Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36289.t1 | XP_013465529.1 | 88.4 | 507 | 45 | 3 | 1 | 504 | 1 | 496 | 6.70E-158 | 567.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36289.t1 | Q9LJG8 | 46.2 | 93 | 46 | 2 | 283 | 372 | 84 | 175 | 8.9e-18 | 93.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36289.t1 | A0A072VC01 | 88.4 | 507 | 45 | 3 | 1 | 504 | 1 | 496 | 4.8e-158 | 567.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene36289.t1 | TF | Trihelix |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene36289 | 0.835566 | 1.56E-56 | -1.69E-46 |
MS.gene04918 | MS.gene36289 | 0.808232 | 3.43E-50 | -1.69E-46 |
MS.gene04920 | MS.gene36289 | 0.810808 | 9.59E-51 | -1.69E-46 |
MS.gene049254 | MS.gene36289 | 0.808135 | 3.59E-50 | -1.69E-46 |
MS.gene049283 | MS.gene36289 | 0.840779 | 7.08E-58 | -1.69E-46 |
MS.gene049368 | MS.gene36289 | 0.809437 | 1.89E-50 | -1.69E-46 |
MS.gene049499 | MS.gene36289 | 0.830252 | 3.26E-55 | -1.69E-46 |
MS.gene049786 | MS.gene36289 | 0.814699 | 1.35E-51 | -1.69E-46 |
MS.gene049801 | MS.gene36289 | 0.81052 | 1.11E-50 | -1.69E-46 |
MS.gene049983 | MS.gene36289 | 0.874065 | 9.04E-68 | -1.69E-46 |
MS.gene050213 | MS.gene36289 | 0.819211 | 1.31E-52 | -1.69E-46 |
MS.gene050414 | MS.gene36289 | 0.82393 | 1.06E-53 | -1.69E-46 |
MS.gene050551 | MS.gene36289 | 0.829754 | 4.31E-55 | -1.69E-46 |
MS.gene050556 | MS.gene36289 | 0.822503 | 2.29E-53 | -1.69E-46 |
MS.gene050646 | MS.gene36289 | 0.841603 | 4.30E-58 | -1.69E-46 |
MS.gene050654 | MS.gene36289 | 0.88777 | 1.07E-72 | -1.69E-46 |
MS.gene050737 | MS.gene36289 | 0.835643 | 1.49E-56 | -1.69E-46 |
MS.gene050759 | MS.gene36289 | 0.823406 | 1.41E-53 | -1.69E-46 |
MS.gene050941 | MS.gene36289 | 0.847116 | 1.42E-59 | -1.69E-46 |
MS.gene050962 | MS.gene36289 | 0.806716 | 7.19E-50 | -1.69E-46 |
MS.gene051066 | MS.gene36289 | 0.827542 | 1.48E-54 | -1.69E-46 |
MS.gene051198 | MS.gene36289 | 0.850822 | 1.32E-60 | -1.69E-46 |
MS.gene051210 | MS.gene36289 | 0.83054 | 2.77E-55 | -1.69E-46 |
MS.gene051343 | MS.gene36289 | 0.804855 | 1.77E-49 | -1.69E-46 |
MS.gene051490 | MS.gene36289 | 0.800952 | 1.13E-48 | -1.69E-46 |
MS.gene051541 | MS.gene36289 | 0.816568 | 5.17E-52 | -1.69E-46 |
MS.gene051800 | MS.gene36289 | 0.821768 | 3.39E-53 | -1.69E-46 |
MS.gene051852 | MS.gene36289 | 0.817155 | 3.82E-52 | -1.69E-46 |
MS.gene052016 | MS.gene36289 | 0.832333 | 1.00E-55 | -1.69E-46 |
MS.gene052037 | MS.gene36289 | 0.818459 | 1.94E-52 | -1.69E-46 |
MS.gene052118 | MS.gene36289 | 0.835384 | 1.73E-56 | -1.69E-46 |
MS.gene052307 | MS.gene36289 | 0.835552 | 1.57E-56 | -1.69E-46 |
MS.gene052342 | MS.gene36289 | 0.852956 | 3.28E-61 | -1.69E-46 |
MS.gene052434 | MS.gene36289 | 0.814104 | 1.83E-51 | -1.69E-46 |
MS.gene052463 | MS.gene36289 | 0.859484 | 4.01E-63 | -1.69E-46 |
MS.gene052516 | MS.gene36289 | 0.804952 | 1.69E-49 | -1.69E-46 |
MS.gene052609 | MS.gene36289 | 0.820466 | 6.76E-53 | -1.69E-46 |
MS.gene052674 | MS.gene36289 | 0.8002 | 1.61E-48 | -1.69E-46 |
MS.gene052677 | MS.gene36289 | 0.804701 | 1.90E-49 | -1.69E-46 |
MS.gene052775 | MS.gene36289 | 0.801708 | 7.93E-49 | -1.69E-46 |
MS.gene052776 | MS.gene36289 | 0.807363 | 5.24E-50 | -1.69E-46 |
MS.gene053079 | MS.gene36289 | 0.853035 | 3.12E-61 | -1.69E-46 |
MS.gene053726 | MS.gene36289 | 0.809378 | 1.95E-50 | -1.69E-46 |
MS.gene054178 | MS.gene36289 | 0.803948 | 2.73E-49 | -1.69E-46 |
MS.gene054479 | MS.gene36289 | 0.823565 | 1.29E-53 | -1.69E-46 |
MS.gene054576 | MS.gene36289 | 0.804716 | 1.89E-49 | -1.69E-46 |
MS.gene05458 | MS.gene36289 | 0.848224 | 7.02E-60 | -1.69E-46 |
MS.gene054641 | MS.gene36289 | 0.840613 | 7.83E-58 | -1.69E-46 |
MS.gene054651 | MS.gene36289 | 0.80733 | 5.33E-50 | -1.69E-46 |
MS.gene054824 | MS.gene36289 | 0.800506 | 1.40E-48 | -1.69E-46 |
MS.gene054892 | MS.gene36289 | 0.822112 | 2.82E-53 | -1.69E-46 |
MS.gene054893 | MS.gene36289 | 0.820508 | 6.61E-53 | -1.69E-46 |
MS.gene055327 | MS.gene36289 | 0.833079 | 6.55E-56 | -1.69E-46 |
