Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49717.t1 | XP_003630360.1 | 98.7 | 609 | 8 | 0 | 1 | 609 | 1 | 609 | 0.00E+00 | 1232.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49717.t1 | Q7XJJ7 | 43.6 | 610 | 332 | 8 | 7 | 609 | 3 | 607 | 3.7e-135 | 483.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49717.t1 | G7LFP2 | 98.7 | 609 | 8 | 0 | 1 | 609 | 1 | 609 | 0.0e+00 | 1232.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene49717 | 0.8197 | 1.01E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene49717 | 0.814763 | 1.31E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene49717 | 0.825152 | 5.48E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene49717 | 0.808812 | 2.58E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene49717 | 0.817377 | 3.40E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene49717 | 0.818142 | 2.29E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene49717 | 0.809786 | 1.59E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene49717 | 0.845464 | 4.00E-59 | -1.69E-46 |
| MS.gene050380 | MS.gene49717 | -0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene050499 | MS.gene49717 | 0.815774 | 7.78E-52 | -1.69E-46 |
| MS.gene050520 | MS.gene49717 | 0.80606 | 9.88E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene49717 | 0.817379 | 3.40E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene49717 | 0.843316 | 1.51E-58 | -1.69E-46 |
| MS.gene050625 | MS.gene49717 | 0.804356 | 2.25E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene49717 | 0.846903 | 1.62E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene49717 | 0.86722 | 1.61E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene49717 | 0.807589 | 4.69E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene49717 | 0.858941 | 5.83E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene49717 | 0.819537 | 1.10E-52 | -1.69E-46 |
| MS.gene051255 | MS.gene49717 | 0.809736 | 1.63E-50 | -1.69E-46 |
| MS.gene051360 | MS.gene49717 | 0.821516 | 3.87E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene49717 | 0.882153 | 1.32E-70 | -1.69E-46 |
| MS.gene051525 | MS.gene49717 | 0.824222 | 9.07E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene49717 | 0.814454 | 1.53E-51 | -1.69E-46 |
| MS.gene051692 | MS.gene49717 | 0.814198 | 1.74E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene49717 | 0.843714 | 1.18E-58 | -1.69E-46 |
| MS.gene051877 | MS.gene49717 | 0.808176 | 3.52E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene49717 | 0.808715 | 2.70E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene49717 | 0.806058 | 9.89E-50 | -1.69E-46 |
| MS.gene052322 | MS.gene49717 | 0.800874 | 1.17E-48 | -1.69E-46 |
| MS.gene052414 | MS.gene49717 | 0.840602 | 7.88E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene49717 | 0.857016 | 2.17E-62 | -1.69E-46 |
| MS.gene052481 | MS.gene49717 | 0.820078 | 8.30E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene49717 | 0.829375 | 5.33E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene49717 | 0.841835 | 3.73E-58 | -1.69E-46 |
| MS.gene052501 | MS.gene49717 | 0.826943 | 2.06E-54 | -1.69E-46 |
| MS.gene052505 | MS.gene49717 | 0.826653 | 2.41E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene49717 | 0.813502 | 2.48E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene49717 | 0.837816 | 4.16E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene49717 | 0.818286 | 2.12E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene49717 | 0.815728 | 7.97E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene49717 | 0.806714 | 7.19E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene49717 | 0.816044 | 6.77E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene49717 | 0.825423 | 4.73E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene49717 | 0.83971 | 1.35E-57 | -1.69E-46 |
| MS.gene053758 | MS.gene49717 | 0.810265 | 1.26E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene49717 | 0.824758 | 6.79E-54 | -1.69E-46 |
| MS.gene054408 | MS.gene49717 | 0.816026 | 6.84E-52 | -1.69E-46 |
| MS.gene054920 | MS.gene49717 | 0.800218 | 1.60E-48 | -1.69E-46 |
| MS.gene054927 | MS.gene49717 | 0.84538 | 4.21E-59 | -1.69E-46 |
| MS.gene05505 | MS.gene49717 | 0.836618 | 8.42E-57 | -1.69E-46 |
| MS.gene055369 | MS.gene49717 | 0.813944 | 1.98E-51 | -1.69E-46 |
| MS.gene055412 | MS.gene49717 | 0.82 | 8.64E-53 | -1.69E-46 |
| MS.gene055486 | MS.gene49717 | 0.853662 | 2.06E-61 | -1.69E-46 |
| MS.gene055633 | MS.gene49717 | 0.802447 | 5.59E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene49717 | 0.804229 | 2.39E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene49717 | 0.84806 | 7.79E-60 | -1.69E-46 |
| MS.gene055911 | MS.gene49717 | 0.853466 | 2.35E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene49717 | 0.815569 | 8.65E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene49717 | 0.805534 | 1.27E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene49717 | 0.851887 | 6.62E-61 | -1.69E-46 |
| MS.gene056407 | MS.gene49717 | 0.801971 | 7.00E-49 | -1.69E-46 |
| MS.gene056410 | MS.gene49717 | 0.827926 | 1.19E-54 | -1.69E-46 |
| MS.gene056448 | MS.gene49717 | 0.814908 | 1.21E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene49717 | 0.839405 | 1.62E-57 | -1.69E-46 |
| MS.gene056514 | MS.gene49717 | 0.817118 | 3.89E-52 | -1.69E-46 |
| MS.gene056942 | MS.gene49717 | 0.827206 | 1.78E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene49717 | 0.829775 | 4.26E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene49717 | 0.823035 | 1.72E-53 | -1.69E-46 |
| MS.gene057146 | MS.gene49717 | 0.850692 | 1.44E-60 | -1.69E-46 |
| MS.gene057285 | MS.gene49717 | 0.826664 | 2.40E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene49717 | 0.831451 | 1.66E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene49717 | 0.814091 | 1.84E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene49717 | 0.822726 | 2.03E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene49717 | 0.836786 | 7.63E-57 | -1.69E-46 |
| MS.gene057856 | MS.gene49717 | 0.81961 | 1.06E-52 | -1.69E-46 |
| MS.gene058007 | MS.gene49717 | 0.845041 | 5.20E-59 | -1.69E-46 |
| MS.gene058019 | MS.gene49717 | 0.818238 | 2.18E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene49717 | 0.809152 | 2.18E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene49717 | 0.805655 | 1.20E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene49717 | 0.807107 | 5.94E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene49717 | 0.839097 | 1.94E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene49717 | 0.815079 | 1.11E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene49717 | 0.836085 | 1.15E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene49717 | 0.830791 | 2.41E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene49717 | 0.856732 | 2.64E-62 | -1.69E-46 |
