Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43945.t1 | XP_003590938.1 | 91.1 | 449 | 33 | 2 | 1 | 442 | 1 | 449 | 6.10E-224 | 786.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43945.t1 | Q9LKR8 | 57.9 | 392 | 154 | 6 | 55 | 442 | 50 | 434 | 2.2e-121 | 437.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43945.t1 | G7I682 | 91.1 | 449 | 33 | 2 | 1 | 442 | 1 | 449 | 4.4e-224 | 786.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene43945 | 0.810538 | 1.10E-50 | -1.69E-46 |
| MS.gene049346 | MS.gene43945 | 0.818203 | 2.22E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene43945 | 0.811268 | 7.62E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene43945 | 0.828231 | 1.01E-54 | -1.69E-46 |
| MS.gene049491 | MS.gene43945 | 0.816833 | 4.51E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene43945 | 0.814695 | 1.35E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene43945 | 0.849493 | 3.12E-60 | -1.69E-46 |
| MS.gene050099 | MS.gene43945 | 0.841248 | 5.33E-58 | -1.69E-46 |
| MS.gene050301 | MS.gene43945 | 0.855534 | 5.92E-62 | -1.69E-46 |
| MS.gene050397 | MS.gene43945 | 0.830035 | 3.68E-55 | -1.69E-46 |
| MS.gene050404 | MS.gene43945 | 0.849671 | 2.78E-60 | -1.69E-46 |
| MS.gene050406 | MS.gene43945 | 0.864334 | 1.31E-64 | -1.69E-46 |
| MS.gene050426 | MS.gene43945 | -0.805337 | 1.40E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene43945 | 0.837067 | 6.47E-57 | -1.69E-46 |
| MS.gene050464 | MS.gene43945 | 0.823513 | 1.33E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene43945 | 0.859648 | 3.58E-63 | -1.69E-46 |
| MS.gene050642 | MS.gene43945 | 0.811543 | 6.64E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene43945 | 0.804954 | 1.69E-49 | -1.69E-46 |
| MS.gene050783 | MS.gene43945 | 0.833522 | 5.08E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene43945 | 0.909741 | 4.07E-82 | -1.69E-46 |
| MS.gene05101 | MS.gene43945 | 0.864809 | 9.31E-65 | -1.69E-46 |
| MS.gene051171 | MS.gene43945 | 0.88718 | 1.79E-72 | -1.69E-46 |
| MS.gene051240 | MS.gene43945 | 0.870495 | 1.40E-66 | -1.69E-46 |
| MS.gene051242 | MS.gene43945 | 0.902753 | 7.02E-79 | -1.69E-46 |
| MS.gene051244 | MS.gene43945 | 0.878178 | 3.46E-69 | -1.69E-46 |
| MS.gene051471 | MS.gene43945 | 0.854583 | 1.12E-61 | -1.69E-46 |
| MS.gene051525 | MS.gene43945 | 0.809944 | 1.47E-50 | -1.69E-46 |
| MS.gene051582 | MS.gene43945 | 0.866021 | 3.86E-65 | -1.69E-46 |
| MS.gene051662 | MS.gene43945 | 0.801338 | 9.44E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene43945 | 0.811477 | 6.87E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene43945 | -0.803958 | 2.72E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene43945 | 0.847488 | 1.12E-59 | -1.69E-46 |
| MS.gene052178 | MS.gene43945 | 0.809141 | 2.19E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene43945 | 0.835911 | 1.27E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene43945 | 0.8242 | 9.18E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene43945 | 0.869069 | 4.08E-66 | -1.69E-46 |
| MS.gene052326 | MS.gene43945 | 0.831214 | 1.90E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene43945 | 0.866922 | 2.00E-65 | -1.69E-46 |
| MS.gene052481 | MS.gene43945 | 0.813781 | 2.15E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene43945 | 0.818302 | 2.10E-52 | -1.69E-46 |
| MS.gene052600 | MS.gene43945 | 0.817353 | 3.45E-52 | -1.69E-46 |
| MS.gene053107 | MS.gene43945 | 0.822435 | 2.37E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene43945 | 0.80038 | 1.48E-48 | -1.69E-46 |
| MS.gene053330 | MS.gene43945 | 0.864526 | 1.14E-64 | -1.69E-46 |
| MS.gene053557 | MS.gene43945 | 0.850669 | 1.46E-60 | -1.69E-46 |
| MS.gene053836 | MS.gene43945 | 0.854904 | 9.02E-62 | -1.69E-46 |
| MS.gene053907 | MS.gene43945 | 0.857309 | 1.78E-62 | -1.69E-46 |
| MS.gene053928 | MS.gene43945 | 0.829249 | 5.72E-55 | -1.69E-46 |
| MS.gene053971 | MS.gene43945 | 0.902126 | 1.33E-78 | -1.69E-46 |
| MS.gene054123 | MS.gene43945 | 0.823025 | 1.73E-53 | -1.69E-46 |