MS.gene055469 | MS.gene36289 | 0.811001 | 8.71E-51 | -1.69E-46 |
MS.gene055513 | MS.gene36289 | 0.858487 | 7.96E-63 | -1.69E-46 |
MS.gene05552 | MS.gene36289 | 0.803709 | 3.06E-49 | -1.69E-46 |
MS.gene055864 | MS.gene36289 | 0.819615 | 1.06E-52 | -1.69E-46 |
MS.gene055926 | MS.gene36289 | 0.82567 | 4.13E-54 | -1.69E-46 |
MS.gene056045 | MS.gene36289 | 0.835677 | 1.46E-56 | -1.69E-46 |
MS.gene056181 | MS.gene36289 | 0.837293 | 5.66E-57 | -1.69E-46 |
MS.gene056308 | MS.gene36289 | 0.851301 | 9.70E-61 | -1.69E-46 |
MS.gene056390 | MS.gene36289 | 0.812862 | 3.42E-51 | -1.69E-46 |
MS.gene056507 | MS.gene36289 | 0.824456 | 7.99E-54 | -1.69E-46 |
MS.gene056699 | MS.gene36289 | 0.802438 | 5.61E-49 | -1.69E-46 |
MS.gene056776 | MS.gene36289 | 0.830674 | 2.57E-55 | -1.69E-46 |
MS.gene056831 | MS.gene36289 | 0.848094 | 7.63E-60 | -1.69E-46 |
MS.gene05686 | MS.gene36289 | 0.805113 | 1.56E-49 | -1.69E-46 |
MS.gene056973 | MS.gene36289 | 0.846612 | 1.95E-59 | -1.69E-46 |
MS.gene057034 | MS.gene36289 | 0.808194 | 3.49E-50 | -1.69E-46 |
MS.gene057102 | MS.gene36289 | 0.805334 | 1.40E-49 | -1.69E-46 |
MS.gene057890 | MS.gene36289 | -0.82581 | 3.83E-54 | -1.69E-46 |
MS.gene057893 | MS.gene36289 | -0.812178 | 4.83E-51 | -1.69E-46 |
MS.gene057915 | MS.gene36289 | 0.801514 | 8.69E-49 | -1.69E-46 |
MS.gene057919 | MS.gene36289 | 0.853773 | 1.91E-61 | -1.69E-46 |
MS.gene058081 | MS.gene36289 | 0.819007 | 1.46E-52 | -1.69E-46 |
MS.gene058289 | MS.gene36289 | 0.801559 | 8.50E-49 | -1.69E-46 |
MS.gene058292 | MS.gene36289 | 0.808201 | 3.48E-50 | -1.69E-46 |
MS.gene058330 | MS.gene36289 | 0.819829 | 9.46E-53 | -1.69E-46 |
MS.gene058429 | MS.gene36289 | 0.849431 | 3.25E-60 | -1.69E-46 |
MS.gene058638 | MS.gene36289 | 0.803238 | 3.84E-49 | -1.69E-46 |
MS.gene058639 | MS.gene36289 | 0.810722 | 1.00E-50 | -1.69E-46 |
MS.gene058647 | MS.gene36289 | 0.808757 | 2.65E-50 | -1.69E-46 |
MS.gene058781 | MS.gene36289 | 0.806589 | 7.64E-50 | -1.69E-46 |
MS.gene05897 | MS.gene36289 | 0.803831 | 2.89E-49 | -1.69E-46 |
MS.gene059170 | MS.gene36289 | 0.865035 | 7.91E-65 | -1.69E-46 |
MS.gene059224 | MS.gene36289 | 0.814011 | 1.91E-51 | -1.69E-46 |
MS.gene059283 | MS.gene36289 | 0.809795 | 1.59E-50 | -1.69E-46 |
MS.gene059439 | MS.gene36289 | 0.803165 | 3.97E-49 | -1.69E-46 |
MS.gene059570 | MS.gene36289 | 0.803162 | 3.98E-49 | -1.69E-46 |
MS.gene059842 | MS.gene36289 | 0.807068 | 6.06E-50 | -1.69E-46 |
MS.gene059965 | MS.gene36289 | 0.808315 | 3.29E-50 | -1.69E-46 |
MS.gene06010 | MS.gene36289 | 0.815083 | 1.11E-51 | -1.69E-46 |
MS.gene060259 | MS.gene36289 | 0.806103 | 9.68E-50 | -1.69E-46 |
MS.gene060296 | MS.gene36289 | 0.821951 | 3.07E-53 | -1.69E-46 |
MS.gene060435 | MS.gene36289 | 0.854953 | 8.73E-62 | -1.69E-46 |
MS.gene060520 | MS.gene36289 | 0.820036 | 8.48E-53 | -1.69E-46 |
MS.gene060527 | MS.gene36289 | 0.818627 | 1.78E-52 | -1.69E-46 |
MS.gene06052 | MS.gene36289 | 0.857882 | 1.21E-62 | -1.69E-46 |
MS.gene060637 | MS.gene36289 | 0.821485 | 3.94E-53 | -1.69E-46 |
MS.gene060777 | MS.gene36289 | 0.819986 | 8.70E-53 | -1.69E-46 |
MS.gene060785 | MS.gene36289 | 0.809874 | 1.52E-50 | -1.69E-46 |
MS.gene060932 | MS.gene36289 | 0.870292 | 1.63E-66 | -1.69E-46 |
MS.gene060933 | MS.gene36289 | 0.845491 | 3.93E-59 | -1.69E-46 |
MS.gene060935 | MS.gene36289 | 0.828144 | 1.06E-54 | -1.69E-46 |
MS.gene060937 | MS.gene36289 | 0.85107 | 1.13E-60 | -1.69E-46 |
MS.gene061006 | MS.gene36289 | 0.806464 | 8.12E-50 | -1.69E-46 |
MS.gene061100 | MS.gene36289 | 0.860941 | 1.45E-63 | -1.69E-46 |
MS.gene06121 | MS.gene36289 | 0.838575 | 2.65E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36289.t1 | MTR_2g102227 | 86.117 | 497 | 55 | 3 | 11 | 504 | 11 | 496 | 0.0 | 721 |
MS.gene36289.t1 | MTR_6g486270 | 52.252 | 222 | 101 | 3 | 282 | 500 | 129 | 348 | 1.82e-60 | 203 |
MS.gene36289.t1 | MTR_8g022290 | 28.339 | 307 | 143 | 10 | 262 | 500 | 37 | 334 | 5.53e-20 | 92.0 |
