Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33961.t1 | XP_024641456.1 | 96.5 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 5.80E-125 | 456.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33961.t1 | A0A396JVI3 | 96.5 | 228 | 8 | 0 | 1 | 228 | 1 | 228 | 4.2e-125 | 456.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene33961.t1 | TR | mTERF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene33961 | 0.80217 | 6.37E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene33961 | 0.836932 | 7.00E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene33961 | 0.811897 | 5.56E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene33961 | 0.807572 | 4.74E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene33961 | 0.831336 | 1.77E-55 | -1.69E-46 |
| MS.gene050122 | MS.gene33961 | 0.800466 | 1.42E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene33961 | 0.85131 | 9.65E-61 | -1.69E-46 |
| MS.gene050397 | MS.gene33961 | 0.804338 | 2.27E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene33961 | -0.800064 | 1.72E-48 | -1.69E-46 |
| MS.gene050432 | MS.gene33961 | 0.832635 | 8.45E-56 | -1.69E-46 |
| MS.gene050464 | MS.gene33961 | 0.802243 | 6.15E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene33961 | 0.825142 | 5.51E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene33961 | 0.885272 | 9.38E-72 | -1.69E-46 |
| MS.gene050812 | MS.gene33961 | 0.813144 | 2.97E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene33961 | 0.863503 | 2.38E-64 | -1.69E-46 |
| MS.gene051360 | MS.gene33961 | 0.822851 | 1.90E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene33961 | 0.824152 | 9.42E-54 | -1.69E-46 |
| MS.gene051582 | MS.gene33961 | 0.846464 | 2.14E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene33961 | 0.820492 | 6.66E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene33961 | 0.817003 | 4.13E-52 | -1.69E-46 |
| MS.gene051877 | MS.gene33961 | 0.804864 | 1.76E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene33961 | -0.815501 | 8.95E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene33961 | 0.841686 | 4.09E-58 | -1.69E-46 |
| MS.gene052078 | MS.gene33961 | 0.821688 | 3.54E-53 | -1.69E-46 |
| MS.gene052135 | MS.gene33961 | 0.811629 | 6.36E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene33961 | 0.883957 | 2.89E-71 | -1.69E-46 |
| MS.gene052253 | MS.gene33961 | 0.846262 | 2.43E-59 | -1.69E-46 |
| MS.gene052310 | MS.gene33961 | 0.848226 | 7.02E-60 | -1.69E-46 |
| MS.gene052322 | MS.gene33961 | 0.803927 | 2.76E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene33961 | 0.857889 | 1.20E-62 | -1.69E-46 |
| MS.gene052414 | MS.gene33961 | 0.85943 | 4.16E-63 | -1.69E-46 |
| MS.gene052421 | MS.gene33961 | 0.810055 | 1.39E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene33961 | 0.832019 | 1.20E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene33961 | 0.813301 | 2.74E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene33961 | 0.857928 | 1.17E-62 | -1.69E-46 |
| MS.gene052982 | MS.gene33961 | 0.813722 | 2.22E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene33961 | 0.84587 | 3.10E-59 | -1.69E-46 |
| MS.gene053836 | MS.gene33961 | 0.849218 | 3.72E-60 | -1.69E-46 |
| MS.gene053928 | MS.gene33961 | 0.822996 | 1.76E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene33961 | 0.825247 | 5.20E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene33961 | 0.811927 | 5.48E-51 | -1.69E-46 |
| MS.gene054349 | MS.gene33961 | 0.843533 | 1.32E-58 | -1.69E-46 |
| MS.gene054473 | MS.gene33961 | 0.80799 | 3.86E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene33961 | 0.800314 | 1.53E-48 | -1.69E-46 |
| MS.gene054719 | MS.gene33961 | 0.829485 | 5.01E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene33961 | 0.831368 | 1.74E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene33961 | 0.894139 | 3.26E-75 | -1.69E-46 |
| MS.gene055277 | MS.gene33961 | 0.822005 | 2.99E-53 | -1.69E-46 |
| MS.gene055369 | MS.gene33961 | 0.807557 | 4.77E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene33961 | 0.800171 | 1.63E-48 | -1.69E-46 |
| MS.gene055422 | MS.gene33961 | 0.832425 | 9.52E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene33961 | 0.82522 | 5.28E-54 | -1.69E-46 |
| MS.gene055539 | MS.gene33961 | 0.813263 | 2.80E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene33961 | 0.852904 | 3.40E-61 | -1.69E-46 |