| MS.gene058790 | MS.gene49717 | 0.802731 | 4.88E-49 | -1.69E-46 |
| MS.gene05883 | MS.gene49717 | 0.844039 | 9.68E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene49717 | 0.801432 | 9.03E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene49717 | 0.821035 | 5.00E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene49717 | 0.804953 | 1.69E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene49717 | 0.800146 | 1.65E-48 | -1.69E-46 |
| MS.gene05934 | MS.gene49717 | 0.815529 | 8.82E-52 | -1.69E-46 |
| MS.gene059368 | MS.gene49717 | 0.814327 | 1.63E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene49717 | 0.8366 | 8.51E-57 | -1.69E-46 |
| MS.gene059455 | MS.gene49717 | 0.805817 | 1.11E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene49717 | 0.84848 | 5.97E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene49717 | 0.817064 | 4.00E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene49717 | 0.837145 | 6.18E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene49717 | 0.808061 | 3.73E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene49717 | 0.813471 | 2.52E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene49717 | 0.826356 | 2.84E-54 | -1.69E-46 |
| MS.gene059749 | MS.gene49717 | 0.809269 | 2.06E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene49717 | 0.810708 | 1.01E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene49717 | 0.819671 | 1.03E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene49717 | 0.8215 | 3.91E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene49717 | 0.832452 | 9.38E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene49717 | 0.872034 | 4.33E-67 | -1.69E-46 |
| MS.gene06092 | MS.gene49717 | 0.833195 | 6.13E-56 | -1.69E-46 |
| MS.gene061154 | MS.gene49717 | 0.803578 | 3.26E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene49717 | 0.827963 | 1.17E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49717.t1 | MTR_8g094740 | 98.686 | 609 | 8 | 0 | 1 | 609 | 1 | 609 | 0.0 | 1250 |
| MS.gene49717.t1 | MTR_8g094740 | 98.324 | 537 | 9 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1100 |
| MS.gene49717.t1 | MTR_3g096980 | 78.254 | 607 | 131 | 1 | 1 | 607 | 1 | 606 | 0.0 | 984 |
| MS.gene49717.t1 | MTR_2g010180 | 42.200 | 609 | 342 | 6 | 7 | 609 | 3 | 607 | 2.71e-162 | 478 |
| MS.gene49717.t1 | MTR_2g010180 | 42.200 | 609 | 342 | 6 | 7 | 609 | 17 | 621 | 6.53e-162 | 477 |
| MS.gene49717.t1 | MTR_2g010180 | 42.496 | 593 | 330 | 7 | 7 | 593 | 3 | 590 | 7.14e-156 | 461 |
| MS.gene49717.t1 | MTR_3g048950 | 31.306 | 444 | 251 | 10 | 181 | 584 | 85 | 514 | 6.35e-42 | 159 |
| MS.gene49717.t1 | MTR_8g095600 | 24.655 | 507 | 298 | 17 | 119 | 601 | 147 | 593 | 1.11e-26 | 115 |
| MS.gene49717.t1 | MTR_8g095600 | 24.655 | 507 | 298 | 17 | 119 | 601 | 163 | 609 | 1.21e-26 | 115 |
| MS.gene49717.t1 | MTR_8g095600 | 25.325 | 462 | 271 | 16 | 119 | 566 | 147 | 548 | 2.68e-26 | 114 |
| MS.gene49717.t1 | MTR_1g082750 | 40.940 | 149 | 87 | 1 | 203 | 350 | 27 | 175 | 1.07e-25 | 110 |
| MS.gene49717.t1 | MTR_8g095600 | 29.851 | 268 | 174 | 7 | 119 | 384 | 147 | 402 | 3.45e-24 | 107 |
| MS.gene49717.t1 | MTR_4g074030 | 24.649 | 499 | 329 | 12 | 131 | 601 | 29 | 508 | 4.99e-23 | 103 |
| MS.gene49717.t1 | MTR_8g080870 | 25.536 | 513 | 305 | 20 | 128 | 599 | 3 | 479 | 5.57e-22 | 100 |
| MS.gene49717.t1 | MTR_4g094205 | 39.333 | 150 | 90 | 1 | 202 | 350 | 72 | 221 | 2.22e-21 | 99.0 |
| MS.gene49717.t1 | MTR_8g080840 | 29.297 | 256 | 164 | 6 | 117 | 365 | 26 | 271 | 5.27e-19 | 90.9 |
| MS.gene49717.t1 | MTR_8g080880 | 24.427 | 524 | 313 | 20 | 117 | 599 | 26 | 507 | 2.35e-18 | 89.0 |
| MS.gene49717.t1 | MTR_8g080890 | 26.848 | 257 | 176 | 5 | 116 | 365 | 21 | 272 | 6.78e-17 | 84.3 |
| MS.gene49717.t1 | MTR_8g097220 | 28.571 | 259 | 163 | 8 | 116 | 363 | 22 | 269 | 1.26e-16 | 83.6 |
| MS.gene49717.t1 | MTR_8g107280 | 35.664 | 143 | 91 | 1 | 209 | 350 | 69 | 211 | 1.91e-15 | 80.1 |
| MS.gene49717.t1 | MTR_8g107280 | 35.664 | 143 | 91 | 1 | 209 | 350 | 69 | 211 | 2.15e-15 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49717.t1 | AT5G64440 | 43.607 | 610 | 332 | 8 | 7 | 609 | 3 | 607 | 3.42e-166 | 488 |
| MS.gene49717.t1 | AT3G25660 | 28.177 | 543 | 323 | 16 | 102 | 599 | 11 | 531 | 3.66e-42 | 160 |
| MS.gene49717.t1 | AT5G07360 | 25.624 | 441 | 267 | 12 | 176 | 601 | 241 | 635 | 3.52e-25 | 110 |
| MS.gene49717.t1 | AT5G07360 | 25.624 | 441 | 267 | 12 | 176 | 601 | 241 | 635 | 3.52e-25 | 110 |
| MS.gene49717.t1 | AT1G08980 | 38.926 | 149 | 90 | 1 | 203 | 350 | 28 | 176 | 4.23e-22 | 99.8 |
| MS.gene49717.t1 | AT5G09420 | 34.975 | 203 | 120 | 4 | 203 | 396 | 71 | 270 | 6.76e-22 | 100 |
| MS.gene49717.t1 | AT5G07360 | 24.943 | 441 | 263 | 13 | 176 | 601 | 241 | 628 | 1.70e-20 | 96.3 |
| MS.gene49717.t1 | AT4G34880 | 27.075 | 506 | 301 | 17 | 131 | 602 | 39 | 510 | 6.36e-19 | 90.9 |
| MS.gene49717.t1 | AT3G17970 | 35.374 | 147 | 94 | 1 | 205 | 350 | 60 | 206 | 8.00e-18 | 87.4 |
| MS.gene49717.t1 | AT3G17970 | 35.374 | 147 | 94 | 1 | 205 | 350 | 60 | 206 | 1.17e-17 | 87.0 |
Find 153 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGTTGGCTATGATAAAT+TGG | 0.182422 | 4.4:-7909203 | MS.gene49717:intron |
| AGGCGCATCACTTCTATTTC+TGG | 0.191278 | 4.4:+7910339 | None:intergenic |
| TTCAGTCGTATACCTCATTC+TGG | 0.198376 | 4.4:-7911557 | MS.gene49717:CDS |
| TATCTCCAAGCCAATGTTAA+AGG | 0.203404 | 4.4:-7914287 | MS.gene49717:intron |
| GAAGGCTTTGTTCCATTAAT+TGG | 0.220387 | 4.4:+7913287 | None:intergenic |
| CCGATTGGTCTTCAGTTTAT+AGG | 0.231895 | 4.4:-7909175 | MS.gene49717:CDS |
| CTCTTGGAGTGTCGAATAAT+TGG | 0.241464 | 4.4:-7913882 | MS.gene49717:CDS |
| ACTTTACAAAGACCAATTAA+TGG | 0.252014 | 4.4:-7913299 | MS.gene49717:CDS |
| AGCGGTATAAATCCACATTA+TGG | 0.252464 | 4.4:-7912277 | MS.gene49717:CDS |
| CCTGTTGCACTTGGTGTTGA+TGG | 0.252653 | 4.4:-7912040 | MS.gene49717:CDS |
| AGAAGTTAAATCCCTGGATT+TGG | 0.297689 | 4.4:-7913372 | MS.gene49717:CDS |
| ATATTAAAGCTCAGAAAATT+AGG | 0.299893 | 4.4:-7910099 | MS.gene49717:intron |
| TTCAGTGCATCATCTTGAAT+TGG | 0.302063 | 4.4:+7909528 | None:intergenic |
| CTCAAAACCTACACTTCAAA+TGG | 0.320556 | 4.4:-7912934 | MS.gene49717:CDS |
| ATTGGTCTTTGTAAAGTTGT+AGG | 0.326582 | 4.4:+7913305 | None:intergenic |
| AACAAGCTCCAGGGTCATTA+TGG | 0.331195 | 4.4:-7910816 | MS.gene49717:CDS |
| AAAATCAAGTTGGCAAAGTA+TGG | 0.332059 | 4.4:-7911014 | MS.gene49717:CDS |
| TTCAGTTTATAGGAAGGCCT+TGG | 0.333182 | 4.4:-7909165 | MS.gene49717:CDS |
| CAAGATTGTCGCTTGGCTCT+TGG | 0.340554 | 4.4:-7913898 | MS.gene49717:CDS |
| TCAGAGTTATTCCTCTAAAC+TGG | 0.350064 | 4.4:-7911444 | MS.gene49717:intron |
| GCACTACCTGTAGTAGGATA+TGG | 0.351561 | 4.4:+7912519 | None:intergenic |
