AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70600


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70600.t1 MTR_3g078340 96.408 529 16 1 1 526 1 529 0.0 1045
MS.gene70600.t1 MTR_6g008170 51.120 491 212 8 6 479 30 509 6.51e-145 428
MS.gene70600.t1 MTR_4g063800 35.179 307 182 6 181 482 332 626 3.95e-40 154
MS.gene70600.t1 MTR_4g063800 23.747 379 248 9 25 384 256 612 4.70e-15 78.6
MS.gene70600.t1 MTR_1g094215 36.972 284 173 3 209 490 163 442 2.54e-38 146
MS.gene70600.t1 MTR_4g485520 32.491 277 182 2 209 483 206 479 5.27e-37 143
MS.gene70600.t1 MTR_1g094215 36.972 284 173 3 209 490 346 625 6.52e-37 145
MS.gene70600.t1 MTR_4g485520 32.491 277 182 2 209 483 374 647 3.65e-36 142
MS.gene70600.t1 MTR_3g466220 31.579 285 191 2 210 493 534 815 1.47e-32 132
MS.gene70600.t1 MTR_3g466220 34.884 86 56 0 7 92 195 280 4.15e-11 66.2
MS.gene70600.t1 MTR_3g466220 31.579 285 191 2 210 493 555 836 1.84e-32 132
MS.gene70600.t1 MTR_3g466220 34.884 86 56 0 7 92 216 301 4.20e-11 66.2
MS.gene70600.t1 MTR_7g059405 29.412 272 189 1 209 480 362 630 1.92e-29 122
MS.gene70600.t1 MTR_1g069845 31.387 274 184 2 211 483 326 596 3.52e-29 122
MS.gene70600.t1 MTR_7g097020 30.108 279 191 2 211 488 485 760 4.45e-29 122
MS.gene70600.t1 MTR_1g069845 31.387 274 184 2 211 483 443 713 7.59e-29 121
MS.gene70600.t1 MTR_1g069845 31.387 274 184 2 211 483 447 717 7.86e-29 121
MS.gene70600.t1 MTR_1g018180 28.727 275 191 2 211 483 64 335 2.57e-28 115
MS.gene70600.t1 MTR_3g103050 26.523 279 196 3 211 483 54 329 1.39e-24 105
MS.gene70600.t1 MTR_3g085610 25.352 497 311 15 24 506 280 730 1.52e-24 108
MS.gene70600.t1 MTR_2g026130 32.472 271 178 2 215 483 182 449 5.34e-22 99.4
MS.gene70600.t1 MTR_7g078330 30.034 293 182 8 203 483 360 641 1.48e-21 99.0
MS.gene70600.t1 MTR_7g078330 25.263 380 221 8 25 395 275 600 1.03e-16 83.6
MS.gene70600.t1 MTR_7g053260 28.470 281 190 6 210 483 174 450 1.68e-21 97.8
MS.gene70600.t1 MTR_7g116600 30.317 221 150 3 264 482 232 450 4.21e-20 93.6
MS.gene70600.t1 MTR_5g083030 27.698 278 191 6 209 479 406 680 2.43e-16 82.8
MS.gene70600.t1 MTR_2g018010 29.762 252 168 6 230 475 418 666 2.16e-15 79.7
MS.gene70600.t1 MTR_3g106140 26.948 308 206 6 193 483 89 394 3.98e-15 78.2
MS.gene70600.t1 MTR_3g078160 28.139 231 156 6 265 487 433 661 5.79e-14 75.1
MS.gene70600.t1 MTR_3g078160 28.139 231 156 6 265 487 433 661 5.93e-14 75.1
MS.gene70600.t1 MTR_1g079450 29.730 222 146 5 267 482 219 436 1.33e-13 73.2
MS.gene70600.t1 MTR_8g080280 26.619 278 184 7 216 483 442 709 3.83e-13 72.8
MS.gene70600.t1 MTR_4g107010 25.347 288 195 8 215 487 386 668 1.43e-11 67.4
MS.gene70600.t1 MTR_7g007780 30.573 157 106 1 250 403 601 757 7.52e-11 65.5
MS.gene70600.t1 MTR_1g014420 25.641 273 190 5 222 483 143 413 9.25e-11 64.7
MS.gene70600.t1 MTR_5g034440 25.439 228 163 4 265 485 440 667 9.58e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70600.t1 AT5G65200 58.423 558 198 11 1 526 1 556 0.0 585
MS.gene70600.t1 AT5G62560 49.556 563 243 9 1 526 1 559 1.47e-172 499
MS.gene70600.t1 AT5G40140 50.746 536 234 11 5 526 31 550 9.28e-163 473
MS.gene70600.t1 AT3G47820 50.187 536 217 11 1 508 1 514 2.78e-158 461
MS.gene70600.t1 AT5G67340 27.143 490 313 8 25 493 241 707 1.99e-45 170
MS.gene70600.t1 AT5G67340 27.143 490 313 8 25 493 241 707 1.99e-45 170
MS.gene70600.t1 AT2G23140 34.286 280 180 2 211 489 357 633 1.97e-37 146
MS.gene70600.t1 AT2G23140 34.286 280 180 2 211 489 357 633 1.97e-37 146
MS.gene70600.t1 AT2G23140 34.286 280 180 2 211 489 546 822 9.24e-37 145
MS.gene70600.t1 AT2G23140 34.286 280 180 2 211 489 546 822 9.24e-37 145
MS.gene70600.t1 AT2G23140 34.286 280 180 2 211 489 549 825 1.00e-36 145
MS.gene70600.t1 AT3G46510 29.808 312 208 3 182 491 334 636 2.55e-32 131
MS.gene70600.t1 AT3G46510 23.958 384 261 9 16 384 246 613 6.74e-15 78.2
MS.gene70600.t1 AT2G28830 32.867 286 179 5 209 487 286 565 1.36e-31 129
MS.gene70600.t1 AT2G28830 25.823 395 261 10 8 384 166 546 2.33e-21 98.2
MS.gene70600.t1 AT3G54850 34.066 273 175 2 210 480 349 618 1.31e-30 126
MS.gene70600.t1 AT1G23030 30.325 277 187 2 210 483 335 608 8.03e-30 124
MS.gene70600.t1 AT1G71020 32.734 278 180 3 210 483 197 471 1.58e-29 122
MS.gene70600.t1 AT1G71020 32.734 278 180 3 210 483 345 619 4.38e-29 122
