Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30766.t1 | XP_003601110.1 | 98.2 | 166 | 3 | 0 | 1 | 166 | 1 | 166 | 4.70E-84 | 320.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30766.t1 | P42732 | 70.8 | 168 | 44 | 2 | 1 | 165 | 1 | 166 | 3.1e-60 | 232.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30766.t1 | G7J3M7 | 98.2 | 166 | 3 | 0 | 1 | 166 | 1 | 166 | 3.4e-84 | 320.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene30766 | 0.826257 | 3.00E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene30766 | 0.818767 | 1.65E-52 | -1.69E-46 |
| MS.gene049389 | MS.gene30766 | 0.813486 | 2.50E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene30766 | 0.817683 | 2.90E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene30766 | 0.833997 | 3.87E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene30766 | 0.864751 | 9.71E-65 | -1.69E-46 |
| MS.gene049661 | MS.gene30766 | 0.825646 | 4.19E-54 | -1.69E-46 |
| MS.gene049662 | MS.gene30766 | 0.820977 | 5.16E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene30766 | 0.846863 | 1.66E-59 | -1.69E-46 |
| MS.gene049760 | MS.gene30766 | 0.811998 | 5.29E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene30766 | 0.81378 | 2.15E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene30766 | 0.848898 | 4.57E-60 | -1.69E-46 |
| MS.gene050128 | MS.gene30766 | 0.827001 | 1.99E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene30766 | 0.84106 | 5.97E-58 | -1.69E-46 |
| MS.gene050397 | MS.gene30766 | 0.824098 | 9.70E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene30766 | 0.849011 | 4.25E-60 | -1.69E-46 |
| MS.gene050529 | MS.gene30766 | 0.821002 | 5.09E-53 | -1.69E-46 |
| MS.gene05053 | MS.gene30766 | 0.813253 | 2.81E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene30766 | 0.879861 | 8.82E-70 | -1.69E-46 |
| MS.gene050770 | MS.gene30766 | 0.883276 | 5.14E-71 | -1.69E-46 |
| MS.gene05101 | MS.gene30766 | 0.851389 | 9.16E-61 | -1.69E-46 |
| MS.gene051228 | MS.gene30766 | 0.872759 | 2.48E-67 | -1.69E-46 |
| MS.gene051471 | MS.gene30766 | 0.855617 | 5.59E-62 | -1.69E-46 |
| MS.gene051666 | MS.gene30766 | 0.809931 | 1.48E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene30766 | 0.827775 | 1.30E-54 | -1.69E-46 |
| MS.gene051877 | MS.gene30766 | 0.810688 | 1.02E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene30766 | 0.859423 | 4.18E-63 | -1.69E-46 |
| MS.gene052178 | MS.gene30766 | 0.839847 | 1.24E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene30766 | 0.819308 | 1.24E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene30766 | 0.806651 | 7.42E-50 | -1.69E-46 |
| MS.gene052290 | MS.gene30766 | 0.887131 | 1.87E-72 | -1.69E-46 |
| MS.gene052293 | MS.gene30766 | 0.817254 | 3.63E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene30766 | 0.848383 | 6.35E-60 | -1.69E-46 |
| MS.gene052322 | MS.gene30766 | 0.819604 | 1.06E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene30766 | 0.866104 | 3.64E-65 | -1.69E-46 |
| MS.gene052340 | MS.gene30766 | 0.819183 | 1.33E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene30766 | 0.85597 | 4.41E-62 | -1.69E-46 |
