Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70600.t1 | XP_013461033.1 | 96.4 | 529 | 16 | 1 | 1 | 526 | 1 | 529 | 4.90E-228 | 800.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70600.t1 | Q9FJP6 | 52.7 | 556 | 230 | 9 | 1 | 525 | 1 | 554 | 2.7e-102 | 374.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70600.t1 | A0A072UZS8 | 96.4 | 529 | 16 | 1 | 1 | 526 | 1 | 529 | 3.5e-228 | 800.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene70600 | 0.844808 | 6.01E-59 | -1.69E-46 |
MS.gene04918 | MS.gene70600 | 0.804202 | 2.42E-49 | -1.69E-46 |
MS.gene04920 | MS.gene70600 | 0.802872 | 4.57E-49 | -1.69E-46 |
MS.gene049254 | MS.gene70600 | 0.827743 | 1.32E-54 | -1.69E-46 |
MS.gene049283 | MS.gene70600 | 0.837752 | 4.32E-57 | -1.69E-46 |
MS.gene049368 | MS.gene70600 | 0.854832 | 9.47E-62 | -1.69E-46 |
MS.gene049419 | MS.gene70600 | -0.804828 | 1.79E-49 | -1.69E-46 |
MS.gene049452 | MS.gene70600 | 0.806978 | 6.33E-50 | -1.69E-46 |
MS.gene049499 | MS.gene70600 | 0.82343 | 1.39E-53 | -1.69E-46 |
MS.gene049983 | MS.gene70600 | 0.880287 | 6.21E-70 | -1.69E-46 |
MS.gene050359 | MS.gene70600 | 0.802522 | 5.39E-49 | -1.69E-46 |
MS.gene050414 | MS.gene70600 | 0.831551 | 1.57E-55 | -1.69E-46 |
MS.gene050571 | MS.gene70600 | 0.812608 | 3.89E-51 | -1.69E-46 |
MS.gene050646 | MS.gene70600 | 0.84922 | 3.72E-60 | -1.69E-46 |
MS.gene050654 | MS.gene70600 | 0.853758 | 1.93E-61 | -1.69E-46 |
MS.gene050941 | MS.gene70600 | 0.824443 | 8.05E-54 | -1.69E-46 |
MS.gene051198 | MS.gene70600 | 0.802911 | 4.48E-49 | -1.69E-46 |
MS.gene051234 | MS.gene70600 | 0.823279 | 1.51E-53 | -1.69E-46 |
MS.gene051343 | MS.gene70600 | 0.802143 | 6.45E-49 | -1.69E-46 |
MS.gene051365 | MS.gene70600 | 0.804708 | 1.90E-49 | -1.69E-46 |
MS.gene051852 | MS.gene70600 | 0.821698 | 3.52E-53 | -1.69E-46 |
MS.gene051975 | MS.gene70600 | 0.807623 | 4.62E-50 | -1.69E-46 |
MS.gene052016 | MS.gene70600 | 0.818415 | 1.98E-52 | -1.69E-46 |
MS.gene052037 | MS.gene70600 | 0.804725 | 1.88E-49 | -1.69E-46 |
MS.gene052307 | MS.gene70600 | 0.845862 | 3.12E-59 | -1.69E-46 |
MS.gene052342 | MS.gene70600 | 0.808317 | 3.29E-50 | -1.69E-46 |
MS.gene052463 | MS.gene70600 | 0.871111 | 8.77E-67 | -1.69E-46 |
MS.gene052516 | MS.gene70600 | 0.825889 | 3.66E-54 | -1.69E-46 |
MS.gene052518 | MS.gene70600 | 0.801513 | 8.69E-49 | -1.69E-46 |
MS.gene052533 | MS.gene70600 | 0.835554 | 1.57E-56 | -1.69E-46 |
MS.gene052534 | MS.gene70600 | 0.811379 | 7.21E-51 | -1.69E-46 |
MS.gene052609 | MS.gene70600 | 0.804257 | 2.36E-49 | -1.69E-46 |
MS.gene052674 | MS.gene70600 | 0.807016 | 6.21E-50 | -1.69E-46 |
MS.gene052675 | MS.gene70600 | 0.801085 | 1.06E-48 | -1.69E-46 |
MS.gene052677 | MS.gene70600 | 0.800007 | 1.76E-48 | -1.69E-46 |
MS.gene052932 | MS.gene70600 | 0.831325 | 1.78E-55 | -1.69E-46 |
MS.gene053058 | MS.gene70600 | 0.806496 | 8.00E-50 | -1.69E-46 |
MS.gene053079 | MS.gene70600 | 0.821289 | 4.37E-53 | -1.69E-46 |
MS.gene053226 | MS.gene70600 | 0.80192 | 7.17E-49 | -1.69E-46 |
MS.gene053456 | MS.gene70600 | 0.831192 | 1.92E-55 | -1.69E-46 |
MS.gene054178 | MS.gene70600 | 0.800377 | 1.48E-48 | -1.69E-46 |
MS.gene05423 | MS.gene70600 | 0.802524 | 5.39E-49 | -1.69E-46 |
MS.gene054479 | MS.gene70600 | 0.834894 | 2.30E-56 | -1.69E-46 |
MS.gene05458 | MS.gene70600 | 0.83456 | 2.79E-56 | -1.69E-46 |
MS.gene054651 | MS.gene70600 | 0.815189 | 1.05E-51 | -1.69E-46 |
MS.gene054892 | MS.gene70600 | 0.82608 | 3.30E-54 | -1.69E-46 |
MS.gene054893 | MS.gene70600 | 0.824222 | 9.07E-54 | -1.69E-46 |
MS.gene05517 | MS.gene70600 | 0.801615 | 8.28E-49 | -1.69E-46 |
MS.gene055311 | MS.gene70600 | 0.806862 | 6.69E-50 | -1.69E-46 |
MS.gene055313 | MS.gene70600 | 0.817773 | 2.77E-52 | -1.69E-46 |
MS.gene055513 | MS.gene70600 | 0.866257 | 3.25E-65 | -1.69E-46 |
MS.gene05552 | MS.gene70600 | 0.807766 | 4.31E-50 | -1.69E-46 |
MS.gene055724 | MS.gene70600 | 0.80237 | 5.80E-49 | -1.69E-46 |
MS.gene055864 | MS.gene70600 | 0.814787 | 1.29E-51 | -1.69E-46 |
MS.gene056045 | MS.gene70600 | 0.837122 | 6.26E-57 | -1.69E-46 |
MS.gene056174 | MS.gene70600 | 0.802451 | 5.57E-49 | -1.69E-46 |
MS.gene056181 | MS.gene70600 | 0.808058 | 3.73E-50 | -1.69E-46 |
MS.gene056509 | MS.gene70600 | 0.820518 | 6.57E-53 | -1.69E-46 |
MS.gene056699 | MS.gene70600 | 0.850027 | 2.21E-60 | -1.69E-46 |
MS.gene056776 | MS.gene70600 | 0.815238 | 1.02E-51 | -1.69E-46 |
MS.gene056779 | MS.gene70600 | 0.813342 | 2.69E-51 | -1.69E-46 |
MS.gene056831 | MS.gene70600 | 0.815139 | 1.08E-51 | -1.69E-46 |
MS.gene05686 | MS.gene70600 | 0.831638 | 1.49E-55 | -1.69E-46 |
MS.gene056973 | MS.gene70600 | 0.804929 | 1.71E-49 | -1.69E-46 |
MS.gene057034 | MS.gene70600 | 0.85566 | 5.44E-62 | -1.69E-46 |
MS.gene057102 | MS.gene70600 | 0.847473 | 1.13E-59 | -1.69E-46 |
MS.gene057155 | MS.gene70600 | 0.820003 | 8.63E-53 | -1.69E-46 |
MS.gene057208 | MS.gene70600 | 0.823156 | 1.61E-53 | -1.69E-46 |
MS.gene057371 | MS.gene70600 | 0.801384 | 9.24E-49 | -1.69E-46 |
MS.gene058010 | MS.gene70600 | 0.803076 | 4.14E-49 | -1.69E-46 |
MS.gene058081 | MS.gene70600 | 0.801391 | 9.21E-49 | -1.69E-46 |
MS.gene058159 | MS.gene70600 | 0.810462 | 1.14E-50 | -1.69E-46 |
MS.gene058279 | MS.gene70600 | 0.814002 | 1.92E-51 | -1.69E-46 |
MS.gene058625 | MS.gene70600 | 0.803984 | 2.69E-49 | -1.69E-46 |
MS.gene058781 | MS.gene70600 | 0.810882 | 9.24E-51 | -1.69E-46 |
MS.gene058783 | MS.gene70600 | 0.808867 | 2.51E-50 | -1.69E-46 |