| MS.gene055564 | MS.gene33961 | 0.818268 | 2.14E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene33961 | 0.828154 | 1.05E-54 | -1.69E-46 |
| MS.gene055859 | MS.gene33961 | 0.833969 | 3.93E-56 | -1.69E-46 |
| MS.gene05594 | MS.gene33961 | 0.812851 | 3.44E-51 | -1.69E-46 |
| MS.gene05602 | MS.gene33961 | 0.836501 | 9.02E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene33961 | 0.813704 | 2.24E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene33961 | 0.872804 | 2.40E-67 | -1.69E-46 |
| MS.gene056410 | MS.gene33961 | 0.811857 | 5.68E-51 | -1.69E-46 |
| MS.gene056497 | MS.gene33961 | 0.82648 | 2.65E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene33961 | 0.835281 | 1.84E-56 | -1.69E-46 |
| MS.gene056612 | MS.gene33961 | 0.821932 | 3.10E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene33961 | 0.819472 | 1.14E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene33961 | 0.841848 | 3.70E-58 | -1.69E-46 |
| MS.gene056796 | MS.gene33961 | 0.820625 | 6.21E-53 | -1.69E-46 |
| MS.gene05702 | MS.gene33961 | 0.832077 | 1.16E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene33961 | 0.84774 | 9.55E-60 | -1.69E-46 |
| MS.gene057207 | MS.gene33961 | 0.801208 | 1.00E-48 | -1.69E-46 |
| MS.gene057396 | MS.gene33961 | 0.81592 | 7.22E-52 | -1.69E-46 |
| MS.gene057448 | MS.gene33961 | 0.840539 | 8.18E-58 | -1.69E-46 |
| MS.gene057449 | MS.gene33961 | 0.81782 | 2.70E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene33961 | 0.836434 | 9.38E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene33961 | 0.873169 | 1.81E-67 | -1.69E-46 |
| MS.gene057823 | MS.gene33961 | 0.868629 | 5.66E-66 | -1.69E-46 |
| MS.gene057825 | MS.gene33961 | 0.808796 | 2.60E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene33961 | 0.868558 | 5.97E-66 | -1.69E-46 |
| MS.gene058007 | MS.gene33961 | 0.828659 | 7.95E-55 | -1.69E-46 |
| MS.gene058082 | MS.gene33961 | 0.84434 | 8.03E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene33961 | 0.836534 | 8.84E-57 | -1.69E-46 |
| MS.gene058142 | MS.gene33961 | 0.834376 | 3.11E-56 | -1.69E-46 |
| MS.gene058233 | MS.gene33961 | 0.825927 | 3.59E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene33961 | 0.836115 | 1.13E-56 | -1.69E-46 |
| MS.gene058365 | MS.gene33961 | 0.851425 | 8.95E-61 | -1.69E-46 |
| MS.gene058376 | MS.gene33961 | 0.814427 | 1.55E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene33961 | 0.805787 | 1.13E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene33961 | 0.837101 | 6.34E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene33961 | 0.813541 | 2.43E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene33961 | 0.857183 | 1.94E-62 | -1.69E-46 |
| MS.gene058787 | MS.gene33961 | 0.811885 | 5.60E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene33961 | 0.813522 | 2.45E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene33961 | 0.822688 | 2.07E-53 | -1.69E-46 |
| MS.gene058948 | MS.gene33961 | 0.817054 | 4.02E-52 | -1.69E-46 |
| MS.gene058949 | MS.gene33961 | 0.830464 | 2.89E-55 | -1.69E-46 |
| MS.gene059011 | MS.gene33961 | 0.817729 | 2.83E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene33961 | 0.851734 | 7.32E-61 | -1.69E-46 |
| MS.gene059141 | MS.gene33961 | 0.804222 | 2.40E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene33961 | 0.849828 | 2.52E-60 | -1.69E-46 |
| MS.gene059366 | MS.gene33961 | 0.818036 | 2.42E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene33961 | 0.865604 | 5.24E-65 | -1.69E-46 |
| MS.gene059597 | MS.gene33961 | 0.843637 | 1.24E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene33961 | 0.84885 | 4.71E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene33961 | 0.874759 | 5.25E-68 | -1.69E-46 |
| MS.gene059692 | MS.gene33961 | 0.874906 | 4.68E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene33961 | 0.879428 | 1.26E-69 | -1.69E-46 |
| MS.gene05984 | MS.gene33961 | 0.836163 | 1.10E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene33961 | 0.801104 | 1.05E-48 | -1.69E-46 |
| MS.gene06037 | MS.gene33961 | 0.827434 | 1.57E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene33961 | 0.857933 | 1.16E-62 | -1.69E-46 |
| MS.gene060407 | MS.gene33961 | 0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene33961 | 0.827319 | 1.67E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene33961 | 0.813708 | 2.23E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene33961 | 0.832288 | 1.03E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene33961 | 0.863901 | 1.79E-64 | -1.69E-46 |