| MS.gene052421 | MS.gene30766 | 0.804625 | 1.97E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene30766 | 0.80706 | 6.08E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene30766 | 0.804254 | 2.36E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene30766 | 0.827935 | 1.19E-54 | -1.69E-46 |
| MS.gene053103 | MS.gene30766 | 0.848749 | 5.03E-60 | -1.69E-46 |
| MS.gene053104 | MS.gene30766 | 0.834767 | 2.48E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene30766 | 0.850375 | 1.77E-60 | -1.69E-46 |
| MS.gene053322 | MS.gene30766 | 0.880002 | 7.86E-70 | -1.69E-46 |
| MS.gene053384 | MS.gene30766 | 0.866491 | 2.74E-65 | -1.69E-46 |
| MS.gene053449 | MS.gene30766 | 0.811924 | 5.49E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene30766 | 0.828864 | 7.09E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene30766 | 0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene30766 | 0.849043 | 4.17E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene30766 | 0.867969 | 9.25E-66 | -1.69E-46 |
| MS.gene05455 | MS.gene30766 | 0.815483 | 9.04E-52 | -1.69E-46 |
| MS.gene054802 | MS.gene30766 | 0.852708 | 3.87E-61 | -1.69E-46 |
| MS.gene054803 | MS.gene30766 | 0.852352 | 4.88E-61 | -1.69E-46 |
| MS.gene054804 | MS.gene30766 | 0.854826 | 9.50E-62 | -1.69E-46 |
| MS.gene054955 | MS.gene30766 | 0.833323 | 5.70E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene30766 | 0.826548 | 2.55E-54 | -1.69E-46 |
| MS.gene055212 | MS.gene30766 | 0.802273 | 6.07E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene30766 | 0.874016 | 9.38E-68 | -1.69E-46 |
| MS.gene055277 | MS.gene30766 | 0.875498 | 2.94E-68 | -1.69E-46 |
| MS.gene055390 | MS.gene30766 | 0.835815 | 1.35E-56 | -1.69E-46 |
| MS.gene055397 | MS.gene30766 | 0.852132 | 5.64E-61 | -1.69E-46 |
| MS.gene055412 | MS.gene30766 | 0.828809 | 7.31E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene30766 | 0.854038 | 1.61E-61 | -1.69E-46 |
| MS.gene055428 | MS.gene30766 | 0.823261 | 1.52E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene30766 | 0.840304 | 9.42E-58 | -1.69E-46 |
| MS.gene055636 | MS.gene30766 | 0.811331 | 7.38E-51 | -1.69E-46 |
| MS.gene055896 | MS.gene30766 | 0.83909 | 1.95E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene30766 | 0.856718 | 2.66E-62 | -1.69E-46 |
| MS.gene056314 | MS.gene30766 | 0.811673 | 6.22E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene30766 | 0.804057 | 2.59E-49 | -1.69E-46 |
| MS.gene056410 | MS.gene30766 | 0.863285 | 2.78E-64 | -1.69E-46 |
| MS.gene056609 | MS.gene30766 | 0.880857 | 3.88E-70 | -1.69E-46 |
| MS.gene056611 | MS.gene30766 | 0.804758 | 1.85E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene30766 | 0.827564 | 1.46E-54 | -1.69E-46 |
| MS.gene056719 | MS.gene30766 | 0.809631 | 1.72E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene30766 | 0.802045 | 6.76E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene30766 | 0.833818 | 4.29E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene30766 | 0.831613 | 1.51E-55 | -1.69E-46 |