| ATACCAACTGTCCAGTTTAG+AGG | 0.360938 | 4.4:+7911433 | None:intergenic |
| TTAATTCAGCTGCACTTATT+CGG | 0.367490 | 4.4:-7909364 | MS.gene49717:intron |
| ATTTAATCGGTGGACCATAA+TGG | 0.369054 | 4.4:-7913264 | MS.gene49717:CDS |
| AGATAGAATTCAGTACTATC+AGG | 0.371476 | 4.4:+7914305 | None:intergenic |
| GAACAAAGCCTTCATTTAAT+CGG | 0.371810 | 4.4:-7913277 | MS.gene49717:CDS |
| GTCATTGTGTCACCAACAAC+AGG | 0.375005 | 4.4:-7909657 | MS.gene49717:CDS |
| TGAAGAAATTTAGCAGACTT+TGG | 0.375244 | 4.4:-7910175 | MS.gene49717:intron |
| AGCTCTGAAATAGTCCATTA+TGG | 0.384221 | 4.4:+7913250 | None:intergenic |
| TTTGATATTGACTTTGTTAA+GGG | 0.389430 | 4.4:+7911035 | None:intergenic |
| CTGTTGCACTTGGTGTTGAT+GGG | 0.394978 | 4.4:-7912039 | MS.gene49717:CDS |
| CATAATGCCAGTAGGATTGC+AGG | 0.396801 | 4.4:-7912109 | MS.gene49717:CDS |
| GCAGCACTTTGTGGTGTAGT+TGG | 0.398790 | 4.4:-7911593 | MS.gene49717:CDS |
| TCCACGCATGACTGGAATCT+TGG | 0.401729 | 4.4:-7913922 | MS.gene49717:CDS |
| ATTTCATCCTTGATAGCAAC+AGG | 0.402535 | 4.4:+7912552 | None:intergenic |
| CAGTGCTCTGAACAAGCTCC+AGG | 0.403136 | 4.4:-7910826 | MS.gene49717:CDS |
| ACTTCCTGCTGTCACTGTTC+CGG | 0.404436 | 4.4:-7909315 | MS.gene49717:intron |
| TCTGCCGCTGTGGTGTCGGC+AGG | 0.410259 | 4.4:-7912070 | MS.gene49717:CDS |
| CAGGTTGGCTATGATAAATT+GGG | 0.415411 | 4.4:-7909202 | MS.gene49717:CDS |
| GGGAAATAATCTTATTCATA+AGG | 0.416845 | 4.4:-7913835 | MS.gene49717:intron |
| CAAACCTTCAAAATGATGTA+AGG | 0.417619 | 4.4:+7913567 | None:intergenic |
| GATAAATTGGGTTTACCGAT+TGG | 0.417907 | 4.4:-7909190 | MS.gene49717:CDS |
| TTCCATAGCAGGAAACTTCC+TGG | 0.422960 | 4.4:-7909339 | MS.gene49717:CDS |
| ACTCCATCCAGCACAGATAT+AGG | 0.427034 | 4.4:+7912576 | None:intergenic |
| CCATCAACACCAAGTGCAAC+AGG | 0.433459 | 4.4:+7912040 | None:intergenic |
| CTAGCACATTATTCAACAAT+TGG | 0.435609 | 4.4:-7910318 | MS.gene49717:CDS |
| GCGGTATAAATCCACATTAT+GGG | 0.435704 | 4.4:-7912276 | MS.gene49717:intron |
| GAAATTTAGCAGACTTTGGA+TGG | 0.438159 | 4.4:-7910171 | MS.gene49717:CDS |
| TCTGTATTCTGACAAGCATA+TGG | 0.439273 | 4.4:+7908928 | None:intergenic |
| CCACTTGGCATTTGCAATGC+AGG | 0.439680 | 4.4:-7909125 | MS.gene49717:intron |
| ATGGCAAGTTGAACTTTGTC+TGG | 0.440183 | 4.4:+7913338 | None:intergenic |
| TCAGTGCATCATCTTGAATT+GGG | 0.443180 | 4.4:+7909529 | None:intergenic |
| TCAGTTTATAGGAAGGCCTT+GGG | 0.451477 | 4.4:-7909164 | MS.gene49717:CDS |
| AGTTGTAGGTAAGCAATCTA+TGG | 0.460678 | 4.4:+7913319 | None:intergenic |
| AGGGTAGCCCTTAAAATCTA+TGG | 0.467139 | 4.4:-7910142 | MS.gene49717:CDS |
| CTTATTCGGTATTCCATAGC+AGG | 0.473020 | 4.4:-7909350 | MS.gene49717:CDS |
| AAGAATCCCATTTGAAGTGT+AGG | 0.478977 | 4.4:+7912927 | None:intergenic |
| GGATTATGAACCTTTAACAT+TGG | 0.480761 | 4.4:+7914277 | None:intergenic |
| CAGCAGTGGAAGATTAATCT+TGG | 0.482282 | 4.4:+7911058 | None:intergenic |
| ATGAACCTTTAACATTGGCT+TGG | 0.484550 | 4.4:+7914282 | None:intergenic |
| GTGGAGTCAAAGCCAAATCC+AGG | 0.484798 | 4.4:+7913360 | None:intergenic |
| TGGAGTTCCTGTTGCTATCA+AGG | 0.485233 | 4.4:-7912559 | MS.gene49717:CDS |
| ATTAAACGTTTAAGATTATG+TGG | 0.487939 | 4.4:-7912349 | MS.gene49717:CDS |
| TCCCAGGAAGTTTCCTGCTA+TGG | 0.489592 | 4.4:+7909337 | None:intergenic |
| CTGGAGCTTGTTCAGAGCAC+TGG | 0.490184 | 4.4:+7910827 | None:intergenic |
| TATAGGAAGGCCTTGGGCTG+AGG | 0.494779 | 4.4:-7909158 | MS.gene49717:CDS |
| GGTCTTACAGGTATACTAGA+AGG | 0.500134 | 4.4:+7911245 | None:intergenic |
| TATTTCAGAGCTTACAGCTC+AGG | 0.500226 | 4.4:-7913239 | MS.gene49717:CDS |
| CCTATAAACTGAAGACCAAT+CGG | 0.500567 | 4.4:+7909175 | None:intergenic |
| TATGTGGTGCTGTACTTGTC+GGG | 0.503038 | 4.4:-7912333 | MS.gene49717:CDS |
| TCAGTCGTATACCTCATTCT+GGG | 0.509077 | 4.4:-7911556 | MS.gene49717:intron |
| GGGTTGTGTCCTGTTGCACT+TGG | 0.511449 | 4.4:-7912049 | MS.gene49717:CDS |
| TATATAGCTCCACGCATGAC+TGG | 0.511816 | 4.4:-7913930 | MS.gene49717:intron |
| ATGGTCCACCGATTAAATGA+AGG | 0.512833 | 4.4:+7913269 | None:intergenic |
| AGCTCCAGGGTCATTATGGT+TGG | 0.515079 | 4.4:-7910812 | MS.gene49717:CDS |
| TCTAAACTGGACAGTTGGTA+TGG | 0.515763 | 4.4:-7911431 | MS.gene49717:CDS |
| AGAACCTCCTGCAATCCTAC+TGG | 0.516769 | 4.4:+7912102 | None:intergenic |
| CCTGTGAAGGATGTCAATTT+AGG | 0.517477 | 4.4:-7914329 | MS.gene49717:CDS |
| CAGTGACAGCAGGAAGTCCC+AGG | 0.517637 | 4.4:+7909321 | None:intergenic |
| AACTGGACAGTTGGTATGGT+GGG | 0.517644 | 4.4:-7911427 | MS.gene49717:CDS |
| TTTCTATTGTATATATTGAA+GGG | 0.519697 | 4.4:-7913855 | MS.gene49717:CDS |
| CAAGATGATGCACTGAAGAC+TGG | 0.521085 | 4.4:-7909522 | MS.gene49717:CDS |
| TGTTTGCCATATCCTACTAC+AGG | 0.522224 | 4.4:-7912525 | MS.gene49717:intron |
| TCAAAACCTACACTTCAAAT+GGG | 0.524434 | 4.4:-7912933 | MS.gene49717:CDS |
| AGGAGAACCTATATCTGTGC+TGG | 0.524895 | 4.4:-7912583 | MS.gene49717:CDS |
| AAGCAAATGAATCAACTCTT+CGG | 0.527469 | 4.4:-7912872 | MS.gene49717:CDS |
| ATGATTTCTTACCCATAATG+TGG | 0.527681 | 4.4:+7912265 | None:intergenic |
| AGGATGCCTGCAGCACTTTG+TGG | 0.528920 | 4.4:-7911602 | MS.gene49717:CDS |
| TGGATCTGCCGCTGTGGTGT+CGG | 0.530561 | 4.4:-7912074 | MS.gene49717:CDS |
| TGATGTAAGGGAACATAAAG+AGG | 0.534602 | 4.4:+7913580 | None:intergenic |
| CAGACTTTGGATGGGATGCA+AGG | 0.535614 | 4.4:-7910162 | MS.gene49717:CDS |
| TCTTGGTCAAGATTGTCGCT+TGG | 0.536132 | 4.4:-7913905 | MS.gene49717:CDS |
| GCAATCCTACTGGCATTATG+TGG | 0.537383 | 4.4:+7912112 | None:intergenic |
| GACTTTGTTAAGGGCAGCAG+TGG | 0.539380 | 4.4:+7911044 | None:intergenic |
| GGTGAACTTGACTATGTCAA+TGG | 0.540783 | 4.4:-7909501 | MS.gene49717:CDS |
| AAGACTAATATGCATGAACT+TGG | 0.543227 | 4.4:-7912310 | MS.gene49717:CDS |
| TTATGTGGTGCTGTACTTGT+CGG | 0.544034 | 4.4:-7912334 | MS.gene49717:CDS |
| CCTAAATTGACATCCTTCAC+AGG | 0.545136 | 4.4:+7914329 | None:intergenic |
| AAACCTTCAAAATGATGTAA+GGG | 0.547435 | 4.4:+7913568 | None:intergenic |
| AATATGCATGAACTTGGAGC+TGG | 0.549159 | 4.4:-7912304 | MS.gene49717:CDS |
| CAACAAGCATCATCTGTACA+AGG | 0.558005 | 4.4:+7912373 | None:intergenic |
| ATCAATGTTGCCTCAGCCCA+AGG | 0.559021 | 4.4:+7909148 | None:intergenic |
| TCCATAGCAGGAAACTTCCT+GGG | 0.565982 | 4.4:-7909338 | MS.gene49717:CDS |
| CACCTTGCACTACCTGTAGT+AGG | 0.566644 | 4.4:+7912513 | None:intergenic |
| GTTGCACTTGGTGTTGATGG+GGG | 0.568029 | 4.4:-7912037 | MS.gene49717:CDS |
| CTGCCGCTGTGGTGTCGGCA+GGG | 0.571889 | 4.4:-7912069 | MS.gene49717:CDS |
| AAATTTAGCAGACTTTGGAT+GGG | 0.572870 | 4.4:-7910170 | MS.gene49717:CDS |
| ACTACACCACAAAGTGCTGC+AGG | 0.573330 | 4.4:+7911596 | None:intergenic |
| ATTCCTCTAAACTGGACAGT+TGG | 0.574544 | 4.4:-7911436 | MS.gene49717:CDS |
| TTGGTCTTCAGTTTATAGGA+AGG | 0.574624 | 4.4:-7909171 | MS.gene49717:CDS |
| GATAGAATTCAGTACTATCA+GGG | 0.575416 | 4.4:+7914306 | None:intergenic |
| TGTTGCACTTGGTGTTGATG+GGG | 0.576857 | 4.4:-7912038 | MS.gene49717:CDS |