| MS.gene061051 | MS.gene33961 | -0.836318 | 1.00E-56 | -1.69E-46 |
| MS.gene061154 | MS.gene33961 | 0.859412 | 4.21E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33961.t1 | MTR_1g096340 | 96.226 | 212 | 8 | 0 | 17 | 228 | 1 | 212 | 5.05e-152 | 421 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33961.t1 | AT4G09620 | 57.746 | 213 | 86 | 2 | 17 | 228 | 3 | 212 | 2.84e-81 | 242 |
| MS.gene33961.t1 | AT4G09620 | 57.746 | 213 | 86 | 2 | 17 | 228 | 3 | 212 | 2.84e-81 | 242 |
| MS.gene33961.t1 | AT4G09620 | 57.746 | 213 | 86 | 2 | 17 | 228 | 1 | 210 | 2.87e-81 | 242 |
Find 44 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTGTTCATTCTCCTTAC+TGG | 0.079985 | 1.4:+74948556 | MS.gene33961:CDS |
| TCCATTTACTGCCTCAAATT+TGG | 0.102598 | 1.4:-74948604 | None:intergenic |
| CCTTCGAAATCCAAAAGTTT+TGG | 0.174584 | 1.4:+74948794 | MS.gene33961:CDS |
| CCCAAATTTGAGGCAGTAAA+TGG | 0.185063 | 1.4:+74948603 | MS.gene33961:CDS |
| AAATTACATCCAAGAACTTC+TGG | 0.252185 | 1.4:-74948693 | None:intergenic |
| ATATTAAAACCCAAAACTTT+TGG | 0.261186 | 1.4:-74948804 | None:intergenic |
| CCATTTACTGCCTCAAATTT+GGG | 0.285378 | 1.4:-74948603 | None:intergenic |
| CCTTGTTCATTCTCCTTACT+GGG | 0.302250 | 1.4:+74948557 | MS.gene33961:CDS |
| GATATTTGGCGATGGAATAA+TGG | 0.339231 | 1.4:-74948334 | None:intergenic |
| CAATACTCCACTGCTCCTTC+AGG | 0.365711 | 1.4:-74948746 | None:intergenic |
| AAGATACTTGGAAAAGCATT+TGG | 0.395197 | 1.4:+74948534 | MS.gene33961:CDS |
| TTGGTAATGCAGGTATGGTT+GGG | 0.399629 | 1.4:+74946046 | MS.gene33961:intron |
| ATGGAACATTAGATTATCTA+AGG | 0.403508 | 1.4:+74948622 | MS.gene33961:CDS |
| ATCGTGCAGGCTGATCTTGC+TGG | 0.416752 | 1.4:+74948303 | MS.gene33961:intron |
| TGATTGTAAGGGAGATTGTA+AGG | 0.441638 | 1.4:+74948827 | MS.gene33961:CDS |
| GTATTGAAGGAAAATCTCTT+AGG | 0.453881 | 1.4:+74948763 | MS.gene33961:CDS |
| AGGCACAATGCACTAGATGC+TGG | 0.458361 | 1.4:+74948847 | MS.gene33961:CDS |
| CCTTCACCTTCTCGCCGCTC+TGG | 0.459797 | 1.4:+74945712 | MS.gene33961:CDS |
| TTTGGTAATGCAGGTATGGT+TGG | 0.461871 | 1.4:+74946045 | MS.gene33961:intron |
| TAACTTCGACGATGAAGAAA+AGG | 0.469350 | 1.4:+74948509 | MS.gene33961:CDS |
| AAGGAGCAGTGGAGTATTGA+AGG | 0.472993 | 1.4:+74948750 | MS.gene33961:CDS |
| GAAGAAAAGGACAAGATACT+TGG | 0.482017 | 1.4:+74948522 | MS.gene33961:CDS |
| TGGCGATGGAATAATGGAAA+AGG | 0.502232 | 1.4:-74948328 | None:intergenic |
| GTGATGAAGATCGGAGTATG+TGG | 0.505034 | 1.4:+74948457 | MS.gene33961:CDS |
| TCACGATCTTCTCCCCAGTA+AGG | 0.522126 | 1.4:-74948570 | None:intergenic |
| CAAATCATTCTACCAACCAT+TGG | 0.536249 | 1.4:+74948394 | MS.gene33961:CDS |
| GGCACAATGCACTAGATGCT+GGG | 0.562129 | 1.4:+74948848 | MS.gene33961:CDS |
| GAAGGAAGTTCCCAAATTTG+AGG | 0.566069 | 1.4:+74948593 | MS.gene33961:CDS |
| AGCACAGTTCTTGTGTTGCA+AGG | 0.570294 | 1.4:+74946107 | MS.gene33961:CDS |
| TAATCTCAAGTGATGAAGAT+CGG | 0.572690 | 1.4:+74948448 | MS.gene33961:CDS |
| GCAGAATCAGTAGCGAGAAG+AGG | 0.578077 | 1.4:-74946084 | None:intergenic |
| CCAGAGCGGCGAGAAGGTGA+AGG | 0.582029 | 1.4:-74945712 | None:intergenic |
| CCCAGTAAGGAGAATGAACA+AGG | 0.586733 | 1.4:-74948557 | None:intergenic |
| AACTAACCAGAGCGGCGAGA+AGG | 0.588677 | 1.4:-74945718 | None:intergenic |
| CTTGTTCATTCTCCTTACTG+GGG | 0.596220 | 1.4:+74948558 | MS.gene33961:CDS |
| TAAAGATCCTGAAGGAGCAG+TGG | 0.596954 | 1.4:+74948739 | MS.gene33961:CDS |
| ATGGTTGGTAGAATGATTTG+AGG | 0.603312 | 1.4:-74948391 | None:intergenic |
| AGAACGCAATATCCAATGGT+TGG | 0.612381 | 1.4:-74948406 | None:intergenic |
| TCGTAGAACGCAATATCCAA+TGG | 0.625607 | 1.4:-74948410 | None:intergenic |
| AGCTAATATAAAGATCCTGA+AGG | 0.630758 | 1.4:+74948731 | MS.gene33961:CDS |
| CTGGGGAGAAGATCGTGAGA+AGG | 0.634124 | 1.4:+74948575 | MS.gene33961:CDS |
| CAAGTCTTGCAAAAGCAAAG+TGG | 0.634464 | 1.4:+74948367 | MS.gene33961:CDS |
| TGATGAAGATCGGAGTATGT+GGG | 0.637812 | 1.4:+74948458 | MS.gene33961:CDS |
| TTGAAGCTAACTAACCAGAG+CGG | 0.785278 | 1.4:-74945726 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATAAAGTCAATGTTTT+TGG | - | chr1.4:74945783-74945802 | None:intergenic | 15.0% |
| !!! | AAAATAAAGTCAATGTTTTT+GGG | - | chr1.4:74945782-74945801 | None:intergenic | 15.0% |
| !!! | ATTTTTAAATTAATAGAGTG+AGG | - | chr1.4:74946421-74946440 | None:intergenic | 15.0% |