| MS.gene057123 | MS.gene30766 | 0.855449 | 6.26E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene30766 | 0.860512 | 1.96E-63 | -1.69E-46 |
| MS.gene057146 | MS.gene30766 | 0.828538 | 8.50E-55 | -1.69E-46 |
| MS.gene057295 | MS.gene30766 | 0.836983 | 6.80E-57 | -1.69E-46 |
| MS.gene05733 | MS.gene30766 | 0.809932 | 1.48E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene30766 | 0.821193 | 4.60E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene30766 | 0.804712 | 1.89E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene30766 | 0.808389 | 3.17E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene30766 | 0.827997 | 1.15E-54 | -1.69E-46 |
| MS.gene058006 | MS.gene30766 | 0.802322 | 5.93E-49 | -1.69E-46 |
| MS.gene058082 | MS.gene30766 | 0.842338 | 2.75E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene30766 | 0.835238 | 1.88E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene30766 | 0.85786 | 1.22E-62 | -1.69E-46 |
| MS.gene058323 | MS.gene30766 | 0.826552 | 2.55E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene30766 | 0.874581 | 6.04E-68 | -1.69E-46 |
| MS.gene058787 | MS.gene30766 | 0.802873 | 4.56E-49 | -1.69E-46 |
| MS.gene058903 | MS.gene30766 | 0.813258 | 2.80E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene30766 | 0.823188 | 1.58E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene30766 | 0.831128 | 1.99E-55 | -1.69E-46 |
| MS.gene059326 | MS.gene30766 | 0.861496 | 9.85E-64 | -1.69E-46 |
| MS.gene059342 | MS.gene30766 | 0.811822 | 5.78E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene30766 | 0.81365 | 2.30E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene30766 | 0.862866 | 3.74E-64 | -1.69E-46 |
| MS.gene059597 | MS.gene30766 | 0.849818 | 2.53E-60 | -1.69E-46 |
| MS.gene05959 | MS.gene30766 | 0.856903 | 2.35E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene30766 | 0.869246 | 3.58E-66 | -1.69E-46 |
| MS.gene059688 | MS.gene30766 | 0.840236 | 9.82E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene30766 | 0.849422 | 3.27E-60 | -1.69E-46 |
| MS.gene059695 | MS.gene30766 | 0.840476 | 8.50E-58 | -1.69E-46 |
| MS.gene059708 | MS.gene30766 | 0.837872 | 4.02E-57 | -1.69E-46 |
| MS.gene059711 | MS.gene30766 | 0.830988 | 2.15E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene30766 | 0.811027 | 8.60E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene30766 | 0.865515 | 5.58E-65 | -1.69E-46 |
| MS.gene059960 | MS.gene30766 | 0.875741 | 2.43E-68 | -1.69E-46 |
| MS.gene059974 | MS.gene30766 | 0.816367 | 5.74E-52 | -1.69E-46 |
| MS.gene060005 | MS.gene30766 | 0.825915 | 3.61E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene30766 | 0.81271 | 3.70E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene30766 | 0.861367 | 1.08E-63 | -1.69E-46 |
| MS.gene060818 | MS.gene30766 | 0.876546 | 1.28E-68 | -1.69E-46 |
| MS.gene060837 | MS.gene30766 | 0.804219 | 2.40E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene30766 | 0.803198 | 3.91E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene30766 | 0.847751 | 9.48E-60 | -1.69E-46 |