MS.gene36289.t1 | MTR_4g079960 | 43.617 | 94 | 47 | 2 | 283 | 370 | 31 | 124 | 8.58e-16 | 78.6 |
MS.gene36289.t1 | MTR_4g079960 | 43.617 | 94 | 47 | 2 | 283 | 370 | 31 | 124 | 1.04e-15 | 78.6 |
MS.gene36289.t1 | MTR_4g079960 | 43.617 | 94 | 47 | 2 | 283 | 370 | 31 | 124 | 1.67e-15 | 77.8 |
MS.gene36289.t1 | MTR_2g016140 | 39.785 | 93 | 51 | 2 | 283 | 370 | 23 | 115 | 3.03e-15 | 77.0 |
MS.gene36289.t1 | MTR_2g016140 | 39.785 | 93 | 51 | 2 | 283 | 370 | 23 | 115 | 5.19e-15 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36289.t1 | AT3G24490 | 42.912 | 261 | 129 | 4 | 245 | 504 | 65 | 306 | 4.49e-59 | 198 |
MS.gene36289.t1 | AT3G14180 | 42.857 | 105 | 53 | 3 | 283 | 384 | 84 | 184 | 3.21e-22 | 99.8 |
MS.gene36289.t1 | AT1G54060 | 32.031 | 256 | 130 | 8 | 283 | 496 | 94 | 347 | 8.71e-19 | 88.6 |
MS.gene36289.t1 | AT3G11100 | 32.569 | 218 | 137 | 3 | 283 | 496 | 22 | 233 | 1.17e-17 | 83.2 |
MS.gene36289.t1 | AT5G05550 | 30.837 | 227 | 136 | 6 | 283 | 502 | 24 | 236 | 8.61e-16 | 77.4 |
MS.gene36289.t1 | AT5G05550 | 30.837 | 227 | 136 | 6 | 283 | 502 | 24 | 236 | 1.22e-15 | 77.0 |
MS.gene36289.t1 | AT3G58630 | 37.255 | 102 | 50 | 2 | 283 | 370 | 26 | 127 | 1.78e-15 | 77.8 |
MS.gene36289.t1 | AT5G05550 | 30.837 | 227 | 136 | 6 | 283 | 502 | 24 | 236 | 1.83e-15 | 76.6 |
MS.gene36289.t1 | AT3G58630 | 37.255 | 102 | 50 | 2 | 283 | 370 | 26 | 127 | 2.14e-15 | 77.8 |
MS.gene36289.t1 | AT3G10030 | 35.556 | 90 | 57 | 1 | 282 | 370 | 160 | 249 | 1.72e-13 | 73.2 |
MS.gene36289.t1 | AT3G10030 | 35.556 | 90 | 57 | 1 | 282 | 370 | 160 | 249 | 2.36e-13 | 72.8 |
MS.gene36289.t1 | AT3G24860 | 29.921 | 127 | 79 | 3 | 266 | 386 | 48 | 170 | 1.22e-11 | 66.2 |
Find 129 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGATTCCATTCAGAATTT+TGG | 0.118439 | 2.2:+1678028 | MS.gene36289:CDS |
CGTCTTCATCCACCTGCTTT+AGG | 0.171389 | 2.2:-1677028 | None:intergenic |
CTTCTTCATCAGCATGCTTT+AGG | 0.195850 | 2.2:-1677253 | None:intergenic |
CAAGATTAAGTTTCAAGATA+TGG | 0.238032 | 2.2:+1677730 | MS.gene36289:CDS |
TTCCCAAATGGCTGGGAATA+TGG | 0.258167 | 2.2:-1677131 | None:intergenic |
TTCTTCATCAGCATGCTTTA+GGG | 0.275731 | 2.2:-1677252 | None:intergenic |
GCAGCTGCTAAACGATCTTT+TGG | 0.284124 | 2.2:+1677494 | MS.gene36289:CDS |
GTCTTCATCCACCTGCTTTA+GGG | 0.285453 | 2.2:-1677027 | None:intergenic |
TGGGTGGTGGAGATAGAAAA+TGG | 0.290828 | 2.2:+1677750 | MS.gene36289:CDS |
CATTTGTTCTTCTTGATGCT+TGG | 0.296454 | 2.2:+1677555 | MS.gene36289:CDS |
TCGCCATACCCTTGATTGTT+AGG | 0.308295 | 2.2:-1676756 | None:intergenic |
ATTTGTTCTTCTTGATGCTT+GGG | 0.319429 | 2.2:+1677556 | MS.gene36289:CDS |
AGAAGATTGAAAATAATAAA+AGG | 0.319723 | 2.2:+1678062 | MS.gene36289:CDS |
ACAGAATCGGTTCGTGTAGA+AGG | 0.331232 | 2.2:+1677932 | MS.gene36289:CDS |
TCTCCATATTCCCAGCCATT+TGG | 0.360453 | 2.2:+1677128 | MS.gene36289:CDS |
GATGGATTTCCTCAACGATT+TGG | 0.369450 | 2.2:+1678114 | MS.gene36289:CDS |
CTCCATATTCCCAGCCATTT+GGG | 0.375943 | 2.2:+1677129 | MS.gene36289:CDS |
AGAAGATGAAGAGCGGTTAG+TGG | 0.381730 | 2.2:+1677178 | MS.gene36289:CDS |
ACCAACACCATATGGGTTAG+AGG | 0.383815 | 2.2:-1676730 | None:intergenic |
TTCTTGATGCTTGGGGTGAT+CGG | 0.409344 | 2.2:+1677564 | MS.gene36289:CDS |
TTAGGATAACCAACACCATA+TGG | 0.412870 | 2.2:-1676738 | None:intergenic |
TACCTTCATTCCCAAATGGC+TGG | 0.417617 | 2.2:-1677139 | None:intergenic |
GACCGACAAAGCGAGGAATA+TGG | 0.421493 | 2.2:+1677080 | MS.gene36289:CDS |
ATCGGTTTCTGCAACATAGA+AGG | 0.423435 | 2.2:+1677582 | MS.gene36289:CDS |
AAGATTAAGTTTCAAGATAT+GGG | 0.423794 | 2.2:+1677731 | MS.gene36289:CDS |
AACTTATGAATTTGCAGCTC+GGG | 0.427130 | 2.2:+1677454 | MS.gene36289:CDS |
TCCCAGCCATTTGGGAATGA+AGG | 0.432109 | 2.2:+1677137 | MS.gene36289:CDS |
AACCATATTCCTCGCTTTGT+CGG | 0.453074 | 2.2:-1677082 | None:intergenic |
ATGGCAACAAGTTGCAGAAA+AGG | 0.453580 | 2.2:+1677625 | MS.gene36289:CDS |
TAATAAAAGGCAGCAGATGA+TGG | 0.461717 | 2.2:+1678075 | MS.gene36289:CDS |
GCGATCTCAAACACCCTTTG+AGG | 0.462774 | 2.2:+1676775 | MS.gene36289:CDS |