| !!! | TTTAATTGTAAAGCTTTAAA+GGG | + | chr1.4:74947120-74947139 | MS.gene33961:intron | 15.0% |
| !!! | TTTTAATTGTAAAGCTTTAA+AGG | + | chr1.4:74947119-74947138 | MS.gene33961:intron | 15.0% |
| !! | ACTATTATTCATGTTTAGAA+AGG | + | chr1.4:74946222-74946241 | MS.gene33961:intron | 20.0% |
| !! | ATGCATAAGTTTAATATTGA+TGG | - | chr1.4:74948170-74948189 | None:intergenic | 20.0% |
| !! | ATTAATTGGTTATCTTTCTT+TGG | + | chr1.4:74947433-74947452 | MS.gene33961:intron | 20.0% |
| !!! | ATATTAAAACCCAAAACTTT+TGG | - | chr1.4:74948807-74948826 | None:intergenic | 20.0% |
| !!! | CTTAACATTTATTTTCTAGT+GGG | + | chr1.4:74946141-74946160 | MS.gene33961:intron | 20.0% |
| !!! | GGTTTTAATATTGATTGTAA+GGG | + | chr1.4:74948816-74948835 | MS.gene33961:CDS | 20.0% |
| !!! | TCTTAACATTTATTTTCTAG+TGG | + | chr1.4:74946140-74946159 | MS.gene33961:intron | 20.0% |
| !!! | TGACTTTATTTTTCAATTTC+TGG | + | chr1.4:74945790-74945809 | MS.gene33961:intron | 20.0% |
| !!! | TTAGTTATGTGTTGTTTTTT+TGG | + | chr1.4:74946027-74946046 | MS.gene33961:intron | 20.0% |
| !!! | TTTTAGGACTTTGTATTTAA+AGG | + | chr1.4:74947792-74947811 | MS.gene33961:intron | 20.0% |
| ! | AAAAAATTTCCAGAAGTTCT+TGG | + | chr1.4:74948684-74948703 | MS.gene33961:CDS | 25.0% |
| ! | AATGCAAATAGTAATGATGT+AGG | + | chr1.4:74947163-74947182 | MS.gene33961:intron | 25.0% |
| ! | AGGATTATGAATCCTTAATA+TGG | - | chr1.4:74946401-74946420 | None:intergenic | 25.0% |
| ! | ATGGAACATTAGATTATCTA+AGG | + | chr1.4:74948622-74948641 | MS.gene33961:CDS | 25.0% |
| ! | ATGTAAAAAAATTCACTGGT+AGG | + | chr1.4:74948233-74948252 | MS.gene33961:intron | 25.0% |
| ! | CAAGATGTAAAAAAATTCAC+TGG | + | chr1.4:74948229-74948248 | MS.gene33961:intron | 25.0% |
| ! | CAAGCATTCAAAATTAATCA+TGG | + | chr1.4:74947695-74947714 | MS.gene33961:intron | 25.0% |
| ! | CTATGTTTACCATACATATT+AGG | + | chr1.4:74947870-74947889 | MS.gene33961:intron | 25.0% |
| ! | GGTTGAAAAAAACTTGAATT+TGG | + | chr1.4:74947191-74947210 | MS.gene33961:intron | 25.0% |
| ! | GTATTTAAAGGATATCTTCA+TGG | + | chr1.4:74947804-74947823 | MS.gene33961:intron | 25.0% |
| ! | TACACAAATCATCCATATTA+AGG | + | chr1.4:74946386-74946405 | MS.gene33961:intron | 25.0% |
| ! | TAGTACAAAATGTTGTCAAA+TGG | - | chr1.4:74947553-74947572 | None:intergenic | 25.0% |
| ! | TCTGCGTATATTCATAAATT+GGG | - | chr1.4:74946312-74946331 | None:intergenic | 25.0% |
| !! | AATGGTTTGTCTGTATTAAT+TGG | + | chr1.4:74946196-74946215 | MS.gene33961:intron | 25.0% |
| !! | CTAAAACTGTATTCTTTTCA+AGG | - | chr1.4:74947913-74947932 | None:intergenic | 25.0% |
| !! | TAATATGGATGATTTGTGTA+AGG | - | chr1.4:74946386-74946405 | None:intergenic | 25.0% |
| !! | TTTTGTACTAAATAGTGCAT+CGG | + | chr1.4:74947563-74947582 | MS.gene33961:intron | 25.0% |
| !!! | AAAGAATACAGTTTTAGTTC+TGG | + | chr1.4:74947916-74947935 | MS.gene33961:intron | 25.0% |
| !!! | ATTGCTGTTTTGTTACAATT+CGG | + | chr1.4:74946001-74946020 | MS.gene33961:intron | 25.0% |
| !!! | ATTTATTTTCTAGTGGGTTA+TGG | + | chr1.4:74946147-74946166 | MS.gene33961:intron | 25.0% |
| !!! | CCACTTTTTCAAATTATTAC+CGG | + | chr1.4:74945909-74945928 | MS.gene33961:intron | 25.0% |
| !!! | GGGTTTTAATATTGATTGTA+AGG | + | chr1.4:74948815-74948834 | MS.gene33961:CDS | 25.0% |
| !!! | TGGAAATTTTTTAAGCAACT+TGG | - | chr1.4:74948676-74948695 | None:intergenic | 25.0% |
| AAAAATCTGATATTTGGCGA+TGG | - | chr1.4:74948345-74948364 | None:intergenic | 30.0% | |
| AAAGAGACATGAGATTGAAA+AGG | - | chr1.4:74945752-74945771 | None:intergenic | 30.0% | |
| AAATTACATCCAAGAACTTC+TGG | - | chr1.4:74948696-74948715 | None:intergenic | 30.0% | |
| AATGGGGTAAAATGAATTGA+AGG | + | chr1.4:74946248-74946267 | MS.gene33961:intron | 30.0% | |
| AATGTTACAATTTCCAACTC+TGG | - | chr1.4:74948206-74948225 | None:intergenic | 30.0% | |
| ACAAAGTCCTAAAAGACATT+GGG | - | chr1.4:74947786-74947805 | None:intergenic | 30.0% | |
| AGCTAATAGCCTAATATGTA+TGG | - | chr1.4:74947882-74947901 | None:intergenic | 30.0% | |
| AGCTAATATAAAGATCCTGA+AGG | + | chr1.4:74948731-74948750 | MS.gene33961:CDS | 30.0% | |
| ATAGTAATGATGTAGGTGAA+TGG | + | chr1.4:74947170-74947189 | MS.gene33961:intron | 30.0% | |
| ATCTTGGCAATAATTGGAAA+TGG | + | chr1.4:74946914-74946933 | MS.gene33961:intron | 30.0% | |
| ATGACATGTAACCTATATCT+AGG | - | chr1.4:74948022-74948041 | None:intergenic | 30.0% | |
| CAATTTATGAATATACGCAG+AGG | + | chr1.4:74946311-74946330 | MS.gene33961:intron | 30.0% | |