| TCAACTCTTCGGTATCAGAA+AGG | 0.581140 | 4.4:-7912861 | MS.gene49717:intron |
| ATTGAATCTCACCCAGAATG+AGG | 0.581363 | 4.4:+7911545 | None:intergenic |
| GAACCTATATCTGTGCTGGA+TGG | 0.582594 | 4.4:-7912579 | MS.gene49717:CDS |
| ATACTAGAAGGCTGACGCGA+TGG | 0.583200 | 4.4:+7911257 | None:intergenic |
| TGAGGCAACATTGATCCACT+TGG | 0.585413 | 4.4:-7909140 | MS.gene49717:CDS |
| AGACTTTGGATGGGATGCAA+GGG | 0.586360 | 4.4:-7910161 | MS.gene49717:CDS |
| CAATTGTTGAATAATGTGCT+AGG | 0.588010 | 4.4:+7910319 | None:intergenic |
| CCAGGGTCATTATGGTTGGA+AGG | 0.592244 | 4.4:-7910808 | MS.gene49717:intron |
| AATGGGACAAACCCTGTTGT+TGG | 0.592859 | 4.4:+7909645 | None:intergenic |
| ATTGCAGGAGGTTCTTCTAG+TGG | 0.594246 | 4.4:-7912094 | MS.gene49717:CDS |
| CAAAGCCTTCATTTAATCGG+TGG | 0.595737 | 4.4:-7913274 | MS.gene49717:CDS |
| GGTATGGTGGGAATACTAGC+AGG | 0.598355 | 4.4:-7911415 | MS.gene49717:CDS |
| TACAGTTATGCAGCAATCAG+CGG | 0.598468 | 4.4:-7911287 | MS.gene49717:intron |
| CAAAGTGGCTGCACAAACAA+AGG | 0.602897 | 4.4:-7912396 | MS.gene49717:CDS |
| ACCAAGATTCCAGTCATGCG+TGG | 0.606578 | 4.4:+7913921 | None:intergenic |
| TTTGTTCAAAAGCAAACGTG+TGG | 0.608636 | 4.4:-7914360 | MS.gene49717:CDS |
| AAACTGGACAGTTGGTATGG+TGG | 0.613551 | 4.4:-7911428 | MS.gene49717:CDS |
| GCAAGTTGAACTTTGTCTGG+TGG | 0.616644 | 4.4:+7913341 | None:intergenic |
| TTCTAGTGGATCTGCCGCTG+TGG | 0.617673 | 4.4:-7912080 | MS.gene49717:CDS |
| CTATGGTGCATTCAGCAGCA+TGG | 0.618932 | 4.4:-7910125 | MS.gene49717:CDS |
| CCTGCATTGCAAATGCCAAG+TGG | 0.621300 | 4.4:+7909125 | None:intergenic |
| TGACACAATGACATCAGCCT+CGG | 0.628316 | 4.4:+7909668 | None:intergenic |
| AATACTAGCAGGCACTGTTG+AGG | 0.630155 | 4.4:-7911404 | MS.gene49717:CDS |
| TATACCGGAACAGTGACAGC+AGG | 0.630886 | 4.4:+7909311 | None:intergenic |
| AGTGCTCTGAACAAGCTCCA+GGG | 0.632077 | 4.4:-7910825 | MS.gene49717:CDS |
| GAACTTGGAGCTGGAACTAG+CGG | 0.632636 | 4.4:-7912295 | MS.gene49717:CDS |
| CCTTCCAACCATAATGACCC+TGG | 0.634205 | 4.4:+7910808 | None:intergenic |
| CAAGTTGGCAAAGTATGGCA+AGG | 0.636701 | 4.4:-7911009 | MS.gene49717:intron |
| GAAATCCACATAATGCCAGT+AGG | 0.637654 | 4.4:-7912117 | MS.gene49717:CDS |
| ATCCTCTAGGTGGTACAAAG+TGG | 0.640973 | 4.4:-7912411 | MS.gene49717:intron |
| TGAAATAGTAATACCATGTG+TGG | 0.663567 | 4.4:+7913206 | None:intergenic |
| TGTAAGGGAACATAAAGAGG+TGG | 0.667436 | 4.4:+7913583 | None:intergenic |
| AGGAGATATAACACCACACA+TGG | 0.672196 | 4.4:-7913219 | MS.gene49717:intron |
| TCATTGTGTCACCAACAACA+GGG | 0.674990 | 4.4:-7909656 | MS.gene49717:intron |
| TGGAGTCAAAGCCAAATCCA+GGG | 0.676439 | 4.4:+7913361 | None:intergenic |
| ATGCCTATCCAGGCTCTGTG+AGG | 0.678886 | 4.4:-7911622 | MS.gene49717:intron |
| TGAGGTATACGACTGAAAGT+CGG | 0.686779 | 4.4:+7911563 | None:intergenic |
| TGTGGTTTACAAGCCTGTGA+AGG | 0.696740 | 4.4:-7914342 | MS.gene49717:CDS |
| CAACCCTGCCGACACCACAG+CGG | 0.709893 | 4.4:+7912066 | None:intergenic |
| AATGCCAGTAGGATTGCAGG+AGG | 0.720435 | 4.4:-7912106 | MS.gene49717:CDS |
| GAACTTGACTATGTCAATGG+AGG | 0.732860 | 4.4:-7909498 | MS.gene49717:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTATAAAATATAATGAA+TGG | + | chr4.4:7911291-7911310 | None:intergenic | 10.0% |
| !! | GTAATAAATAATAAAAACAA+TGG | + | chr4.4:7909001-7909020 | None:intergenic | 10.0% |
| !! | TAAAAAAATGATTACAATTA+AGG | + | chr4.4:7914002-7914021 | None:intergenic | 10.0% |
| !! | TTGTTTATTCATATATATAT+TGG | - | chr4.4:7912306-7912325 | MS.gene49717:CDS | 10.0% |
| !! | AAAATAATGAATAAACTCAA+GGG | + | chr4.4:7913016-7913035 | None:intergenic | 15.0% |
| !! | AGAGATTAAAAAACATAAAT+TGG | - | chr4.4:7913442-7913461 | MS.gene49717:intron | 15.0% |
| !! | ATGATATTTGAATAATTTAG+TGG | - | chr4.4:7909819-7909838 | MS.gene49717:intron | 15.0% |
| !! | ATTTATATTTGTAGATGAAA+AGG | - | chr4.4:7911249-7911268 | MS.gene49717:intron | 15.0% |
| !! | TAAAATTTACTTACAATCAA+TGG | + | chr4.4:7909261-7909280 | None:intergenic | 15.0% |
| !! | TTTCTATTGTATATATTGAA+GGG | - | chr4.4:7909399-7909418 | MS.gene49717:intron | 15.0% |
| !!! | GTTTTTTTTGAAAAAGTTAA+TGG | + | chr4.4:7910131-7910150 | None:intergenic | 15.0% |
| !!! | TAACTTTTTCAAAAAAAACT+TGG | - | chr4.4:7910132-7910151 | MS.gene49717:CDS | 15.0% |
| !!! | TATTTTTAAACTGTAAGAAA+TGG | + | chr4.4:7909023-7909042 | None:intergenic | 15.0% |
| !!! | TTGTAATGATTTTAGAATAA+TGG | - | chr4.4:7911774-7911793 | MS.gene49717:intron | 15.0% |
| !!! | TTTTCTATTGTATATATTGA+AGG | - | chr4.4:7909398-7909417 | MS.gene49717:intron | 15.0% |
| !! | AGAATTAACACAAAAATGAT+AGG | + | chr4.4:7910105-7910124 | None:intergenic | 20.0% |
| !! | ATATTAAAGCTCAGAAAATT+AGG | - | chr4.4:7913155-7913174 | MS.gene49717:intron | 20.0% |
| !! | ATATTGTAGACTTAAATTTC+AGG | + | chr4.4:7911568-7911587 | None:intergenic | 20.0% |
| !! | ATTGCTACATCTTAAAATAT+AGG | + | chr4.4:7913655-7913674 | None:intergenic | 20.0% |
| !! | GAAAATAATGAATAAACTCA+AGG | + | chr4.4:7913017-7913036 | None:intergenic | 20.0% |
| !! | TACAAAATGTATAAAGTGAA+AGG | - | chr4.4:7913364-7913383 | MS.gene49717:CDS | 20.0% |
| !! | TATGCATTGAATATATTGAT+TGG | - | chr4.4:7912283-7912302 | MS.gene49717:CDS | 20.0% |
| !! | TCAAATTTCAAATACATAAC+TGG | + | chr4.4:7910774-7910793 | None:intergenic | 20.0% |
| !! | TGTTTATAAAGTCATACATA+TGG | + | chr4.4:7911392-7911411 | None:intergenic | 20.0% |
| !! | TTAATTAATCATGTGACTTT+AGG | - | chr4.4:7913468-7913487 | MS.gene49717:intron | 20.0% |
| !! | TTGTGTATTTAAACCAAAAT+TGG | + | chr4.4:7912876-7912895 | None:intergenic | 20.0% |
| !!! | AAACATTTTTAATGATATGG+CGG | - | chr4.4:7911427-7911446 | MS.gene49717:CDS | 20.0% |
| !!! | AATCATTTTTTTAGAGAACT+CGG | - | chr4.4:7914009-7914028 | MS.gene49717:intron | 20.0% |
| !!! | ATATTTTTACAACAACTTTG+TGG | - | chr4.4:7909536-7909555 | MS.gene49717:CDS | 20.0% |
| !!! | ATTAAACGTTTAAGATTATG+TGG | - | chr4.4:7910905-7910924 | MS.gene49717:intron | 20.0% |
| !!! | ATTTAACTTCTTTTTCATTG+TGG | + | chr4.4:7909873-7909892 | None:intergenic | 20.0% |
| !!! | CTAGTAAATTTTTTATTGAG+TGG | - | chr4.4:7914207-7914226 | MS.gene49717:intron | 20.0% |
| !!! | GTCAAACATTTTTAATGATA+TGG | - | chr4.4:7911424-7911443 | MS.gene49717:CDS | 20.0% |
| !!! | TCGTAAATTCATTTTATCTT+CGG | - | chr4.4:7910223-7910242 | MS.gene49717:intron | 20.0% |
| !!! | TTATTCATTATTTTCCTCTT+GGG | - | chr4.4:7913022-7913041 | MS.gene49717:intron | 20.0% |
| !!! | TTCATTAGTTTAAAGAGATA+AGG | + | chr4.4:7912153-7912172 | None:intergenic | 20.0% |
| !!! | TTTATTCATTATTTTCCTCT+TGG | - | chr4.4:7913021-7913040 | MS.gene49717:intron | 20.0% |
| !!! | TTTGATATTGACTTTGTTAA+GGG | + | chr4.4:7912222-7912241 | None:intergenic | 20.0% |
| !!! | TTTTGATATTGACTTTGTTA+AGG | + | chr4.4:7912223-7912242 | None:intergenic | 20.0% |
| ! | AAAAACATTTGCTCAGAATT+TGG | + | chr4.4:7909612-7909631 | None:intergenic | 25.0% |
| ! | AAACCTTCAAAATGATGTAA+GGG | + | chr4.4:7909689-7909708 | None:intergenic | 25.0% |