| MS.gene061049 | MS.gene30766 | 0.8251 | 5.63E-54 | -1.69E-46 |
| MS.gene061051 | MS.gene30766 | -0.845265 | 4.52E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene30766 | 0.877191 | 7.66E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30766.t1 | MTR_3g073140 | 98.193 | 166 | 3 | 0 | 1 | 166 | 1 | 166 | 1.69e-118 | 332 |
| MS.gene30766.t1 | MTR_4g081120 | 47.727 | 132 | 69 | 0 | 21 | 152 | 34 | 165 | 7.97e-35 | 120 |
| MS.gene30766.t1 | MTR_4g081120 | 53.000 | 100 | 47 | 0 | 53 | 152 | 46 | 145 | 3.27e-34 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30766.t1 | AT5G14320 | 70.513 | 156 | 41 | 2 | 1 | 153 | 1 | 154 | 2.62e-76 | 225 |
| MS.gene30766.t1 | AT5G14320 | 62.069 | 116 | 39 | 2 | 1 | 113 | 1 | 114 | 5.03e-44 | 142 |
| MS.gene30766.t1 | AT1G77750 | 48.387 | 124 | 64 | 0 | 42 | 165 | 27 | 150 | 2.09e-37 | 126 |
Find 40 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGTCCTGCAATTATTCT+TGG | 0.215118 | 3.1:+59960102 | None:intergenic |
| AATTCAATTCTCTTGTTGTT+TGG | 0.264258 | 3.1:+59960471 | None:intergenic |
| CAGAGGAATAAGGCATATTC+AGG | 0.285946 | 3.1:-59960149 | MS.gene30766:CDS |
| AATTGTGTTACCTTTGGCTT+TGG | 0.351843 | 3.1:+59960600 | None:intergenic |
| GGCTTTGGAGTGTTGAGAAC+TGG | 0.358340 | 3.1:+59960615 | None:intergenic |
| GGTAAGAAGGTTACTGTTGC+TGG | 0.372364 | 3.1:-59960076 | MS.gene30766:CDS |
| AAGAAGAGCTTATTAGTCTC+AGG | 0.387619 | 3.1:-59960353 | MS.gene30766:CDS |
| TTCAGTGTTACAGAGGAATA+AGG | 0.388901 | 3.1:-59960159 | MS.gene30766:CDS |
| ATACATGACTGAAGGAGATT+TGG | 0.390225 | 3.1:-59960316 | MS.gene30766:intron |
| GGAGAAGTGACCATGGCCTT+TGG | 0.397280 | 3.1:+59960653 | None:intergenic |
| GATTCTAACTGATATCAGTA+TGG | 0.462554 | 3.1:-59960403 | MS.gene30766:CDS |
| TTGCAGTACATTCATGGAGT+TGG | 0.465952 | 3.1:-59960444 | MS.gene30766:CDS |
| TATGGAGAATAAAGTTACTA+AGG | 0.474154 | 3.1:-59960385 | MS.gene30766:CDS |
| CAGGACATTGAAGGGTAAGA+AGG | 0.478630 | 3.1:-59960089 | MS.gene30766:CDS |
| TTAATGCACTTAATATAAAG+AGG | 0.487114 | 3.1:-59960192 | MS.gene30766:CDS |
| AGCGTACCAAGAATAATTGC+AGG | 0.496459 | 3.1:-59960108 | MS.gene30766:CDS |
| GAATAATTGCAGGACATTGA+AGG | 0.513496 | 3.1:-59960098 | MS.gene30766:CDS |
| AACTGGGAAGGAAACTCGAT+TGG | 0.516558 | 3.1:+59960632 | None:intergenic |
| TGATTGAATTGTAGGTTCAA+AGG | 0.517088 | 3.1:-59960533 | MS.gene30766:intron |
| ATTGTGTGCGTTCGTGTTGG+TGG | 0.534997 | 3.1:-59960504 | MS.gene30766:CDS |
| GCTTTGGAGTGTTGAGAACT+GGG | 0.547804 | 3.1:+59960616 | None:intergenic |
| AATAATTGCAGGACATTGAA+GGG | 0.549157 | 3.1:-59960097 | MS.gene30766:CDS |
| ATTGAGAGTGAAGGTGCCAC+AGG | 0.552065 | 3.1:+59960681 | None:intergenic |
| ACTTAATATAAAGAGGTTGA+AGG | 0.557426 | 3.1:-59960185 | MS.gene30766:CDS |
| AACATTGTGTGCGTTCGTGT+TGG | 0.564683 | 3.1:-59960507 | MS.gene30766:CDS |
| TCAATCATCTCCAAAGGCCA+TGG | 0.572793 | 3.1:-59960663 | MS.gene30766:CDS |
| GTGCGTTCGTGTTGGTGGTG+TGG | 0.576835 | 3.1:-59960499 | MS.gene30766:CDS |
| TTGGTACGCTGTCCTCTACA+AGG | 0.578588 | 3.1:+59960121 | None:intergenic |
| AGAGGAATAAGGCATATTCA+GGG | 0.580912 | 3.1:-59960148 | MS.gene30766:CDS |