| CCGGTAATAATTTGAAAAAG+TGG | - | chr1.4:74945912-74945931 | None:intergenic | 30.0% | |
| CTCTGCGTATATTCATAAAT+TGG | - | chr1.4:74946313-74946332 | None:intergenic | 30.0% | |
| CTTGGCAAAAATCTGATATT+TGG | - | chr1.4:74948351-74948370 | None:intergenic | 30.0% | |
| GACTTTAAATTCCAGTCTAT+GGG | - | chr1.4:74947764-74947783 | None:intergenic | 30.0% | |
| GTATTGAAGGAAAATCTCTT+AGG | + | chr1.4:74948763-74948782 | MS.gene33961:CDS | 30.0% | |
| TAATCTCAAGTGATGAAGAT+CGG | + | chr1.4:74948448-74948467 | MS.gene33961:CDS | 30.0% | |
| TACAAAATGTTGTCAAATGG+CGG | - | chr1.4:74947550-74947569 | None:intergenic | 30.0% | |
| TACAAAGTCCTAAAAGACAT+TGG | - | chr1.4:74947787-74947806 | None:intergenic | 30.0% | |
| TCTTCAACATACCTAGATAT+AGG | + | chr1.4:74948008-74948027 | MS.gene33961:intron | 30.0% | |
| TGAATTTGGTTATTCTGTGT+TGG | + | chr1.4:74947205-74947224 | MS.gene33961:intron | 30.0% | |
| TTCCAATTATTGCCAAGATT+GGG | - | chr1.4:74946913-74946932 | None:intergenic | 30.0% | |
| TTTCCAATTATTGCCAAGAT+TGG | - | chr1.4:74946914-74946933 | None:intergenic | 30.0% | |
| TTTGTACTAAATAGTGCATC+GGG | + | chr1.4:74947564-74947583 | MS.gene33961:intron | 30.0% | |
| ! | AAGATTTTTGAATTCTGCTG+TGG | + | chr1.4:74948076-74948095 | MS.gene33961:intron | 30.0% |
| ! | ATATTCTAGAAGAATCGATG+GGG | - | chr1.4:74946524-74946543 | None:intergenic | 30.0% |
| ! | ATATTTAACTTCCCATAGAC+TGG | + | chr1.4:74947750-74947769 | MS.gene33961:intron | 30.0% |
| ! | ATGTTTAGAAAGGTGTAATG+GGG | + | chr1.4:74946232-74946251 | MS.gene33961:intron | 30.0% |
| ! | CAATTGTTGATGAAAAGCAT+TGG | - | chr1.4:74947275-74947294 | None:intergenic | 30.0% |
| ! | CATATTCTAGAAGAATCGAT+GGG | - | chr1.4:74946525-74946544 | None:intergenic | 30.0% |
| ! | CATGTTTAGAAAGGTGTAAT+GGG | + | chr1.4:74946231-74946250 | MS.gene33961:intron | 30.0% |
| ! | CTTCGAAATCCAAAAGTTTT+GGG | + | chr1.4:74948795-74948814 | MS.gene33961:CDS | 30.0% |
| ! | GTTTTACGGTGACTATTATA+TGG | + | chr1.4:74947612-74947631 | MS.gene33961:intron | 30.0% |
| ! | TCATGGTTTCATACTTTTGT+TGG | + | chr1.4:74947821-74947840 | MS.gene33961:intron | 30.0% |
| ! | TCATGTTTAGAAAGGTGTAA+TGG | + | chr1.4:74946230-74946249 | MS.gene33961:intron | 30.0% |
| ! | TTAAAGTCCCAATGTCTTTT+AGG | + | chr1.4:74947776-74947795 | MS.gene33961:intron | 30.0% |
| !! | AAAGTCGATTTTAAAGAGGA+AGG | - | chr1.4:74946601-74946620 | None:intergenic | 30.0% |
| !! | AAGATACTTGGAAAAGCATT+TGG | + | chr1.4:74948534-74948553 | MS.gene33961:CDS | 30.0% |
| !! | CTGACTGTTTTATTGAATTG+TGG | + | chr1.4:74946274-74946293 | MS.gene33961:intron | 30.0% |
| !! | TCTCTGTCTTCTGAAATTAA+AGG | + | chr1.4:74947055-74947074 | MS.gene33961:intron | 30.0% |
| !! | TGTCTTCTGAAATTAAAGGT+TGG | + | chr1.4:74947059-74947078 | MS.gene33961:intron | 30.0% |
| !! | TTAAAGAGGAAGGTATTGTA+AGG | - | chr1.4:74946591-74946610 | None:intergenic | 30.0% |
| !!! | AACTTTTAGAATAAGGGAAG+TGG | + | chr1.4:74946353-74946372 | MS.gene33961:intron | 30.0% |
| !!! | AGGAGAGAACTTTTAGAATA+AGG | + | chr1.4:74946346-74946365 | MS.gene33961:intron | 30.0% |
| !!! | GGAGAGAACTTTTAGAATAA+GGG | + | chr1.4:74946347-74946366 | MS.gene33961:intron | 30.0% |
| !!! | TGTTGTTTTTTTGGTAATGC+AGG | + | chr1.4:74946036-74946055 | MS.gene33961:intron | 30.0% |
| !!! | TTTTTTTGGTAATGCAGGTA+TGG | + | chr1.4:74946041-74946060 | MS.gene33961:intron | 30.0% |
| AAGATCATTCAGCCTTGAAT+TGG | + | chr1.4:74946452-74946471 | MS.gene33961:intron | 35.0% | |
| AATCCAATAAGCTGGTTGAA+TGG | + | chr1.4:74947359-74947378 | MS.gene33961:intron | 35.0% | |
| ACTTATGCATACAGATCCAA+AGG | + | chr1.4:74948180-74948199 | MS.gene33961:intron | 35.0% | |
| AGAATGCGTAGCAGATTAAT+TGG | + | chr1.4:74947419-74947438 | MS.gene33961:intron | 35.0% | |
| AGCTGGGATATGTAAAAAAC+TGG | + | chr1.4:74946842-74946861 | MS.gene33961:intron | 35.0% | |
| AGTAACGATATGCTAGTTGA+TGG | + | chr1.4:74947249-74947268 | MS.gene33961:intron | 35.0% | |
| ATATCGACACATGTGATATG+CGG | + | chr1.4:74945870-74945889 | MS.gene33961:intron | 35.0% | |
| ATGACAAAGGAAGAGAAGAT+AGG | - | chr1.4:74946556-74946575 | None:intergenic | 35.0% | |
| CAAATCATTCTACCAACCAT+TGG | + | chr1.4:74948394-74948413 | MS.gene33961:CDS | 35.0% | |
| CCATTTACTGCCTCAAATTT+GGG | - | chr1.4:74948606-74948625 | None:intergenic | 35.0% | |
| CGTACACAATATTTAGACTC+TGG | - | chr1.4:74948283-74948302 | None:intergenic | 35.0% | |