| ! | AACACAAAAATGATAGGATT+AGG | + | chr4.4:7910099-7910118 | None:intergenic | 25.0% |
| ! | AATAAGCTAAAAACAGCTTA+CGG | + | chr4.4:7912616-7912635 | None:intergenic | 25.0% |
| ! | AATGAATCATATCATGATCA+TGG | + | chr4.4:7909299-7909318 | None:intergenic | 25.0% |
| ! | ACCAAATATGTTCATATCAT+AGG | - | chr4.4:7911540-7911559 | MS.gene49717:intron | 25.0% |
| ! | ACCTATGATATGAACATATT+TGG | + | chr4.4:7911544-7911563 | None:intergenic | 25.0% |
| ! | ACTGCAAAATATTGTGAATA+TGG | - | chr4.4:7909733-7909752 | MS.gene49717:intron | 25.0% |
| ! | ACTTTACAAAGACCAATTAA+TGG | - | chr4.4:7909955-7909974 | MS.gene49717:intron | 25.0% |
| ! | ATAAAACATATAACCATGAG+TGG | + | chr4.4:7913523-7913542 | None:intergenic | 25.0% |
| ! | ATATGAAAAGTTTGATTGCA+AGG | + | chr4.4:7909518-7909537 | None:intergenic | 25.0% |
| ! | ATATTTCATATGTTGATGTG+TGG | - | chr4.4:7910588-7910607 | MS.gene49717:intron | 25.0% |
| ! | ATTATCAACTGAAAGATCTA+TGG | + | chr4.4:7910464-7910483 | None:intergenic | 25.0% |
| ! | CATGTTAAGTTTGAGAAAAT+GGG | + | chr4.4:7913629-7913648 | None:intergenic | 25.0% |
| ! | CTTCAAGTAAACTTTAACAT+TGG | - | chr4.4:7911917-7911936 | MS.gene49717:intron | 25.0% |
| ! | GAAGAAAAAATAGAACAGAA+AGG | + | chr4.4:7911901-7911920 | None:intergenic | 25.0% |
| ! | GGGAAATAATCTTATTCATA+AGG | - | chr4.4:7909419-7909438 | MS.gene49717:intron | 25.0% |
| ! | GTATATAGATTCAGTTTAAC+TGG | - | chr4.4:7913778-7913797 | MS.gene49717:intron | 25.0% |
| ! | GTCAATATCAAAAATCAAGT+TGG | - | chr4.4:7912230-7912249 | MS.gene49717:intron | 25.0% |
| ! | TAAATGACATAACTGAAGTT+AGG | + | chr4.4:7912346-7912365 | None:intergenic | 25.0% |
| ! | TAGGTATAGAATAGAGTAAA+GGG | + | chr4.4:7913334-7913353 | None:intergenic | 25.0% |
| ! | TATAAAGTCATACATATGGT+TGG | + | chr4.4:7911388-7911407 | None:intergenic | 25.0% |
| ! | TCATGTTAAGTTTGAGAAAA+TGG | + | chr4.4:7913630-7913649 | None:intergenic | 25.0% |
| ! | TTAGGTATAGAATAGAGTAA+AGG | + | chr4.4:7913335-7913354 | None:intergenic | 25.0% |
| !! | ACTTTAAGAGACTAATCATA+TGG | - | chr4.4:7909559-7909578 | MS.gene49717:intron | 25.0% |
| !! | ATTAGTTTAAAGAGATAAGG+AGG | + | chr4.4:7912150-7912169 | None:intergenic | 25.0% |
| !! | GTTATATGTTTTATGAACAC+AGG | - | chr4.4:7913529-7913548 | MS.gene49717:intron | 25.0% |
| !! | TATTCATTATTTTCCTCTTG+GGG | - | chr4.4:7913023-7913042 | MS.gene49717:intron | 25.0% |
| !!! | ATGGATATTATTTTTCTTGC+AGG | - | chr4.4:7909752-7909771 | MS.gene49717:intron | 25.0% |
| !!! | GTAAATTTTTTATTGAGTGG+TGG | - | chr4.4:7914210-7914229 | MS.gene49717:intron | 25.0% |
| AAACCTTAATAATCCACTCA+TGG | - | chr4.4:7913507-7913526 | MS.gene49717:intron | 30.0% | |
| AAATTTAGCAGACTTTGGAT+GGG | - | chr4.4:7913084-7913103 | MS.gene49717:intron | 30.0% | |
| AAGACTAATATGCATGAACT+TGG | - | chr4.4:7910944-7910963 | MS.gene49717:intron | 30.0% | |
| AAGCAAATGAATCAACTCTT+CGG | - | chr4.4:7910382-7910401 | MS.gene49717:intron | 30.0% | |
| AAGCTATCATGAAGAACTTA+TGG | + | chr4.4:7912640-7912659 | None:intergenic | 30.0% | |
| AAGTTGAATACAACATCTTC+TGG | + | chr4.4:7910551-7910570 | None:intergenic | 30.0% | |
| AATAAGTGCAGCTGAATTAA+TGG | + | chr4.4:7913890-7913909 | None:intergenic | 30.0% | |
| AATCAGTTGTCAAAATCACT+TGG | + | chr4.4:7912051-7912070 | None:intergenic | 30.0% | |
| ACTGTCAAAGAAGAATATAC+CGG | + | chr4.4:7913961-7913980 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCTAC+TGG | - | chr4.4:7912535-7912554 | MS.gene49717:CDS | 30.0% | |
| AGATAGAATTCAGTACTATC+AGG | + | chr4.4:7908952-7908971 | None:intergenic | 30.0% | |
| AGCAGATCATAAAAAATTGC+TGG | + | chr4.4:7914355-7914374 | None:intergenic | 30.0% | |
| AGTATCTTTATAAGCAGCTT+AGG | + | chr4.4:7913839-7913858 | None:intergenic | 30.0% | |
| ATGATTTCTTACCCATAATG+TGG | + | chr4.4:7910992-7911011 | None:intergenic | 30.0% | |
| ATTCAACTGTTTAACCAAAC+AGG | - | chr4.4:7912745-7912764 | MS.gene49717:intron | 30.0% | |
| ATTTGCTCAGAATTTGGAAA+AGG | + | chr4.4:7909606-7909625 | None:intergenic | 30.0% | |
| CAAACCTTCAAAATGATGTA+AGG | + | chr4.4:7909690-7909709 | None:intergenic | 30.0% | |
| CAATTGTTGAATAATGTGCT+AGG | + | chr4.4:7912938-7912957 | None:intergenic | 30.0% | |
| CACTCTGCTTAGAAAATAAA+AGG | + | chr4.4:7911510-7911529 | None:intergenic | 30.0% | |
| CCACTAATTGATGAAATTAG+TGG | + | chr4.4:7912370-7912389 | None:intergenic | 30.0% | |
| CCACTAATTTCATCAATTAG+TGG | - | chr4.4:7912367-7912386 | MS.gene49717:CDS | 30.0% | |
| CGAAACTTGTAATTGAAAAC+TGG | + | chr4.4:7909217-7909236 | None:intergenic | 30.0% | |
| CTAGCACATTATTCAACAAT+TGG | - | chr4.4:7912936-7912955 | MS.gene49717:CDS | 30.0% | |
| CTTCGAACAATAAAACATCA+TGG | + | chr4.4:7910180-7910199 | None:intergenic | 30.0% | |
| CTTGGAATTTGAAAAGAACA+AGG | + | chr4.4:7912033-7912052 | None:intergenic | 30.0% | |
| GAACAAAGCCTTCATTTAAT+CGG | - | chr4.4:7909977-7909996 | MS.gene49717:intron | 30.0% | |
| GACTTGAAGAAAGAATATCT+AGG | + | chr4.4:7910077-7910096 | None:intergenic | 30.0% | |
| GATAGAATTCAGTACTATCA+GGG | + | chr4.4:7908951-7908970 | None:intergenic | 30.0% | |
| GGATTATGAACCTTTAACAT+TGG | + | chr4.4:7908980-7908999 | None:intergenic | 30.0% | |
| GGCATATGCAAAGAAAATAT+TGG | + | chr4.4:7911617-7911636 | None:intergenic | 30.0% | |
| GTATTTAAACCAAAATTGGC+AGG | + | chr4.4:7912872-7912891 | None:intergenic | 30.0% | |
| GTCACACTGTAATATGTATT+AGG | + | chr4.4:7913699-7913718 | None:intergenic | 30.0% | |
| TAAGCTGCTTATAAAGATAC+TGG | - | chr4.4:7913838-7913857 | MS.gene49717:CDS | 30.0% | |
| TAATCACTTCACTCAATGAA+TGG | + | chr4.4:7912841-7912860 | None:intergenic | 30.0% | |
| TCAAAACCTACACTTCAAAT+GGG | - | chr4.4:7910321-7910340 | MS.gene49717:CDS | 30.0% | |
| TCATTAATATATAGCTGAGC+AGG | + | chr4.4:7911054-7911073 | None:intergenic | 30.0% | |
| TGAAAAAGAAGTTAAATCCC+TGG | - | chr4.4:7909876-7909895 | MS.gene49717:intron | 30.0% | |
| TGAAATAGTAATACCATGTG+TGG | + | chr4.4:7910051-7910070 | None:intergenic | 30.0% | |
| TGAAGAAATTTAGCAGACTT+TGG | - | chr4.4:7913079-7913098 | MS.gene49717:intron | 30.0% | |
| TGATGTGAAAAATTAGACCA+AGG | - | chr4.4:7913206-7913225 | MS.gene49717:intron | 30.0% | |
| TGTTAGTACTCACTCAAATT+AGG | + | chr4.4:7914282-7914301 | None:intergenic | 30.0% | |
| TTAATTCAGCTGCACTTATT+CGG | - | chr4.4:7913890-7913909 | MS.gene49717:CDS | 30.0% | |
| TTGAAGAAAGAATATCTAGG+AGG | + | chr4.4:7910074-7910093 | None:intergenic | 30.0% | |
| TTGAGTGAGTACTAACATTA+TGG | - | chr4.4:7914285-7914304 | MS.gene49717:intron | 30.0% | |
| ! | AAACTGCATTTTATTGAGTG+TGG | + | chr4.4:7914240-7914259 | None:intergenic | 30.0% |
| ! | CAGGTTTAAAATTGTCTAGT+AGG | + | chr4.4:7913304-7913323 | None:intergenic | 30.0% |
| ! | CATAAATTTTCTGAACTCCT+TGG | + | chr4.4:7913226-7913245 | None:intergenic | 30.0% |
| ! | CATTTTGTATGTGTGTGTTT+AGG | + | chr4.4:7913353-7913372 | None:intergenic | 30.0% |