MS.gene059146 | MS.gene70600 | 0.812373 | 4.38E-51 | -1.69E-46 |
MS.gene059170 | MS.gene70600 | 0.827103 | 1.88E-54 | -1.69E-46 |
MS.gene059283 | MS.gene70600 | 0.811843 | 5.72E-51 | -1.69E-46 |
MS.gene05952 | MS.gene70600 | 0.820046 | 8.44E-53 | -1.69E-46 |
MS.gene05985 | MS.gene70600 | -0.811036 | 8.56E-51 | -1.69E-46 |
MS.gene059965 | MS.gene70600 | 0.854441 | 1.23E-61 | -1.69E-46 |
MS.gene060259 | MS.gene70600 | 0.832875 | 7.36E-56 | -1.69E-46 |
MS.gene060435 | MS.gene70600 | 0.821989 | 3.01E-53 | -1.69E-46 |
MS.gene060527 | MS.gene70600 | 0.807793 | 4.25E-50 | -1.69E-46 |
MS.gene06052 | MS.gene70600 | 0.818094 | 2.35E-52 | -1.69E-46 |
MS.gene060777 | MS.gene70600 | 0.810507 | 1.11E-50 | -1.69E-46 |
MS.gene060932 | MS.gene70600 | 0.876455 | 1.38E-68 | -1.69E-46 |
MS.gene060933 | MS.gene70600 | 0.822559 | 2.22E-53 | -1.69E-46 |
MS.gene060935 | MS.gene70600 | 0.847894 | 8.66E-60 | -1.69E-46 |
MS.gene060937 | MS.gene70600 | 0.853915 | 1.74E-61 | -1.69E-46 |
MS.gene061100 | MS.gene70600 | 0.831729 | 1.42E-55 | -1.69E-46 |
MS.gene061188 | MS.gene70600 | 0.809228 | 2.10E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70600.t1 | MTR_3g078340 | 96.408 | 529 | 16 | 1 | 1 | 526 | 1 | 529 | 0.0 | 1045 |
MS.gene70600.t1 | MTR_6g008170 | 51.120 | 491 | 212 | 8 | 6 | 479 | 30 | 509 | 6.51e-145 | 428 |
MS.gene70600.t1 | MTR_4g063800 | 35.179 | 307 | 182 | 6 | 181 | 482 | 332 | 626 | 3.95e-40 | 154 |
MS.gene70600.t1 | MTR_4g063800 | 23.747 | 379 | 248 | 9 | 25 | 384 | 256 | 612 | 4.70e-15 | 78.6 |
MS.gene70600.t1 | MTR_1g094215 | 36.972 | 284 | 173 | 3 | 209 | 490 | 163 | 442 | 2.54e-38 | 146 |
MS.gene70600.t1 | MTR_4g485520 | 32.491 | 277 | 182 | 2 | 209 | 483 | 206 | 479 | 5.27e-37 | 143 |
MS.gene70600.t1 | MTR_1g094215 | 36.972 | 284 | 173 | 3 | 209 | 490 | 346 | 625 | 6.52e-37 | 145 |
MS.gene70600.t1 | MTR_4g485520 | 32.491 | 277 | 182 | 2 | 209 | 483 | 374 | 647 | 3.65e-36 | 142 |
MS.gene70600.t1 | MTR_3g466220 | 31.579 | 285 | 191 | 2 | 210 | 493 | 534 | 815 | 1.47e-32 | 132 |
MS.gene70600.t1 | MTR_3g466220 | 34.884 | 86 | 56 | 0 | 7 | 92 | 195 | 280 | 4.15e-11 | 66.2 |
MS.gene70600.t1 | MTR_3g466220 | 31.579 | 285 | 191 | 2 | 210 | 493 | 555 | 836 | 1.84e-32 | 132 |
MS.gene70600.t1 | MTR_3g466220 | 34.884 | 86 | 56 | 0 | 7 | 92 | 216 | 301 | 4.20e-11 | 66.2 |
MS.gene70600.t1 | MTR_7g059405 | 29.412 | 272 | 189 | 1 | 209 | 480 | 362 | 630 | 1.92e-29 | 122 |
MS.gene70600.t1 | MTR_1g069845 | 31.387 | 274 | 184 | 2 | 211 | 483 | 326 | 596 | 3.52e-29 | 122 |
MS.gene70600.t1 | MTR_7g097020 | 30.108 | 279 | 191 | 2 | 211 | 488 | 485 | 760 | 4.45e-29 | 122 |
MS.gene70600.t1 | MTR_1g069845 | 31.387 | 274 | 184 | 2 | 211 | 483 | 443 | 713 | 7.59e-29 | 121 |
MS.gene70600.t1 | MTR_1g069845 | 31.387 | 274 | 184 | 2 | 211 | 483 | 447 | 717 | 7.86e-29 | 121 |
MS.gene70600.t1 | MTR_1g018180 | 28.727 | 275 | 191 | 2 | 211 | 483 | 64 | 335 | 2.57e-28 | 115 |
MS.gene70600.t1 | MTR_3g103050 | 26.523 | 279 | 196 | 3 | 211 | 483 | 54 | 329 | 1.39e-24 | 105 |
MS.gene70600.t1 | MTR_3g085610 | 25.352 | 497 | 311 | 15 | 24 | 506 | 280 | 730 | 1.52e-24 | 108 |
MS.gene70600.t1 | MTR_2g026130 | 32.472 | 271 | 178 | 2 | 215 | 483 | 182 | 449 | 5.34e-22 | 99.4 |
MS.gene70600.t1 | MTR_7g078330 | 30.034 | 293 | 182 | 8 | 203 | 483 | 360 | 641 | 1.48e-21 | 99.0 |
MS.gene70600.t1 | MTR_7g078330 | 25.263 | 380 | 221 | 8 | 25 | 395 | 275 | 600 | 1.03e-16 | 83.6 |
MS.gene70600.t1 | MTR_7g053260 | 28.470 | 281 | 190 | 6 | 210 | 483 | 174 | 450 | 1.68e-21 | 97.8 |
MS.gene70600.t1 | MTR_7g116600 | 30.317 | 221 | 150 | 3 | 264 | 482 | 232 | 450 | 4.21e-20 | 93.6 |
MS.gene70600.t1 | MTR_5g083030 | 27.698 | 278 | 191 | 6 | 209 | 479 | 406 | 680 | 2.43e-16 | 82.8 |
MS.gene70600.t1 | MTR_2g018010 | 29.762 | 252 | 168 | 6 | 230 | 475 | 418 | 666 | 2.16e-15 | 79.7 |
MS.gene70600.t1 | MTR_3g106140 | 26.948 | 308 | 206 | 6 | 193 | 483 | 89 | 394 | 3.98e-15 | 78.2 |
MS.gene70600.t1 | MTR_3g078160 | 28.139 | 231 | 156 | 6 | 265 | 487 | 433 | 661 | 5.79e-14 | 75.1 |
MS.gene70600.t1 | MTR_3g078160 | 28.139 | 231 | 156 | 6 | 265 | 487 | 433 | 661 | 5.93e-14 | 75.1 |
MS.gene70600.t1 | MTR_1g079450 | 29.730 | 222 | 146 | 5 | 267 | 482 | 219 | 436 | 1.33e-13 | 73.2 |
MS.gene70600.t1 | MTR_8g080280 | 26.619 | 278 | 184 | 7 | 216 | 483 | 442 | 709 | 3.83e-13 | 72.8 |
MS.gene70600.t1 | MTR_4g107010 | 25.347 | 288 | 195 | 8 | 215 | 487 | 386 | 668 | 1.43e-11 | 67.4 |
MS.gene70600.t1 | MTR_7g007780 | 30.573 | 157 | 106 | 1 | 250 | 403 | 601 | 757 | 7.52e-11 | 65.5 |
MS.gene70600.t1 | MTR_1g014420 | 25.641 | 273 | 190 | 5 | 222 | 483 | 143 | 413 | 9.25e-11 | 64.7 |
MS.gene70600.t1 | MTR_5g034440 | 25.439 | 228 | 163 | 4 | 265 | 485 | 440 | 667 | 9.58e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70600.t1 | AT5G65200 | 58.423 | 558 | 198 | 11 | 1 | 526 | 1 | 556 | 0.0 | 585 |
MS.gene70600.t1 | AT5G62560 | 49.556 | 563 | 243 | 9 | 1 | 526 | 1 | 559 | 1.47e-172 | 499 |
MS.gene70600.t1 | AT5G40140 | 50.746 | 536 | 234 | 11 | 5 | 526 | 31 | 550 | 9.28e-163 | 473 |
MS.gene70600.t1 | AT3G47820 | 50.187 | 536 | 217 | 11 | 1 | 508 | 1 | 514 | 2.78e-158 | 461 |
MS.gene70600.t1 | AT5G67340 | 27.143 | 490 | 313 | 8 | 25 | 493 | 241 | 707 | 1.99e-45 | 170 |
MS.gene70600.t1 | AT5G67340 | 27.143 | 490 | 313 | 8 | 25 | 493 | 241 | 707 | 1.99e-45 | 170 |
MS.gene70600.t1 | AT2G23140 | 34.286 | 280 | 180 | 2 | 211 | 489 | 357 | 633 | 1.97e-37 | 146 |