MS.gene70600.t1 AT3G01400 27.881 269 189 2 217 483 74 339 1.14e-26 111
MS.gene70600.t1 AT3G54790 29.474 285 196 3 211 493 441 722 1.29e-24 108
MS.gene70600.t1 AT3G54790 29.474 285 196 3 211 493 477 758 1.33e-24 108
MS.gene70600.t1 AT3G54790 29.474 285 196 3 211 493 477 758 1.33e-24 108
MS.gene70600.t1 AT4G16490 32.601 273 177 4 215 483 192 461 8.63e-23 101
MS.gene70600.t1 AT5G42340 29.603 277 190 2 206 480 379 652 3.74e-22 100
MS.gene70600.t1 AT5G42340 37.805 82 48 1 25 103 291 372 7.38e-12 68.6
MS.gene70600.t1 AT5G58680 27.778 270 189 3 217 483 72 338 8.25e-22 97.4
MS.gene70600.t1 AT1G67530 23.171 492 317 12 24 497 272 720 3.04e-19 92.0
MS.gene70600.t1 AT1G67530 23.171 492 317 12 24 497 272 720 3.04e-19 92.0
MS.gene70600.t1 AT1G67530 23.171 492 317 12 24 497 272 720 3.04e-19 92.0
MS.gene70600.t1 AT3G07360 26.761 284 193 7 210 483 38 316 3.46e-18 86.3
MS.gene70600.t1 AT3G07360 26.761 284 193 7 210 483 38 316 3.46e-18 86.3
MS.gene70600.t1 AT3G07360 26.761 284 193 7 210 483 38 316 3.46e-18 86.3
MS.gene70600.t1 AT3G07360 26.761 284 193 7 210 483 38 316 3.46e-18 86.3
MS.gene70600.t1 AT3G07360 26.761 284 193 7 210 483 38 316 3.46e-18 86.3
MS.gene70600.t1 AT3G07360 26.761 284 193 7 210 483 38 316 3.46e-18 86.3
MS.gene70600.t1 AT3G07360 26.761 284 193 7 210 483 38 316 3.46e-18 86.3
MS.gene70600.t1 AT3G07360 26.761 284 193 7 210 483 38 316 3.46e-18 86.3
MS.gene70600.t1 AT3G07360 26.761 284 193 7 210 483 38 316 3.46e-18 86.3
MS.gene70600.t1 AT3G07360 26.761 284 193 7 210 483 173 451 9.95e-18 86.3
MS.gene70600.t1 AT4G31890 28.947 304 190 9 230 520 167 457 5.33e-17 84.3
MS.gene70600.t1 AT4G31890 28.947 304 190 9 230 520 167 457 5.33e-17 84.3
MS.gene70600.t1 AT4G31890 28.947 304 190 9 230 520 167 457 5.33e-17 84.3
MS.gene70600.t1 AT1G60190 26.715 277 189 8 222 485 390 665 2.23e-13 73.2
MS.gene70600.t1 AT2G25130 27.407 270 183 6 230 488 133 400 9.21e-13 70.9
MS.gene70600.t1 AT1G29340 22.812 320 206 4 25 342 306 586 3.91e-12 69.3
MS.gene70600.t1 AT5G18320 26.689 296 200 7 209 490 162 454 5.10e-12 68.6
MS.gene70600.t1 AT2G44900 31.210 157 105 1 250 403 612 768 1.64e-11 67.8
MS.gene70600.t1 AT2G44900 31.210 157 105 1 250 403 612 768 1.64e-11 67.8

Find 163 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGGAGTTTGAGATTTAA+AGG 0.191233 3.1:-64269047 MS.gene70600:CDS
TTGGAGAAGATGAGGGGTTT+TGG 0.230463 3.1:-64268936 MS.gene70600:CDS
GGTTCCGACGTTGCTTTCTA+TGG 0.286020 3.1:-64269255 MS.gene70600:CDS
TCAGAGTAATAGAGTTAAAA+TGG 0.294116 3.1:-64269291 MS.gene70600:CDS
GGGCGAGGGAGAAGGCTAAA+AGG 0.303243 3.1:-64268962 MS.gene70600:CDS
GGGAATGATTGTTGAGAAAT+CGG 0.320952 3.1:+64270156 None:intergenic
TTCACGGTATGTTGTTGTTC+AGG 0.327991 3.1:-64269597 MS.gene70600:CDS
GACATTAACGACCCGGTAAT+GGG 0.329670 3.1:+64270280 None:intergenic
GAGTTTCTATGTCCCATTAC+CGG 0.348979 3.1:-64270292 MS.gene70600:CDS
CGGAGAAAGAGGATCTGATT+AGG 0.350035 3.1:-64270021 MS.gene70600:CDS
GCTTCTTCTTCTTCCGAAAC+AGG 0.356143 3.1:+64269764 None:intergenic
AAACCCTAACGTTCCTGTTT+CGG 0.359819 3.1:-64269777 MS.gene70600:CDS
TCACACGCCGTGACGGAGTT+AGG 0.366039 3.1:-64269944 MS.gene70600:CDS
TTTGGATGATGATAATAAAA+TGG 0.372139 3.1:-64269420 MS.gene70600:CDS
CGACCCGGTCGTAGTCTCTT+CGG 0.377913 3.1:-64270257 MS.gene70600:CDS
TGCGTTGTTTAGTTTGGCTT+TGG 0.379190 3.1:-64269438 MS.gene70600:CDS
GTGATAATCGCGGCGAGTCC+TGG 0.383507 3.1:-64269875 MS.gene70600:CDS
TGCGGTTGGGTGTACGGTGC+GGG 0.384867 3.1:+64270090 None:intergenic
GTGAAAGGTAAAGGCGTTCC+AGG 0.396856 3.1:+64269857 None:intergenic
TGCGGGTGCGTTGTTTAGTT+TGG 0.400711 3.1:-64269444 MS.gene70600:CDS
TCTTCCGAAACAGGAACGTT+AGG 0.402333 3.1:+64269773 None:intergenic
GGTCAACGCTGTTGCTTCGC+TGG 0.405129 3.1:-64269576 MS.gene70600:CDS
GGACATTAACGACCCGGTAA+TGG 0.405561 3.1:+64270279 None:intergenic
AAAATGGCGATTGGTGTTCT+TGG 0.408213 3.1:-64269404 MS.gene70600:CDS
CGAACGAGGTACCGGGTTGC+CGG 0.409468 3.1:-64268852 MS.gene70600:CDS
ATGGGACATAGAAACTCTTT+AGG 0.414926 3.1:+64270298 None:intergenic
TGCCAATGCGGTGGATTGTT+TGG 0.416139 3.1:-64269147 MS.gene70600:CDS
TTGTTTGGTGAGTTTGTTGA+GGG 0.422104 3.1:-64269132 MS.gene70600:CDS
TCAAAACAACCATCGTAAAC+TGG 0.424319 3.1:-64270123 MS.gene70600:CDS
CGTTGTATGCTTTGAGTCAT+GGG 0.424637 3.1:-64269064 MS.gene70600:CDS