GTTTCAAAAGTTGAAAGAAC+GGG | 0.463936 | 2.2:+1677656 | MS.gene36289:CDS |
GGGTGGTGGAGATAGAAAAT+GGG | 0.465027 | 2.2:+1677751 | MS.gene36289:CDS |
AAGAAAAGAAGGAGAGGAAG+GGG | 0.472304 | 2.2:+1677974 | MS.gene36289:CDS |
GTTGGTTATCCTAACAATCA+AGG | 0.472688 | 2.2:+1676747 | MS.gene36289:CDS |
AAAATGTTGACGACGAGGAT+GGG | 0.474465 | 2.2:+1677306 | MS.gene36289:CDS |
CATCACCGTTCCCTCCTAAC+CGG | 0.475969 | 2.2:-1676932 | None:intergenic |
TTGACGACGAGGATGGGGAT+AGG | 0.478859 | 2.2:+1677312 | MS.gene36289:CDS |
CCTTCTCAGTCCATTCAGTA+AGG | 0.479775 | 2.2:-1677529 | None:intergenic |
GCAGCTGCAGCTGACGGTGT+TGG | 0.482446 | 2.2:-1677479 | None:intergenic |
TTAGGAATTCCCTTACTGAA+TGG | 0.483595 | 2.2:+1677519 | MS.gene36289:CDS |
TTGTTACCTTCATTCCCAAA+TGG | 0.485652 | 2.2:-1677143 | None:intergenic |
CATCATCATTCCCTCCTATC+CGG | 0.487334 | 2.2:-1676971 | None:intergenic |
GGAATCAGCAAGTAATTTGA+AGG | 0.488399 | 2.2:-1678014 | None:intergenic |
GCAATGACGAGGATGGGGAT+AGG | 0.488482 | 2.2:+1677279 | MS.gene36289:CDS |
CGGGTAGATTCATTTGCAGC+TGG | 0.491062 | 2.2:-1676816 | None:intergenic |
CAAAGAAAAGAAGGAGAGGA+AGG | 0.491377 | 2.2:+1677972 | MS.gene36289:CDS |
TAATTCATCTTCATTCATCA+TGG | 0.493258 | 2.2:-1677390 | None:intergenic |
CAATGACGAGGATGGGGATA+GGG | 0.494589 | 2.2:+1677280 | MS.gene36289:CDS |
CATCGACATGATCATAATCT+CGG | 0.496049 | 2.2:-1676836 | None:intergenic |
TATCTTACCAAAATTCTGAA+TGG | 0.497261 | 2.2:-1678035 | None:intergenic |
TAGATTCATTTGCAGCTGGA+TGG | 0.497620 | 2.2:-1676812 | None:intergenic |
ACCTTCATTCCCAAATGGCT+GGG | 0.497851 | 2.2:-1677138 | None:intergenic |
TCCTCCTGAAAATACAGAAT+CGG | 0.498451 | 2.2:+1677919 | MS.gene36289:CDS |
AGGTATCCCTCTAACCCATA+TGG | 0.502976 | 2.2:+1676723 | MS.gene36289:CDS |
GCATGATTTACATAAACTCC+AGG | 0.504047 | 2.2:-1677869 | None:intergenic |
AGATTCATTTGCAGCTGGAT+GGG | 0.504646 | 2.2:-1676811 | None:intergenic |
GAAAATGTTGACGACGAGGA+TGG | 0.512898 | 2.2:+1677305 | MS.gene36289:CDS |
AAGATAGCAATGACGAGGAT+GGG | 0.513429 | 2.2:+1677273 | MS.gene36289:CDS |
GAAGATAGCAATGACGAGGA+TGG | 0.518876 | 2.2:+1677272 | MS.gene36289:CDS |
GGCCTTGCCCAAAGAAAAGA+AGG | 0.520654 | 2.2:+1677963 | MS.gene36289:CDS |
GACGATGAAGATCGGTTAGG+AGG | 0.521555 | 2.2:+1676882 | MS.gene36289:CDS |
TGACGACGAGGATGGGGATA+GGG | 0.523050 | 2.2:+1677313 | MS.gene36289:CDS |
AATATGAAGAATTCCTCAAA+GGG | 0.523799 | 2.2:-1676788 | None:intergenic |
AAGTTTCAAGATATGGGTGG+TGG | 0.524195 | 2.2:+1677737 | MS.gene36289:CDS |
TAGGATAACCAACACCATAT+GGG | 0.528470 | 2.2:-1676737 | None:intergenic |
CCCTCTAACCCATATGGTGT+TGG | 0.531952 | 2.2:+1676729 | MS.gene36289:CDS |
TATCCTAACAATCAAGGGTA+TGG | 0.537427 | 2.2:+1676753 | MS.gene36289:CDS |
AAAGAAAAGAAGGAGAGGAA+GGG | 0.537660 | 2.2:+1677973 | MS.gene36289:CDS |
GGAACTAGAAAAGATGAGGA+TGG | 0.544427 | 2.2:+1678096 | MS.gene36289:CDS |
AGATGAAGAGCGGTTAGTGG+AGG | 0.544899 | 2.2:+1677181 | MS.gene36289:CDS |
CGGTGATAATGACAATAAGC+AGG | 0.547701 | 2.2:+1677358 | MS.gene36289:CDS |
AAATGTTGACGACGAGGATG+GGG | 0.548278 | 2.2:+1677307 | MS.gene36289:CDS |
GGGAGTCTTGCTTGTTGTGG+TGG | 0.550724 | 2.2:-1677809 | None:intergenic |
GTCGATGATGAAGATCAGTT+AGG | 0.550883 | 2.2:+1676852 | MS.gene36289:CDS |
GTTGATGAAGACCGGTTAGG+AGG | 0.553914 | 2.2:+1676921 | MS.gene36289:CDS |
TTTGTTCTTCTTGATGCTTG+GGG | 0.554775 | 2.2:+1677557 | MS.gene36289:CDS |
GTTCGTGTAGAAGGTTTCGA+AGG | 0.557020 | 2.2:+1677941 | MS.gene36289:CDS |
AGATAGCAATGACGAGGATG+GGG | 0.557142 | 2.2:+1677274 | MS.gene36289:CDS |
ATCGACATGATCATAATCTC+GGG | 0.559195 | 2.2:-1676835 | None:intergenic |
GTTGATGAAGACCGGATAGG+AGG | 0.559685 | 2.2:+1676960 | MS.gene36289:CDS |
CCAACACCATATGGGTTAGA+GGG | 0.561593 | 2.2:-1676729 | None:intergenic |
CGTTTAGCAGCTGCAGCTGA+CGG | 0.562335 | 2.2:-1677485 | None:intergenic |
ATGATGTTGTTGATGAAGAC+CGG | 0.562727 | 2.2:+1676913 | MS.gene36289:CDS |
TGATCATCATTCCCTAAAGC+AGG | 0.566741 | 2.2:+1677016 | MS.gene36289:CDS |
GATGATGAAGATCAGTTAGG+AGG | 0.571101 | 2.2:+1676855 | MS.gene36289:CDS |