| GAAGAAAAGGACAAGATACT+TGG | + | chr1.4:74948522-74948541 | MS.gene33961:CDS | 35.0% | |
| GATATTTGGCGATGGAATAA+TGG | - | chr1.4:74948337-74948356 | None:intergenic | 35.0% | |
| GCTGGGATATGTAAAAAACT+GGG | + | chr1.4:74946843-74946862 | MS.gene33961:intron | 35.0% | |
| GGACTTTAAATTCCAGTCTA+TGG | - | chr1.4:74947765-74947784 | None:intergenic | 35.0% | |
| GGGATAATGATGTAGGATAT+TGG | + | chr1.4:74946639-74946658 | MS.gene33961:intron | 35.0% | |
| GTGACTATTATATGGAGAGT+GGG | + | chr1.4:74947620-74947639 | MS.gene33961:intron | 35.0% | |
| GTTCTTTGATGAATATCAGC+TGG | - | chr1.4:74948047-74948066 | None:intergenic | 35.0% | |
| TAACTTCGACGATGAAGAAA+AGG | + | chr1.4:74948509-74948528 | MS.gene33961:CDS | 35.0% | |
| TACTACATCCATAGCCAAAA+TGG | - | chr1.4:74947314-74947333 | None:intergenic | 35.0% | |
| TATGTGTGTAGTGTAGGAAA+TGG | + | chr1.4:74946178-74946197 | MS.gene33961:intron | 35.0% | |
| TCCAATTATTGCCAAGATTG+GGG | - | chr1.4:74946912-74946931 | None:intergenic | 35.0% | |
| TCCATTTACTGCCTCAAATT+TGG | - | chr1.4:74948607-74948626 | None:intergenic | 35.0% | |
| TCTCTTAAACAGTTTCAGCT+GGG | + | chr1.4:74946826-74946845 | MS.gene33961:intron | 35.0% | |
| TGAAGTTGGGATAATGATGT+AGG | + | chr1.4:74946632-74946651 | MS.gene33961:intron | 35.0% | |
| TGATTGTAAGGGAGATTGTA+AGG | + | chr1.4:74948827-74948846 | MS.gene33961:CDS | 35.0% | |
| TTGTACTAAATAGTGCATCG+GGG | + | chr1.4:74947565-74947584 | MS.gene33961:intron | 35.0% | |
| ! | CAGAGATGCTTTATTGAATC+TGG | - | chr1.4:74947041-74947060 | None:intergenic | 35.0% |
| ! | CCAAAACTTTTGGATTTCGA+AGG | - | chr1.4:74948797-74948816 | None:intergenic | 35.0% |
| ! | CCTTCGAAATCCAAAAGTTT+TGG | + | chr1.4:74948794-74948813 | MS.gene33961:CDS | 35.0% |
| ! | GCATATTCTAGAAGAATCGA+TGG | - | chr1.4:74946526-74946545 | None:intergenic | 35.0% |
| ! | TAAAATCGACTTTGTCCTCA+AGG | + | chr1.4:74946608-74946627 | MS.gene33961:intron | 35.0% |
| ! | TCATAGGAAGAGGTATGTAA+AGG | + | chr1.4:74946791-74946810 | MS.gene33961:intron | 35.0% |
| !! | ATGGTTGGTAGAATGATTTG+AGG | - | chr1.4:74948394-74948413 | None:intergenic | 35.0% |
| !! | CTCCATTCTGATTCGTTTTA+CGG | + | chr1.4:74947598-74947617 | MS.gene33961:intron | 35.0% |
| !! | GGACAAAGTCGATTTTAAAG+AGG | - | chr1.4:74946605-74946624 | None:intergenic | 35.0% |
| !! | GGTTATCTTTCTTTGGAGTT+AGG | + | chr1.4:74947440-74947459 | MS.gene33961:intron | 35.0% |
| !!! | GAATACAGTTTTAGTTCTGG+AGG | + | chr1.4:74947919-74947938 | MS.gene33961:intron | 35.0% |
| !!! | TATTTTCTAGTGGGTTATGG+TGG | + | chr1.4:74946150-74946169 | MS.gene33961:intron | 35.0% |
| AAATTCACTGGTAGGACTGT+AGG | + | chr1.4:74948241-74948260 | MS.gene33961:intron | 40.0% | |
| AATATTGTGTACGATCGTGC+AGG | + | chr1.4:74948290-74948309 | MS.gene33961:intron | 40.0% | |
| AATTATTGCCAAGATTGGGG+TGG | - | chr1.4:74946909-74946928 | None:intergenic | 40.0% | |
| ACCCCAATCTTGGCAATAAT+TGG | + | chr1.4:74946908-74946927 | MS.gene33961:intron | 40.0% | |
| ACGAAACTACACGTTGATAC+CGG | - | chr1.4:74945931-74945950 | None:intergenic | 40.0% | |
| AGAACGCAATATCCAATGGT+TGG | - | chr1.4:74948409-74948428 | None:intergenic | 40.0% | |
| ATATTGGCATAGTCCTCACA+GGG | + | chr1.4:74946655-74946674 | MS.gene33961:intron | 40.0% | |
| ATCTATGATTGACAACGCTG+AGG | - | chr1.4:74947467-74947486 | None:intergenic | 40.0% | |
| CAAGTCTTGCAAAAGCAAAG+TGG | + | chr1.4:74948367-74948386 | MS.gene33961:CDS | 40.0% | |
| CACCGTAAAACGAATCAGAA+TGG | - | chr1.4:74947603-74947622 | None:intergenic | 40.0% | |
| CCTATGACAACCAGTGAATT+AGG | - | chr1.4:74946778-74946797 | None:intergenic | 40.0% | |
| CCTTGTTCATTCTCCTTACT+GGG | + | chr1.4:74948557-74948576 | MS.gene33961:CDS | 40.0% | |
| CTTGTTCATTCTCCTTACTG+GGG | + | chr1.4:74948558-74948577 | MS.gene33961:CDS | 40.0% | |
| GAAGGAAGTTCCCAAATTTG+AGG | + | chr1.4:74948593-74948612 | MS.gene33961:CDS | 40.0% | |
| GCTTTGTATGTGTGTAGTGT+AGG | + | chr1.4:74946172-74946191 | MS.gene33961:intron | 40.0% | |
| GGACTGTAGGAGGATAATAA+TGG | + | chr1.4:74948254-74948273 | MS.gene33961:intron | 40.0% | |
| GGTGACTATTATATGGAGAG+TGG | + | chr1.4:74947619-74947638 | MS.gene33961:intron | 40.0% | |
| GTCTCTTAAACAGTTTCAGC+TGG | + | chr1.4:74946825-74946844 | MS.gene33961:intron | 40.0% | |
| TATGAATATACGCAGAGGAG+AGG | + | chr1.4:74946316-74946335 | MS.gene33961:intron | 40.0% | |
| TCGTAGAACGCAATATCCAA+TGG | - | chr1.4:74948413-74948432 | None:intergenic | 40.0% | |
| TGACCATTCAACCAGCTTAT+TGG | - | chr1.4:74947365-74947384 | None:intergenic | 40.0% | |