TCTGATTAGGGTTTCTGAAA+AGG 0.426736 3.1:-64270008 MS.gene70600:CDS
GACCCGGTCGTAGTCTCTTC+GGG 0.428173 3.1:-64270256 MS.gene70600:CDS
GGAGAAAGAGGATCTGATTA+GGG 0.428639 3.1:-64270020 MS.gene70600:CDS
GCGTTGTATGCTTTGAGTCA+TGG 0.439647 3.1:-64269065 MS.gene70600:CDS
TTCGTTCGTTGATTGATTCA+CGG 0.441082 3.1:-64269613 MS.gene70600:CDS
TTCTCCACGGTGGTGTAATC+CGG 0.442445 3.1:+64270067 None:intergenic
GTGGTGTAATCCGGTGCGGT+TGG 0.442844 3.1:+64270076 None:intergenic
ATGGGAGTTTGAGATTTAAA+GGG 0.444229 3.1:-64269046 MS.gene70600:CDS
AGACGGGGACGGATAGGGCG+AGG 0.446380 3.1:-64268977 MS.gene70600:CDS
AGAGTTAAAATGGTGAAACT+TGG 0.451853 3.1:-64269281 MS.gene70600:CDS
GAAGAAGCTGAAGAGTAAAG+AGG 0.455129 3.1:-64269735 MS.gene70600:CDS
CTCTTTAGGAGGTTGTTGCT+TGG 0.456080 3.1:+64270312 None:intergenic
AGGAAGATCCCGAGTTGAAA+TGG 0.456371 3.1:+64269909 None:intergenic
GATTGTTGAGAAATCGGGTT+GGG 0.461298 3.1:+64270162 None:intergenic
TGGTGTAATCCGGTGCGGTT+GGG 0.462579 3.1:+64270077 None:intergenic
ATCCGGTGCGGTTGGGTGTA+CGG 0.463198 3.1:+64270084 None:intergenic
TTGCTTTCTATGGTGATGAC+GGG 0.465507 3.1:-64269245 MS.gene70600:CDS
TTCTGATTGATGTGTTGAAA+GGG 0.466378 3.1:-64269493 MS.gene70600:CDS
GAGTTAAAATGGTGAAACTT+GGG 0.469133 3.1:-64269280 MS.gene70600:CDS
TGCGTTGTATCATTTAACTT+TGG 0.471898 3.1:-64269315 MS.gene70600:CDS
CTTCCGAAACAGGAACGTTA+GGG 0.472631 3.1:+64269774 None:intergenic
ACAATTCTCCCTTGTCGCCT+CGG 0.472722 3.1:+64269094 None:intergenic
TTTCTGATTGATGTGTTGAA+AGG 0.476777 3.1:-64269494 MS.gene70600:CDS
GACTGGAATGAAGCTTAAAT+CGG 0.480179 3.1:+64270198 None:intergenic
TTCAACACATCAATCAGAAA+AGG 0.484827 3.1:+64269497 None:intergenic
AAGGTTATTGTTCCTACCTC+CGG 0.487841 3.1:+64268833 None:intergenic
CGAGGAACAGAGAAGAAGCT+AGG 0.488822 3.1:-64269670 MS.gene70600:CDS
GACGGATAGGGCGAGGGAGA+AGG 0.492270 3.1:-64268970 MS.gene70600:CDS
GGAGGGAAGGACTGCAATGC+TGG 0.492464 3.1:-64269171 MS.gene70600:CDS
TTTGAGGGTGATTGAAGAGA+CGG 0.493350 3.1:-64268994 MS.gene70600:CDS
AACAAGGTTTAGTTTCGCTT+AGG 0.495114 3.1:-64269700 MS.gene70600:CDS
TGAAGAGACGGGGACGGATA+GGG 0.498915 3.1:-64268982 MS.gene70600:CDS
GGAATGATTGTTGAGAAATC+GGG 0.502632 3.1:+64270157 None:intergenic
TTGAAGAGACGGGGACGGAT+AGG 0.503676 3.1:-64268983 MS.gene70600:CDS
TTGAGGGTGATTGAAGAGAC+GGG 0.507056 3.1:-64268993 MS.gene70600:CDS
GGCGAGGGAGAAGGCTAAAA+GGG 0.508160 3.1:-64268961 MS.gene70600:CDS
GACGGGGACAATGGCGAGTA+GGG 0.508942 3.1:-64269228 MS.gene70600:CDS
GGATGACTCGAACGAGGTAC+CGG 0.510341 3.1:-64268860 MS.gene70600:CDS
AAGGGTGTTGGAGAAGATGA+GGG 0.514938 3.1:-64268943 MS.gene70600:CDS
GTTTGGTGAGTTTGTTGAGG+GGG 0.518188 3.1:-64269130 MS.gene70600:CDS
AGTTTCTATGTCCCATTACC+GGG 0.519361 3.1:-64270291 MS.gene70600:CDS
AAGACAGTTATGGGTGGCAA+TGG 0.521822 3.1:-64270379 None:intergenic
TTCTTTAACAATATTCTCCA+CGG 0.528327 3.1:+64270054 None:intergenic
TTCATTCCAGTCCTGCAAAA+CGG 0.532095 3.1:-64270187 MS.gene70600:CDS
AAGATGAGAATTGTGCGGTC+AGG 0.532876 3.1:-64269527 MS.gene70600:CDS
CACCGTACACCCAACCGCAC+CGG 0.537054 3.1:-64270086 MS.gene70600:CDS
GGAGAAGGCTAAAAGGGTGT+TGG 0.538380 3.1:-64268955 MS.gene70600:CDS
CGCGGTGGCGGAGAATCCTC+CGG 0.539515 3.1:-64269975 MS.gene70600:CDS
CACGTTGGACGAAGAGTGAA+AGG 0.540583 3.1:+64269842 None:intergenic
CTGATTGATGTGTTGAAAGG+GGG 0.541695 3.1:-64269491 MS.gene70600:CDS
GACGGGGACGGATAGGGCGA+GGG 0.543757 3.1:-64268976 MS.gene70600:CDS
AAAGGGTGTTGGAGAAGATG+AGG 0.543783 3.1:-64268944 MS.gene70600:CDS
GTTGCTTTCTATGGTGATGA+CGG 0.544048 3.1:-64269246 MS.gene70600:CDS
GGAACTGTTAAACGCGGTGG+CGG 0.544513 3.1:-64269987 MS.gene70600:CDS
GACCTCAGCGCATGCATCAA+CGG 0.547695 3.1:+64269371 None:intergenic
TGTTCGATTTCTCTAACGAA+AGG 0.548324 3.1:+64269549 None:intergenic
ATTGTTTGGTGAGTTTGTTG+AGG 0.549398 3.1:-64269133 MS.gene70600:CDS
AGCTGGACTCCGAGGCGACA+AGG 0.549976 3.1:-64269103 MS.gene70600:CDS
GTGCGGTTGGGTGTACGGTG+CGG 0.551703 3.1:+64270089 None:intergenic
GGACGAAGAGTGAAAGGTAA+AGG 0.563032 3.1:+64269848 None:intergenic
GAATCGCAGGAACATGCTGC+GGG 0.563961 3.1:-64269461 MS.gene70600:CDS
GAGGAACAGAGAAGAAGCTA+GGG 0.566795 3.1:-64269669 MS.gene70600:CDS
CACCAAACAATCCACCGCAT+TGG 0.566797 3.1:+64269145 None:intergenic
TTGAGAAGAAGAACGATGGA+AGG 0.567515 3.1:+64270336 None:intergenic