| MS.gene054327 | MS.gene43945 | 0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene05455 | MS.gene43945 | 0.825113 | 5.60E-54 | -1.69E-46 |
| MS.gene054719 | MS.gene43945 | 0.83019 | 3.38E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene43945 | 0.82071 | 5.94E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene43945 | 0.849963 | 2.31E-60 | -1.69E-46 |
| MS.gene055370 | MS.gene43945 | 0.84094 | 6.42E-58 | -1.69E-46 |
| MS.gene055390 | MS.gene43945 | 0.828908 | 6.92E-55 | -1.69E-46 |
| MS.gene055412 | MS.gene43945 | 0.817234 | 3.67E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene43945 | 0.832241 | 1.06E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene43945 | 0.862928 | 3.58E-64 | -1.69E-46 |
| MS.gene055539 | MS.gene43945 | 0.802302 | 5.99E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene43945 | 0.866933 | 1.98E-65 | -1.69E-46 |
| MS.gene055896 | MS.gene43945 | 0.815726 | 7.98E-52 | -1.69E-46 |
| MS.gene055971 | MS.gene43945 | 0.832568 | 8.78E-56 | -1.69E-46 |
| MS.gene056191 | MS.gene43945 | 0.80847 | 3.05E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene43945 | 0.843588 | 1.28E-58 | -1.69E-46 |
| MS.gene056451 | MS.gene43945 | 0.867271 | 1.55E-65 | -1.69E-46 |
| MS.gene056609 | MS.gene43945 | 0.804691 | 1.91E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene43945 | 0.858453 | 8.15E-63 | -1.69E-46 |
| MS.gene056633 | MS.gene43945 | 0.843524 | 1.33E-58 | -1.69E-46 |
| MS.gene056659 | MS.gene43945 | 0.812866 | 3.42E-51 | -1.69E-46 |
| MS.gene056664 | MS.gene43945 | 0.87927 | 1.43E-69 | -1.69E-46 |
| MS.gene056723 | MS.gene43945 | 0.823344 | 1.46E-53 | -1.69E-46 |
| MS.gene056796 | MS.gene43945 | 0.865199 | 7.02E-65 | -1.69E-46 |
| MS.gene057011 | MS.gene43945 | 0.830272 | 3.22E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene43945 | 0.839147 | 1.89E-57 | -1.69E-46 |
| MS.gene057032 | MS.gene43945 | 0.820753 | 5.81E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene43945 | 0.859283 | 4.60E-63 | -1.69E-46 |
| MS.gene057196 | MS.gene43945 | 0.837374 | 5.40E-57 | -1.69E-46 |
| MS.gene05733 | MS.gene43945 | 0.81557 | 8.64E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene43945 | 0.802419 | 5.66E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene43945 | 0.820752 | 5.81E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene43945 | 0.812814 | 3.51E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene43945 | 0.899709 | 1.51E-77 | -1.69E-46 |
| MS.gene05811 | MS.gene43945 | 0.862309 | 5.55E-64 | -1.69E-46 |
| MS.gene058142 | MS.gene43945 | 0.855475 | 6.16E-62 | -1.69E-46 |
| MS.gene058233 | MS.gene43945 | 0.894101 | 3.38E-75 | -1.69E-46 |
| MS.gene058276 | MS.gene43945 | 0.903405 | 3.59E-79 | -1.69E-46 |
| MS.gene058293 | MS.gene43945 | 0.862211 | 5.95E-64 | -1.69E-46 |
| MS.gene058365 | MS.gene43945 | 0.837974 | 3.79E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene43945 | 0.851534 | 8.34E-61 | -1.69E-46 |
| MS.gene058743 | MS.gene43945 | 0.825919 | 3.60E-54 | -1.69E-46 |
| MS.gene058746 | MS.gene43945 | 0.884928 | 1.26E-71 | -1.69E-46 |
| MS.gene058833 | MS.gene43945 | 0.80872 | 2.70E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene43945 | 0.801731 | 7.84E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene43945 | 0.862736 | 4.10E-64 | -1.69E-46 |
| MS.gene059141 | MS.gene43945 | 0.80996 | 1.46E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene43945 | 0.801481 | 8.82E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene43945 | 0.82379 | 1.15E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene43945 | 0.857796 | 1.28E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene43945 | 0.850158 | 2.03E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene43945 | 0.828747 | 7.57E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene43945 | 0.847423 | 1.17E-59 | -1.69E-46 |
| MS.gene059695 | MS.gene43945 | 0.851683 | 7.56E-61 | -1.69E-46 |
| MS.gene059708 | MS.gene43945 | 0.802789 | 4.75E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene43945 | 0.83749 | 5.04E-57 | -1.69E-46 |