MS.gene70600.t1 | AT2G23140 | 34.286 | 280 | 180 | 2 | 211 | 489 | 357 | 633 | 1.97e-37 | 146 |
MS.gene70600.t1 | AT2G23140 | 34.286 | 280 | 180 | 2 | 211 | 489 | 546 | 822 | 9.24e-37 | 145 |
MS.gene70600.t1 | AT2G23140 | 34.286 | 280 | 180 | 2 | 211 | 489 | 546 | 822 | 9.24e-37 | 145 |
MS.gene70600.t1 | AT2G23140 | 34.286 | 280 | 180 | 2 | 211 | 489 | 549 | 825 | 1.00e-36 | 145 |
MS.gene70600.t1 | AT3G46510 | 29.808 | 312 | 208 | 3 | 182 | 491 | 334 | 636 | 2.55e-32 | 131 |
MS.gene70600.t1 | AT3G46510 | 23.958 | 384 | 261 | 9 | 16 | 384 | 246 | 613 | 6.74e-15 | 78.2 |
MS.gene70600.t1 | AT2G28830 | 32.867 | 286 | 179 | 5 | 209 | 487 | 286 | 565 | 1.36e-31 | 129 |
MS.gene70600.t1 | AT2G28830 | 25.823 | 395 | 261 | 10 | 8 | 384 | 166 | 546 | 2.33e-21 | 98.2 |
MS.gene70600.t1 | AT3G54850 | 34.066 | 273 | 175 | 2 | 210 | 480 | 349 | 618 | 1.31e-30 | 126 |
MS.gene70600.t1 | AT1G23030 | 30.325 | 277 | 187 | 2 | 210 | 483 | 335 | 608 | 8.03e-30 | 124 |
MS.gene70600.t1 | AT1G71020 | 32.734 | 278 | 180 | 3 | 210 | 483 | 197 | 471 | 1.58e-29 | 122 |
MS.gene70600.t1 | AT1G71020 | 32.734 | 278 | 180 | 3 | 210 | 483 | 345 | 619 | 4.38e-29 | 122 |
MS.gene70600.t1 | AT3G01400 | 27.881 | 269 | 189 | 2 | 217 | 483 | 74 | 339 | 1.14e-26 | 111 |
MS.gene70600.t1 | AT3G54790 | 29.474 | 285 | 196 | 3 | 211 | 493 | 441 | 722 | 1.29e-24 | 108 |
MS.gene70600.t1 | AT3G54790 | 29.474 | 285 | 196 | 3 | 211 | 493 | 477 | 758 | 1.33e-24 | 108 |
MS.gene70600.t1 | AT3G54790 | 29.474 | 285 | 196 | 3 | 211 | 493 | 477 | 758 | 1.33e-24 | 108 |
MS.gene70600.t1 | AT4G16490 | 32.601 | 273 | 177 | 4 | 215 | 483 | 192 | 461 | 8.63e-23 | 101 |
MS.gene70600.t1 | AT5G42340 | 29.603 | 277 | 190 | 2 | 206 | 480 | 379 | 652 | 3.74e-22 | 100 |
MS.gene70600.t1 | AT5G42340 | 37.805 | 82 | 48 | 1 | 25 | 103 | 291 | 372 | 7.38e-12 | 68.6 |
MS.gene70600.t1 | AT5G58680 | 27.778 | 270 | 189 | 3 | 217 | 483 | 72 | 338 | 8.25e-22 | 97.4 |
MS.gene70600.t1 | AT1G67530 | 23.171 | 492 | 317 | 12 | 24 | 497 | 272 | 720 | 3.04e-19 | 92.0 |
MS.gene70600.t1 | AT1G67530 | 23.171 | 492 | 317 | 12 | 24 | 497 | 272 | 720 | 3.04e-19 | 92.0 |
MS.gene70600.t1 | AT1G67530 | 23.171 | 492 | 317 | 12 | 24 | 497 | 272 | 720 | 3.04e-19 | 92.0 |
MS.gene70600.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
MS.gene70600.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
MS.gene70600.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
MS.gene70600.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
MS.gene70600.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
MS.gene70600.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
MS.gene70600.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
MS.gene70600.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
MS.gene70600.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 38 | 316 | 3.46e-18 | 86.3 |
MS.gene70600.t1 | AT3G07360 | 26.761 | 284 | 193 | 7 | 210 | 483 | 173 | 451 | 9.95e-18 | 86.3 |
MS.gene70600.t1 | AT4G31890 | 28.947 | 304 | 190 | 9 | 230 | 520 | 167 | 457 | 5.33e-17 | 84.3 |
MS.gene70600.t1 | AT4G31890 | 28.947 | 304 | 190 | 9 | 230 | 520 | 167 | 457 | 5.33e-17 | 84.3 |
MS.gene70600.t1 | AT4G31890 | 28.947 | 304 | 190 | 9 | 230 | 520 | 167 | 457 | 5.33e-17 | 84.3 |
MS.gene70600.t1 | AT1G60190 | 26.715 | 277 | 189 | 8 | 222 | 485 | 390 | 665 | 2.23e-13 | 73.2 |
MS.gene70600.t1 | AT2G25130 | 27.407 | 270 | 183 | 6 | 230 | 488 | 133 | 400 | 9.21e-13 | 70.9 |
MS.gene70600.t1 | AT1G29340 | 22.812 | 320 | 206 | 4 | 25 | 342 | 306 | 586 | 3.91e-12 | 69.3 |
MS.gene70600.t1 | AT5G18320 | 26.689 | 296 | 200 | 7 | 209 | 490 | 162 | 454 | 5.10e-12 | 68.6 |
MS.gene70600.t1 | AT2G44900 | 31.210 | 157 | 105 | 1 | 250 | 403 | 612 | 768 | 1.64e-11 | 67.8 |
MS.gene70600.t1 | AT2G44900 | 31.210 | 157 | 105 | 1 | 250 | 403 | 612 | 768 | 1.64e-11 | 67.8 |
Find 163 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGGGAGTTTGAGATTTAA+AGG | 0.191233 | 3.1:-64269047 | MS.gene70600:CDS |
TTGGAGAAGATGAGGGGTTT+TGG | 0.230463 | 3.1:-64268936 | MS.gene70600:CDS |
GGTTCCGACGTTGCTTTCTA+TGG | 0.286020 | 3.1:-64269255 | MS.gene70600:CDS |
TCAGAGTAATAGAGTTAAAA+TGG | 0.294116 | 3.1:-64269291 | MS.gene70600:CDS |
GGGCGAGGGAGAAGGCTAAA+AGG | 0.303243 | 3.1:-64268962 | MS.gene70600:CDS |
GGGAATGATTGTTGAGAAAT+CGG | 0.320952 | 3.1:+64270156 | None:intergenic |
TTCACGGTATGTTGTTGTTC+AGG | 0.327991 | 3.1:-64269597 | MS.gene70600:CDS |
GACATTAACGACCCGGTAAT+GGG | 0.329670 | 3.1:+64270280 | None:intergenic |
GAGTTTCTATGTCCCATTAC+CGG | 0.348979 | 3.1:-64270292 | MS.gene70600:CDS |
CGGAGAAAGAGGATCTGATT+AGG | 0.350035 | 3.1:-64270021 | MS.gene70600:CDS |
GCTTCTTCTTCTTCCGAAAC+AGG | 0.356143 | 3.1:+64269764 | None:intergenic |
AAACCCTAACGTTCCTGTTT+CGG | 0.359819 | 3.1:-64269777 | MS.gene70600:CDS |
TCACACGCCGTGACGGAGTT+AGG | 0.366039 | 3.1:-64269944 | MS.gene70600:CDS |
TTTGGATGATGATAATAAAA+TGG | 0.372139 | 3.1:-64269420 | MS.gene70600:CDS |
CGACCCGGTCGTAGTCTCTT+CGG | 0.377913 | 3.1:-64270257 | MS.gene70600:CDS |
TGCGTTGTTTAGTTTGGCTT+TGG | 0.379190 | 3.1:-64269438 | MS.gene70600:CDS |
GTGATAATCGCGGCGAGTCC+TGG | 0.383507 | 3.1:-64269875 | MS.gene70600:CDS |
TGCGGTTGGGTGTACGGTGC+GGG | 0.384867 | 3.1:+64270090 | None:intergenic |
GTGAAAGGTAAAGGCGTTCC+AGG | 0.396856 | 3.1:+64269857 | None:intergenic |
TGCGGGTGCGTTGTTTAGTT+TGG | 0.400711 | 3.1:-64269444 | MS.gene70600:CDS |