GGAGATGGTGATGATGAAGA+TGG 0.568899 3.1:-64268915 MS.gene70600:CDS
TGTTCCTACCTCCGGCAACC+CGG 0.569545 3.1:+64268841 None:intergenic
GAGATTTAAAGGGTTGGCGA+AGG 0.570009 3.1:-64269036 MS.gene70600:CDS
GATGATAATAAAATGGCGAT+TGG 0.571044 3.1:-64269413 MS.gene70600:CDS
TGACGGGGACAATGGCGAGT+AGG 0.584009 3.1:-64269229 MS.gene70600:CDS
TATGGTGATGACGGGGACAA+TGG 0.584130 3.1:-64269237 MS.gene70600:CDS
GTGTAATCTGGCAATGTGTG+TGG 0.584777 3.1:-64269192 MS.gene70600:CDS
GCTGGACTCCGAGGCGACAA+GGG 0.586777 3.1:-64269102 MS.gene70600:CDS
TGACCCGAAGAGACTACGAC+CGG 0.587227 3.1:+64270253 None:intergenic
CGTGGCAACCATTTCAACTC+GGG 0.591248 3.1:-64269917 MS.gene70600:CDS
GTTGATGCATGCGCTGAGGT+CGG 0.592183 3.1:-64269369 MS.gene70600:CDS
GGGGAATGAGCTGGACTCCG+AGG 0.596170 3.1:-64269111 MS.gene70600:CDS
GGTGATTGAAGAGACGGGGA+CGG 0.596797 3.1:-64268988 MS.gene70600:CDS
TCAAACGATGAAGATGAAGA+AGG 0.597145 3.1:+64269812 None:intergenic
TGTTTGGTGAGTTTGTTGAG+GGG 0.602374 3.1:-64269131 MS.gene70600:CDS
GGACATAGAAACTCTTTAGG+AGG 0.604367 3.1:+64270301 None:intergenic
TGGCAATGTGTGTGGAGGGA+AGG 0.608019 3.1:-64269184 MS.gene70600:CDS
TGAATCGCAGGAACATGCTG+CGG 0.615669 3.1:-64269462 MS.gene70600:CDS
TTGAACGGAGAGACGTTCGA+AGG 0.617323 3.1:+64270228 None:intergenic
GAGTTTGAGATTTAAAGGGT+TGG 0.617611 3.1:-64269042 MS.gene70600:CDS
CGGGTCGTTAATGTCCGACC+CGG 0.619576 3.1:-64270272 MS.gene70600:CDS
TGATTGTTGAGAAATCGGGT+TGG 0.620301 3.1:+64270161 None:intergenic
ACGAGGTACCGGGTTGCCGG+AGG 0.620764 3.1:-64268849 MS.gene70600:CDS
CGGGTCGGACATTAACGACC+CGG 0.622801 3.1:+64270273 None:intergenic
AGGGTGTTGGAGAAGATGAG+GGG 0.627637 3.1:-64268942 MS.gene70600:CDS
TGCAATGCTGGATGCCAATG+CGG 0.628398 3.1:-64269159 MS.gene70600:CDS
GATGACTCGAACGAGGTACC+GGG 0.628698 3.1:-64268859 MS.gene70600:CDS
ACGTGGCAACCATTTCAACT+CGG 0.628980 3.1:-64269918 MS.gene70600:CDS
ACGGCGTGTGAGAATATCAC+CGG 0.631743 3.1:+64269956 None:intergenic
TAAATCGGTGCAGACTTGAA+CGG 0.632167 3.1:+64270213 None:intergenic
GAAGGAAGCGAAAGCTGTGG+AGG 0.632563 3.1:-64269018 MS.gene70600:CDS
AGTTAAAATGGTGAAACTTG+GGG 0.636139 3.1:-64269279 MS.gene70600:CDS
GATTATCACAGATTCTTCTG+AGG 0.643262 3.1:+64269889 None:intergenic
AAAATGTAGTTGAGTTGACA+AGG 0.644928 3.1:+64268814 None:intergenic
TGGATTGAGAAGAAGAACGA+TGG 0.644935 3.1:+64270332 None:intergenic
TTTGTCGCACCAGTTTACGA+TGG 0.646791 3.1:+64270114 None:intergenic
TCTGATTGATGTGTTGAAAG+GGG 0.648345 3.1:-64269492 MS.gene70600:CDS
TGCTTTCTATGGTGATGACG+GGG 0.650983 3.1:-64269244 MS.gene70600:CDS
GGTCGGAGTCTGAGCGAACG+AGG 0.651403 3.1:-64269352 MS.gene70600:CDS
CGAAGAGACTACGACCGGGT+CGG 0.655580 3.1:+64270258 None:intergenic
GGCGACAAGGGAGAATTGTG+TGG 0.661007 3.1:-64269090 MS.gene70600:CDS
GGCGAAGGAAGCGAAAGCTG+TGG 0.661522 3.1:-64269021 MS.gene70600:CDS
GATATTCTCACACGCCGTGA+CGG 0.662372 3.1:-64269951 MS.gene70600:CDS
ACGTGTACCTAACTCCGTCA+CGG 0.662780 3.1:+64269937 None:intergenic
CACGGTGGTGTAATCCGGTG+CGG 0.665606 3.1:+64270072 None:intergenic
TAATCTGGCAATGTGTGTGG+AGG 0.671131 3.1:-64269189 MS.gene70600:CDS
TGAGGGTGATTGAAGAGACG+GGG 0.673338 3.1:-64268992 MS.gene70600:CDS
TAAAATGGTGAAACTTGGGG+TGG 0.676446 3.1:-64269276 MS.gene70600:CDS
GACAAGGGAGAATTGTGTGG+CGG 0.677958 3.1:-64269087 MS.gene70600:CDS
GGGTTTCGCTATGCTCGCCG+CGG 0.683987 3.1:-64269649 MS.gene70600:CDS
GGTACCGGGTTGCCGGAGGT+AGG 0.684000 3.1:-64268845 MS.gene70600:CDS
AAAGGAACTGTTAAACGCGG+TGG 0.687435 3.1:-64269990 MS.gene70600:CDS
AGCCGTTGATGCATGCGCTG+AGG 0.692858 3.1:-64269373 MS.gene70600:CDS
AATCTGGCAATGTGTGTGGA+GGG 0.696481 3.1:-64269188 MS.gene70600:CDS
AGAAGAATCTGTGATAATCG+CGG 0.698509 3.1:-64269885 MS.gene70600:CDS
TGAAAAGGAACTGTTAAACG+CGG 0.699521 3.1:-64269993 MS.gene70600:CDS
GTGGCAATGGAAAACACAGG+TGG 0.702456 3.1:-64270366 MS.gene70600:CDS
CGAACAAGATGAGAATTGTG+CGG 0.709970 3.1:-64269532 MS.gene70600:CDS
CGAATCGCCGATAAAATCCG+CGG 0.710104 3.1:+64269632 None:intergenic
GCGTGTGAGAATATCACCGG+AGG 0.710272 3.1:+64269959 None:intergenic
GACCCGAAGAGACTACGACC+GGG 0.714896 3.1:+64270254 None:intergenic
AATGCTGGATGCCAATGCGG+TGG 0.718832 3.1:-64269156 MS.gene70600:CDS
TTTAACAATATTCTCCACGG+TGG 0.720548 3.1:+64270057 None:intergenic
CGGGTGGGATGACTCGAACG+AGG 0.722144 3.1:-64268866 MS.gene70600:CDS