| MS.gene059869 | MS.gene43945 | -0.811886 | 5.59E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene43945 | 0.877277 | 7.15E-69 | -1.69E-46 |
| MS.gene059960 | MS.gene43945 | 0.831274 | 1.83E-55 | -1.69E-46 |
| MS.gene060083 | MS.gene43945 | 0.801565 | 8.48E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene43945 | 0.918856 | 9.30E-87 | -1.69E-46 |
| MS.gene06090 | MS.gene43945 | 0.82937 | 5.35E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene43945 | 0.864926 | 8.55E-65 | -1.69E-46 |
| MS.gene061051 | MS.gene43945 | -0.813371 | 2.65E-51 | -1.69E-46 |
| MS.gene061112 | MS.gene43945 | 0.80559 | 1.24E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene43945 | 0.800323 | 1.52E-48 | -1.69E-46 |
| MS.gene061231 | MS.gene43945 | 0.81077 | 9.77E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43945.t1 | MTR_1g079870 | 94.432 | 449 | 18 | 2 | 1 | 442 | 1 | 449 | 0.0 | 855 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43945.t1 | AT3G04550 | 58.081 | 396 | 150 | 6 | 56 | 442 | 61 | 449 | 1.07e-153 | 443 |
| MS.gene43945.t1 | AT5G28500 | 53.864 | 440 | 188 | 9 | 8 | 442 | 5 | 434 | 3.68e-143 | 416 |
| MS.gene43945.t1 | AT5G28500 | 59.434 | 212 | 86 | 0 | 55 | 266 | 50 | 261 | 1.74e-82 | 255 |
Find 115 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGGTGGTGTTACCGGCTT+GGG | 0.218551 | 1.3:-56563701 | MS.gene43945:CDS |
| TAAAGCTAGAAAAGTGATTT+TGG | 0.219981 | 1.3:-56563950 | MS.gene43945:CDS |
| TGGTAATGATGTTGGTTTAA+AGG | 0.259795 | 1.3:-56563512 | MS.gene43945:CDS |
| GGAAGGAGAAAGGGTGATTA+TGG | 0.275153 | 1.3:-56563791 | MS.gene43945:CDS |
| TGTTCAAGAAAAGCAGTTCT+TGG | 0.278998 | 1.3:+56563997 | None:intergenic |
| CGGAGAAAGGGTGGGAGAAA+TGG | 0.285910 | 1.3:-56563720 | MS.gene43945:CDS |
| GGACGGCTGAGATTGATTTA+AGG | 0.286999 | 1.3:+56564601 | None:intergenic |
| CTATCAGCAACCACCAAAAT+AGG | 0.309921 | 1.3:+56563586 | None:intergenic |
| ATGGGTGTTAACGAGTGTTT+AGG | 0.310994 | 1.3:-56563463 | MS.gene43945:CDS |
| GTATAAGGAAGAGCCTATTT+TGG | 0.313854 | 1.3:-56563599 | MS.gene43945:CDS |
| GGAGAAATGGGTGGTGTTAC+CGG | 0.322308 | 1.3:-56563707 | MS.gene43945:CDS |
| GAATGATGATGGGCTCTATT+TGG | 0.341099 | 1.3:-56563545 | MS.gene43945:CDS |
| GGTATTGTGGTGGCGGAGAA+AGG | 0.343947 | 1.3:-56563733 | MS.gene43945:CDS |
| ATATGTTGAGTGAAGAAGTT+TGG | 0.346774 | 1.3:-56563396 | MS.gene43945:CDS |
| TTCAATCTCACCACATTAAC+AGG | 0.351102 | 1.3:+56563871 | None:intergenic |
| GGAGAAAGGGTGGGAGAAAT+GGG | 0.357471 | 1.3:-56563719 | MS.gene43945:CDS |
| GAAGGCTAATAGGTGGTATA+AGG | 0.372638 | 1.3:-56563614 | MS.gene43945:CDS |
| TGGGTGTTAACGAGTGTTTA+GGG | 0.380614 | 1.3:-56563462 | MS.gene43945:CDS |
| AGATCTAGCTCGTTCGATAA+AGG | 0.388492 | 1.3:-56564136 | MS.gene43945:CDS |
| TTTGTATTACAGACAAAGTA+AGG | 0.394057 | 1.3:-56564040 | MS.gene43945:CDS |
| GGAATGTAGTTATTGTTGTT+AGG | 0.400847 | 1.3:-56563441 | MS.gene43945:CDS |
| TTTGATGGGAGAGGTGTTGG+TGG | 0.417794 | 1.3:+56564501 | None:intergenic |
| AATGGGTGGTGTTACCGGCT+TGG | 0.425130 | 1.3:-56563702 | MS.gene43945:CDS |
| GATGCCGGTGGTTTCTTCAA+TGG | 0.425964 | 1.3:+56564362 | None:intergenic |
| TGGTTGCTGATAGGAGTAAG+AGG | 0.436269 | 1.3:-56563576 | MS.gene43945:CDS |
| GGAGAGGTGTTGGTGGTGGC+CGG | 0.440619 | 1.3:+56564508 | None:intergenic |
| GTAATAAGAACGGTTGAGAT+TGG | 0.442968 | 1.3:+56564626 | None:intergenic |
| AGGTGTTGGTGGTGGCCGGA+AGG | 0.444065 | 1.3:+56564512 | None:intergenic |
| TGCTGCAGCGCGTTGCGAAG+TGG | 0.449630 | 1.3:+56564203 | None:intergenic |
| ACGGTTGAGATTGGAGGAAG+AGG | 0.450106 | 1.3:+56564635 | None:intergenic |
| GAGAATTTCTTCATCAGTGT+TGG | 0.451727 | 1.3:+56564278 | None:intergenic |
| TTGGTGGTGGCCGGAAGGGT+TGG | 0.452401 | 1.3:+56564517 | None:intergenic |
| AACAACTATACCAACCCTTC+CGG | 0.455105 | 1.3:-56564527 | MS.gene43945:CDS |
| TGTTGGTTTAAAGGTTCAAA+GGG | 0.456616 | 1.3:-56563503 | MS.gene43945:CDS |
| CTGTTCAACGCCGGTGATGC+CGG | 0.456625 | 1.3:+56564347 | None:intergenic |