GGTTTCAAAAGTTGAAAGAA+CGG | 0.571460 | 2.2:+1677655 | MS.gene36289:CDS |
AATGACGATGAAGATCGGTT+AGG | 0.571987 | 2.2:+1676879 | MS.gene36289:CDS |
AGGATGAAGAAGATGAAGAG+CGG | 0.572202 | 2.2:+1677171 | MS.gene36289:CDS |
GTTGTTGATGAAGACCGGTT+AGG | 0.573185 | 2.2:+1676918 | MS.gene36289:CDS |
TGTAAATCATGCAAATGAGA+TGG | 0.574988 | 2.2:+1677880 | MS.gene36289:CDS |
TCTCTTGAGTTCGAACGACA+AGG | 0.575445 | 2.2:-1677830 | None:intergenic |
ATGAAGACGATGACACCGAT+GGG | 0.578930 | 2.2:+1677042 | MS.gene36289:CDS |
GATGAAGACGATGACACCGA+TGG | 0.583172 | 2.2:+1677041 | MS.gene36289:CDS |
ATGATGTTGTTGATGAAGAC+CGG | 0.583247 | 2.2:+1676952 | MS.gene36289:CDS |
AAGGAAGAGTCTTCGATCTG+AGG | 0.584495 | 2.2:+1677601 | MS.gene36289:CDS |
GAATATGAAGAATTCCTCAA+AGG | 0.587878 | 2.2:-1676789 | None:intergenic |
CAACTTATGAATTTGCAGCT+CGG | 0.587886 | 2.2:+1677453 | MS.gene36289:CDS |
CAAGGGAGTCTTGCTTGTTG+TGG | 0.589582 | 2.2:-1677812 | None:intergenic |
CTTCTCAGTCCATTCAGTAA+GGG | 0.589672 | 2.2:-1677528 | None:intergenic |
AGAGTCTTCGATCTGAGGAA+TGG | 0.593143 | 2.2:+1677606 | MS.gene36289:CDS |
GAGGGAATGACGATGAAGAT+CGG | 0.593801 | 2.2:+1676874 | MS.gene36289:CDS |
AGTTGCAGAAAAGGTATCAG+TGG | 0.596635 | 2.2:+1677634 | MS.gene36289:CDS |
TTCGTGTAGAAGGTTTCGAA+GGG | 0.597829 | 2.2:+1677942 | MS.gene36289:CDS |
TTGATGAAGACCGGATAGGA+GGG | 0.598250 | 2.2:+1676961 | MS.gene36289:CDS |
ACGATGAAGATCGGTTAGGA+GGG | 0.600690 | 2.2:+1676883 | MS.gene36289:CDS |
GAAGACCGGTTAGGAGGGAA+CGG | 0.600818 | 2.2:+1676927 | MS.gene36289:CDS |
TTGGTTATCCTAACAATCAA+GGG | 0.603345 | 2.2:+1676748 | MS.gene36289:CDS |
CCTTACTGAATGGACTGAGA+AGG | 0.603468 | 2.2:+1677529 | MS.gene36289:CDS |
ATGATGAAGATCAGTTAGGA+GGG | 0.607333 | 2.2:+1676856 | MS.gene36289:CDS |
TGCCCAAAGAAAAGAAGGAG+AGG | 0.607703 | 2.2:+1677968 | MS.gene36289:CDS |
CTCTTGAGTTCGAACGACAA+GGG | 0.610632 | 2.2:-1677829 | None:intergenic |
TTGATGAAGACCGGTTAGGA+GGG | 0.615039 | 2.2:+1676922 | MS.gene36289:CDS |
TGATGGAACTAGAAAAGATG+AGG | 0.616160 | 2.2:+1678092 | MS.gene36289:CDS |
AAATGAGATGGATGACATGA+AGG | 0.616691 | 2.2:+1677892 | MS.gene36289:CDS |
TCATCATTCCCTAAAGCAGG+TGG | 0.639405 | 2.2:+1677019 | MS.gene36289:CDS |
ATTAAGTTTCAAGATATGGG+TGG | 0.645987 | 2.2:+1677734 | MS.gene36289:CDS |
TGACAATGACCGACAAAGCG+AGG | 0.648844 | 2.2:+1677073 | MS.gene36289:CDS |
TTTGTGCTTCCAAATCGTTG+AGG | 0.661381 | 2.2:-1678123 | None:intergenic |
GAATGAAGGTAACAATGATG+AGG | 0.691606 | 2.2:+1677151 | MS.gene36289:CDS |
GTTGTTGATGAAGACCGGAT+AGG | 0.693675 | 2.2:+1676957 | MS.gene36289:CDS |
GAAGACGATGACACCGATGG+GGG | 0.696635 | 2.2:+1677044 | MS.gene36289:CDS |
TGAAGAAGATAGCAATGACG+AGG | 0.697416 | 2.2:+1677268 | MS.gene36289:CDS |
GAAAATGTTGATGACAATGA+CGG | 0.700114 | 2.2:+1677338 | MS.gene36289:CDS |
TTGATGATGATGCAATTGCA+AGG | 0.701591 | 2.2:+1676703 | MS.gene36289:CDS |
GTTATCTGAAACATTCTGTG+AGG | 0.703353 | 2.2:+1677102 | MS.gene36289:CDS |
GGATGAAAATGTTGACGACG+AGG | 0.709102 | 2.2:+1677301 | MS.gene36289:CDS |
TGAAGACGATGACACCGATG+GGG | 0.719428 | 2.2:+1677043 | MS.gene36289:CDS |
TGAATGAAGATGAATTAGAG+TGG | 0.724734 | 2.2:+1677396 | MS.gene36289:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAGATTGAAAATAATAAA+AGG | + | chr2.2:1678062-1678081 | MS.gene36289:CDS | 15.0% |
!! | ATTGAAGAAAAAATACAAAA+AGG | + | chr2.2:1677706-1677725 | MS.gene36289:CDS | 15.0% |
!! | AAGATTAAGTTTCAAGATAT+GGG | + | chr2.2:1677731-1677750 | MS.gene36289:CDS | 20.0% |
! | AATATGAAGAATTCCTCAAA+GGG | - | chr2.2:1676791-1676810 | None:intergenic | 25.0% |
! | CAAGATTAAGTTTCAAGATA+TGG | + | chr2.2:1677730-1677749 | MS.gene36289:CDS | 25.0% |
! | TAATTCATCTTCATTCATCA+TGG | - | chr2.2:1677393-1677412 | None:intergenic | 25.0% |
! | TATCTTACCAAAATTCTGAA+TGG | - | chr2.2:1678038-1678057 | None:intergenic | 25.0% |
!!! | ATGGGTTTATTTTCAAAAGA+TGG | + | chr2.2:1677769-1677788 | MS.gene36289:CDS | 25.0% |
!!! | TCTTTAGCTTTTGCTTTTTT+GGG | - | chr2.2:1677424-1677443 | None:intergenic | 25.0% |