ATCACCATAGAAAGCAACGT+CGG 0.731770 3.1:+64269251 None:intergenic
GTGACGGAGTTAGGTACACG+TGG 0.734676 3.1:-64269935 MS.gene70600:CDS
TGGGTGGCAATGGAAAACAC+AGG 0.747948 3.1:-64270369 MS.gene70600:CDS
TTTCGCTTAGGAGTATCACG+AGG 0.748715 3.1:-64269688 MS.gene70600:CDS
CGCACCGGATTACACCACCG+TGG 0.793146 3.1:-64270071 MS.gene70600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTGTTAAAGAAAAAATGA+CGG - chr3.1:64269138-64269157 MS.gene70600:CDS 15.0%
!! TTTGGATGATGATAATAAAA+TGG - chr3.1:64269762-64269781 MS.gene70600:CDS 20.0%
! TCAGAGTAATAGAGTTAAAA+TGG - chr3.1:64269891-64269910 MS.gene70600:CDS 25.0%
! TTCAAAAAGACTATCAAACT+CGG + chr3.1:64270295-64270314 None:intergenic 25.0%
! TTCTTTAACAATATTCTCCA+CGG + chr3.1:64269131-64269150 None:intergenic 25.0%
!!! GTTTGATAGTCTTTTTGAAT+CGG - chr3.1:64270296-64270315 MS.gene70600:CDS 25.0%
!!! TTTGATAGTCTTTTTGAATC+GGG - chr3.1:64270297-64270316 MS.gene70600:CDS 25.0%
AGAGTTAAAATGGTGAAACT+TGG - chr3.1:64269901-64269920 MS.gene70600:CDS 30.0%
AGTTAAAATGGTGAAACTTG+GGG - chr3.1:64269903-64269922 MS.gene70600:CDS 30.0%
GAGTTAAAATGGTGAAACTT+GGG - chr3.1:64269902-64269921 MS.gene70600:CDS 30.0%
GATGATAATAAAATGGCGAT+TGG - chr3.1:64269769-64269788 MS.gene70600:CDS 30.0%
TGTTAAAGAAAAAATGACGG+CGG - chr3.1:64269141-64269160 MS.gene70600:CDS 30.0%
TTCAACACATCAATCAGAAA+AGG + chr3.1:64269688-64269707 None:intergenic 30.0%
TTCTGATTGATGTGTTGAAA+GGG - chr3.1:64269689-64269708 MS.gene70600:CDS 30.0%
TTTCTGATTGATGTGTTGAA+AGG - chr3.1:64269688-64269707 MS.gene70600:CDS 30.0%
! ATGGGAGTTTGAGATTTAAA+GGG - chr3.1:64270136-64270155 MS.gene70600:CDS 30.0%
! TGCGTTGTATCATTTAACTT+TGG - chr3.1:64269867-64269886 MS.gene70600:CDS 30.0%
!! AAAATGTAGTTGAGTTGACA+AGG + chr3.1:64270371-64270390 None:intergenic 30.0%
!!! GTTGTTGATTTTGTGTAATC+TGG - chr3.1:64269978-64269997 MS.gene70600:CDS 30.0%
!!! GTTGTTTTGATAGCTAAGTT+GGG + chr3.1:64269049-64269068 None:intergenic 30.0%
AGAAGAATCTGTGATAATCG+CGG - chr3.1:64269297-64269316 MS.gene70600:CDS 35.0%
ATGGGACATAGAAACTCTTT+AGG + chr3.1:64268887-64268906 None:intergenic 35.0%
GACTGGAATGAAGCTTAAAT+CGG + chr3.1:64268987-64269006 None:intergenic 35.0%
GATTATCACAGATTCTTCTG+AGG + chr3.1:64269296-64269315 None:intergenic 35.0%
GGAATGATTGTTGAGAAATC+GGG + chr3.1:64269028-64269047 None:intergenic 35.0%
GGGAATGATTGTTGAGAAAT+CGG + chr3.1:64269029-64269048 None:intergenic 35.0%
TCAAAACAACCATCGTAAAC+TGG - chr3.1:64269059-64269078 MS.gene70600:CDS 35.0%
TCAAACGATGAAGATGAAGA+AGG + chr3.1:64269373-64269392 None:intergenic 35.0%
TCTGATTGATGTGTTGAAAG+GGG - chr3.1:64269690-64269709 MS.gene70600:CDS 35.0%
TGAAAAGGAACTGTTAAACG+CGG - chr3.1:64269189-64269208 MS.gene70600:CDS 35.0%
TGTTCGATTTCTCTAACGAA+AGG + chr3.1:64269636-64269655 None:intergenic 35.0%
TTTAACAATATTCTCCACGG+TGG + chr3.1:64269128-64269147 None:intergenic 35.0%
! AACAAGGTTTAGTTTCGCTT+AGG - chr3.1:64269482-64269501 MS.gene70600:CDS 35.0%
! ATAGTCTTTTTGAATCGGGT+GGG - chr3.1:64270301-64270320 MS.gene70600:CDS 35.0%
! CATGGGAGTTTGAGATTTAA+AGG - chr3.1:64270135-64270154 MS.gene70600:CDS 35.0%
! GAGTTTGAGATTTAAAGGGT+TGG - chr3.1:64270140-64270159 MS.gene70600:CDS 35.0%
! TCTGATTAGGGTTTCTGAAA+AGG - chr3.1:64269174-64269193 MS.gene70600:CDS 35.0%
! TTCGTTCGTTGATTGATTCA+CGG - chr3.1:64269569-64269588 MS.gene70600:CDS 35.0%
!! ATTGTTTGGTGAGTTTGTTG+AGG - chr3.1:64270049-64270068 MS.gene70600:CDS 35.0%
!! TTGTTTGGTGAGTTTGTTGA+GGG - chr3.1:64270050-64270069 MS.gene70600:CDS 35.0%
!!! GGTTGTTTTGATAGCTAAGT+TGG + chr3.1:64269050-64269069 None:intergenic 35.0%
AAACCCTAACGTTCCTGTTT+CGG - chr3.1:64269405-64269424 MS.gene70600:CDS 40.0%
AAGGTTATTGTTCCTACCTC+CGG + chr3.1:64270352-64270371 None:intergenic 40.0%
AGTTTCTATGTCCCATTACC+GGG - chr3.1:64268891-64268910 MS.gene70600:CDS 40.0%
ATCACCATAGAAAGCAACGT+CGG + chr3.1:64269934-64269953 None:intergenic 40.0%
CGAACAAGATGAGAATTGTG+CGG - chr3.1:64269650-64269669 MS.gene70600:CDS 40.0%
CTGATTGATGTGTTGAAAGG+GGG - chr3.1:64269691-64269710 MS.gene70600:CDS 40.0%
GAAGAAGCTGAAGAGTAAAG+AGG - chr3.1:64269447-64269466 MS.gene70600:CDS 40.0%
GAAGAAGGTGAAAAACACGT+TGG + chr3.1:64269358-64269377 None:intergenic 40.0%
GAGTTTCTATGTCCCATTAC+CGG - chr3.1:64268890-64268909 MS.gene70600:CDS 40.0%
GATTGTTGAGAAATCGGGTT+GGG + chr3.1:64269023-64269042 None:intergenic 40.0%