| AGGGAGGTGGAGAATGATGA+TGG | 0.457400 | 1.3:-56563556 | MS.gene43945:CDS |
| GTATTGTGGTGGCGGAGAAA+GGG | 0.458441 | 1.3:-56563732 | MS.gene43945:CDS |
| TTGTGGTGGCGGAGAAAGGG+TGG | 0.459053 | 1.3:-56563729 | MS.gene43945:CDS |
| TGGGAAGGCTGAAGAGGAGG+AGG | 0.459630 | 1.3:-56563917 | MS.gene43945:CDS |
| GCGAGGATGTCGATGCGACC+TGG | 0.461881 | 1.3:+56564459 | None:intergenic |
| GTTGAGTGGGAAGGCTGAAG+AGG | 0.478627 | 1.3:-56563923 | MS.gene43945:CDS |
| GAGTGGGAAGGCTGAAGAGG+AGG | 0.488401 | 1.3:-56563920 | MS.gene43945:CDS |
| TCGCCAACCGTCTCGGTGCA+TGG | 0.488440 | 1.3:-56564440 | MS.gene43945:CDS |
| CTCTATTTGGTAAAAGATGA+TGG | 0.490267 | 1.3:-56563532 | MS.gene43945:CDS |
| TGGGAGGTGAAAAGCCTTCA+CGG | 0.490867 | 1.3:+56564385 | None:intergenic |
| AAAGATGATGGTAATGATGT+TGG | 0.491642 | 1.3:-56563520 | MS.gene43945:CDS |
| GATGGGAGAGGTGTTGGTGG+TGG | 0.491919 | 1.3:+56564504 | None:intergenic |
| GGTGTTGGTGGTGGCCGGAA+GGG | 0.494017 | 1.3:+56564513 | None:intergenic |
| ATTGTGGAGAAGAGATATGA+TGG | 0.494977 | 1.3:-56564171 | MS.gene43945:CDS |
| TAAAGCTGAGGAAGGAGAAA+GGG | 0.501190 | 1.3:-56563800 | MS.gene43945:CDS |
| CTCTCTTACTTTGATAGCGG+TGG | 0.504853 | 1.3:-56564258 | MS.gene43945:CDS |
| GACATCCTCGCCAACCGTCT+CGG | 0.514848 | 1.3:-56564447 | MS.gene43945:CDS |
| TATGTTGAGTGAAGAAGTTT+GGG | 0.515005 | 1.3:-56563395 | MS.gene43945:CDS |
| GGTTGGTATAGTTGTTTCTG+TGG | 0.515153 | 1.3:+56564534 | None:intergenic |
| CGGTTGAGATTGGAGGAAGA+GGG | 0.515311 | 1.3:+56564636 | None:intergenic |
| GTGAAAAGCCTTCACGGAGG+AGG | 0.515910 | 1.3:+56564391 | None:intergenic |
| GAAGAAACCACCGGCATCAC+CGG | 0.516277 | 1.3:-56564357 | MS.gene43945:CDS |
| GTAAAGCTGAGGAAGGAGAA+AGG | 0.520531 | 1.3:-56563801 | MS.gene43945:CDS |
| ATGTTGGTTTAAAGGTTCAA+AGG | 0.522076 | 1.3:-56563504 | MS.gene43945:CDS |
| AAAGCAGTTCTTGGATCAGA+AGG | 0.525966 | 1.3:+56564006 | None:intergenic |
| GGAAGGTGAGTTTGGTATTG+TGG | 0.527760 | 1.3:-56563746 | MS.gene43945:CDS |
| CCGGTGGTTTCTTCAATGGT+GGG | 0.529159 | 1.3:+56564366 | None:intergenic |
| TGATAGGAGTAAGAGGGAGG+TGG | 0.538668 | 1.3:-56563569 | MS.gene43945:CDS |
| CCTTTCCCTAAATTAACCAC+CGG | 0.543574 | 1.3:+56563676 | None:intergenic |
| TGAGTTTGGTATTGTGGTGG+CGG | 0.548046 | 1.3:-56563740 | MS.gene43945:CDS |
| TGGGTGGTGTTACCGGCTTG+GGG | 0.549034 | 1.3:-56563700 | MS.gene43945:CDS |
| GCCGGTGGTTTCTTCAATGG+TGG | 0.549809 | 1.3:+56564365 | None:intergenic |
| ATCACTTCCCTCCTCCGTGA+AGG | 0.550355 | 1.3:-56564399 | MS.gene43945:CDS |
| TACCACCTATTAGCCTTCCA+TGG | 0.550710 | 1.3:+56563619 | None:intergenic |
| TACGACAACCTCGACATCCC+AGG | 0.551748 | 1.3:-56564477 | MS.gene43945:CDS |
| GGTTGCTGATAGGAGTAAGA+GGG | 0.554153 | 1.3:-56563575 | MS.gene43945:CDS |
| AGTTCGTGACACTCTTGTAC+AGG | 0.555093 | 1.3:-56564301 | MS.gene43945:CDS |
| GAGAAGAGATATGATGGAAA+AGG | 0.557379 | 1.3:-56564165 | MS.gene43945:CDS |
| TGAAAAGCCTTCACGGAGGA+GGG | 0.561008 | 1.3:+56564392 | None:intergenic |
| CCGGTGGTTAATTTAGGGAA+AGG | 0.562795 | 1.3:-56563676 | MS.gene43945:CDS |
| ATTTAAGGCGGTAATAAGAA+CGG | 0.564306 | 1.3:+56564616 | None:intergenic |
| ATAAGAACGGTTGAGATTGG+AGG | 0.569107 | 1.3:+56564629 | None:intergenic |
| TGCAGCAGCGCGTTTCATTG+TGG | 0.569545 | 1.3:-56564187 | MS.gene43945:CDS |
| TGCTGATAGGAGTAAGAGGG+AGG | 0.570809 | 1.3:-56563572 | MS.gene43945:CDS |
| ACGAATTTCGTATAAAACTT+CGG | 0.573452 | 1.3:+56564233 | None:intergenic |
| AAATAAGCAAGACAATCTCC+CGG | 0.574397 | 1.3:+56564060 | None:intergenic |
| AGGTGAGTTTGGTATTGTGG+TGG | 0.575600 | 1.3:-56563743 | MS.gene43945:CDS |
| TGTGGTGGCGGAGAAAGGGT+GGG | 0.576608 | 1.3:-56563728 | MS.gene43945:CDS |
| AATAAGCAAGACAATCTCCC+GGG | 0.581163 | 1.3:+56564061 | None:intergenic |
| TTTGGAGGAGTTGAGTGGGA+AGG | 0.583878 | 1.3:-56563932 | MS.gene43945:CDS |
| AATGTGGTGAGATTGAAGAT+TGG | 0.584496 | 1.3:-56563865 | MS.gene43945:CDS |
| GGGTGGTGTTACCGGCTTGG+GGG | 0.590439 | 1.3:-56563699 | MS.gene43945:CDS |
| TTCAACGCCGGTGATGCCGG+TGG | 0.591596 | 1.3:+56564350 | None:intergenic |
| CAGCGCGTTGCGAAGTGGAG+AGG | 0.594130 | 1.3:+56564208 | None:intergenic |