| TGATGAAGATCGGAGTATGT+GGG | + | chr1.4:74948458-74948477 | MS.gene33961:CDS | 40.0% | |
| TGTGATAGGACCTAATTCAC+TGG | + | chr1.4:74946765-74946784 | MS.gene33961:intron | 40.0% | |
| TGTTGAAAATGCCTCGTAGA+AGG | - | chr1.4:74947677-74947696 | None:intergenic | 40.0% | |
| TTATCCCAACTTCAACCTTG+AGG | - | chr1.4:74946626-74946645 | None:intergenic | 40.0% | |
| TTCTCTTCCTTTGTCATAGC+TGG | + | chr1.4:74946559-74946578 | MS.gene33961:intron | 40.0% | |
| TTGAAGCTAACTAACCAGAG+CGG | - | chr1.4:74945729-74945748 | None:intergenic | 40.0% | |
| TTGCTCACAATCCAATAAGC+TGG | + | chr1.4:74947351-74947370 | MS.gene33961:intron | 40.0% | |
| TTGTCCTCAAGGTTGAAGTT+GGG | + | chr1.4:74946619-74946638 | MS.gene33961:intron | 40.0% | |
| TTTGTCCTCAAGGTTGAAGT+TGG | + | chr1.4:74946618-74946637 | MS.gene33961:intron | 40.0% | |
| ! | CCCAAATTTGAGGCAGTAAA+TGG | + | chr1.4:74948603-74948622 | MS.gene33961:CDS | 40.0% |
| ! | CCTAATTCACTGGTTGTCAT+AGG | + | chr1.4:74946775-74946794 | MS.gene33961:intron | 40.0% |
| ! | CTTTTGGATTTCGAAGGAGA+AGG | - | chr1.4:74948791-74948810 | None:intergenic | 40.0% |
| ! | TGGCGATGGAATAATGGAAA+AGG | - | chr1.4:74948331-74948350 | None:intergenic | 40.0% |
| ! | TTTTTACAGCTCCTTCTACG+AGG | + | chr1.4:74947663-74947682 | MS.gene33961:intron | 40.0% |
| !! | CACTTTGCTTTTGCAAGACT+TGG | - | chr1.4:74948369-74948388 | None:intergenic | 40.0% |
| !! | TTGGTAATGCAGGTATGGTT+GGG | + | chr1.4:74946046-74946065 | MS.gene33961:intron | 40.0% |
| !! | TTTGGTAATGCAGGTATGGT+TGG | + | chr1.4:74946045-74946064 | MS.gene33961:intron | 40.0% |
| !!! | ACAGTTTTAGTTCTGGAGGT+TGG | + | chr1.4:74947923-74947942 | MS.gene33961:intron | 40.0% |
| !!! | AGAAGTTGCCATTTTGGCTA+TGG | + | chr1.4:74947303-74947322 | MS.gene33961:intron | 40.0% |
| !!! | TCTGGAGGTTGGCTTTTATA+CGG | + | chr1.4:74947934-74947953 | MS.gene33961:intron | 40.0% |
| ACAGCAAGCTCTTGTTCAGT+GGG | - | chr1.4:74946704-74946723 | None:intergenic | 45.0% | |
| AGCAACGGCTAACCAATTCA+AGG | - | chr1.4:74946467-74946486 | None:intergenic | 45.0% | |
| AGCACAGTTCTTGTGTTGCA+AGG | + | chr1.4:74946107-74946126 | MS.gene33961:CDS | 45.0% | |
| CCCAGTAAGGAGAATGAACA+AGG | - | chr1.4:74948560-74948579 | None:intergenic | 45.0% | |
| CTGTCCTTGAATGATCTCAC+GGG | + | chr1.4:74946720-74946739 | MS.gene33961:intron | 45.0% | |
| CTTGTTCAGTGGGAACACTT+GGG | - | chr1.4:74946694-74946713 | None:intergenic | 45.0% | |
| GATATTGGCATAGTCCTCAC+AGG | + | chr1.4:74946654-74946673 | MS.gene33961:intron | 45.0% | |
| GCTGTCCTTGAATGATCTCA+CGG | + | chr1.4:74946719-74946738 | MS.gene33961:intron | 45.0% | |
| GGAAACTAATGTTCCCTGTG+AGG | - | chr1.4:74946671-74946690 | None:intergenic | 45.0% | |
| GTATTCTACCACCCCAATCT+TGG | + | chr1.4:74946898-74946917 | MS.gene33961:intron | 45.0% | |
| GTGATGAAGATCGGAGTATG+TGG | + | chr1.4:74948457-74948476 | MS.gene33961:CDS | 45.0% | |
| TAAAGATCCTGAAGGAGCAG+TGG | + | chr1.4:74948739-74948758 | MS.gene33961:CDS | 45.0% | |
| TCTTGTTCAGTGGGAACACT+TGG | - | chr1.4:74946695-74946714 | None:intergenic | 45.0% | |
| TTGTTCAGTGGGAACACTTG+GGG | - | chr1.4:74946693-74946712 | None:intergenic | 45.0% | |
| ! | CAATTTCCAACTCTGGCCTT+TGG | - | chr1.4:74948199-74948218 | None:intergenic | 45.0% |
| ! | GCCTTGTTCATTCTCCTTAC+TGG | + | chr1.4:74948556-74948575 | MS.gene33961:CDS | 45.0% |
| ! | TCACTGGTTGTCATAGGAAG+AGG | + | chr1.4:74946781-74946800 | MS.gene33961:intron | 45.0% |
| ! | TTCTAGAAGAATCGATGGGG+AGG | - | chr1.4:74946521-74946540 | None:intergenic | 45.0% |
| !! | AAGGAGCAGTGGAGTATTGA+AGG | + | chr1.4:74948750-74948769 | MS.gene33961:CDS | 45.0% |
| !! | GAGTGCAGAAGTTGCCATTT+TGG | + | chr1.4:74947297-74947316 | MS.gene33961:intron | 45.0% |
| AAGACAGGATGTGCAACTGC+AGG | - | chr1.4:74946975-74946994 | None:intergenic | 50.0% | |
| ACAGATCCAAAGGCCAGAGT+TGG | + | chr1.4:74948190-74948209 | MS.gene33961:intron | 50.0% | |
| AGGCACAATGCACTAGATGC+TGG | + | chr1.4:74948847-74948866 | MS.gene33961:CDS | 50.0% | |
| ATATACGCAGAGGAGAGGAG+AGG | + | chr1.4:74946321-74946340 | MS.gene33961:intron | 50.0% | |
| CAATACTCCACTGCTCCTTC+AGG | - | chr1.4:74948749-74948768 | None:intergenic | 50.0% | |
| CAGACCCGTGAGATCATTCA+AGG | - | chr1.4:74946727-74946746 | None:intergenic | 50.0% | |
| CGGGTCTGTAAAACTGCTAC+TGG | + | chr1.4:74946739-74946758 | MS.gene33961:intron | 50.0% | |
| GAAGCTGCCAGCTATGACAA+AGG | - | chr1.4:74946569-74946588 | None:intergenic | 50.0% | |