| ! | CTTGAGTTCTGATACTAATT+TGG | - | chr4.4:7910632-7910651 | MS.gene49717:intron | 30.0% |
| ! | GAATGCACCATAGATTTTAA+GGG | + | chr4.4:7913122-7913141 | None:intergenic | 30.0% |
| ! | GTCATGCTGATATATACTTT+TGG | - | chr4.4:7911740-7911759 | MS.gene49717:intron | 30.0% |
| ! | TCACAAGAAAATATTTTCCG+AGG | - | chr4.4:7913569-7913588 | MS.gene49717:intron | 30.0% |
| ! | TGAATGCACCATAGATTTTA+AGG | + | chr4.4:7913123-7913142 | None:intergenic | 30.0% |
| ! | TTTTCTTGTGAAACTGCAAT+TGG | + | chr4.4:7913560-7913579 | None:intergenic | 30.0% |
| !! | AAAATCAAGTTGGCAAAGTA+TGG | - | chr4.4:7912240-7912259 | MS.gene49717:intron | 30.0% |
| !! | AATGTTTTGAGCAATACCTT+AGG | - | chr4.4:7912173-7912192 | MS.gene49717:intron | 30.0% |
| !! | AGATGTAGCAATCTTTTTCA+TGG | - | chr4.4:7913663-7913682 | MS.gene49717:intron | 30.0% |
| !! | ATTGGTCTTTGTAAAGTTGT+AGG | + | chr4.4:7909952-7909971 | None:intergenic | 30.0% |
| !! | GATGTAGCAATCTTTTTCAT+GGG | - | chr4.4:7913664-7913683 | MS.gene49717:intron | 30.0% |
| !! | TAACCATGAGTGGATTATTA+AGG | + | chr4.4:7913513-7913532 | None:intergenic | 30.0% |
| AGAAGTTAAATCCCTGGATT+TGG | - | chr4.4:7909882-7909901 | MS.gene49717:intron | 35.0% | |
| AGCGGTATAAATCCACATTA+TGG | - | chr4.4:7910977-7910996 | MS.gene49717:intron | 35.0% | |
| AGTAATTATAACTCCCCAAG+AGG | + | chr4.4:7913039-7913058 | None:intergenic | 35.0% | |
| AGTCTGCTAAATTTCTTCAG+TGG | + | chr4.4:7913078-7913097 | None:intergenic | 35.0% | |
| AGTTGTAGGTAAGCAATCTA+TGG | + | chr4.4:7909938-7909957 | None:intergenic | 35.0% | |
| AGTTTAAAGAGATAAGGAGG+AGG | + | chr4.4:7912147-7912166 | None:intergenic | 35.0% | |
| ATTTAATCGGTGGACCATAA+TGG | - | chr4.4:7909990-7910009 | MS.gene49717:intron | 35.0% | |
| CCTATAAACTGAAGACCAAT+CGG | + | chr4.4:7914082-7914101 | None:intergenic | 35.0% | |
| CTCAAAACCTACACTTCAAA+TGG | - | chr4.4:7910320-7910339 | MS.gene49717:CDS | 35.0% | |
| CTGTTTATTTACACTCCACA+GGG | - | chr4.4:7911108-7911127 | MS.gene49717:intron | 35.0% | |
| GAAATTTAGCAGACTTTGGA+TGG | - | chr4.4:7913083-7913102 | MS.gene49717:intron | 35.0% | |
| GAATTCTTCTTCGTTTGAAC+AGG | - | chr4.4:7910263-7910282 | MS.gene49717:intron | 35.0% | |
| GATAAATTGGGTTTACCGAT+TGG | - | chr4.4:7914064-7914083 | MS.gene49717:intron | 35.0% | |
| GCGGTATAAATCCACATTAT+GGG | - | chr4.4:7910978-7910997 | MS.gene49717:intron | 35.0% | |
| GGGTACTCTCACTATAAATA+TGG | + | chr4.4:7913812-7913831 | None:intergenic | 35.0% | |
| GTCTTTAAATGGTATCCTCT+AGG | - | chr4.4:7910830-7910849 | MS.gene49717:CDS | 35.0% | |
| TAATCACATGTGAGACTGTT+CGG | - | chr4.4:7912560-7912579 | MS.gene49717:CDS | 35.0% | |
| TAGTATCAGAACTCAAGAGA+GGG | + | chr4.4:7910629-7910648 | None:intergenic | 35.0% | |
| TATCTCCAAGCCAATGTTAA+AGG | - | chr4.4:7908967-7908986 | MS.gene49717:intron | 35.0% | |
| TCAGAGTTATTCCTCTAAAC+TGG | - | chr4.4:7911810-7911829 | MS.gene49717:intron | 35.0% | |
| TCAGTGCATCATCTTGAATT+GGG | + | chr4.4:7913728-7913747 | None:intergenic | 35.0% | |
| TCTATCATCCTTTATCACAC+AGG | - | chr4.4:7914033-7914052 | MS.gene49717:intron | 35.0% | |
| TCTGTATTCTGACAAGCATA+TGG | + | chr4.4:7914329-7914348 | None:intergenic | 35.0% | |
| TGAAAAGAACAAGGTCTTAC+AGG | + | chr4.4:7912024-7912043 | None:intergenic | 35.0% | |
| TGATGTAAGGGAACATAAAG+AGG | + | chr4.4:7909677-7909696 | None:intergenic | 35.0% | |
| TTAGTATCAGAACTCAAGAG+AGG | + | chr4.4:7910630-7910649 | None:intergenic | 35.0% | |
| TTATAAGCAGCTTAGGCTTA+GGG | + | chr4.4:7913832-7913851 | None:intergenic | 35.0% | |
| TTCAGTGCATCATCTTGAAT+TGG | + | chr4.4:7913729-7913748 | None:intergenic | 35.0% | |
| TTGAGTATGACATGAAAGCA+TGG | - | chr4.4:7909048-7909067 | MS.gene49717:intron | 35.0% | |
| TTTAAATGGTATCCTCTAGG+TGG | - | chr4.4:7910833-7910852 | MS.gene49717:CDS | 35.0% | |
| TTTATAAGCAGCTTAGGCTT+AGG | + | chr4.4:7913833-7913852 | None:intergenic | 35.0% | |
| TTTGTTCAAAAGCAAACGTG+TGG | - | chr4.4:7908894-7908913 | MS.gene49717:CDS | 35.0% | |
| ! | AAGAATCCCATTTGAAGTGT+AGG | + | chr4.4:7910330-7910349 | None:intergenic | 35.0% |
| ! | ACAGGTTGGCTATGATAAAT+TGG | - | chr4.4:7914051-7914070 | MS.gene49717:intron | 35.0% |
| ! | ACTTACTAACCTGCCAATTT+TGG | - | chr4.4:7912860-7912879 | MS.gene49717:intron | 35.0% |
| ! | ATGAACCTTTAACATTGGCT+TGG | + | chr4.4:7908975-7908994 | None:intergenic | 35.0% |
| ! | ATGTCGTAAGCTATTTCCAT+AGG | + | chr4.4:7912591-7912610 | None:intergenic | 35.0% |
| ! | ATTTCATCCTTGATAGCAAC+AGG | + | chr4.4:7910705-7910724 | None:intergenic | 35.0% |
| ! | CAGGTTGGCTATGATAAATT+GGG | - | chr4.4:7914052-7914071 | MS.gene49717:intron | 35.0% |
| ! | GTTCCCTTACATCATTTTGA+AGG | - | chr4.4:7909683-7909702 | MS.gene49717:CDS | 35.0% |
| ! | TATGACATGAAAGCATGGTA+TGG | - | chr4.4:7909053-7909072 | MS.gene49717:intron | 35.0% |
| ! | TTGGTCTTCAGTTTATAGGA+AGG | - | chr4.4:7914083-7914102 | MS.gene49717:intron | 35.0% |
| !! | AGCTCTGAAATAGTCCATTA+TGG | + | chr4.4:7910007-7910026 | None:intergenic | 35.0% |
| !! | CATTTGAAGTGTAGGTTTTG+AGG | + | chr4.4:7910322-7910341 | None:intergenic | 35.0% |
| !! | GAAGGCTTTGTTCCATTAAT+TGG | + | chr4.4:7909970-7909989 | None:intergenic | 35.0% |
| !! | TTGACTTGCACGTCTTTAAA+TGG | - | chr4.4:7910819-7910838 | MS.gene49717:CDS | 35.0% |
| !!! | TTGGTGCATGTTGTTTTTGT+AGG | - | chr4.4:7910651-7910670 | MS.gene49717:intron | 35.0% |
| AATATGCATGAACTTGGAGC+TGG | - | chr4.4:7910950-7910969 | MS.gene49717:intron | 40.0% | |
| AGGAGATATAACACCACACA+TGG | - | chr4.4:7910035-7910054 | MS.gene49717:intron | 40.0% | |
| AGGGTAGCCCTTAAAATCTA+TGG | - | chr4.4:7913112-7913131 | MS.gene49717:intron | 40.0% | |
| ATACCAACTGTCCAGTTTAG+AGG | + | chr4.4:7911824-7911843 | None:intergenic | 40.0% | |
| ATAGCCAACCTGTGTGATAA+AGG | + | chr4.4:7914044-7914063 | None:intergenic | 40.0% | |
| ATCAGCTGATGACAAGAGTT+TGG | - | chr4.4:7911085-7911104 | MS.gene49717:intron | 40.0% | |
| ATTCCTCTAAACTGGACAGT+TGG | - | chr4.4:7911818-7911837 | MS.gene49717:intron | 40.0% | |
| ATTGAATCTCACCCAGAATG+AGG | + | chr4.4:7911712-7911731 | None:intergenic | 40.0% | |
| CAAAGCCTTCATTTAATCGG+TGG | - | chr4.4:7909980-7909999 | MS.gene49717:intron | 40.0% | |
| CAACAAGCATCATCTGTACA+AGG | + | chr4.4:7910884-7910903 | None:intergenic | 40.0% | |
| CAGCAGTGGAAGATTAATCT+TGG | + | chr4.4:7912199-7912218 | None:intergenic | 40.0% | |
| CCTAAATTGACATCCTTCAC+AGG | + | chr4.4:7908928-7908947 | None:intergenic | 40.0% | |
| CCTGTGAAGGATGTCAATTT+AGG | - | chr4.4:7908925-7908944 | MS.gene49717:CDS | 40.0% | |
| CTTATTCGGTATTCCATAGC+AGG | - | chr4.4:7913904-7913923 | MS.gene49717:CDS | 40.0% | |
| GAAATCCACATAATGCCAGT+AGG | - | chr4.4:7911137-7911156 | MS.gene49717:intron | 40.0% | |
| GAACTTGACTATGTCAATGG+AGG | - | chr4.4:7913756-7913775 | MS.gene49717:intron | 40.0% | |
| GCTGTTTATTTACACTCCAC+AGG | - | chr4.4:7911107-7911126 | MS.gene49717:intron | 40.0% | |