| GGGAGGTGGAGAATGATGAT+GGG | 0.594428 | 1.3:-56563555 | MS.gene43945:CDS |
| CGAGGATGTCGATGCGACCT+GGG | 0.601264 | 1.3:+56564460 | None:intergenic |
| ATTAAAAGTGCCTGTTAATG+TGG | 0.605844 | 1.3:-56563881 | MS.gene43945:CDS |
| ATTCTCTCTTACTTTGATAG+CGG | 0.611214 | 1.3:-56564261 | MS.gene43945:CDS |
| GAAAGGGTGGGAGAAATGGG+TGG | 0.611751 | 1.3:-56563716 | MS.gene43945:CDS |
| CCTTCCTCAGCTTTACACAC+CGG | 0.615461 | 1.3:+56563808 | None:intergenic |
| ATGCACCGAGACGGTTGGCG+AGG | 0.618334 | 1.3:+56564442 | None:intergenic |
| TGATGAAGGGTTGTTGAGGA+CGG | 0.618497 | 1.3:+56564584 | None:intergenic |
| CGGAGGAGGGAAGTGATGAG+AGG | 0.622871 | 1.3:+56564405 | None:intergenic |
| CCGGTGTGTAAAGCTGAGGA+AGG | 0.623619 | 1.3:-56563808 | MS.gene43945:CDS |
| GTGCCATGCACCGAGACGGT+TGG | 0.624137 | 1.3:+56564437 | None:intergenic |
| GTGGTTTCTTCAATGGTGGG+AGG | 0.629301 | 1.3:+56564369 | None:intergenic |
| AGTAGCTGAGGCGACTTCAG+TGG | 0.630858 | 1.3:-56563839 | MS.gene43945:CDS |
| CGGCTGAGATTGATTTAAGG+CGG | 0.631698 | 1.3:+56564604 | None:intergenic |
| GAAGATTGGTGAAGTAGCTG+AGG | 0.639205 | 1.3:-56563851 | MS.gene43945:CDS |
| TACCATGGAAGGCTAATAGG+TGG | 0.643378 | 1.3:-56563621 | MS.gene43945:CDS |
| CCCACCATTGAAGAAACCAC+CGG | 0.643863 | 1.3:-56564366 | MS.gene43945:CDS |
| ATTCGTGCCATGCACCGAGA+CGG | 0.651777 | 1.3:+56564433 | None:intergenic |
| AGGCCACCTACTGAAAATGA+TGG | 0.653259 | 1.3:-56563421 | MS.gene43945:CDS |
| CGATGCGACCTGGGATGTCG+AGG | 0.661450 | 1.3:+56564469 | None:intergenic |
| GTGTTTACAGAACTGATACA+TGG | 0.661658 | 1.3:+56564687 | None:intergenic |
| GATACGATTCTGTTCAACGC+CGG | 0.685752 | 1.3:+56564338 | None:intergenic |
| GTTGGTTTAAAGGTTCAAAG+GGG | 0.692675 | 1.3:-56563502 | MS.gene43945:CDS |
| TTTGCCGGTGTGTAAAGCTG+AGG | 0.704737 | 1.3:-56563812 | MS.gene43945:CDS |
| TGTGTGATGAAGGGTTGTTG+AGG | 0.731033 | 1.3:+56564580 | None:intergenic |
| GAGGTGAAAAGCCTTCACGG+AGG | 0.826855 | 1.3:+56564388 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACGAATTTCGTATAAAACTT+CGG | + | chr1.3:56563856-56563875 | None:intergenic | 25.0% |
| ! | TTTGTATTACAGACAAAGTA+AGG | - | chr1.3:56564046-56564065 | MS.gene43945:CDS | 25.0% |
| !! | TAAAGCTAGAAAAGTGATTT+TGG | - | chr1.3:56564136-56564155 | MS.gene43945:CDS | 25.0% |
| ATATGTTGAGTGAAGAAGTT+TGG | - | chr1.3:56564690-56564709 | MS.gene43945:CDS | 30.0% | |
| ATTAAAAAGGAAGGTGAGTT+TGG | - | chr1.3:56564332-56564351 | MS.gene43945:CDS | 30.0% | |
| ATTCTCTCTTACTTTGATAG+CGG | - | chr1.3:56563825-56563844 | MS.gene43945:CDS | 30.0% | |
| CTCTATTTGGTAAAAGATGA+TGG | - | chr1.3:56564554-56564573 | MS.gene43945:CDS | 30.0% | |
| TATGTTGAGTGAAGAAGTTT+GGG | - | chr1.3:56564691-56564710 | MS.gene43945:CDS | 30.0% | |
| ! | AAAGATGATGGTAATGATGT+TGG | - | chr1.3:56564566-56564585 | MS.gene43945:CDS | 30.0% |
| ! | ATATCACCATCATTTTCAGT+AGG | + | chr1.3:56564674-56564693 | None:intergenic | 30.0% |
| ! | ATTTAAGGCGGTAATAAGAA+CGG | + | chr1.3:56563473-56563492 | None:intergenic | 30.0% |
| ! | CCTTCCTTTTTAATCTCAAA+AGG | + | chr1.3:56564326-56564345 | None:intergenic | 30.0% |
| ! | GGAATGTAGTTATTGTTGTT+AGG | - | chr1.3:56564645-56564664 | MS.gene43945:CDS | 30.0% |
| !! | ATGTTGGTTTAAAGGTTCAA+AGG | - | chr1.3:56564582-56564601 | MS.gene43945:CDS | 30.0% |
| !! | ATTAAAAGTGCCTGTTAATG+TGG | - | chr1.3:56564205-56564224 | MS.gene43945:CDS | 30.0% |
| !! | TGGTAATGATGTTGGTTTAA+AGG | - | chr1.3:56564574-56564593 | MS.gene43945:CDS | 30.0% |
| !! | TGTTGGTTTAAAGGTTCAAA+GGG | - | chr1.3:56564583-56564602 | MS.gene43945:CDS | 30.0% |
| !!! | AGCACCTTTTGAGATTAAAA+AGG | - | chr1.3:56564319-56564338 | MS.gene43945:CDS | 30.0% |
| !!! | CCTTTTGAGATTAAAAAGGA+AGG | - | chr1.3:56564323-56564342 | MS.gene43945:CDS | 30.0% |
| AAATAAGCAAGACAATCTCC+CGG | + | chr1.3:56564029-56564048 | None:intergenic | 35.0% | |
| AATGTGGTGAGATTGAAGAT+TGG | - | chr1.3:56564221-56564240 | MS.gene43945:CDS | 35.0% | |
| ATTGTGGAGAAGAGATATGA+TGG | - | chr1.3:56563915-56563934 | MS.gene43945:CDS | 35.0% | |