GGACATAGAAACTCTTTAGG+AGG + chr3.1:64268884-64268903 None:intergenic 40.0%
GGAGAAAGAGGATCTGATTA+GGG - chr3.1:64269162-64269181 MS.gene70600:CDS 40.0%
TAAAATGGTGAAACTTGGGG+TGG - chr3.1:64269906-64269925 MS.gene70600:CDS 40.0%
TAAATCGGTGCAGACTTGAA+CGG + chr3.1:64268972-64268991 None:intergenic 40.0%
TGATTGTTGAGAAATCGGGT+TGG + chr3.1:64269024-64269043 None:intergenic 40.0%
TGGATTGAGAAGAAGAACGA+TGG + chr3.1:64268853-64268872 None:intergenic 40.0%
TTCATTCCAGTCCTGCAAAA+CGG - chr3.1:64268995-64269014 MS.gene70600:CDS 40.0%
TTGAGAAGAAGAACGATGGA+AGG + chr3.1:64268849-64268868 None:intergenic 40.0%
TTTGAGGGTGATTGAAGAGA+CGG - chr3.1:64270188-64270207 MS.gene70600:CDS 40.0%
! AAAATGGCGATTGGTGTTCT+TGG - chr3.1:64269778-64269797 MS.gene70600:CDS 40.0%
! CGTTGTATGCTTTGAGTCAT+GGG - chr3.1:64270118-64270137 MS.gene70600:CDS 40.0%
! GATAGTCTTTTTGAATCGGG+TGG - chr3.1:64270300-64270319 MS.gene70600:CDS 40.0%
! GTTGCTTTCTATGGTGATGA+CGG - chr3.1:64269936-64269955 MS.gene70600:CDS 40.0%
! TTCACGGTATGTTGTTGTTC+AGG - chr3.1:64269585-64269604 MS.gene70600:CDS 40.0%
! TTGCTTTCTATGGTGATGAC+GGG - chr3.1:64269937-64269956 MS.gene70600:CDS 40.0%
!! GAGGTTTTTGAGCAAGAACA+AGG - chr3.1:64269466-64269485 MS.gene70600:CDS 40.0%
!! TGCGTTGTTTAGTTTGGCTT+TGG - chr3.1:64269744-64269763 MS.gene70600:CDS 40.0%
!! TGTTTGGTGAGTTTGTTGAG+GGG - chr3.1:64270051-64270070 MS.gene70600:CDS 40.0%
AAAAATGACGGCGGAGAAAG+AGG - chr3.1:64269150-64269169 MS.gene70600:CDS 45.0%
AAAGGAACTGTTAAACGCGG+TGG - chr3.1:64269192-64269211 MS.gene70600:CDS 45.0%
AAGATGAGAATTGTGCGGTC+AGG - chr3.1:64269655-64269674 MS.gene70600:CDS 45.0%
AATCTGGCAATGTGTGTGGA+GGG - chr3.1:64269994-64270013 MS.gene70600:CDS 45.0%
ACGTGGCAACCATTTCAACT+CGG - chr3.1:64269264-64269283 MS.gene70600:CDS 45.0%
CGGAGAAAGAGGATCTGATT+AGG - chr3.1:64269161-64269180 MS.gene70600:CDS 45.0%
CTTCCGAAACAGGAACGTTA+GGG + chr3.1:64269411-64269430 None:intergenic 45.0%
GACATTAACGACCCGGTAAT+GGG + chr3.1:64268905-64268924 None:intergenic 45.0%
GAGGAACAGAGAAGAAGCTA+GGG - chr3.1:64269513-64269532 MS.gene70600:CDS 45.0%
GCTTCTTCTTCTTCCGAAAC+AGG + chr3.1:64269421-64269440 None:intergenic 45.0%
GGACGAAGAGTGAAAGGTAA+AGG + chr3.1:64269337-64269356 None:intergenic 45.0%
GTGTAATCTGGCAATGTGTG+TGG - chr3.1:64269990-64270009 MS.gene70600:CDS 45.0%
TAATCTGGCAATGTGTGTGG+AGG - chr3.1:64269993-64270012 MS.gene70600:CDS 45.0%
TCTTCCGAAACAGGAACGTT+AGG + chr3.1:64269412-64269431 None:intergenic 45.0%
TTGAGGGTGATTGAAGAGAC+GGG - chr3.1:64270189-64270208 MS.gene70600:CDS 45.0%
TTTGTCGCACCAGTTTACGA+TGG + chr3.1:64269071-64269090 None:intergenic 45.0%
! AGGAAGATCCCGAGTTGAAA+TGG + chr3.1:64269276-64269295 None:intergenic 45.0%
! CTCTTTAGGAGGTTGTTGCT+TGG + chr3.1:64268873-64268892 None:intergenic 45.0%
! GAGATTTAAAGGGTTGGCGA+AGG - chr3.1:64270146-64270165 MS.gene70600:CDS 45.0%
! GCGTTGTATGCTTTGAGTCA+TGG - chr3.1:64270117-64270136 MS.gene70600:CDS 45.0%
! GGAGATGGTGATGATGAAGA+TGG - chr3.1:64270267-64270286 MS.gene70600:CDS 45.0%
! TGCTTTCTATGGTGATGACG+GGG - chr3.1:64269938-64269957 MS.gene70600:CDS 45.0%
! TTGGAGAAGATGAGGGGTTT+TGG - chr3.1:64270246-64270265 MS.gene70600:CDS 45.0%
!! AAAGGGTGTTGGAGAAGATG+AGG - chr3.1:64270238-64270257 MS.gene70600:CDS 45.0%
!! AAGGGTGTTGGAGAAGATGA+GGG - chr3.1:64270239-64270258 MS.gene70600:CDS 45.0%
!! GAAAGCTGTGGAGGTTTTGA+GGG - chr3.1:64270173-64270192 MS.gene70600:CDS 45.0%
!! GTTTGGTGAGTTTGTTGAGG+GGG - chr3.1:64270052-64270071 MS.gene70600:CDS 45.0%
!! TTTCGCTTAGGAGTATCACG+AGG - chr3.1:64269494-64269513 MS.gene70600:CDS 45.0%
!!! AAGATGAGGGGTTTTGGAGA+TGG - chr3.1:64270252-64270271 MS.gene70600:CDS 45.0%
ACAATTCTCCCTTGTCGCCT+CGG + chr3.1:64270091-64270110 None:intergenic 50.0%
ACGGCGTGTGAGAATATCAC+CGG + chr3.1:64269229-64269248 None:intergenic 50.0%
ACGTGTACCTAACTCCGTCA+CGG + chr3.1:64269248-64269267 None:intergenic 50.0%
CACCAAACAATCCACCGCAT+TGG + chr3.1:64270040-64270059 None:intergenic 50.0%
CACGTTGGACGAAGAGTGAA+AGG + chr3.1:64269343-64269362 None:intergenic 50.0%
CGAATCGCCGATAAAATCCG+CGG + chr3.1:64269553-64269572 None:intergenic 50.0%
CGAGGAACAGAGAAGAAGCT+AGG - chr3.1:64269512-64269531 MS.gene70600:CDS 50.0%
CGTGGCAACCATTTCAACTC+GGG - chr3.1:64269265-64269284 MS.gene70600:CDS 50.0%
