | 35.0% | |
TGTGATGCAAGAGAGTTTAA+GGG | - | chr8.1:79258867-79258886 | MS.gene30350:CDS | 35.0% | |
! | ATTTTTGCACCAGGTGAAAT+AGG | + | chr8.1:79258514-79258533 | None:intergenic | 35.0% |
!! | CATCAGTGTCTTCTTTTTCA+AGG | - | chr8.1:79258665-79258684 | MS.gene30350:CDS | 35.0% |
!! | GTTTTTGTAGCTGTTGATGA+TGG | + | chr8.1:79258595-79258614 | None:intergenic | 35.0% |
AAGCAAGAAAGGTGGAGAAT+TGG | - | chr8.1:79258122-79258141 | MS.gene30350:CDS | 40.0% | |
ACAAAGCAACCTATTTCACC+TGG | - | chr8.1:79258502-79258521 | MS.gene30350:CDS | 40.0% | |
CTTCAGAAAAGCAAGAAAGG+TGG | - | chr8.1:79258114-79258133 | MS.gene30350:CDS | 40.0% | |
GATGAAGATTGTAGACCTTG+TGG | - | chr8.1:79258766-79258785 | MS.gene30350:CDS | 40.0% | |
GGACACAAGAATTTGCATGA+AGG | - | chr8.1:79258787-79258806 | MS.gene30350:CDS | 40.0% | |
TCTTCAGAATCAAGTTCAGC+TGG | - | chr8.1:79258244-79258263 | MS.gene30350:CDS | 40.0% | |
TGCAAATTCTTGTGTCCACA+AGG | + | chr8.1:79258784-79258803 | None:intergenic | 40.0% | |
TTAGCACCTGATCTTGATGA+AGG | + | chr8.1:79258709-79258728 | None:intergenic | 40.0% | |
! | AAGCTAGCAATTTTTGCACC+AGG | + | chr8.1:79258523-79258542 | None:intergenic | 40.0% |
CAGGTGCTAAAAGATCAGTG+AGG | - | chr8.1:79258719-79258738 | MS.gene30350:CDS | 45.0% | |
TCAGAATCAAGTTCAGCTGG+TGG | - | chr8.1:79258247-79258266 | MS.gene30350:CDS | 45.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 79258076 | 79259131 | 79258076 | ID=MS.gene30350 |
chr8.1 | mRNA | 79258076 | 79259131 | 79258076 | ID=MS.gene30350.t1;Parent=MS.gene30350 |
chr8.1 | exon | 79258076 | 79259131 | 79258076 | ID=MS.gene30350.t1.exon1;Parent=MS.gene30350.t1 |
chr8.1 | CDS | 79258076 | 79259131 | 79258076 | ID=cds.MS.gene30350.t1;Parent=MS.gene30350.t1 |
Gene Sequence |
Protein sequence |