| GAGAATTTCTTCATCAGTGT+TGG | + | chr1.3:56563811-56563830 | None:intergenic | 35.0% | |
| GTAATAAGAACGGTTGAGAT+TGG | + | chr1.3:56563463-56563482 | None:intergenic | 35.0% | |
| GTGTTTACAGAACTGATACA+TGG | + | chr1.3:56563402-56563421 | None:intergenic | 35.0% | |
| TAGACGCGGTGAAAAAAATT+GGG | - | chr1.3:56563983-56564002 | MS.gene43945:CDS | 35.0% | |
| TGTTCAAGAAAAGCAGTTCT+TGG | + | chr1.3:56564092-56564111 | None:intergenic | 35.0% | |
| TTCAATCTCACCACATTAAC+AGG | + | chr1.3:56564218-56564237 | None:intergenic | 35.0% | |
| ! | AGCTAGAAAAGTGATTTTGG+AGG | - | chr1.3:56564139-56564158 | MS.gene43945:CDS | 35.0% |
| ! | GAGAAGAGATATGATGGAAA+AGG | - | chr1.3:56563921-56563940 | MS.gene43945:CDS | 35.0% |
| ! | GTATAAGGAAGAGCCTATTT+TGG | - | chr1.3:56564487-56564506 | MS.gene43945:CDS | 35.0% |
| ! | GTTGGTTTAAAGGTTCAAAG+GGG | - | chr1.3:56564584-56564603 | MS.gene43945:CDS | 35.0% |
| ! | TTTTACCATGGAAGGCTAAT+AGG | - | chr1.3:56564462-56564481 | MS.gene43945:CDS | 35.0% |
| !! | GGTTCGATTTTGAAGGAAAT+GGG | - | chr1.3:56564605-56564624 | MS.gene43945:CDS | 35.0% |
| !!! | AGTTTTGATTATCATCTCCC+GGG | - | chr1.3:56564008-56564027 | MS.gene43945:CDS | 35.0% |
| !!! | GAGTTTTGATTATCATCTCC+CGG | - | chr1.3:56564007-56564026 | MS.gene43945:CDS | 35.0% |
| !!! | GTTTTTTGCTGTGTGATGAA+GGG | + | chr1.3:56563518-56563537 | None:intergenic | 35.0% |
| !!! | TGTTTTTTGCTGTGTGATGA+AGG | + | chr1.3:56563519-56563538 | None:intergenic | 35.0% |
| AAAGCAGTTCTTGGATCAGA+AGG | + | chr1.3:56564083-56564102 | None:intergenic | 40.0% | |
| AACAACTATACCAACCCTTC+CGG | - | chr1.3:56563559-56563578 | MS.gene43945:CDS | 40.0% | |
| AATAAGCAAGACAATCTCCC+GGG | + | chr1.3:56564028-56564047 | None:intergenic | 40.0% | |
| ATAAGAACGGTTGAGATTGG+AGG | + | chr1.3:56563460-56563479 | None:intergenic | 40.0% | |
| ATGGGTGTTAACGAGTGTTT+AGG | - | chr1.3:56564623-56564642 | MS.gene43945:CDS | 40.0% | |
| CCTTTCCCTAAATTAACCAC+CGG | + | chr1.3:56564413-56564432 | None:intergenic | 40.0% | |
| CTATCAGCAACCACCAAAAT+AGG | + | chr1.3:56564503-56564522 | None:intergenic | 40.0% | |
| GAAGGCTAATAGGTGGTATA+AGG | - | chr1.3:56564472-56564491 | MS.gene43945:CDS | 40.0% | |
| GTAGACGCGGTGAAAAAAAT+TGG | - | chr1.3:56563982-56564001 | MS.gene43945:CDS | 40.0% | |
| TAAAGCTGAGGAAGGAGAAA+GGG | - | chr1.3:56564286-56564305 | MS.gene43945:CDS | 40.0% | |
| TGGGTGTTAACGAGTGTTTA+GGG | - | chr1.3:56564624-56564643 | MS.gene43945:CDS | 40.0% | |
| ! | AAGGATTTTCCTAGTAGACG+CGG | - | chr1.3:56563969-56563988 | MS.gene43945:CDS | 40.0% |
| ! | AGATCTAGCTCGTTCGATAA+AGG | - | chr1.3:56563950-56563969 | MS.gene43945:CDS | 40.0% |
| ! | TCAAAGGGGTTCGATTTTGA+AGG | - | chr1.3:56564598-56564617 | MS.gene43945:CDS | 40.0% |
| ! | TCACCATCATTTTCAGTAGG+TGG | + | chr1.3:56564671-56564690 | None:intergenic | 40.0% |
| ! | TGCTAGAGTTTTACCATGGA+AGG | - | chr1.3:56564454-56564473 | MS.gene43945:CDS | 40.0% |
| ! | TGGATGCTAGAGTTTTACCA+TGG | - | chr1.3:56564450-56564469 | MS.gene43945:CDS | 40.0% |
| !! | GAATGATGATGGGCTCTATT+TGG | - | chr1.3:56564541-56564560 | MS.gene43945:CDS | 40.0% |
| !! | GGGTTCGATTTTGAAGGAAA+TGG | - | chr1.3:56564604-56564623 | MS.gene43945:CDS | 40.0% |
| !! | GGTTGGTATAGTTGTTTCTG+TGG | + | chr1.3:56563555-56563574 | None:intergenic | 40.0% |
| !! | TAAGGAAGAGCCTATTTTGG+TGG | - | chr1.3:56564490-56564509 | MS.gene43945:CDS | 40.0% |
| !! | TCGAGGTTGTCGTATTTTGA+TGG | + | chr1.3:56563603-56563622 | None:intergenic | 40.0% |
| !! | TGATTTTGGAGGAGTTGAGT+GGG | - | chr1.3:56564150-56564169 | MS.gene43945:CDS | 40.0% |
| !!! | CGAGGTTGTCGTATTTTGAT+GGG | + | chr1.3:56563602-56563621 | None:intergenic | 40.0% |
| !!! | CTATTTTGGTGGTTGCTGAT+AGG | - | chr1.3:56564501-56564520 | MS.gene43945:CDS | 40.0% |
| !!! | TATTTTGATGGGAGAGGTGT+TGG | + | chr1.3:56563591-56563610 | None:intergenic | 40.0% |
| !!! | TTGTCGTATTTTGATGGGAG+AGG | + | chr1.3:56563597-56563616 | None:intergenic | 40.0% |
| !!! | TTTTTTTCACCGCGTCTACT+AGG | + | chr1.3:56563981-56564000 | None:intergenic | 40.0% |