TCTTCCGAAACAGGAACGTT+AGG | 0.402333 | 3.1:+64269773 | None:intergenic |
GGTCAACGCTGTTGCTTCGC+TGG | 0.405129 | 3.1:-64269576 | MS.gene70600:CDS |
GGACATTAACGACCCGGTAA+TGG | 0.405561 | 3.1:+64270279 | None:intergenic |
AAAATGGCGATTGGTGTTCT+TGG | 0.408213 | 3.1:-64269404 | MS.gene70600:CDS |
CGAACGAGGTACCGGGTTGC+CGG | 0.409468 | 3.1:-64268852 | MS.gene70600:CDS |
ATGGGACATAGAAACTCTTT+AGG | 0.414926 | 3.1:+64270298 | None:intergenic |
TGCCAATGCGGTGGATTGTT+TGG | 0.416139 | 3.1:-64269147 | MS.gene70600:CDS |
TTGTTTGGTGAGTTTGTTGA+GGG | 0.422104 | 3.1:-64269132 | MS.gene70600:CDS |
TCAAAACAACCATCGTAAAC+TGG | 0.424319 | 3.1:-64270123 | MS.gene70600:CDS |
CGTTGTATGCTTTGAGTCAT+GGG | 0.424637 | 3.1:-64269064 | MS.gene70600:CDS |
TCTGATTAGGGTTTCTGAAA+AGG | 0.426736 | 3.1:-64270008 | MS.gene70600:CDS |
GACCCGGTCGTAGTCTCTTC+GGG | 0.428173 | 3.1:-64270256 | MS.gene70600:CDS |
GGAGAAAGAGGATCTGATTA+GGG | 0.428639 | 3.1:-64270020 | MS.gene70600:CDS |
GCGTTGTATGCTTTGAGTCA+TGG | 0.439647 | 3.1:-64269065 | MS.gene70600:CDS |
TTCGTTCGTTGATTGATTCA+CGG | 0.441082 | 3.1:-64269613 | MS.gene70600:CDS |
TTCTCCACGGTGGTGTAATC+CGG | 0.442445 | 3.1:+64270067 | None:intergenic |
GTGGTGTAATCCGGTGCGGT+TGG | 0.442844 | 3.1:+64270076 | None:intergenic |
ATGGGAGTTTGAGATTTAAA+GGG | 0.444229 | 3.1:-64269046 | MS.gene70600:CDS |
AGACGGGGACGGATAGGGCG+AGG | 0.446380 | 3.1:-64268977 | MS.gene70600:CDS |
AGAGTTAAAATGGTGAAACT+TGG | 0.451853 | 3.1:-64269281 | MS.gene70600:CDS |
GAAGAAGCTGAAGAGTAAAG+AGG | 0.455129 | 3.1:-64269735 | MS.gene70600:CDS |
CTCTTTAGGAGGTTGTTGCT+TGG | 0.456080 | 3.1:+64270312 | None:intergenic |
AGGAAGATCCCGAGTTGAAA+TGG | 0.456371 | 3.1:+64269909 | None:intergenic |
GATTGTTGAGAAATCGGGTT+GGG | 0.461298 | 3.1:+64270162 | None:intergenic |
TGGTGTAATCCGGTGCGGTT+GGG | 0.462579 | 3.1:+64270077 | None:intergenic |
ATCCGGTGCGGTTGGGTGTA+CGG | 0.463198 | 3.1:+64270084 | None:intergenic |
TTGCTTTCTATGGTGATGAC+GGG | 0.465507 | 3.1:-64269245 | MS.gene70600:CDS |
TTCTGATTGATGTGTTGAAA+GGG | 0.466378 | 3.1:-64269493 | MS.gene70600:CDS |
GAGTTAAAATGGTGAAACTT+GGG | 0.469133 | 3.1:-64269280 | MS.gene70600:CDS |
TGCGTTGTATCATTTAACTT+TGG | 0.471898 | 3.1:-64269315 | MS.gene70600:CDS |
CTTCCGAAACAGGAACGTTA+GGG | 0.472631 | 3.1:+64269774 | None:intergenic |
ACAATTCTCCCTTGTCGCCT+CGG | 0.472722 | 3.1:+64269094 | None:intergenic |
TTTCTGATTGATGTGTTGAA+AGG | 0.476777 | 3.1:-64269494 | MS.gene70600:CDS |
GACTGGAATGAAGCTTAAAT+CGG | 0.480179 | 3.1:+64270198 | None:intergenic |
TTCAACACATCAATCAGAAA+AGG | 0.484827 | 3.1:+64269497 | None:intergenic |
AAGGTTATTGTTCCTACCTC+CGG | 0.487841 | 3.1:+64268833 | None:intergenic |
CGAGGAACAGAGAAGAAGCT+AGG | 0.488822 | 3.1:-64269670 | MS.gene70600:CDS |
GACGGATAGGGCGAGGGAGA+AGG | 0.492270 | 3.1:-64268970 | MS.gene70600:CDS |
GGAGGGAAGGACTGCAATGC+TGG | 0.492464 | 3.1:-64269171 | MS.gene70600:CDS |
TTTGAGGGTGATTGAAGAGA+CGG | 0.493350 | 3.1:-64268994 | MS.gene70600:CDS |
AACAAGGTTTAGTTTCGCTT+AGG | 0.495114 | 3.1:-64269700 | MS.gene70600:CDS |
TGAAGAGACGGGGACGGATA+GGG | 0.498915 | 3.1:-64268982 | MS.gene70600:CDS |
GGAATGATTGTTGAGAAATC+GGG | 0.502632 | 3.1:+64270157 | None:intergenic |
TTGAAGAGACGGGGACGGAT+AGG | 0.503676 | 3.1:-64268983 | MS.gene70600:CDS |
TTGAGGGTGATTGAAGAGAC+GGG | 0.507056 | 3.1:-64268993 | MS.gene70600:CDS |
GGCGAGGGAGAAGGCTAAAA+GGG | 0.508160 | 3.1:-64268961 | MS.gene70600:CDS |
GACGGGGACAATGGCGAGTA+GGG | 0.508942 | 3.1:-64269228 | MS.gene70600:CDS |
GGATGACTCGAACGAGGTAC+CGG | 0.510341 | 3.1:-64268860 | MS.gene70600:CDS |
AAGGGTGTTGGAGAAGATGA+GGG | 0.514938 | 3.1:-64268943 | MS.gene70600:CDS |
GTTTGGTGAGTTTGTTGAGG+GGG | 0.518188 | 3.1:-64269130 | MS.gene70600:CDS |
AGTTTCTATGTCCCATTACC+GGG | 0.519361 | 3.1:-64270291 | MS.gene70600:CDS |
AAGACAGTTATGGGTGGCAA+TGG | 0.521822 | 3.1:-64270379 | None:intergenic |
TTCTTTAACAATATTCTCCA+CGG | 0.528327 | 3.1:+64270054 | None:intergenic |
TTCATTCCAGTCCTGCAAAA+CGG | 0.532095 | 3.1:-64270187 | MS.gene70600:CDS |
AAGATGAGAATTGTGCGGTC+AGG | 0.532876 | 3.1:-64269527 | MS.gene70600:CDS |
CACCGTACACCCAACCGCAC+CGG | 0.537054 | 3.1:-64270086 | MS.gene70600:CDS |
GGAGAAGGCTAAAAGGGTGT+TGG | 0.538380 | 3.1:-64268955 | MS.gene70600:CDS |
CGCGGTGGCGGAGAATCCTC+CGG | 0.539515 | 3.1:-64269975 | MS.gene70600:CDS |
CACGTTGGACGAAGAGTGAA+AGG | 0.540583 | 3.1:+64269842 | None:intergenic |
CTGATTGATGTGTTGAAAGG+GGG | 0.541695 | 3.1:-64269491 | MS.gene70600:CDS |
GACGGGGACGGATAGGGCGA+GGG | 0.543757 | 3.1:-64268976 | MS.gene70600:CDS |
AAAGGGTGTTGGAGAAGATG+AGG | 0.543783 | 3.1:-64268944 | MS.gene70600:CDS |
GTTGCTTTCTATGGTGATGA+CGG | 0.544048 | 3.1:-64269246 | MS.gene70600:CDS |
GGAACTGTTAAACGCGGTGG+CGG | 0.544513 | 3.1:-64269987 | MS.gene70600:CDS |
GACCTCAGCGCATGCATCAA+CGG | 0.547695 | 3.1:+64269371 | None:intergenic |
TGTTCGATTTCTCTAACGAA+AGG | 0.548324 | 3.1:+64269549 | None:intergenic |
ATTGTTTGGTGAGTTTGTTG+AGG | 0.549398 | 3.1:-64269133 | MS.gene70600:CDS |
AGCTGGACTCCGAGGCGACA+AGG | 0.549976 | 3.1:-64269103 | MS.gene70600:CDS |
GTGCGGTTGGGTGTACGGTG+CGG | 0.551703 | 3.1:+64270089 | None:intergenic |
GGACGAAGAGTGAAAGGTAA+AGG | 0.563032 | 3.1:+64269848 | None:intergenic |
GAATCGCAGGAACATGCTGC+GGG | 0.563961 | 3.1:-64269461 | MS.gene70600:CDS |
GAGGAACAGAGAAGAAGCTA+GGG | 0.566795 | 3.1:-64269669 | MS.gene70600:CDS |
CACCAAACAATCCACCGCAT+TGG | 0.566797 | 3.1:+64269145 | None:intergenic |
TTGAGAAGAAGAACGATGGA+AGG | 0.567515 | 3.1:+64270336 | None:intergenic |