| TGGAGTGTTGAGAACTGGGA+AGG | 0.589530 | 3.1:+59960620 | None:intergenic |
| GTTAACAAATACATGACTGA+AGG | 0.596392 | 3.1:-59960324 | MS.gene30766:CDS |
| TCACTCTCAATCATCTCCAA+AGG | 0.619107 | 3.1:-59960669 | MS.gene30766:CDS |
| ATTCAGGGACTTCCTTGTAG+AGG | 0.621863 | 3.1:-59960133 | MS.gene30766:CDS |
| AGTACATTCATGGAGTTGGA+AGG | 0.622828 | 3.1:-59960440 | MS.gene30766:CDS |
| AGAAGAGCTTATTAGTCTCA+GGG | 0.625713 | 3.1:-59960352 | MS.gene30766:CDS |
| AAGGAGATTCAGTGTTACAG+AGG | 0.641827 | 3.1:-59960166 | MS.gene30766:CDS |
| TCTCAACACTCCAAAGCCAA+AGG | 0.652992 | 3.1:-59960610 | MS.gene30766:intron |
| CTCGATTGGAGAAGTGACCA+TGG | 0.660409 | 3.1:+59960646 | None:intergenic |
| TTGGAGATGATTGAGAGTGA+AGG | 0.661623 | 3.1:+59960672 | None:intergenic |
| ACAAACGCTTTCAATGCCTG+TGG | 0.693733 | 3.1:-59960697 | MS.gene30766:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTAATTGTAATTGTAA+TGG | - | chr3.1:59960517-59960536 | MS.gene30766:CDS | 15.0% |
| !! | TTAATGCACTTAATATAAAG+AGG | - | chr3.1:59960570-59960589 | MS.gene30766:intron | 20.0% |
| ! | ACTTAATATAAAGAGGTTGA+AGG | - | chr3.1:59960577-59960596 | MS.gene30766:intron | 25.0% |
| ! | TATGGAGAATAAAGTTACTA+AGG | - | chr3.1:59960377-59960396 | MS.gene30766:CDS | 25.0% |
| !!! | AATTCAATTCTCTTGTTGTT+TGG | + | chr3.1:59960294-59960313 | None:intergenic | 25.0% |
| AATAATTGCAGGACATTGAA+GGG | - | chr3.1:59960665-59960684 | MS.gene30766:CDS | 30.0% | |
| ATCAGAATCAGAATGGAATT+TGG | + | chr3.1:59960213-59960232 | None:intergenic | 30.0% | |
| CAATTCAATCAGAATCAGAA+TGG | + | chr3.1:59960220-59960239 | None:intergenic | 30.0% | |
| GATTCTAACTGATATCAGTA+TGG | - | chr3.1:59960359-59960378 | MS.gene30766:CDS | 30.0% | |
| GTTAACAAATACATGACTGA+AGG | - | chr3.1:59960438-59960457 | MS.gene30766:CDS | 30.0% | |
| TCTGATTCTGATTGAATTGT+AGG | - | chr3.1:59960221-59960240 | MS.gene30766:intron | 30.0% | |
| TGATTGAATTGTAGGTTCAA+AGG | - | chr3.1:59960229-59960248 | MS.gene30766:intron | 30.0% | |
| TTGTTTGTGAATTTCAGAGA+AGG | - | chr3.1:59960546-59960565 | MS.gene30766:intron | 30.0% | |
| AACCCTAATTGTGTTACCTT+TGG | + | chr3.1:59960171-59960190 | None:intergenic | 35.0% | |
| AAGCCAAAGGTAACACAATT+AGG | - | chr3.1:59960165-59960184 | MS.gene30766:CDS | 35.0% | |
| AGAGGAATAAGGCATATTCA+GGG | - | chr3.1:59960614-59960633 | MS.gene30766:CDS | 35.0% | |
| AGCCAAAGGTAACACAATTA+GGG | - | chr3.1:59960166-59960185 | MS.gene30766:CDS | 35.0% | |
| ATACATGACTGAAGGAGATT+TGG | - | chr3.1:59960446-59960465 | MS.gene30766:CDS | 35.0% | |
| CAATGTCCTGCAATTATTCT+TGG | + | chr3.1:59960663-59960682 | None:intergenic | 35.0% | |
| GAATAATTGCAGGACATTGA+AGG | - | chr3.1:59960664-59960683 | MS.gene30766:CDS | 35.0% | |
| TTCAGTGTTACAGAGGAATA+AGG | - | chr3.1:59960603-59960622 | MS.gene30766:intron | 35.0% | |
| ! | AAGAAGAGCTTATTAGTCTC+AGG | - | chr3.1:59960409-59960428 | MS.gene30766:CDS | 35.0% |
| ! | AATTGTGTTACCTTTGGCTT+TGG | + | chr3.1:59960165-59960184 | None:intergenic | 35.0% |
| ! | AGAAGAGCTTATTAGTCTCA+GGG | - | chr3.1:59960410-59960429 | MS.gene30766:CDS | 35.0% |