GACAAGGGAGAATTGTGTGG+CGG - chr3.1:64270095-64270114 MS.gene70600:CDS 50.0%
GATATTCTCACACGCCGTGA+CGG - chr3.1:64269231-64269250 MS.gene70600:CDS 50.0%
GGACATTAACGACCCGGTAA+TGG + chr3.1:64268906-64268925 None:intergenic 50.0%
GTGGCAATGGAAAACACAGG+TGG - chr3.1:64268816-64268835 MS.gene70600:CDS 50.0%
TGAATCGCAGGAACATGCTG+CGG - chr3.1:64269720-64269739 MS.gene70600:CDS 50.0%
TGAGGGTGATTGAAGAGACG+GGG - chr3.1:64270190-64270209 MS.gene70600:CDS 50.0%
TGCAATGCTGGATGCCAATG+CGG - chr3.1:64270023-64270042 MS.gene70600:CDS 50.0%
TGCGGGTGCGTTGTTTAGTT+TGG - chr3.1:64269738-64269757 MS.gene70600:CDS 50.0%
TGGGTGGCAATGGAAAACAC+AGG - chr3.1:64268813-64268832 MS.gene70600:CDS 50.0%
TTCTCCACGGTGGTGTAATC+CGG + chr3.1:64269118-64269137 None:intergenic 50.0%
TTGAACGGAGAGACGTTCGA+AGG + chr3.1:64268957-64268976 None:intergenic 50.0%
TTTGTTGAGGGGGAATGAGC+TGG - chr3.1:64270062-64270081 MS.gene70600:CDS 50.0%
! ATGCTCGCCGCGGATTTTAT+CGG - chr3.1:64269543-64269562 MS.gene70600:CDS 50.0%
! CGAAAGCTGTGGAGGTTTTG+AGG - chr3.1:64270172-64270191 MS.gene70600:CDS 50.0%
! GGAGAAGGCTAAAAGGGTGT+TGG - chr3.1:64270227-64270246 MS.gene70600:CDS 50.0%
! GGTTCCGACGTTGCTTTCTA+TGG - chr3.1:64269927-64269946 MS.gene70600:CDS 50.0%
!! AGGGTGTTGGAGAAGATGAG+GGG - chr3.1:64270240-64270259 MS.gene70600:CDS 50.0%
!! GTGAAAGGTAAAGGCGTTCC+AGG + chr3.1:64269328-64269347 None:intergenic 50.0%
!! TATGGTGATGACGGGGACAA+TGG - chr3.1:64269945-64269964 MS.gene70600:CDS 50.0%
!! TGCCAATGCGGTGGATTGTT+TGG - chr3.1:64270035-64270054 MS.gene70600:CDS 50.0%
AATGCTGGATGCCAATGCGG+TGG - chr3.1:64270026-64270045 MS.gene70600:CDS 55.0%
AGGGGGATTCAGTGAATCGC+AGG - chr3.1:64269708-64269727 MS.gene70600:CDS 55.0%
GAAGGAAGCGAAAGCTGTGG+AGG - chr3.1:64270164-64270183 MS.gene70600:CDS 55.0%
GAATCGCAGGAACATGCTGC+GGG - chr3.1:64269721-64269740 MS.gene70600:CDS 55.0%
GACCTCAGCGCATGCATCAA+CGG + chr3.1:64269814-64269833 None:intergenic 55.0%
GCGTGTGAGAATATCACCGG+AGG + chr3.1:64269226-64269245 None:intergenic 55.0%
GGAACTGTTAAACGCGGTGG+CGG - chr3.1:64269195-64269214 MS.gene70600:CDS 55.0%
GGATGACTCGAACGAGGTAC+CGG - chr3.1:64270322-64270341 MS.gene70600:CDS 55.0%
GGCGACAAGGGAGAATTGTG+TGG - chr3.1:64270092-64270111 MS.gene70600:CDS 55.0%
GGCGAGGGAGAAGGCTAAAA+GGG - chr3.1:64270221-64270240 MS.gene70600:CDS 55.0%
GGTGATTGAAGAGACGGGGA+CGG - chr3.1:64270194-64270213 MS.gene70600:CDS 55.0%
GTTGATGCATGCGCTGAGGT+CGG - chr3.1:64269813-64269832 MS.gene70600:CDS 55.0%
TGAAGAGACGGGGACGGATA+GGG - chr3.1:64270200-64270219 MS.gene70600:CDS 55.0%
TGACCCGAAGAGACTACGAC+CGG + chr3.1:64268932-64268951 None:intergenic 55.0%
TGGCAATGTGTGTGGAGGGA+AGG - chr3.1:64269998-64270017 MS.gene70600:CDS 55.0%
TGGTGTAATCCGGTGCGGTT+GGG + chr3.1:64269108-64269127 None:intergenic 55.0%
TTGAAGAGACGGGGACGGAT+AGG - chr3.1:64270199-64270218 MS.gene70600:CDS 55.0%
! GATGACTCGAACGAGGTACC+GGG - chr3.1:64270323-64270342 MS.gene70600:CDS 55.0%
! GTGACGGAGTTAGGTACACG+TGG - chr3.1:64269247-64269266 MS.gene70600:CDS 55.0%
! TGGGTTCCGTTTTGCAGGAC+TGG + chr3.1:64269004-64269023 None:intergenic 55.0%
AGCCGTTGATGCATGCGCTG+AGG - chr3.1:64269809-64269828 MS.gene70600:CDS 60.0%
ATCCGGTGCGGTTGGGTGTA+CGG + chr3.1:64269101-64269120 None:intergenic 60.0%
CACGGTGGTGTAATCCGGTG+CGG + chr3.1:64269113-64269132 None:intergenic 60.0%
CGAAGAGACTACGACCGGGT+CGG + chr3.1:64268927-64268946 None:intergenic 60.0%
CGACCCGGTCGTAGTCTCTT+CGG - chr3.1:64268925-64268944 MS.gene70600:CDS 60.0%
CGGGTCGGACATTAACGACC+CGG + chr3.1:64268912-64268931 None:intergenic 60.0%
CGGGTCGTTAATGTCCGACC+CGG - chr3.1:64268910-64268929 MS.gene70600:CDS 60.0%
GACCCGAAGAGACTACGACC+GGG + chr3.1:64268931-64268950 None:intergenic 60.0%
GACCCGGTCGTAGTCTCTTC+GGG - chr3.1:64268926-64268945 MS.gene70600:CDS 60.0%
GACGGGGACAATGGCGAGTA+GGG - chr3.1:64269954-64269973 MS.gene70600:CDS 60.0%
GGAGGGAAGGACTGCAATGC+TGG - chr3.1:64270011-64270030 MS.gene70600:CDS 60.0%
GGCGAAGGAAGCGAAAGCTG+TGG - chr3.1:64270161-64270180 MS.gene70600:CDS 60.0%
GGGCGAGGGAGAAGGCTAAA+AGG - chr3.1:64270220-64270239 MS.gene70600:CDS 60.0%
GTGATAATCGCGGCGAGTCC+TGG - chr3.1:64269307-64269326 MS.gene70600:CDS 60.0%
GTGGTGTAATCCGGTGCGGT+TGG + chr3.1:64269109-64269128 None:intergenic 60.0%