GGAGATGGTGATGATGAAGA+TGG | 0.568899 | 3.1:-64268915 | MS.gene70600:CDS |
TGTTCCTACCTCCGGCAACC+CGG | 0.569545 | 3.1:+64268841 | None:intergenic |
GAGATTTAAAGGGTTGGCGA+AGG | 0.570009 | 3.1:-64269036 | MS.gene70600:CDS |
GATGATAATAAAATGGCGAT+TGG | 0.571044 | 3.1:-64269413 | MS.gene70600:CDS |
TGACGGGGACAATGGCGAGT+AGG | 0.584009 | 3.1:-64269229 | MS.gene70600:CDS |
TATGGTGATGACGGGGACAA+TGG | 0.584130 | 3.1:-64269237 | MS.gene70600:CDS |
GTGTAATCTGGCAATGTGTG+TGG | 0.584777 | 3.1:-64269192 | MS.gene70600:CDS |
GCTGGACTCCGAGGCGACAA+GGG | 0.586777 | 3.1:-64269102 | MS.gene70600:CDS |
TGACCCGAAGAGACTACGAC+CGG | 0.587227 | 3.1:+64270253 | None:intergenic |
CGTGGCAACCATTTCAACTC+GGG | 0.591248 | 3.1:-64269917 | MS.gene70600:CDS |
GTTGATGCATGCGCTGAGGT+CGG | 0.592183 | 3.1:-64269369 | MS.gene70600:CDS |
GGGGAATGAGCTGGACTCCG+AGG | 0.596170 | 3.1:-64269111 | MS.gene70600:CDS |
GGTGATTGAAGAGACGGGGA+CGG | 0.596797 | 3.1:-64268988 | MS.gene70600:CDS |
TCAAACGATGAAGATGAAGA+AGG | 0.597145 | 3.1:+64269812 | None:intergenic |
TGTTTGGTGAGTTTGTTGAG+GGG | 0.602374 | 3.1:-64269131 | MS.gene70600:CDS |
GGACATAGAAACTCTTTAGG+AGG | 0.604367 | 3.1:+64270301 | None:intergenic |
TGGCAATGTGTGTGGAGGGA+AGG | 0.608019 | 3.1:-64269184 | MS.gene70600:CDS |
TGAATCGCAGGAACATGCTG+CGG | 0.615669 | 3.1:-64269462 | MS.gene70600:CDS |
TTGAACGGAGAGACGTTCGA+AGG | 0.617323 | 3.1:+64270228 | None:intergenic |
GAGTTTGAGATTTAAAGGGT+TGG | 0.617611 | 3.1:-64269042 | MS.gene70600:CDS |
CGGGTCGTTAATGTCCGACC+CGG | 0.619576 | 3.1:-64270272 | MS.gene70600:CDS |
TGATTGTTGAGAAATCGGGT+TGG | 0.620301 | 3.1:+64270161 | None:intergenic |
ACGAGGTACCGGGTTGCCGG+AGG | 0.620764 | 3.1:-64268849 | MS.gene70600:CDS |
CGGGTCGGACATTAACGACC+CGG | 0.622801 | 3.1:+64270273 | None:intergenic |
AGGGTGTTGGAGAAGATGAG+GGG | 0.627637 | 3.1:-64268942 | MS.gene70600:CDS |
TGCAATGCTGGATGCCAATG+CGG | 0.628398 | 3.1:-64269159 | MS.gene70600:CDS |
GATGACTCGAACGAGGTACC+GGG | 0.628698 | 3.1:-64268859 | MS.gene70600:CDS |
ACGTGGCAACCATTTCAACT+CGG | 0.628980 | 3.1:-64269918 | MS.gene70600:CDS |
ACGGCGTGTGAGAATATCAC+CGG | 0.631743 | 3.1:+64269956 | None:intergenic |
TAAATCGGTGCAGACTTGAA+CGG | 0.632167 | 3.1:+64270213 | None:intergenic |
GAAGGAAGCGAAAGCTGTGG+AGG | 0.632563 | 3.1:-64269018 | MS.gene70600:CDS |
AGTTAAAATGGTGAAACTTG+GGG | 0.636139 | 3.1:-64269279 | MS.gene70600:CDS |
GATTATCACAGATTCTTCTG+AGG | 0.643262 | 3.1:+64269889 | None:intergenic |
AAAATGTAGTTGAGTTGACA+AGG | 0.644928 | 3.1:+64268814 | None:intergenic |
TGGATTGAGAAGAAGAACGA+TGG | 0.644935 | 3.1:+64270332 | None:intergenic |
TTTGTCGCACCAGTTTACGA+TGG | 0.646791 | 3.1:+64270114 | None:intergenic |
TCTGATTGATGTGTTGAAAG+GGG | 0.648345 | 3.1:-64269492 | MS.gene70600:CDS |
TGCTTTCTATGGTGATGACG+GGG | 0.650983 | 3.1:-64269244 | MS.gene70600:CDS |
GGTCGGAGTCTGAGCGAACG+AGG | 0.651403 | 3.1:-64269352 | MS.gene70600:CDS |
CGAAGAGACTACGACCGGGT+CGG | 0.655580 | 3.1:+64270258 | None:intergenic |
GGCGACAAGGGAGAATTGTG+TGG | 0.661007 | 3.1:-64269090 | MS.gene70600:CDS |
GGCGAAGGAAGCGAAAGCTG+TGG | 0.661522 | 3.1:-64269021 | MS.gene70600:CDS |
GATATTCTCACACGCCGTGA+CGG | 0.662372 | 3.1:-64269951 | MS.gene70600:CDS |
ACGTGTACCTAACTCCGTCA+CGG | 0.662780 | 3.1:+64269937 | None:intergenic |
CACGGTGGTGTAATCCGGTG+CGG | 0.665606 | 3.1:+64270072 | None:intergenic |
TAATCTGGCAATGTGTGTGG+AGG | 0.671131 | 3.1:-64269189 | MS.gene70600:CDS |
TGAGGGTGATTGAAGAGACG+GGG | 0.673338 | 3.1:-64268992 | MS.gene70600:CDS |
TAAAATGGTGAAACTTGGGG+TGG | 0.676446 | 3.1:-64269276 | MS.gene70600:CDS |
GACAAGGGAGAATTGTGTGG+CGG | 0.677958 | 3.1:-64269087 | MS.gene70600:CDS |
GGGTTTCGCTATGCTCGCCG+CGG | 0.683987 | 3.1:-64269649 | MS.gene70600:CDS |
GGTACCGGGTTGCCGGAGGT+AGG | 0.684000 | 3.1:-64268845 | MS.gene70600:CDS |
AAAGGAACTGTTAAACGCGG+TGG | 0.687435 | 3.1:-64269990 | MS.gene70600:CDS |
AGCCGTTGATGCATGCGCTG+AGG | 0.692858 | 3.1:-64269373 | MS.gene70600:CDS |
AATCTGGCAATGTGTGTGGA+GGG | 0.696481 | 3.1:-64269188 | MS.gene70600:CDS |
AGAAGAATCTGTGATAATCG+CGG | 0.698509 | 3.1:-64269885 | MS.gene70600:CDS |
TGAAAAGGAACTGTTAAACG+CGG | 0.699521 | 3.1:-64269993 | MS.gene70600:CDS |
GTGGCAATGGAAAACACAGG+TGG | 0.702456 | 3.1:-64270366 | MS.gene70600:CDS |
CGAACAAGATGAGAATTGTG+CGG | 0.709970 | 3.1:-64269532 | MS.gene70600:CDS |
CGAATCGCCGATAAAATCCG+CGG | 0.710104 | 3.1:+64269632 | None:intergenic |
GCGTGTGAGAATATCACCGG+AGG | 0.710272 | 3.1:+64269959 | None:intergenic |
GACCCGAAGAGACTACGACC+GGG | 0.714896 | 3.1:+64270254 | None:intergenic |
AATGCTGGATGCCAATGCGG+TGG | 0.718832 | 3.1:-64269156 | MS.gene70600:CDS |
TTTAACAATATTCTCCACGG+TGG | 0.720548 | 3.1:+64270057 | None:intergenic |
CGGGTGGGATGACTCGAACG+AGG | 0.722144 | 3.1:-64268866 | MS.gene70600:CDS |
ATCACCATAGAAAGCAACGT+CGG | 0.731770 | 3.1:+64269251 | None:intergenic |
GTGACGGAGTTAGGTACACG+TGG | 0.734676 | 3.1:-64269935 | MS.gene70600:CDS |
TGGGTGGCAATGGAAAACAC+AGG | 0.747948 | 3.1:-64270369 | MS.gene70600:CDS |
TTTCGCTTAGGAGTATCACG+AGG | 0.748715 | 3.1:-64269688 | MS.gene70600:CDS |
CGCACCGGATTACACCACCG+TGG | 0.793146 | 3.1:-64270071 | MS.gene70600:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTGTTAAAGAAAAAATGA+CGG | - | chr3.1:64269138-64269157 | MS.gene70600:CDS | 15.0% |
!! | TTTGGATGATGATAATAAAA+TGG | - | chr3.1:64269762-64269781 | MS.gene70600:CDS | 20.0% |
! | TCAGAGTAATAGAGTTAAAA+TGG | - | chr3.1:64269891-64269910 | MS.gene70600:CDS | 25.0% |
! | TTCAAAAAGACTATCAAACT+CGG | + | chr3.1:64270295-64270314 | None:intergenic | 25.0% |