ATTAAGTTTCAAGATATGGG+TGG | + | chr2.2:1677734-1677753 | MS.gene36289:CDS | 30.0% | |
ATTTGTTCTTCTTGATGCTT+GGG | + | chr2.2:1677556-1677575 | MS.gene36289:CDS | 30.0% | |
GAATATGAAGAATTCCTCAA+AGG | - | chr2.2:1676792-1676811 | None:intergenic | 30.0% | |
GGTTTCAAAAGTTGAAAGAA+CGG | + | chr2.2:1677655-1677674 | MS.gene36289:CDS | 30.0% | |
GTTTCAAAAGTTGAAAGAAC+GGG | + | chr2.2:1677656-1677675 | MS.gene36289:CDS | 30.0% | |
TGAATGAAGATGAATTAGAG+TGG | + | chr2.2:1677396-1677415 | MS.gene36289:CDS | 30.0% | |
TGTAAATCATGCAAATGAGA+TGG | + | chr2.2:1677880-1677899 | MS.gene36289:CDS | 30.0% | |
TTGGTTATCCTAACAATCAA+GGG | + | chr2.2:1676748-1676767 | MS.gene36289:CDS | 30.0% | |
!! | GAAAATGTTGATGACAATGA+CGG | + | chr2.2:1677338-1677357 | MS.gene36289:CDS | 30.0% |
!!! | CTCTTTAGCTTTTGCTTTTT+TGG | - | chr2.2:1677425-1677444 | None:intergenic | 30.0% |
AAAGAAAAGAAGGAGAGGAA+GGG | + | chr2.2:1677973-1677992 | MS.gene36289:CDS | 35.0% | |
AAATGAGATGGATGACATGA+AGG | + | chr2.2:1677892-1677911 | MS.gene36289:CDS | 35.0% | |
AACTTATGAATTTGCAGCTC+GGG | + | chr2.2:1677454-1677473 | MS.gene36289:CDS | 35.0% | |
ATCGACATGATCATAATCTC+GGG | - | chr2.2:1676838-1676857 | None:intergenic | 35.0% | |
ATGATGAAGATCAGTTAGGA+GGG | + | chr2.2:1676856-1676875 | MS.gene36289:CDS | 35.0% | |
CAACTTATGAATTTGCAGCT+CGG | + | chr2.2:1677453-1677472 | MS.gene36289:CDS | 35.0% | |
CATCGACATGATCATAATCT+CGG | - | chr2.2:1676839-1676858 | None:intergenic | 35.0% | |
CATTTGTTCTTCTTGATGCT+TGG | + | chr2.2:1677555-1677574 | MS.gene36289:CDS | 35.0% | |
GAATGAAGGTAACAATGATG+AGG | + | chr2.2:1677151-1677170 | MS.gene36289:CDS | 35.0% | |
GCATGATTTACATAAACTCC+AGG | - | chr2.2:1677872-1677891 | None:intergenic | 35.0% | |
GGAATCAGCAAGTAATTTGA+AGG | - | chr2.2:1678017-1678036 | None:intergenic | 35.0% | |
GTTGGTTATCCTAACAATCA+AGG | + | chr2.2:1676747-1676766 | MS.gene36289:CDS | 35.0% | |
TAATAAAAGGCAGCAGATGA+TGG | + | chr2.2:1678075-1678094 | MS.gene36289:CDS | 35.0% | |
TAGGATAACCAACACCATAT+GGG | - | chr2.2:1676740-1676759 | None:intergenic | 35.0% | |
TATCCTAACAATCAAGGGTA+TGG | + | chr2.2:1676753-1676772 | MS.gene36289:CDS | 35.0% | |
TCCTCCTGAAAATACAGAAT+CGG | + | chr2.2:1677919-1677938 | MS.gene36289:CDS | 35.0% | |
TGATGGAACTAGAAAAGATG+AGG | + | chr2.2:1678092-1678111 | MS.gene36289:CDS | 35.0% | |
TTAGGAATTCCCTTACTGAA+TGG | + | chr2.2:1677519-1677538 | MS.gene36289:CDS | 35.0% | |
TTAGGATAACCAACACCATA+TGG | - | chr2.2:1676741-1676760 | None:intergenic | 35.0% | |
TTCTTCATCAGCATGCTTTA+GGG | - | chr2.2:1677255-1677274 | None:intergenic | 35.0% | |
TTGTTACCTTCATTCCCAAA+TGG | - | chr2.2:1677146-1677165 | None:intergenic | 35.0% | |
TTTGTTCTTCTTGATGCTTG+GGG | + | chr2.2:1677557-1677576 | MS.gene36289:CDS | 35.0% | |
! | ATGATGTTGTTGATGAAGAC+CGG | + | chr2.2:1676913-1676932 | MS.gene36289:CDS | 35.0% |
! | GTTATCTGAAACATTCTGTG+AGG | + | chr2.2:1677102-1677121 | MS.gene36289:CDS | 35.0% |
! | TTCCTCTCCTTCTTTTCTTT+GGG | - | chr2.2:1677973-1677992 | None:intergenic | 35.0% |
!! | GAGCATATTTTTATGAAGCC+TGG | + | chr2.2:1677851-1677870 | MS.gene36289:CDS | 35.0% |
!! | GCTGATTCCATTCAGAATTT+TGG | + | chr2.2:1678028-1678047 | MS.gene36289:CDS | 35.0% |
!! | TTGATGATGATGCAATTGCA+AGG | + | chr2.2:1676703-1676722 | MS.gene36289:CDS | 35.0% |
AAAATGTTGACGACGAGGAT+GGG | + | chr2.2:1677306-1677325 | MS.gene36289:CDS | 40.0% | |
AACCATATTCCTCGCTTTGT+CGG | - | chr2.2:1677085-1677104 | None:intergenic | 40.0% | |
AAGAAAAGAAGGAGAGGAAG+GGG | + | chr2.2:1677974-1677993 | MS.gene36289:CDS | 40.0% | |
AAGATAGCAATGACGAGGAT+GGG | + | chr2.2:1677273-1677292 | MS.gene36289:CDS | 40.0% | |
AAGTTTCAAGATATGGGTGG+TGG | + | chr2.2:1677737-1677756 | MS.gene36289:CDS | 40.0% | |
AATGACGATGAAGATCGGTT+AGG | + | chr2.2:1676879-1676898 | MS.gene36289:CDS | 40.0% | |
AGATTCATTTGCAGCTGGAT+GGG | - | chr2.2:1676814-1676833 | None:intergenic | 40.0% | |
AGGATGAAGAAGATGAAGAG+CGG | + | chr2.2:1677171-1677190 | MS.gene36289:CDS | 40.0% | |