| GGAAGATTAATCTTGGCCTA+AGG | + | chr4.4:7912192-7912211 | None:intergenic | 40.0% | |
| GGTCTTACAGGTATACTAGA+AGG | + | chr4.4:7912012-7912031 | None:intergenic | 40.0% | |
| GGTGAACTTGACTATGTCAA+TGG | - | chr4.4:7913753-7913772 | MS.gene49717:intron | 40.0% | |
| TACAGTTATGCAGCAATCAG+CGG | - | chr4.4:7911967-7911986 | MS.gene49717:intron | 40.0% | |
| TATTTCAGAGCTTACAGCTC+AGG | - | chr4.4:7910015-7910034 | MS.gene49717:intron | 40.0% | |
| TCAACTCTTCGGTATCAGAA+AGG | - | chr4.4:7910393-7910412 | MS.gene49717:intron | 40.0% | |
| TCAGTCGTATACCTCATTCT+GGG | - | chr4.4:7911698-7911717 | MS.gene49717:intron | 40.0% | |
| TCAGTTTATAGGAAGGCCTT+GGG | - | chr4.4:7914090-7914109 | MS.gene49717:intron | 40.0% | |
| TCATCCTTTATCACACAGGT+TGG | - | chr4.4:7914037-7914056 | MS.gene49717:intron | 40.0% | |
| TCATTGTGTCACCAACAACA+GGG | - | chr4.4:7913598-7913617 | MS.gene49717:CDS | 40.0% | |
| TGAGGTATACGACTGAAAGT+CGG | + | chr4.4:7911694-7911713 | None:intergenic | 40.0% | |
| TGTAAGGGAACATAAAGAGG+TGG | + | chr4.4:7909674-7909693 | None:intergenic | 40.0% | |
| TGTTTGCCATATCCTACTAC+AGG | - | chr4.4:7910729-7910748 | MS.gene49717:intron | 40.0% | |
| TTCAGTCGTATACCTCATTC+TGG | - | chr4.4:7911697-7911716 | MS.gene49717:intron | 40.0% | |
| TTCAGTTTATAGGAAGGCCT+TGG | - | chr4.4:7914089-7914108 | MS.gene49717:intron | 40.0% | |
| TTCTTTGCATATGCCTATCC+AGG | - | chr4.4:7911622-7911641 | MS.gene49717:intron | 40.0% | |
| ! | ATGGCAAGTTGAACTTTGTC+TGG | + | chr4.4:7909919-7909938 | None:intergenic | 40.0% |
| ! | ATGGTCCACCGATTAAATGA+AGG | + | chr4.4:7909988-7910007 | None:intergenic | 40.0% |
| ! | GTCTAGTAGTCTTACCTGTT+TGG | + | chr4.4:7912762-7912781 | None:intergenic | 40.0% |
| ! | TCTAAACTGGACAGTTGGTA+TGG | - | chr4.4:7911823-7911842 | MS.gene49717:intron | 40.0% |
| !! | CCGATTGGTCTTCAGTTTAT+AGG | - | chr4.4:7914079-7914098 | MS.gene49717:intron | 40.0% |
| !! | CTCTTGGAGTGTCGAATAAT+TGG | - | chr4.4:7909372-7909391 | MS.gene49717:intron | 40.0% |
| !! | GATCTATGGTTTTGCAAGAG+AGG | + | chr4.4:7910450-7910469 | None:intergenic | 40.0% |
| !! | TTATGTGGTGCTGTACTTGT+CGG | - | chr4.4:7910920-7910939 | MS.gene49717:intron | 40.0% |
| AACAAGCTCCAGGGTCATTA+TGG | - | chr4.4:7912438-7912457 | MS.gene49717:intron | 45.0% | |
| AATGGGACAAACCCTGTTGT+TGG | + | chr4.4:7913612-7913631 | None:intergenic | 45.0% | |
| ACTCCATCCAGCACAGATAT+AGG | + | chr4.4:7910681-7910700 | None:intergenic | 45.0% | |
| AGACTGTTCGGAAGAACCTA+TGG | - | chr4.4:7912572-7912591 | MS.gene49717:CDS | 45.0% | |
| AGACTTTGGATGGGATGCAA+GGG | - | chr4.4:7913093-7913112 | MS.gene49717:intron | 45.0% | |
| AGGAGAACCTATATCTGTGC+TGG | - | chr4.4:7910671-7910690 | MS.gene49717:intron | 45.0% | |
| AGGCGCATCACTTCTATTTC+TGG | + | chr4.4:7912918-7912937 | None:intergenic | 45.0% | |
| ATCCTACTACAGGTAGTGCA+AGG | - | chr4.4:7910739-7910758 | MS.gene49717:intron | 45.0% | |
| ATCCTCTAGGTGGTACAAAG+TGG | - | chr4.4:7910843-7910862 | MS.gene49717:CDS | 45.0% | |
| ATTGCAGGAGGTTCTTCTAG+TGG | - | chr4.4:7911160-7911179 | MS.gene49717:intron | 45.0% | |
| CAAAGTGGCTGCACAAACAA+AGG | - | chr4.4:7910858-7910877 | MS.gene49717:CDS | 45.0% | |
| CAAGATGATGCACTGAAGAC+TGG | - | chr4.4:7913732-7913751 | MS.gene49717:intron | 45.0% | |
| CATAATGCCAGTAGGATTGC+AGG | - | chr4.4:7911145-7911164 | MS.gene49717:intron | 45.0% | |
| GAACCTATATCTGTGCTGGA+TGG | - | chr4.4:7910675-7910694 | MS.gene49717:intron | 45.0% | |
| GCAATCCTACTGGCATTATG+TGG | + | chr4.4:7911145-7911164 | None:intergenic | 45.0% | |
| GCACTACCTGTAGTAGGATA+TGG | + | chr4.4:7910738-7910757 | None:intergenic | 45.0% | |
| GTCATTGTGTCACCAACAAC+AGG | - | chr4.4:7913597-7913616 | MS.gene49717:CDS | 45.0% | |
| TACTGAAACTCCTCTGCATC+TGG | + | chr4.4:7909145-7909164 | None:intergenic | 45.0% | |
| TATATAGCTCCACGCATGAC+TGG | - | chr4.4:7909324-7909343 | MS.gene49717:CDS | 45.0% | |
| TCCATAGCAGGAAACTTCCT+GGG | - | chr4.4:7913916-7913935 | MS.gene49717:CDS | 45.0% | |
| TCTTGGTCAAGATTGTCGCT+TGG | - | chr4.4:7909349-7909368 | MS.gene49717:CDS | 45.0% | |
| TGACACAATGACATCAGCCT+CGG | + | chr4.4:7913589-7913608 | None:intergenic | 45.0% | |
| TGAGGCAACATTGATCCACT+TGG | - | chr4.4:7914114-7914133 | MS.gene49717:intron | 45.0% | |
| TGGAGTCAAAGCCAAATCCA+GGG | + | chr4.4:7909896-7909915 | None:intergenic | 45.0% | |
| TGGAGTTCCTGTTGCTATCA+AGG | - | chr4.4:7910695-7910714 | MS.gene49717:intron | 45.0% | |
| TGTGGTTTACAAGCCTGTGA+AGG | - | chr4.4:7908912-7908931 | MS.gene49717:CDS | 45.0% | |
| TTCCATAGCAGGAAACTTCC+TGG | - | chr4.4:7913915-7913934 | MS.gene49717:CDS | 45.0% | |
| ! | AAACTGGACAGTTGGTATGG+TGG | - | chr4.4:7911826-7911845 | MS.gene49717:intron | 45.0% |
| ! | AACTGGACAGTTGGTATGGT+GGG | - | chr4.4:7911827-7911846 | MS.gene49717:intron | 45.0% |
| ! | AATACTAGCAGGCACTGTTG+AGG | - | chr4.4:7911850-7911869 | MS.gene49717:intron | 45.0% |
| ! | CAAGTTGGCAAAGTATGGCA+AGG | - | chr4.4:7912245-7912264 | MS.gene49717:intron | 45.0% |
| ! | GCAAGTTGAACTTTGTCTGG+TGG | + | chr4.4:7909916-7909935 | None:intergenic | 45.0% |
| ! | TAGAGTAAAGGGAAGAGTGC+AGG | + | chr4.4:7913323-7913342 | None:intergenic | 45.0% |
| !! | CTGTTGCACTTGGTGTTGAT+GGG | - | chr4.4:7911215-7911234 | MS.gene49717:intron | 45.0% |
| !! | TATGTGGTGCTGTACTTGTC+GGG | - | chr4.4:7910921-7910940 | MS.gene49717:intron | 45.0% |
| !! | TGTTGCACTTGGTGTTGATG+GGG | - | chr4.4:7911216-7911235 | MS.gene49717:intron | 45.0% |
| AATGCCAGTAGGATTGCAGG+AGG | - | chr4.4:7911148-7911167 | MS.gene49717:intron | 50.0% | |
| ACCAAGATTCCAGTCATGCG+TGG | + | chr4.4:7909336-7909355 | None:intergenic | 50.0% | |
| ACTTCCTGCTGTCACTGTTC+CGG | - | chr4.4:7913939-7913958 | MS.gene49717:intron | 50.0% | |
| AGAACCTCCTGCAATCCTAC+TGG | + | chr4.4:7911155-7911174 | None:intergenic | 50.0% | |
| AGCTCCAGGGTCATTATGGT+TGG | - | chr4.4:7912442-7912461 | MS.gene49717:intron | 50.0% | |
| ATACTAGAAGGCTGACGCGA+TGG | + | chr4.4:7912000-7912019 | None:intergenic | 50.0% | |
| ATCAATGTTGCCTCAGCCCA+AGG | + | chr4.4:7914109-7914128 | None:intergenic | 50.0% | |
| CACCTTGCACTACCTGTAGT+AGG | + | chr4.4:7910744-7910763 | None:intergenic | 50.0% | |
| CAGACTTTGGATGGGATGCA+AGG | - | chr4.4:7913092-7913111 | MS.gene49717:intron | 50.0% | |
| CCACTTGGCATTTGCAATGC+AGG | - | chr4.4:7914129-7914148 | MS.gene49717:intron | 50.0% | |
| CCAGGGTCATTATGGTTGGA+AGG | - | chr4.4:7912446-7912465 | MS.gene49717:intron | 50.0% | |
| CCATCAACACCAAGTGCAAC+AGG | + | chr4.4:7911217-7911236 | None:intergenic | 50.0% | |
| CCTGCATTGCAAATGCCAAG+TGG | + | chr4.4:7914132-7914151 | None:intergenic | 50.0% | |
| CCTTCCAACCATAATGACCC+TGG | + | chr4.4:7912449-7912468 | None:intergenic | 50.0% | |
| CTATGGTGCATTCAGCAGCA+TGG | - | chr4.4:7913129-7913148 | MS.gene49717:intron | 50.0% | |
| GAACTTGGAGCTGGAACTAG+CGG | - | chr4.4:7910959-7910978 | MS.gene49717:intron | 50.0% | |