! | TTCTTTAACAATATTCTCCA+CGG | + | chr3.1:64269131-64269150 | None:intergenic | 25.0% |
!!! | GTTTGATAGTCTTTTTGAAT+CGG | - | chr3.1:64270296-64270315 | MS.gene70600:CDS | 25.0% |
!!! | TTTGATAGTCTTTTTGAATC+GGG | - | chr3.1:64270297-64270316 | MS.gene70600:CDS | 25.0% |
AGAGTTAAAATGGTGAAACT+TGG | - | chr3.1:64269901-64269920 | MS.gene70600:CDS | 30.0% | |
AGTTAAAATGGTGAAACTTG+GGG | - | chr3.1:64269903-64269922 | MS.gene70600:CDS | 30.0% | |
GAGTTAAAATGGTGAAACTT+GGG | - | chr3.1:64269902-64269921 | MS.gene70600:CDS | 30.0% | |
GATGATAATAAAATGGCGAT+TGG | - | chr3.1:64269769-64269788 | MS.gene70600:CDS | 30.0% | |
TGTTAAAGAAAAAATGACGG+CGG | - | chr3.1:64269141-64269160 | MS.gene70600:CDS | 30.0% | |
TTCAACACATCAATCAGAAA+AGG | + | chr3.1:64269688-64269707 | None:intergenic | 30.0% | |
TTCTGATTGATGTGTTGAAA+GGG | - | chr3.1:64269689-64269708 | MS.gene70600:CDS | 30.0% | |
TTTCTGATTGATGTGTTGAA+AGG | - | chr3.1:64269688-64269707 | MS.gene70600:CDS | 30.0% | |
! | ATGGGAGTTTGAGATTTAAA+GGG | - | chr3.1:64270136-64270155 | MS.gene70600:CDS | 30.0% |
! | TGCGTTGTATCATTTAACTT+TGG | - | chr3.1:64269867-64269886 | MS.gene70600:CDS | 30.0% |
!! | AAAATGTAGTTGAGTTGACA+AGG | + | chr3.1:64270371-64270390 | None:intergenic | 30.0% |
!!! | GTTGTTGATTTTGTGTAATC+TGG | - | chr3.1:64269978-64269997 | MS.gene70600:CDS | 30.0% |
!!! | GTTGTTTTGATAGCTAAGTT+GGG | + | chr3.1:64269049-64269068 | None:intergenic | 30.0% |
AGAAGAATCTGTGATAATCG+CGG | - | chr3.1:64269297-64269316 | MS.gene70600:CDS | 35.0% | |
ATGGGACATAGAAACTCTTT+AGG | + | chr3.1:64268887-64268906 | None:intergenic | 35.0% | |
GACTGGAATGAAGCTTAAAT+CGG | + | chr3.1:64268987-64269006 | None:intergenic | 35.0% | |
GATTATCACAGATTCTTCTG+AGG | + | chr3.1:64269296-64269315 | None:intergenic | 35.0% | |
GGAATGATTGTTGAGAAATC+GGG | + | chr3.1:64269028-64269047 | None:intergenic | 35.0% | |
GGGAATGATTGTTGAGAAAT+CGG | + | chr3.1:64269029-64269048 | None:intergenic | 35.0% | |
TCAAAACAACCATCGTAAAC+TGG | - | chr3.1:64269059-64269078 | MS.gene70600:CDS | 35.0% | |
TCAAACGATGAAGATGAAGA+AGG | + | chr3.1:64269373-64269392 | None:intergenic | 35.0% | |
TCTGATTGATGTGTTGAAAG+GGG | - | chr3.1:64269690-64269709 | MS.gene70600:CDS | 35.0% | |
TGAAAAGGAACTGTTAAACG+CGG | - | chr3.1:64269189-64269208 | MS.gene70600:CDS | 35.0% | |
TGTTCGATTTCTCTAACGAA+AGG | + | chr3.1:64269636-64269655 | None:intergenic | 35.0% | |
TTTAACAATATTCTCCACGG+TGG | + | chr3.1:64269128-64269147 | None:intergenic | 35.0% | |
! | AACAAGGTTTAGTTTCGCTT+AGG | - | chr3.1:64269482-64269501 | MS.gene70600:CDS | 35.0% |
! | ATAGTCTTTTTGAATCGGGT+GGG | - | chr3.1:64270301-64270320 | MS.gene70600:CDS | 35.0% |
! | CATGGGAGTTTGAGATTTAA+AGG | - | chr3.1:64270135-64270154 | MS.gene70600:CDS | 35.0% |
! | GAGTTTGAGATTTAAAGGGT+TGG | - | chr3.1:64270140-64270159 | MS.gene70600:CDS | 35.0% |
! | TCTGATTAGGGTTTCTGAAA+AGG | - | chr3.1:64269174-64269193 | MS.gene70600:CDS | 35.0% |
! | TTCGTTCGTTGATTGATTCA+CGG | - | chr3.1:64269569-64269588 | MS.gene70600:CDS | 35.0% |
!! | ATTGTTTGGTGAGTTTGTTG+AGG | - | chr3.1:64270049-64270068 | MS.gene70600:CDS | 35.0% |
!! | TTGTTTGGTGAGTTTGTTGA+GGG | - | chr3.1:64270050-64270069 | MS.gene70600:CDS | 35.0% |
!!! | GGTTGTTTTGATAGCTAAGT+TGG | + | chr3.1:64269050-64269069 | None:intergenic | 35.0% |
AAACCCTAACGTTCCTGTTT+CGG | - | chr3.1:64269405-64269424 | MS.gene70600:CDS | 40.0% | |
AAGGTTATTGTTCCTACCTC+CGG | + | chr3.1:64270352-64270371 | None:intergenic | 40.0% | |
AGTTTCTATGTCCCATTACC+GGG | - | chr3.1:64268891-64268910 | MS.gene70600:CDS | 40.0% | |
ATCACCATAGAAAGCAACGT+CGG | + | chr3.1:64269934-64269953 | None:intergenic | 40.0% | |
CGAACAAGATGAGAATTGTG+CGG | - | chr3.1:64269650-64269669 | MS.gene70600:CDS | 40.0% | |
CTGATTGATGTGTTGAAAGG+GGG | - | chr3.1:64269691-64269710 | MS.gene70600:CDS | 40.0% | |
GAAGAAGCTGAAGAGTAAAG+AGG | - | chr3.1:64269447-64269466 | MS.gene70600:CDS | 40.0% | |
GAAGAAGGTGAAAAACACGT+TGG | + | chr3.1:64269358-64269377 | None:intergenic | 40.0% | |
GAGTTTCTATGTCCCATTAC+CGG | - | chr3.1:64268890-64268909 | MS.gene70600:CDS | 40.0% | |
GATTGTTGAGAAATCGGGTT+GGG | + | chr3.1:64269023-64269042 | None:intergenic | 40.0% | |
GGACATAGAAACTCTTTAGG+AGG | + | chr3.1:64268884-64268903 | None:intergenic | 40.0% | |
GGAGAAAGAGGATCTGATTA+GGG | - | chr3.1:64269162-64269181 | MS.gene70600:CDS | 40.0% | |
TAAAATGGTGAAACTTGGGG+TGG | - | chr3.1:64269906-64269925 | MS.gene70600:CDS | 40.0% | |
TAAATCGGTGCAGACTTGAA+CGG | + | chr3.1:64268972-64268991 | None:intergenic | 40.0% | |
TGATTGTTGAGAAATCGGGT+TGG | + | chr3.1:64269024-64269043 | None:intergenic | 40.0% | |
TGGATTGAGAAGAAGAACGA+TGG | + | chr3.1:64268853-64268872 | None:intergenic | 40.0% | |
TTCATTCCAGTCCTGCAAAA+CGG | - | chr3.1:64268995-64269014 | MS.gene70600:CDS | 40.0% | |
TTGAGAAGAAGAACGATGGA+AGG | + | chr3.1:64268849-64268868 | None:intergenic | 40.0% | |
TTTGAGGGTGATTGAAGAGA+CGG | - | chr3.1:64270188-64270207 | MS.gene70600:CDS | 40.0% | |
! | AAAATGGCGATTGGTGTTCT+TGG | - | chr3.1:64269778-64269797 | MS.gene70600:CDS | 40.0% |
! | CGTTGTATGCTTTGAGTCAT+GGG | - | chr3.1:64270118-64270137 | MS.gene70600:CDS | 40.0% |
! | GATAGTCTTTTTGAATCGGG+TGG | - | chr3.1:64270300-64270319 | MS.gene70600:CDS | 40.0% |
! | GTTGCTTTCTATGGTGATGA+CGG | - | chr3.1:64269936-64269955 | MS.gene70600:CDS | 40.0% |
! | TTCACGGTATGTTGTTGTTC+AGG | - | chr3.1:64269585-64269604 | MS.gene70600:CDS | 40.0% |