| AGGCCACCTACTGAAAATGA+TGG | - | chr1.3:56564665-56564684 | MS.gene43945:CDS | 45.0% | |
| AGGTGAGTTTGGTATTGTGG+TGG | - | chr1.3:56564343-56564362 | MS.gene43945:CDS | 45.0% | |
| AGTTCGTGACACTCTTGTAC+AGG | - | chr1.3:56563785-56563804 | MS.gene43945:CDS | 45.0% | |
| CCGGTGGTTAATTTAGGGAA+AGG | - | chr1.3:56564410-56564429 | MS.gene43945:CDS | 45.0% | |
| GAAGATTGGTGAAGTAGCTG+AGG | - | chr1.3:56564235-56564254 | MS.gene43945:CDS | 45.0% | |
| GATACGATTCTGTTCAACGC+CGG | + | chr1.3:56563751-56563770 | None:intergenic | 45.0% | |
| GGAAGGAGAAAGGGTGATTA+TGG | - | chr1.3:56564295-56564314 | MS.gene43945:CDS | 45.0% | |
| GGAAGGTGAGTTTGGTATTG+TGG | - | chr1.3:56564340-56564359 | MS.gene43945:CDS | 45.0% | |
| GGTTGCTGATAGGAGTAAGA+GGG | - | chr1.3:56564511-56564530 | MS.gene43945:CDS | 45.0% | |
| GTAAAGCTGAGGAAGGAGAA+AGG | - | chr1.3:56564285-56564304 | MS.gene43945:CDS | 45.0% | |
| TACCATGGAAGGCTAATAGG+TGG | - | chr1.3:56564465-56564484 | MS.gene43945:CDS | 45.0% | |
| TGAGTTTGGTATTGTGGTGG+CGG | - | chr1.3:56564346-56564365 | MS.gene43945:CDS | 45.0% | |
| TGATGAAGGGTTGTTGAGGA+CGG | + | chr1.3:56563505-56563524 | None:intergenic | 45.0% | |
| TGGTTGCTGATAGGAGTAAG+AGG | - | chr1.3:56564510-56564529 | MS.gene43945:CDS | 45.0% | |
| TGTGTGATGAAGGGTTGTTG+AGG | + | chr1.3:56563509-56563528 | None:intergenic | 45.0% | |
| ! | CGGCTGAGATTGATTTAAGG+CGG | + | chr1.3:56563485-56563504 | None:intergenic | 45.0% |
| ! | GGACGGCTGAGATTGATTTA+AGG | + | chr1.3:56563488-56563507 | None:intergenic | 45.0% |
| !! | CTCTCTTACTTTGATAGCGG+TGG | - | chr1.3:56563828-56563847 | MS.gene43945:CDS | 45.0% |
| !! | GACTTCAGTGGTTGTTTTGC+CGG | - | chr1.3:56564259-56564278 | MS.gene43945:CDS | 45.0% |
| !! | GTGATTTTGGAGGAGTTGAG+TGG | - | chr1.3:56564149-56564168 | MS.gene43945:CDS | 45.0% |
| !! | TACCACCTATTAGCCTTCCA+TGG | + | chr1.3:56564470-56564489 | None:intergenic | 45.0% |
| !!! | AGGCGTTGTTGTGTCGTTTT+TGG | - | chr1.3:56564430-56564449 | MS.gene43945:CDS | 45.0% |
| ACGGTTGAGATTGGAGGAAG+AGG | + | chr1.3:56563454-56563473 | None:intergenic | 50.0% | |
| AGGGAGGTGGAGAATGATGA+TGG | - | chr1.3:56564530-56564549 | MS.gene43945:CDS | 50.0% | |
| CCCACCATTGAAGAAACCAC+CGG | - | chr1.3:56563720-56563739 | MS.gene43945:CDS | 50.0% | |
| CCGGTGGTTTCTTCAATGGT+GGG | + | chr1.3:56563723-56563742 | None:intergenic | 50.0% | |
| CCTTCCTCAGCTTTACACAC+CGG | + | chr1.3:56564281-56564300 | None:intergenic | 50.0% | |
| CGGTTGAGATTGGAGGAAGA+GGG | + | chr1.3:56563453-56563472 | None:intergenic | 50.0% | |
| GATGCCGGTGGTTTCTTCAA+TGG | + | chr1.3:56563727-56563746 | None:intergenic | 50.0% | |
| GGAGAAAGGGTGGGAGAAAT+GGG | - | chr1.3:56564367-56564386 | MS.gene43945:CDS | 50.0% | |
| GGGAGGTGGAGAATGATGAT+GGG | - | chr1.3:56564531-56564550 | MS.gene43945:CDS | 50.0% | |
| TGAAAAGCCTTCACGGAGGA+GGG | + | chr1.3:56563697-56563716 | None:intergenic | 50.0% | |
| TGATAGGAGTAAGAGGGAGG+TGG | - | chr1.3:56564517-56564536 | MS.gene43945:CDS | 50.0% | |
| TGCTGATAGGAGTAAGAGGG+AGG | - | chr1.3:56564514-56564533 | MS.gene43945:CDS | 50.0% | |
| TGGGAGGTGAAAAGCCTTCA+CGG | + | chr1.3:56563704-56563723 | None:intergenic | 50.0% | |
| TTTGCCGGTGTGTAAAGCTG+AGG | - | chr1.3:56564274-56564293 | MS.gene43945:CDS | 50.0% | |
| TTTGGAGGAGTTGAGTGGGA+AGG | - | chr1.3:56564154-56564173 | MS.gene43945:CDS | 50.0% | |
| ! | GTGGTTTCTTCAATGGTGGG+AGG | + | chr1.3:56563720-56563739 | None:intergenic | 50.0% |
| !! | GGAGAAATGGGTGGTGTTAC+CGG | - | chr1.3:56564379-56564398 | MS.gene43945:CDS | 50.0% |
| !! | GTATTGTGGTGGCGGAGAAA+GGG | - | chr1.3:56564354-56564373 | MS.gene43945:CDS | 50.0% |
| !! | TTTGATGGGAGAGGTGTTGG+TGG | + | chr1.3:56563588-56563607 | None:intergenic | 50.0% |
| AGTAGCTGAGGCGACTTCAG+TGG | - | chr1.3:56564247-56564266 | MS.gene43945:CDS | 55.0% | |
| ATCACTTCCCTCCTCCGTGA+AGG | - | chr1.3:56563687-56563706 | MS.gene43945:CDS | 55.0% | |
| ATTCGTGCCATGCACCGAGA+CGG | + | chr1.3:56563656-56563675 | None:intergenic | 55.0% | |
| CCGGTGTGTAAAGCTGAGGA+AGG | - | chr1.3:56564278-56564297 | MS.gene43945:CDS | 55.0% | |