| GACTTTGTTAAGGGCAGCAG+TGG | + | chr4.4:7912213-7912232 | None:intergenic | 50.0% | |
| GCAGCACTTTGTGGTGTAGT+TGG | - | chr4.4:7911661-7911680 | MS.gene49717:intron | 50.0% | |
| GTGGAGTCAAAGCCAAATCC+AGG | + | chr4.4:7909897-7909916 | None:intergenic | 50.0% | |
| GTGGATTTCTTGTAGCCCTG+TGG | + | chr4.4:7911126-7911145 | None:intergenic | 50.0% | |
| TATACCGGAACAGTGACAGC+AGG | + | chr4.4:7913946-7913965 | None:intergenic | 50.0% | |
| TCCACGCATGACTGGAATCT+TGG | - | chr4.4:7909332-7909351 | MS.gene49717:CDS | 50.0% | |
| TCCCAGGAAGTTTCCTGCTA+TGG | + | chr4.4:7913920-7913939 | None:intergenic | 50.0% | |
| TGAAACTCCTCTGCATCTGG+CGG | + | chr4.4:7909142-7909161 | None:intergenic | 50.0% | |
| ! | AGCCACTTTGTACCACCTAG+AGG | + | chr4.4:7910848-7910867 | None:intergenic | 50.0% |
| ! | AGTGCTCTGAACAAGCTCCA+GGG | - | chr4.4:7912429-7912448 | MS.gene49717:intron | 50.0% |
| ! | CAAGATTGTCGCTTGGCTCT+TGG | - | chr4.4:7909356-7909375 | MS.gene49717:CDS | 50.0% |
| ! | GGTATGGTGGGAATACTAGC+AGG | - | chr4.4:7911839-7911858 | MS.gene49717:intron | 50.0% |
| !! | ACTACACCACAAAGTGCTGC+AGG | + | chr4.4:7911661-7911680 | None:intergenic | 50.0% |
| !! | CCTGTTGCACTTGGTGTTGA+TGG | - | chr4.4:7911214-7911233 | MS.gene49717:intron | 50.0% |
| !! | GTTGCACTTGGTGTTGATGG+GGG | - | chr4.4:7911217-7911236 | MS.gene49717:intron | 50.0% |
| AGGATGCCTGCAGCACTTTG+TGG | - | chr4.4:7911652-7911671 | MS.gene49717:intron | 55.0% | |
| ATGCCTATCCAGGCTCTGTG+AGG | - | chr4.4:7911632-7911651 | MS.gene49717:intron | 55.0% | |
| CATCCTCACAGAGCCTGGAT+AGG | + | chr4.4:7911638-7911657 | None:intergenic | 55.0% | |
| GGGTTGTGTCCTGTTGCACT+TGG | - | chr4.4:7911205-7911224 | MS.gene49717:intron | 55.0% | |
| TATAGGAAGGCCTTGGGCTG+AGG | - | chr4.4:7914096-7914115 | MS.gene49717:intron | 55.0% | |
| TCTGTATCCGCCAGATGCAG+AGG | - | chr4.4:7909132-7909151 | MS.gene49717:CDS | 55.0% | |
| ! | CAGTGCTCTGAACAAGCTCC+AGG | - | chr4.4:7912428-7912447 | MS.gene49717:intron | 55.0% |
| ! | CTGGAGCTTGTTCAGAGCAC+TGG | + | chr4.4:7912430-7912449 | None:intergenic | 55.0% |
| ! | TTCTAGTGGATCTGCCGCTG+TGG | - | chr4.4:7911174-7911193 | MS.gene49717:intron | 55.0% |
| CAGTGACAGCAGGAAGTCCC+AGG | + | chr4.4:7913936-7913955 | None:intergenic | 60.0% | |
| TGGATCTGCCGCTGTGGTGT+CGG | - | chr4.4:7911180-7911199 | MS.gene49717:intron | 60.0% | |
| !! | GCACTTGGTGTTGATGGGGG+AGG | - | chr4.4:7911220-7911239 | MS.gene49717:intron | 60.0% |
| CAACCCTGCCGACACCACAG+CGG | + | chr4.4:7911191-7911210 | None:intergenic | 65.0% | |
| GCAGGCATCCTCACAGAGCC+TGG | + | chr4.4:7911643-7911662 | None:intergenic | 65.0% | |
| !! | CTGCCGCTGTGGTGTCGGCA+GGG | - | chr4.4:7911185-7911204 | MS.gene49717:intron | 70.0% |
| !! | TCTGCCGCTGTGGTGTCGGC+AGG | - | chr4.4:7911184-7911203 | MS.gene49717:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 7908889 | 7914387 | 7908889 | ID=MS.gene49717 |
| chr4.4 | mRNA | 7908889 | 7914387 | 7908889 | ID=MS.gene49717.t1;Parent=MS.gene49717 |
| chr4.4 | exon | 7914288 | 7914387 | 7914288 | ID=MS.gene49717.t1.exon1;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7914288 | 7914387 | 7914288 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7913836 | 7913945 | 7913836 | ID=MS.gene49717.t1.exon2;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7913836 | 7913945 | 7913836 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7913572 | 7913632 | 7913572 | ID=MS.gene49717.t1.exon3;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7913572 | 7913632 | 7913572 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7913220 | 7913407 | 7913220 | ID=MS.gene49717.t1.exon4;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7913220 | 7913407 | 7913220 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7912862 | 7912991 | 7912862 | ID=MS.gene49717.t1.exon5;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7912862 | 7912991 | 7912862 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7912526 | 7912603 | 7912526 | ID=MS.gene49717.t1.exon6;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7912526 | 7912603 | 7912526 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7912277 | 7912424 | 7912277 | ID=MS.gene49717.t1.exon7;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7912277 | 7912424 | 7912277 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7912035 | 7912147 | 7912035 | ID=MS.gene49717.t1.exon8;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7912035 | 7912147 | 7912035 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7911557 | 7911632 | 7911557 | ID=MS.gene49717.t1.exon9;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7911557 | 7911632 | 7911557 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7911391 | 7911462 | 7911391 | ID=MS.gene49717.t1.exon10;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7911391 | 7911462 | 7911391 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7911253 | 7911304 | 7911253 | ID=MS.gene49717.t1.exon11;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7911253 | 7911304 | 7911253 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7911010 | 7911081 | 7911010 | ID=MS.gene49717.t1.exon12;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7911010 | 7911081 | 7911010 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7910809 | 7910889 | 7910809 | ID=MS.gene49717.t1.exon13;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7910809 | 7910889 | 7910809 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7910279 | 7910379 | 7910279 | ID=MS.gene49717.t1.exon14;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7910279 | 7910379 | 7910279 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7910100 | 7910192 | 7910100 | ID=MS.gene49717.t1.exon15;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7910100 | 7910192 | 7910100 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7909657 | 7909725 | 7909657 | ID=MS.gene49717.t1.exon16;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7909657 | 7909725 | 7909657 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7909499 | 7909563 | 7909499 | ID=MS.gene49717.t1.exon17;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7909499 | 7909563 | 7909499 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7909316 | 7909377 | 7909316 | ID=MS.gene49717.t1.exon18;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7909316 | 7909377 | 7909316 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7909126 | 7909221 | 7909126 | ID=MS.gene49717.t1.exon19;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7909126 | 7909221 | 7909126 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| chr4.4 | exon | 7908889 | 7908951 | 7908889 | ID=MS.gene49717.t1.exon20;Parent=MS.gene49717.t1 |
| chr4.4 | CDS | 7908889 | 7908951 | 7908889 | ID=cds.MS.gene49717.t1;Parent=MS.gene49717.t1 |
| Gene Sequence |
| Protein sequence |