ATGGCAACAAGTTGCAGAAA+AGG | + | chr2.2:1677625-1677644 | MS.gene36289:CDS | 40.0% | |
CAAAGAAAAGAAGGAGAGGA+AGG | + | chr2.2:1677972-1677991 | MS.gene36289:CDS | 40.0% | |
CTTCTCAGTCCATTCAGTAA+GGG | - | chr2.2:1677531-1677550 | None:intergenic | 40.0% | |
CTTCTTCATCAGCATGCTTT+AGG | - | chr2.2:1677256-1677275 | None:intergenic | 40.0% | |
GATGATGAAGATCAGTTAGG+AGG | + | chr2.2:1676855-1676874 | MS.gene36289:CDS | 40.0% | |
GGAACTAGAAAAGATGAGGA+TGG | + | chr2.2:1678096-1678115 | MS.gene36289:CDS | 40.0% | |
GTCGATGATGAAGATCAGTT+AGG | + | chr2.2:1676852-1676871 | MS.gene36289:CDS | 40.0% | |
TAGATTCATTTGCAGCTGGA+TGG | - | chr2.2:1676815-1676834 | None:intergenic | 40.0% | |
TGAAGAAGATAGCAATGACG+AGG | + | chr2.2:1677268-1677287 | MS.gene36289:CDS | 40.0% | |
TGATCATCATTCCCTAAAGC+AGG | + | chr2.2:1677016-1677035 | MS.gene36289:CDS | 40.0% | |
TTCGTGTAGAAGGTTTCGAA+GGG | + | chr2.2:1677942-1677961 | MS.gene36289:CDS | 40.0% | |
TTTGTGCTTCCAAATCGTTG+AGG | - | chr2.2:1678126-1678145 | None:intergenic | 40.0% | |
! | AGCTGCTAAACGATCTTTTG+GGG | + | chr2.2:1677496-1677515 | MS.gene36289:CDS | 40.0% |
! | ATCGGTTTCTGCAACATAGA+AGG | + | chr2.2:1677582-1677601 | MS.gene36289:CDS | 40.0% |
! | CAGCTGCTAAACGATCTTTT+GGG | + | chr2.2:1677495-1677514 | MS.gene36289:CDS | 40.0% |
! | CGGTGATAATGACAATAAGC+AGG | + | chr2.2:1677358-1677377 | MS.gene36289:CDS | 40.0% |
! | CTTCCTCTCCTTCTTTTCTT+TGG | - | chr2.2:1677974-1677993 | None:intergenic | 40.0% |
! | GATGGATTTCCTCAACGATT+TGG | + | chr2.2:1678114-1678133 | MS.gene36289:CDS | 40.0% |
!! | ACCGATTCTGTATTTTCAGG+AGG | - | chr2.2:1677923-1677942 | None:intergenic | 40.0% |
!! | AGTTGCAGAAAAGGTATCAG+TGG | + | chr2.2:1677634-1677653 | MS.gene36289:CDS | 40.0% |
!! | CGAACCGATTCTGTATTTTC+AGG | - | chr2.2:1677926-1677945 | None:intergenic | 40.0% |
!!! | CTAAACGATCTTTTGGGGTT+AGG | + | chr2.2:1677501-1677520 | MS.gene36289:CDS | 40.0% |
AAATGTTGACGACGAGGATG+GGG | + | chr2.2:1677307-1677326 | MS.gene36289:CDS | 45.0% | |
AAGGAAGAGTCTTCGATCTG+AGG | + | chr2.2:1677601-1677620 | MS.gene36289:CDS | 45.0% | |
ACCTTCATTCCCAAATGGCT+GGG | - | chr2.2:1677141-1677160 | None:intergenic | 45.0% | |
ACGATGAAGATCGGTTAGGA+GGG | + | chr2.2:1676883-1676902 | MS.gene36289:CDS | 45.0% | |
AGAAGATGAAGAGCGGTTAG+TGG | + | chr2.2:1677178-1677197 | MS.gene36289:CDS | 45.0% | |
AGAGTCTTCGATCTGAGGAA+TGG | + | chr2.2:1677606-1677625 | MS.gene36289:CDS | 45.0% | |
AGATAGCAATGACGAGGATG+GGG | + | chr2.2:1677274-1677293 | MS.gene36289:CDS | 45.0% | |
AGGTATCCCTCTAACCCATA+TGG | + | chr2.2:1676723-1676742 | MS.gene36289:CDS | 45.0% | |
ATGAAGACGATGACACCGAT+GGG | + | chr2.2:1677042-1677061 | MS.gene36289:CDS | 45.0% | |
CATCATCATTCCCTCCTATC+CGG | - | chr2.2:1676974-1676993 | None:intergenic | 45.0% | |
CCTTCTCAGTCCATTCAGTA+AGG | - | chr2.2:1677532-1677551 | None:intergenic | 45.0% | |
CTCCATATTCCCAGCCATTT+GGG | + | chr2.2:1677129-1677148 | MS.gene36289:CDS | 45.0% | |
CTCTTGAGTTCGAACGACAA+GGG | - | chr2.2:1677832-1677851 | None:intergenic | 45.0% | |
GAAAATGTTGACGACGAGGA+TGG | + | chr2.2:1677305-1677324 | MS.gene36289:CDS | 45.0% | |
GAAGATAGCAATGACGAGGA+TGG | + | chr2.2:1677272-1677291 | MS.gene36289:CDS | 45.0% | |
GAGGGAATGACGATGAAGAT+CGG | + | chr2.2:1676874-1676893 | MS.gene36289:CDS | 45.0% | |
GGATGAAAATGTTGACGACG+AGG | + | chr2.2:1677301-1677320 | MS.gene36289:CDS | 45.0% | |
GTCTTCATCCACCTGCTTTA+GGG | - | chr2.2:1677030-1677049 | None:intergenic | 45.0% | |
GTTCGTGTAGAAGGTTTCGA+AGG | + | chr2.2:1677941-1677960 | MS.gene36289:CDS | 45.0% | |
TACCTTCATTCCCAAATGGC+TGG | - | chr2.2:1677142-1677161 | None:intergenic | 45.0% | |
TCATCATTCCCTAAAGCAGG+TGG | + | chr2.2:1677019-1677038 | MS.gene36289:CDS | 45.0% | |
TCGCCATACCCTTGATTGTT+AGG | - | chr2.2:1676759-1676778 | None:intergenic | 45.0% | |
TCTCCATATTCCCAGCCATT+TGG | + | chr2.2:1677128-1677147 | MS.gene36289:CDS | 45.0% | |
TCTCTTGAGTTCGAACGACA+AGG | - | chr2.2:1677833-1677852 | None:intergenic | 45.0% | |
TGCCCAAAGAAAAGAAGGAG+AGG | + | chr2.2:1677968-1677987 | MS.gene36289:CDS | 45.0% | |