! | TTGCTTTCTATGGTGATGAC+GGG | - | chr3.1:64269937-64269956 | MS.gene70600:CDS | 40.0% |
!! | GAGGTTTTTGAGCAAGAACA+AGG | - | chr3.1:64269466-64269485 | MS.gene70600:CDS | 40.0% |
!! | TGCGTTGTTTAGTTTGGCTT+TGG | - | chr3.1:64269744-64269763 | MS.gene70600:CDS | 40.0% |
!! | TGTTTGGTGAGTTTGTTGAG+GGG | - | chr3.1:64270051-64270070 | MS.gene70600:CDS | 40.0% |
AAAAATGACGGCGGAGAAAG+AGG | - | chr3.1:64269150-64269169 | MS.gene70600:CDS | 45.0% | |
AAAGGAACTGTTAAACGCGG+TGG | - | chr3.1:64269192-64269211 | MS.gene70600:CDS | 45.0% | |
AAGATGAGAATTGTGCGGTC+AGG | - | chr3.1:64269655-64269674 | MS.gene70600:CDS | 45.0% | |
AATCTGGCAATGTGTGTGGA+GGG | - | chr3.1:64269994-64270013 | MS.gene70600:CDS | 45.0% | |
ACGTGGCAACCATTTCAACT+CGG | - | chr3.1:64269264-64269283 | MS.gene70600:CDS | 45.0% | |
CGGAGAAAGAGGATCTGATT+AGG | - | chr3.1:64269161-64269180 | MS.gene70600:CDS | 45.0% | |
CTTCCGAAACAGGAACGTTA+GGG | + | chr3.1:64269411-64269430 | None:intergenic | 45.0% | |
GACATTAACGACCCGGTAAT+GGG | + | chr3.1:64268905-64268924 | None:intergenic | 45.0% | |
GAGGAACAGAGAAGAAGCTA+GGG | - | chr3.1:64269513-64269532 | MS.gene70600:CDS | 45.0% | |
GCTTCTTCTTCTTCCGAAAC+AGG | + | chr3.1:64269421-64269440 | None:intergenic | 45.0% | |
GGACGAAGAGTGAAAGGTAA+AGG | + | chr3.1:64269337-64269356 | None:intergenic | 45.0% | |
GTGTAATCTGGCAATGTGTG+TGG | - | chr3.1:64269990-64270009 | MS.gene70600:CDS | 45.0% | |
TAATCTGGCAATGTGTGTGG+AGG | - | chr3.1:64269993-64270012 | MS.gene70600:CDS | 45.0% | |
TCTTCCGAAACAGGAACGTT+AGG | + | chr3.1:64269412-64269431 | None:intergenic | 45.0% | |
TTGAGGGTGATTGAAGAGAC+GGG | - | chr3.1:64270189-64270208 | MS.gene70600:CDS | 45.0% | |
TTTGTCGCACCAGTTTACGA+TGG | + | chr3.1:64269071-64269090 | None:intergenic | 45.0% | |
! | AGGAAGATCCCGAGTTGAAA+TGG | + | chr3.1:64269276-64269295 | None:intergenic | 45.0% |
! | CTCTTTAGGAGGTTGTTGCT+TGG | + | chr3.1:64268873-64268892 | None:intergenic | 45.0% |
! | GAGATTTAAAGGGTTGGCGA+AGG | - | chr3.1:64270146-64270165 | MS.gene70600:CDS | 45.0% |
! | GCGTTGTATGCTTTGAGTCA+TGG | - | chr3.1:64270117-64270136 | MS.gene70600:CDS | 45.0% |
! | GGAGATGGTGATGATGAAGA+TGG | - | chr3.1:64270267-64270286 | MS.gene70600:CDS | 45.0% |
! | TGCTTTCTATGGTGATGACG+GGG | - | chr3.1:64269938-64269957 | MS.gene70600:CDS | 45.0% |
! | TTGGAGAAGATGAGGGGTTT+TGG | - | chr3.1:64270246-64270265 | MS.gene70600:CDS | 45.0% |
!! | AAAGGGTGTTGGAGAAGATG+AGG | - | chr3.1:64270238-64270257 | MS.gene70600:CDS | 45.0% |
!! | AAGGGTGTTGGAGAAGATGA+GGG | - | chr3.1:64270239-64270258 | MS.gene70600:CDS | 45.0% |
!! | GAAAGCTGTGGAGGTTTTGA+GGG | - | chr3.1:64270173-64270192 | MS.gene70600:CDS | 45.0% |
!! | GTTTGGTGAGTTTGTTGAGG+GGG | - | chr3.1:64270052-64270071 | MS.gene70600:CDS | 45.0% |
!! | TTTCGCTTAGGAGTATCACG+AGG | - | chr3.1:64269494-64269513 | MS.gene70600:CDS | 45.0% |
!!! | AAGATGAGGGGTTTTGGAGA+TGG | - | chr3.1:64270252-64270271 | MS.gene70600:CDS | 45.0% |
ACAATTCTCCCTTGTCGCCT+CGG | + | chr3.1:64270091-64270110 | None:intergenic | 50.0% | |
ACGGCGTGTGAGAATATCAC+CGG | + | chr3.1:64269229-64269248 | None:intergenic | 50.0% | |
ACGTGTACCTAACTCCGTCA+CGG | + | chr3.1:64269248-64269267 | None:intergenic | 50.0% | |
CACCAAACAATCCACCGCAT+TGG | + | chr3.1:64270040-64270059 | None:intergenic | 50.0% | |
CACGTTGGACGAAGAGTGAA+AGG | + | chr3.1:64269343-64269362 | None:intergenic | 50.0% | |
CGAATCGCCGATAAAATCCG+CGG | + | chr3.1:64269553-64269572 | None:intergenic | 50.0% | |
CGAGGAACAGAGAAGAAGCT+AGG | - | chr3.1:64269512-64269531 | MS.gene70600:CDS | 50.0% | |
CGTGGCAACCATTTCAACTC+GGG | - | chr3.1:64269265-64269284 | MS.gene70600:CDS | 50.0% | |
GACAAGGGAGAATTGTGTGG+CGG | - | chr3.1:64270095-64270114 | MS.gene70600:CDS | 50.0% | |
GATATTCTCACACGCCGTGA+CGG | - | chr3.1:64269231-64269250 | MS.gene70600:CDS | 50.0% | |
GGACATTAACGACCCGGTAA+TGG | + | chr3.1:64268906-64268925 | None:intergenic | 50.0% | |
GTGGCAATGGAAAACACAGG+TGG | - | chr3.1:64268816-64268835 | MS.gene70600:CDS | 50.0% | |
TGAATCGCAGGAACATGCTG+CGG | - | chr3.1:64269720-64269739 | MS.gene70600:CDS | 50.0% | |
TGAGGGTGATTGAAGAGACG+GGG | - | chr3.1:64270190-64270209 | MS.gene70600:CDS | 50.0% | |
TGCAATGCTGGATGCCAATG+CGG | - | chr3.1:64270023-64270042 | MS.gene70600:CDS | 50.0% | |
TGCGGGTGCGTTGTTTAGTT+TGG | - | chr3.1:64269738-64269757 | MS.gene70600:CDS | 50.0% | |
TGGGTGGCAATGGAAAACAC+AGG | - | chr3.1:64268813-64268832 | MS.gene70600:CDS | 50.0% | |
TTCTCCACGGTGGTGTAATC+CGG | + | chr3.1:64269118-64269137 | None:intergenic | 50.0% | |
TTGAACGGAGAGACGTTCGA+AGG | + | chr3.1:64268957-64268976 | None:intergenic | 50.0% | |
TTTGTTGAGGGGGAATGAGC+TGG | - | chr3.1:64270062-64270081 | MS.gene70600:CDS | 50.0% | |
! | ATGCTCGCCGCGGATTTTAT+CGG | - | chr3.1:64269543-64269562 | MS.gene70600:CDS | 50.0% |
! | CGAAAGCTGTGGAGGTTTTG+AGG | - | chr3.1:64270172-64270191 | MS.gene70600:CDS | 50.0% |
! | GGAGAAGGCTAAAAGGGTGT+TGG | - | chr3.1:64270227-64270246 | MS.gene70600:CDS | 50.0% |
! | GGTTCCGACGTTGCTTTCTA+TGG | - | chr3.1:64269927-64269946 | MS.gene70600:CDS | 50.0% |
!! | AGGGTGTTGGAGAAGATGAG+GGG | - | chr3.1:64270240-64270259 | MS.gene70600:CDS | 50.0% |
!! | GTGAAAGGTAAAGGCGTTCC+AGG | + | chr3.1:64269328-64269347 | None:intergenic | 50.0% |
!! | TATGGTGATGACGGGGACAA+TGG | - | chr3.1:64269945-64269964 | MS.gene70600:CDS | 50.0% |
!! | TGCCAATGCGGTGGATTGTT+TGG | - | chr3.1:64270035-64270054 | MS.gene70600:CDS | 50.0% |