| CGGAGAAAGGGTGGGAGAAA+TGG | - | chr1.3:56564366-56564385 | MS.gene43945:CDS | 55.0% | |
| GAAAGGGTGGGAGAAATGGG+TGG | - | chr1.3:56564370-56564389 | MS.gene43945:CDS | 55.0% | |
| GAAGAAACCACCGGCATCAC+CGG | - | chr1.3:56563729-56563748 | MS.gene43945:CDS | 55.0% | |
| GAGGTGAAAAGCCTTCACGG+AGG | + | chr1.3:56563701-56563720 | None:intergenic | 55.0% | |
| GCCGGTGGTTTCTTCAATGG+TGG | + | chr1.3:56563724-56563743 | None:intergenic | 55.0% | |
| GGGGGCCGGTGGTTAATTTA+GGG | - | chr1.3:56564405-56564424 | MS.gene43945:CDS | 55.0% | |
| GTGAAAAGCCTTCACGGAGG+AGG | + | chr1.3:56563698-56563717 | None:intergenic | 55.0% | |
| GTTGAGTGGGAAGGCTGAAG+AGG | - | chr1.3:56564163-56564182 | MS.gene43945:CDS | 55.0% | |
| TACGACAACCTCGACATCCC+AGG | - | chr1.3:56563609-56563628 | MS.gene43945:CDS | 55.0% | |
| TGCAGCAGCGCGTTTCATTG+TGG | - | chr1.3:56563899-56563918 | MS.gene43945:CDS | 55.0% | |
| TGGGGGCCGGTGGTTAATTT+AGG | - | chr1.3:56564404-56564423 | MS.gene43945:CDS | 55.0% | |
| !! | AATGGGTGGTGTTACCGGCT+TGG | - | chr1.3:56564384-56564403 | MS.gene43945:CDS | 55.0% |
| !! | ATGGGTGGTGTTACCGGCTT+GGG | - | chr1.3:56564385-56564404 | MS.gene43945:CDS | 55.0% |
| !! | GGTATTGTGGTGGCGGAGAA+AGG | - | chr1.3:56564353-56564372 | MS.gene43945:CDS | 55.0% |
| CGAGGATGTCGATGCGACCT+GGG | + | chr1.3:56563629-56563648 | None:intergenic | 60.0% | |
| CGGAGGAGGGAAGTGATGAG+AGG | + | chr1.3:56563684-56563703 | None:intergenic | 60.0% | |
| CTGTTCAACGCCGGTGATGC+CGG | + | chr1.3:56563742-56563761 | None:intergenic | 60.0% | |
| GACATCCTCGCCAACCGTCT+CGG | - | chr1.3:56563639-56563658 | MS.gene43945:CDS | 60.0% | |
| GAGTGGGAAGGCTGAAGAGG+AGG | - | chr1.3:56564166-56564185 | MS.gene43945:CDS | 60.0% | |
| TGGGAAGGCTGAAGAGGAGG+AGG | - | chr1.3:56564169-56564188 | MS.gene43945:CDS | 60.0% | |
| !! | GATGGGAGAGGTGTTGGTGG+TGG | + | chr1.3:56563585-56563604 | None:intergenic | 60.0% |
| !! | TGGGTGGTGTTACCGGCTTG+GGG | - | chr1.3:56564386-56564405 | MS.gene43945:CDS | 60.0% |
| !! | TGTGGTGGCGGAGAAAGGGT+GGG | - | chr1.3:56564358-56564377 | MS.gene43945:CDS | 60.0% |
| !! | TTGTGGTGGCGGAGAAAGGG+TGG | - | chr1.3:56564357-56564376 | MS.gene43945:CDS | 60.0% |
| ATGCACCGAGACGGTTGGCG+AGG | + | chr1.3:56563647-56563666 | None:intergenic | 65.0% | |
| CAGCGCGTTGCGAAGTGGAG+AGG | + | chr1.3:56563881-56563900 | None:intergenic | 65.0% | |
| CGATGCGACCTGGGATGTCG+AGG | + | chr1.3:56563620-56563639 | None:intergenic | 65.0% | |
| GCGAGGATGTCGATGCGACC+TGG | + | chr1.3:56563630-56563649 | None:intergenic | 65.0% | |
| GTGCCATGCACCGAGACGGT+TGG | + | chr1.3:56563652-56563671 | None:intergenic | 65.0% | |
| TGCTGCAGCGCGTTGCGAAG+TGG | + | chr1.3:56563886-56563905 | None:intergenic | 65.0% | |
| TTAACCACCGGCCCCCAAGC+CGG | + | chr1.3:56564401-56564420 | None:intergenic | 65.0% | |
| TTCAACGCCGGTGATGCCGG+TGG | + | chr1.3:56563739-56563758 | None:intergenic | 65.0% | |
| ! | TCGCCAACCGTCTCGGTGCA+TGG | - | chr1.3:56563646-56563665 | MS.gene43945:CDS | 65.0% |
| !! | AGGTGTTGGTGGTGGCCGGA+AGG | + | chr1.3:56563577-56563596 | None:intergenic | 65.0% |
| !! | GGAGAGGTGTTGGTGGTGGC+CGG | + | chr1.3:56563581-56563600 | None:intergenic | 65.0% |
| !! | GGGTGGTGTTACCGGCTTGG+GGG | - | chr1.3:56564387-56564406 | MS.gene43945:CDS | 65.0% |
| !! | GGTGTTGGTGGTGGCCGGAA+GGG | + | chr1.3:56563576-56563595 | None:intergenic | 65.0% |
| !! | TTGGTGGTGGCCGGAAGGGT+TGG | + | chr1.3:56563572-56563591 | None:intergenic | 65.0% |
| !! | GGTGTTACCGGCTTGGGGGC+CGG | - | chr1.3:56564391-56564410 | MS.gene43945:CDS | 70.0% |
| !! | GTTACCGGCTTGGGGGCCGG+TGG | - | chr1.3:56564394-56564413 | MS.gene43945:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 56563390 | 56564718 | 56563390 | ID=MS.gene43945 |
| chr1.3 | mRNA | 56563390 | 56564718 | 56563390 | ID=MS.gene43945.t1;Parent=MS.gene43945 |
| chr1.3 | exon | 56563390 | 56564718 | 56563390 | ID=MS.gene43945.t1.exon1;Parent=MS.gene43945.t1 |
| chr1.3 | CDS | 56563390 | 56564718 | 56563390 | ID=cds.MS.gene43945.t1;Parent=MS.gene43945.t1 |
| Gene Sequence |
| Protein sequence |