| ! | TTTTCGTTGCAGTACATTCA+TGG | - | chr3.1:59960312-59960331 | MS.gene30766:intron | 35.0% |
| AAGGAGATTCAGTGTTACAG+AGG | - | chr3.1:59960596-59960615 | MS.gene30766:intron | 40.0% | |
| AGCGTACCAAGAATAATTGC+AGG | - | chr3.1:59960654-59960673 | MS.gene30766:CDS | 40.0% | |
| AGTACATTCATGGAGTTGGA+AGG | - | chr3.1:59960322-59960341 | MS.gene30766:CDS | 40.0% | |
| CAGAGGAATAAGGCATATTC+AGG | - | chr3.1:59960613-59960632 | MS.gene30766:CDS | 40.0% | |
| TCACTCTCAATCATCTCCAA+AGG | - | chr3.1:59960093-59960112 | MS.gene30766:CDS | 40.0% | |
| TTGCAGTACATTCATGGAGT+TGG | - | chr3.1:59960318-59960337 | MS.gene30766:CDS | 40.0% | |
| TTGGAGATGATTGAGAGTGA+AGG | + | chr3.1:59960093-59960112 | None:intergenic | 40.0% | |
| AACATTGTGTGCGTTCGTGT+TGG | - | chr3.1:59960255-59960274 | MS.gene30766:intron | 45.0% | |
| AACTGGGAAGGAAACTCGAT+TGG | + | chr3.1:59960133-59960152 | None:intergenic | 45.0% | |
| ACAAACGCTTTCAATGCCTG+TGG | - | chr3.1:59960065-59960084 | MS.gene30766:CDS | 45.0% | |
| ATTCAGGGACTTCCTTGTAG+AGG | - | chr3.1:59960629-59960648 | MS.gene30766:CDS | 45.0% | |
| CAGGACATTGAAGGGTAAGA+AGG | - | chr3.1:59960673-59960692 | MS.gene30766:CDS | 45.0% | |
| GGTAAGAAGGTTACTGTTGC+TGG | - | chr3.1:59960686-59960705 | MS.gene30766:CDS | 45.0% | |
| TCAATCATCTCCAAAGGCCA+TGG | - | chr3.1:59960099-59960118 | MS.gene30766:CDS | 45.0% | |
| TCTCAACACTCCAAAGCCAA+AGG | - | chr3.1:59960152-59960171 | MS.gene30766:CDS | 45.0% | |
| !! | GCTTTGGAGTGTTGAGAACT+GGG | + | chr3.1:59960149-59960168 | None:intergenic | 45.0% |
| ATTGTGTGCGTTCGTGTTGG+TGG | - | chr3.1:59960258-59960277 | MS.gene30766:intron | 50.0% | |
| CTCGATTGGAGAAGTGACCA+TGG | + | chr3.1:59960119-59960138 | None:intergenic | 50.0% | |
| TTGGTACGCTGTCCTCTACA+AGG | + | chr3.1:59960644-59960663 | None:intergenic | 50.0% | |
| !! | ATTGAGAGTGAAGGTGCCAC+AGG | + | chr3.1:59960084-59960103 | None:intergenic | 50.0% |
| !! | GGCTTTGGAGTGTTGAGAAC+TGG | + | chr3.1:59960150-59960169 | None:intergenic | 50.0% |
| !! | TGGAGTGTTGAGAACTGGGA+AGG | + | chr3.1:59960145-59960164 | None:intergenic | 50.0% |
| GGAGAAGTGACCATGGCCTT+TGG | + | chr3.1:59960112-59960131 | None:intergenic | 55.0% | |
| !! | GTGCGTTCGTGTTGGTGGTG+TGG | - | chr3.1:59960263-59960282 | MS.gene30766:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 59960060 | 59960724 | 59960060 | ID=MS.gene30766 |
| chr3.1 | mRNA | 59960060 | 59960724 | 59960060 | ID=MS.gene30766.t1;Parent=MS.gene30766 |
| chr3.1 | exon | 59960611 | 59960724 | 59960611 | ID=MS.gene30766.t1.exon1;Parent=MS.gene30766.t1 |
| chr3.1 | CDS | 59960611 | 59960724 | 59960611 | ID=cds.MS.gene30766.t1;Parent=MS.gene30766.t1 |
| chr3.1 | exon | 59960317 | 59960541 | 59960317 | ID=MS.gene30766.t1.exon2;Parent=MS.gene30766.t1 |
| chr3.1 | CDS | 59960317 | 59960541 | 59960317 | ID=cds.MS.gene30766.t1;Parent=MS.gene30766.t1 |
| chr3.1 | exon | 59960060 | 59960221 | 59960060 | ID=MS.gene30766.t1.exon3;Parent=MS.gene30766.t1 |
| chr3.1 | CDS | 59960060 | 59960221 | 59960060 | ID=cds.MS.gene30766.t1;Parent=MS.gene30766.t1 |
| Gene Sequence |
| Protein sequence |