| GACAGCAAGCTCTTGTTCAG+TGG | - | chr1.4:74946705-74946724 | None:intergenic | 50.0% | |
| GCAGAATCAGTAGCGAGAAG+AGG | - | chr1.4:74946087-74946106 | None:intergenic | 50.0% | |
| GGCACAATGCACTAGATGCT+GGG | + | chr1.4:74948848-74948867 | MS.gene33961:CDS | 50.0% | |
| TCACGATCTTCTCCCCAGTA+AGG | - | chr1.4:74948573-74948592 | None:intergenic | 50.0% | |
| TGTTCAGTGGGAACACTTGG+GGG | - | chr1.4:74946692-74946711 | None:intergenic | 50.0% | |
| TTCACTGGTAGGACTGTAGG+AGG | + | chr1.4:74948244-74948263 | MS.gene33961:intron | 50.0% | |
| ! | ACTGCTACTGGCTGTGTGAT+AGG | + | chr1.4:74946751-74946770 | MS.gene33961:intron | 50.0% |
| ! | CAAGCTCTAGCATCTTGCAG+AGG | - | chr1.4:74946879-74946898 | None:intergenic | 50.0% |
| ! | TTGGCTCGCTAAGTGGAAAC+TGG | + | chr1.4:74947224-74947243 | MS.gene33961:intron | 50.0% |
| !! | ACTGCAGGTTGGTGGTGATA+AGG | - | chr1.4:74946960-74946979 | None:intergenic | 50.0% |
| !! | TTCTGTGTTGGCTCGCTAAG+TGG | + | chr1.4:74947217-74947236 | MS.gene33961:intron | 50.0% |
| AACTAACCAGAGCGGCGAGA+AGG | - | chr1.4:74945721-74945740 | None:intergenic | 55.0% | |
| AGAATCCAGGAAGCAGGGAG+AGG | - | chr1.4:74946495-74946514 | None:intergenic | 55.0% | |
| ATCGTGCAGGCTGATCTTGC+TGG | + | chr1.4:74948303-74948322 | MS.gene33961:intron | 55.0% | |
| CAGGATGTGCAACTGCAGGT+TGG | - | chr1.4:74946971-74946990 | None:intergenic | 55.0% | |
| CGTGTAGTTTCGTGCTGTGC+TGG | + | chr1.4:74945938-74945957 | MS.gene33961:intron | 55.0% | |
| CTCCCTGCTTCCTGGATTCT+CGG | + | chr1.4:74946495-74946514 | MS.gene33961:intron | 55.0% | |
| CTGGGGAGAAGATCGTGAGA+AGG | + | chr1.4:74948575-74948594 | MS.gene33961:CDS | 55.0% | |
| GGTCAGCGCTGTAGTGTTCA+TGG | + | chr1.4:74947380-74947399 | MS.gene33961:intron | 55.0% | |
| TAACTTGACCCGCACCCAAC+AGG | - | chr1.4:74947011-74947030 | None:intergenic | 55.0% | |
| TGCTGGTGTGGTGTCTGTGT+TGG | + | chr1.4:74945955-74945974 | MS.gene33961:intron | 55.0% | |
| TGGTGTGGTGTCTGTGTTGG+TGG | + | chr1.4:74945958-74945977 | MS.gene33961:intron | 55.0% | |
| TTGAGCCCTCGTGACCTGTT+GGG | + | chr1.4:74946994-74947013 | MS.gene33961:intron | 55.0% | |
| TTTGAGCCCTCGTGACCTGT+TGG | + | chr1.4:74946993-74947012 | MS.gene33961:intron | 55.0% | |
| ! | AGTTTCGTGCTGTGCTGGTG+TGG | + | chr1.4:74945943-74945962 | MS.gene33961:intron | 55.0% |
| ! | GATGTGCAACTGCAGGTTGG+TGG | - | chr1.4:74946968-74946987 | None:intergenic | 55.0% |
| AGGCCGAGAATCCAGGAAGC+AGG | - | chr1.4:74946501-74946520 | None:intergenic | 60.0% | |
| GGCCGAGAATCCAGGAAGCA+GGG | - | chr1.4:74946500-74946519 | None:intergenic | 60.0% | |
| GGTCACGAGGGCTCAAAGAC+AGG | - | chr1.4:74946990-74947009 | None:intergenic | 60.0% | |
| ! | CAGGGAGAGGAGTGCAGCAA+CGG | - | chr1.4:74946482-74946501 | None:intergenic | 60.0% |
| CCAGAGCGGCGAGAAGGTGA+AGG | - | chr1.4:74945715-74945734 | None:intergenic | 65.0% | |
| CCCTCGTGACCTGTTGGGTG+CGG | + | chr1.4:74946999-74947018 | MS.gene33961:intron | 65.0% | |
| CCGCACCCAACAGGTCACGA+GGG | - | chr1.4:74947002-74947021 | None:intergenic | 65.0% | |
| CCTCGTGACCTGTTGGGTGC+GGG | + | chr1.4:74947000-74947019 | MS.gene33961:intron | 65.0% | |
| CCTTCACCTTCTCGCCGCTC+TGG | + | chr1.4:74945712-74945731 | MS.gene33961:CDS | 65.0% | |
| CGCAGAGGAGAGGAGAGGAG+AGG | + | chr1.4:74946326-74946345 | MS.gene33961:intron | 65.0% | |
| GATGGGGAGGCCGAGAATCC+AGG | - | chr1.4:74946508-74946527 | None:intergenic | 65.0% | |
| GCACTCCTCTCCCTGCTTCC+TGG | + | chr1.4:74946487-74946506 | MS.gene33961:intron | 65.0% | |
| CCCGCACCCAACAGGTCACG+AGG | - | chr1.4:74947003-74947022 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 74945688 | 74948881 | 74945688 | ID=MS.gene33961 |
| chr1.4 | mRNA | 74945688 | 74948881 | 74945688 | ID=MS.gene33961.t1;Parent=MS.gene33961 |
| chr1.4 | exon | 74945688 | 74945733 | 74945688 | ID=MS.gene33961.t1.exon1;Parent=MS.gene33961.t1 |
| chr1.4 | CDS | 74945688 | 74945733 | 74945688 | ID=cds.MS.gene33961.t1;Parent=MS.gene33961.t1 |
| chr1.4 | exon | 74946058 | 74946128 | 74946058 | ID=MS.gene33961.t1.exon2;Parent=MS.gene33961.t1 |
| chr1.4 | CDS | 74946058 | 74946128 | 74946058 | ID=cds.MS.gene33961.t1;Parent=MS.gene33961.t1 |
| chr1.4 | exon | 74948312 | 74948881 | 74948312 | ID=MS.gene33961.t1.exon3;Parent=MS.gene33961.t1 |
| chr1.4 | CDS | 74948312 | 74948881 | 74948312 | ID=cds.MS.gene33961.t1;Parent=MS.gene33961.t1 |
| Gene Sequence |
| Protein sequence |