TGACGGGGACAATGGCGAGT+AGG - chr3.1:64269953-64269972 MS.gene70600:CDS 60.0%
TGTTCCTACCTCCGGCAACC+CGG + chr3.1:64270344-64270363 None:intergenic 60.0%
! GGTCAACGCTGTTGCTTCGC+TGG - chr3.1:64269606-64269625 MS.gene70600:CDS 60.0%
! TCACACGCCGTGACGGAGTT+AGG - chr3.1:64269238-64269257 MS.gene70600:CDS 60.0%
!! CGGGTTGGGTTCCGTTTTGC+AGG + chr3.1:64269009-64269028 None:intergenic 60.0%
AGCTGGACTCCGAGGCGACA+AGG - chr3.1:64270079-64270098 MS.gene70600:CDS 65.0%
CACCGTACACCCAACCGCAC+CGG - chr3.1:64269096-64269115 MS.gene70600:CDS 65.0%
CGCACCGGATTACACCACCG+TGG - chr3.1:64269111-64269130 MS.gene70600:CDS 65.0%
CGGGTGGGATGACTCGAACG+AGG - chr3.1:64270316-64270335 MS.gene70600:CDS 65.0%
GACGGATAGGGCGAGGGAGA+AGG - chr3.1:64270212-64270231 MS.gene70600:CDS 65.0%
GCTGGACTCCGAGGCGACAA+GGG - chr3.1:64270080-64270099 MS.gene70600:CDS 65.0%
GGGGAATGAGCTGGACTCCG+AGG - chr3.1:64270071-64270090 MS.gene70600:CDS 65.0%
GGGTTTCGCTATGCTCGCCG+CGG - chr3.1:64269533-64269552 MS.gene70600:CDS 65.0%
GGTCGGAGTCTGAGCGAACG+AGG - chr3.1:64269830-64269849 MS.gene70600:CDS 65.0%
GTGCGGTTGGGTGTACGGTG+CGG + chr3.1:64269096-64269115 None:intergenic 65.0%
TGCGGTTGGGTGTACGGTGC+GGG + chr3.1:64269095-64269114 None:intergenic 65.0%
!! CGAACGAGGTACCGGGTTGC+CGG - chr3.1:64270330-64270349 MS.gene70600:CDS 65.0%
AGACGGGGACGGATAGGGCG+AGG - chr3.1:64270205-64270224 MS.gene70600:CDS 70.0%
GACGGGGACGGATAGGGCGA+GGG - chr3.1:64270206-64270225 MS.gene70600:CDS 70.0%
! GGTACCGGGTTGCCGGAGGT+AGG - chr3.1:64270337-64270356 MS.gene70600:CDS 70.0%
!! ACGAGGTACCGGGTTGCCGG+AGG - chr3.1:64270333-64270352 MS.gene70600:CDS 70.0%
!! CGCGGTGGCGGAGAATCCTC+CGG - chr3.1:64269207-64269226 MS.gene70600:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 64268812 64270392 64268812 ID=MS.gene70600
chr3.1 mRNA 64268812 64270392 64268812 ID=MS.gene70600.t1;Parent=MS.gene70600
chr3.1 exon 64268812 64270392 64268812 ID=MS.gene70600.t1.exon1;Parent=MS.gene70600.t1
chr3.1 CDS 64268812 64270392 64268812 ID=cds.MS.gene70600.t1;Parent=MS.gene70600.t1
Gene Sequence

>MS.gene70600

ATGGGTGGCAATGGAAAACACAGGTGGAAAATTTCCTTCCATCGTTCTTCTTCTCAATCCAAGCAACAACCTCCTAAAGAGTTTCTATGTCCCATTACCGGGTCGTTAATGTCCGACCCGGTCGTAGTCTCTTCGGGTCAAACCTTCGAACGTCTCTCCGTTCAAGTCTGCACCGATTTAAGCTTCATTCCAGTCCTGCAAAACGGAACCCAACCCGATTTCTCAACAATCATTCCCAACTTAGCTATCAAAACAACCATCGTAAACTGGTGCGACAAAACCCGCACCGTACACCCAACCGCACCGGATTACACCACCGTGGAGAATATTGTTAAAGAAAAAATGACGGCGGAGAAAGAGGATCTGATTAGGGTTTCTGAAAAGGAACTGTTAAACGCGGTGGCGGAGAATCCTCCGGTGATATTCTCACACGCCGTGACGGAGTTAGGTACACGTGGCAACCATTTCAACTCGGGATCTTCCTCAGAAGAATCTGTGATAATCGCGGCGAGTCCTGGAACGCCTTTACCTTTCACTCTTCGTCCAACGTGTTTTTCACCTTCTTCATCTTCATCGTTTGAGATCGAAGTTCAAAACCCTAACGTTCCTGTTTCGGAAGAAGAAGAAGCTCTATTGAAGAAGCTGAAGAGTAAAGAGGTTTTTGAGCAAGAACAAGGTTTAGTTTCGCTTAGGAGTATCACGAGGAACAGAGAAGAAGCTAGGGTTTCGCTATGCTCGCCGCGGATTTTATCGGCGATTCGTTCGTTGATTGATTCACGGTATGTTGTTGTTCAGGTCAACGCTGTTGCTTCGCTGGTCAACCTTTCGTTAGAGAAATCGAACAAGATGAGAATTGTGCGGTCAGGATTTGTTCCTTTTCTGATTGATGTGTTGAAAGGGGGATTCAGTGAATCGCAGGAACATGCTGCGGGTGCGTTGTTTAGTTTGGCTTTGGATGATGATAATAAAATGGCGATTGGTGTTCTTGGTGCATTGCAGCCGTTGATGCATGCGCTGAGGTCGGAGTCTGAGCGAACGAGGCATGATTCAGCGCTTGCGTTGTATCATTTAACTTTGGTTCAGAGTAATAGAGTTAAAATGGTGAAACTTGGGGTGGTTCCGACGTTGCTTTCTATGGTGATGACGGGGACAATGGCGAGTAGGGTGTTGTTGATTTTGTGTAATCTGGCAATGTGTGTGGAGGGAAGGACTGCAATGCTGGATGCCAATGCGGTGGATTGTTTGGTGAGTTTGTTGAGGGGGAATGAGCTGGACTCCGAGGCGACAAGGGAGAATTGTGTGGCGGCGTTGTATGCTTTGAGTCATGGGAGTTTGAGATTTAAAGGGTTGGCGAAGGAAGCGAAAGCTGTGGAGGTTTTGAGGGTGATTGAAGAGACGGGGACGGATAGGGCGAGGGAGAAGGCTAAAAGGGTGTTGGAGAAGATGAGGGGTTTTGGAGATGGTGATGATGAAGATGGTTCCGAGTTTGATAGTCTTTTTGAATCGGGTGGGATGACTCGAACGAGGTACCGGGTTGCCGGAGGTAGGAACAATAACCTTGTCAACTCAACTACATTTTAG

Protein sequence

>MS.gene70600.t1

MGGNGKHRWKISFHRSSSQSKQQPPKEFLCPITGSLMSDPVVVSSGQTFERLSVQVCTDLSFIPVLQNGTQPDFSTIIPNLAIKTTIVNWCDKTRTVHPTAPDYTTVENIVKEKMTAEKEDLIRVSEKELLNAVAENPPVIFSHAVTELGTRGNHFNSGSSSEESVIIAASPGTPLPFTLRPTCFSPSSSSSFEIEVQNPNVPVSEEEEALLKKLKSKEVFEQEQGLVSLRSITRNREEARVSLCSPRILSAIRSLIDSRYVVVQVNAVASLVNLSLEKSNKMRIVRSGFVPFLIDVLKGGFSESQEHAAGALFSLALDDDNKMAIGVLGALQPLMHALRSESERTRHDSALALYHLTLVQSNRVKMVKLGVVPTLLSMVMTGTMASRVLLILCNLAMCVEGRTAMLDANAVDCLVSLLRGNELDSEATRENCVAALYALSHGSLRFKGLAKEAKAVEVLRVIEETGTDRAREKAKRVLEKMRGFGDGDDEDGSEFDSLFESGGMTRTRYRVAGGRNNNLVNSTTF