TTCCCAAATGGCTGGGAATA+TGG | - | chr2.2:1677134-1677153 | None:intergenic | 45.0% | |
TTCTTGATGCTTGGGGTGAT+CGG | + | chr2.2:1677564-1677583 | MS.gene36289:CDS | 45.0% | |
TTGATGAAGACCGGATAGGA+GGG | + | chr2.2:1676961-1676980 | MS.gene36289:CDS | 45.0% | |
TTGATGAAGACCGGTTAGGA+GGG | + | chr2.2:1676922-1676941 | MS.gene36289:CDS | 45.0% | |
! | CTCCTTCTTTTCTTTGGGCA+AGG | - | chr2.2:1677968-1677987 | None:intergenic | 45.0% |
! | GCAGCTGCTAAACGATCTTT+TGG | + | chr2.2:1677494-1677513 | MS.gene36289:CDS | 45.0% |
! | GTTGTTGATGAAGACCGGAT+AGG | + | chr2.2:1676957-1676976 | MS.gene36289:CDS | 45.0% |
! | GTTGTTGATGAAGACCGGTT+AGG | + | chr2.2:1676918-1676937 | MS.gene36289:CDS | 45.0% |
!! | ACAGAATCGGTTCGTGTAGA+AGG | + | chr2.2:1677932-1677951 | MS.gene36289:CDS | 45.0% |
!! | ACCAACACCATATGGGTTAG+AGG | - | chr2.2:1676733-1676752 | None:intergenic | 45.0% |
!! | CCAACACCATATGGGTTAGA+GGG | - | chr2.2:1676732-1676751 | None:intergenic | 45.0% |
!! | CCTTACTGAATGGACTGAGA+AGG | + | chr2.2:1677529-1677548 | MS.gene36289:CDS | 45.0% |
!! | GGGTGGTGGAGATAGAAAAT+GGG | + | chr2.2:1677751-1677770 | MS.gene36289:CDS | 45.0% |
!! | TGGGTGGTGGAGATAGAAAA+TGG | + | chr2.2:1677750-1677769 | MS.gene36289:CDS | 45.0% |
AGATGAAGAGCGGTTAGTGG+AGG | + | chr2.2:1677181-1677200 | MS.gene36289:CDS | 50.0% | |
ATTGTCATCACCACCCCCAT+CGG | - | chr2.2:1677060-1677079 | None:intergenic | 50.0% | |
CAATGACGAGGATGGGGATA+GGG | + | chr2.2:1677280-1677299 | MS.gene36289:CDS | 50.0% | |
CCCTCTAACCCATATGGTGT+TGG | + | chr2.2:1676729-1676748 | MS.gene36289:CDS | 50.0% | |
CGGGTAGATTCATTTGCAGC+TGG | - | chr2.2:1676819-1676838 | None:intergenic | 50.0% | |
CGTCTTCATCCACCTGCTTT+AGG | - | chr2.2:1677031-1677050 | None:intergenic | 50.0% | |
GACCGACAAAGCGAGGAATA+TGG | + | chr2.2:1677080-1677099 | MS.gene36289:CDS | 50.0% | |
GACGATGAAGATCGGTTAGG+AGG | + | chr2.2:1676882-1676901 | MS.gene36289:CDS | 50.0% | |
GATGAAGACGATGACACCGA+TGG | + | chr2.2:1677041-1677060 | MS.gene36289:CDS | 50.0% | |
GCGATCTCAAACACCCTTTG+AGG | + | chr2.2:1676775-1676794 | MS.gene36289:CDS | 50.0% | |
GGCCTTGCCCAAAGAAAAGA+AGG | + | chr2.2:1677963-1677982 | MS.gene36289:CDS | 50.0% | |
TCCCAGCCATTTGGGAATGA+AGG | + | chr2.2:1677137-1677156 | MS.gene36289:CDS | 50.0% | |
TGAAGACGATGACACCGATG+GGG | + | chr2.2:1677043-1677062 | MS.gene36289:CDS | 50.0% | |
TGACAATGACCGACAAAGCG+AGG | + | chr2.2:1677073-1677092 | MS.gene36289:CDS | 50.0% | |
! | CAAGGGAGTCTTGCTTGTTG+TGG | - | chr2.2:1677815-1677834 | None:intergenic | 50.0% |
! | GTTGATGAAGACCGGATAGG+AGG | + | chr2.2:1676960-1676979 | MS.gene36289:CDS | 50.0% |
! | GTTGATGAAGACCGGTTAGG+AGG | + | chr2.2:1676921-1676940 | MS.gene36289:CDS | 50.0% |
CATCACCGTTCCCTCCTAAC+CGG | - | chr2.2:1676935-1676954 | None:intergenic | 55.0% | |
CGTTTAGCAGCTGCAGCTGA+CGG | - | chr2.2:1677488-1677507 | None:intergenic | 55.0% | |
GAAGACCGGTTAGGAGGGAA+CGG | + | chr2.2:1676927-1676946 | MS.gene36289:CDS | 55.0% | |
GAAGACGATGACACCGATGG+GGG | + | chr2.2:1677044-1677063 | MS.gene36289:CDS | 55.0% | |
GCAATGACGAGGATGGGGAT+AGG | + | chr2.2:1677279-1677298 | MS.gene36289:CDS | 55.0% | |
TGACGACGAGGATGGGGATA+GGG | + | chr2.2:1677313-1677332 | MS.gene36289:CDS | 55.0% | |
TTGACGACGAGGATGGGGAT+AGG | + | chr2.2:1677312-1677331 | MS.gene36289:CDS | 55.0% | |
!! | GGGAGTCTTGCTTGTTGTGG+TGG | - | chr2.2:1677812-1677831 | None:intergenic | 55.0% |
GACGATGACACCGATGGGGG+TGG | + | chr2.2:1677047-1677066 | MS.gene36289:CDS | 65.0% | |
GCAGCTGCAGCTGACGGTGT+TGG | - | chr2.2:1677482-1677501 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 1676693 | 1678207 | 1676693 | ID=MS.gene36289 |
chr2.2 | mRNA | 1676693 | 1678207 | 1676693 | ID=MS.gene36289.t1;Parent=MS.gene36289 |
chr2.2 | exon | 1676693 | 1678207 | 1676693 | ID=MS.gene36289.t1.exon1;Parent=MS.gene36289.t1 |
chr2.2 | CDS | 1676693 | 1678207 | 1676693 | ID=cds.MS.gene36289.t1;Parent=MS.gene36289.t1 |
Gene Sequence |
Protein sequence |