AATGCTGGATGCCAATGCGG+TGG | - | chr3.1:64270026-64270045 | MS.gene70600:CDS | 55.0% | |
AGGGGGATTCAGTGAATCGC+AGG | - | chr3.1:64269708-64269727 | MS.gene70600:CDS | 55.0% | |
GAAGGAAGCGAAAGCTGTGG+AGG | - | chr3.1:64270164-64270183 | MS.gene70600:CDS | 55.0% | |
GAATCGCAGGAACATGCTGC+GGG | - | chr3.1:64269721-64269740 | MS.gene70600:CDS | 55.0% | |
GACCTCAGCGCATGCATCAA+CGG | + | chr3.1:64269814-64269833 | None:intergenic | 55.0% | |
GCGTGTGAGAATATCACCGG+AGG | + | chr3.1:64269226-64269245 | None:intergenic | 55.0% | |
GGAACTGTTAAACGCGGTGG+CGG | - | chr3.1:64269195-64269214 | MS.gene70600:CDS | 55.0% | |
GGATGACTCGAACGAGGTAC+CGG | - | chr3.1:64270322-64270341 | MS.gene70600:CDS | 55.0% | |
GGCGACAAGGGAGAATTGTG+TGG | - | chr3.1:64270092-64270111 | MS.gene70600:CDS | 55.0% | |
GGCGAGGGAGAAGGCTAAAA+GGG | - | chr3.1:64270221-64270240 | MS.gene70600:CDS | 55.0% | |
GGTGATTGAAGAGACGGGGA+CGG | - | chr3.1:64270194-64270213 | MS.gene70600:CDS | 55.0% | |
GTTGATGCATGCGCTGAGGT+CGG | - | chr3.1:64269813-64269832 | MS.gene70600:CDS | 55.0% | |
TGAAGAGACGGGGACGGATA+GGG | - | chr3.1:64270200-64270219 | MS.gene70600:CDS | 55.0% | |
TGACCCGAAGAGACTACGAC+CGG | + | chr3.1:64268932-64268951 | None:intergenic | 55.0% | |
TGGCAATGTGTGTGGAGGGA+AGG | - | chr3.1:64269998-64270017 | MS.gene70600:CDS | 55.0% | |
TGGTGTAATCCGGTGCGGTT+GGG | + | chr3.1:64269108-64269127 | None:intergenic | 55.0% | |
TTGAAGAGACGGGGACGGAT+AGG | - | chr3.1:64270199-64270218 | MS.gene70600:CDS | 55.0% | |
! | GATGACTCGAACGAGGTACC+GGG | - | chr3.1:64270323-64270342 | MS.gene70600:CDS | 55.0% |
! | GTGACGGAGTTAGGTACACG+TGG | - | chr3.1:64269247-64269266 | MS.gene70600:CDS | 55.0% |
! | TGGGTTCCGTTTTGCAGGAC+TGG | + | chr3.1:64269004-64269023 | None:intergenic | 55.0% |
AGCCGTTGATGCATGCGCTG+AGG | - | chr3.1:64269809-64269828 | MS.gene70600:CDS | 60.0% | |
ATCCGGTGCGGTTGGGTGTA+CGG | + | chr3.1:64269101-64269120 | None:intergenic | 60.0% | |
CACGGTGGTGTAATCCGGTG+CGG | + | chr3.1:64269113-64269132 | None:intergenic | 60.0% | |
CGAAGAGACTACGACCGGGT+CGG | + | chr3.1:64268927-64268946 | None:intergenic | 60.0% | |
CGACCCGGTCGTAGTCTCTT+CGG | - | chr3.1:64268925-64268944 | MS.gene70600:CDS | 60.0% | |
CGGGTCGGACATTAACGACC+CGG | + | chr3.1:64268912-64268931 | None:intergenic | 60.0% | |
CGGGTCGTTAATGTCCGACC+CGG | - | chr3.1:64268910-64268929 | MS.gene70600:CDS | 60.0% | |
GACCCGAAGAGACTACGACC+GGG | + | chr3.1:64268931-64268950 | None:intergenic | 60.0% | |
GACCCGGTCGTAGTCTCTTC+GGG | - | chr3.1:64268926-64268945 | MS.gene70600:CDS | 60.0% | |
GACGGGGACAATGGCGAGTA+GGG | - | chr3.1:64269954-64269973 | MS.gene70600:CDS | 60.0% | |
GGAGGGAAGGACTGCAATGC+TGG | - | chr3.1:64270011-64270030 | MS.gene70600:CDS | 60.0% | |
GGCGAAGGAAGCGAAAGCTG+TGG | - | chr3.1:64270161-64270180 | MS.gene70600:CDS | 60.0% | |
GGGCGAGGGAGAAGGCTAAA+AGG | - | chr3.1:64270220-64270239 | MS.gene70600:CDS | 60.0% | |
GTGATAATCGCGGCGAGTCC+TGG | - | chr3.1:64269307-64269326 | MS.gene70600:CDS | 60.0% | |
GTGGTGTAATCCGGTGCGGT+TGG | + | chr3.1:64269109-64269128 | None:intergenic | 60.0% | |
TGACGGGGACAATGGCGAGT+AGG | - | chr3.1:64269953-64269972 | MS.gene70600:CDS | 60.0% | |
TGTTCCTACCTCCGGCAACC+CGG | + | chr3.1:64270344-64270363 | None:intergenic | 60.0% | |
! | GGTCAACGCTGTTGCTTCGC+TGG | - | chr3.1:64269606-64269625 | MS.gene70600:CDS | 60.0% |
! | TCACACGCCGTGACGGAGTT+AGG | - | chr3.1:64269238-64269257 | MS.gene70600:CDS | 60.0% |
!! | CGGGTTGGGTTCCGTTTTGC+AGG | + | chr3.1:64269009-64269028 | None:intergenic | 60.0% |
AGCTGGACTCCGAGGCGACA+AGG | - | chr3.1:64270079-64270098 | MS.gene70600:CDS | 65.0% | |
CACCGTACACCCAACCGCAC+CGG | - | chr3.1:64269096-64269115 | MS.gene70600:CDS | 65.0% | |
CGCACCGGATTACACCACCG+TGG | - | chr3.1:64269111-64269130 | MS.gene70600:CDS | 65.0% | |
CGGGTGGGATGACTCGAACG+AGG | - | chr3.1:64270316-64270335 | MS.gene70600:CDS | 65.0% | |
GACGGATAGGGCGAGGGAGA+AGG | - | chr3.1:64270212-64270231 | MS.gene70600:CDS | 65.0% | |
GCTGGACTCCGAGGCGACAA+GGG | - | chr3.1:64270080-64270099 | MS.gene70600:CDS | 65.0% | |
GGGGAATGAGCTGGACTCCG+AGG | - | chr3.1:64270071-64270090 | MS.gene70600:CDS | 65.0% | |
GGGTTTCGCTATGCTCGCCG+CGG | - | chr3.1:64269533-64269552 | MS.gene70600:CDS | 65.0% | |
GGTCGGAGTCTGAGCGAACG+AGG | - | chr3.1:64269830-64269849 | MS.gene70600:CDS | 65.0% | |
GTGCGGTTGGGTGTACGGTG+CGG | + | chr3.1:64269096-64269115 | None:intergenic | 65.0% | |
TGCGGTTGGGTGTACGGTGC+GGG | + | chr3.1:64269095-64269114 | None:intergenic | 65.0% | |
!! | CGAACGAGGTACCGGGTTGC+CGG | - | chr3.1:64270330-64270349 | MS.gene70600:CDS | 65.0% |
AGACGGGGACGGATAGGGCG+AGG | - | chr3.1:64270205-64270224 | MS.gene70600:CDS | 70.0% | |
GACGGGGACGGATAGGGCGA+GGG | - | chr3.1:64270206-64270225 | MS.gene70600:CDS | 70.0% | |
! | GGTACCGGGTTGCCGGAGGT+AGG | - | chr3.1:64270337-64270356 | MS.gene70600:CDS | 70.0% |
!! | ACGAGGTACCGGGTTGCCGG+AGG | - | chr3.1:64270333-64270352 | MS.gene70600:CDS | 70.0% |
!! | CGCGGTGGCGGAGAATCCTC+CGG | - | chr3.1:64269207-64269226 | MS.gene70600:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 64268812 | 64270392 | 64268812 | ID=MS.gene70600 |
chr3.1 | mRNA | 64268812 | 64270392 | 64268812 | ID=MS.gene70600.t1;Parent=MS.gene70600 |
chr3.1 | exon | 64268812 | 64270392 | 64268812 | ID=MS.gene70600.t1.exon1;Parent=MS.gene70600.t1 |
chr3.1 | CDS | 64268812 | 64270392 | 64268812 | ID=cds.MS.gene70600.t1;Parent=MS.gene70600.t1 |
Gene Sequence |
Protein sequence |