Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96353.t1 | XP_003610057.2 | 97.4 | 764 | 20 | 0 | 1 | 764 | 73 | 836 | 0.00E+00 | 1451.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96353.t1 | Q92609 | 27.9 | 380 | 167 | 7 | 13 | 375 | 123 | 412 | 4.0e-30 | 134.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96353.t1 | G7JUA9 | 97.4 | 764 | 20 | 0 | 1 | 764 | 73 | 836 | 0.0e+00 | 1451.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene96353 | 0.848254 | 6.89E-60 | -1.69E-46 |
| MS.gene049159 | MS.gene96353 | 0.831376 | 1.73E-55 | -1.69E-46 |
| MS.gene049283 | MS.gene96353 | 0.829875 | 4.03E-55 | -1.69E-46 |
| MS.gene049368 | MS.gene96353 | 0.855801 | 4.94E-62 | -1.69E-46 |
| MS.gene049801 | MS.gene96353 | 0.818072 | 2.37E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene96353 | 0.885359 | 8.70E-72 | -1.69E-46 |
| MS.gene050085 | MS.gene96353 | 0.803423 | 3.51E-49 | -1.69E-46 |
| MS.gene050213 | MS.gene96353 | 0.828948 | 6.77E-55 | -1.69E-46 |
| MS.gene050359 | MS.gene96353 | 0.825893 | 3.66E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene96353 | 0.805962 | 1.04E-49 | -1.69E-46 |
| MS.gene050384 | MS.gene96353 | 0.846156 | 2.59E-59 | -1.69E-46 |
| MS.gene050386 | MS.gene96353 | 0.840366 | 9.08E-58 | -1.69E-46 |
| MS.gene050414 | MS.gene96353 | 0.814496 | 1.50E-51 | -1.69E-46 |
| MS.gene050551 | MS.gene96353 | 0.845519 | 3.86E-59 | -1.69E-46 |
| MS.gene050646 | MS.gene96353 | 0.860948 | 1.45E-63 | -1.69E-46 |
| MS.gene050654 | MS.gene96353 | 0.873408 | 1.51E-67 | -1.69E-46 |
| MS.gene050689 | MS.gene96353 | 0.830275 | 3.22E-55 | -1.69E-46 |
| MS.gene050759 | MS.gene96353 | 0.841793 | 3.83E-58 | -1.69E-46 |
| MS.gene050931 | MS.gene96353 | 0.812118 | 4.98E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene96353 | 0.803075 | 4.15E-49 | -1.69E-46 |
| MS.gene050962 | MS.gene96353 | 0.830985 | 2.16E-55 | -1.69E-46 |
| MS.gene051003 | MS.gene96353 | 0.808951 | 2.41E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene96353 | 0.838579 | 2.64E-57 | -1.69E-46 |
| MS.gene051209 | MS.gene96353 | 0.803872 | 2.83E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene96353 | 0.802023 | 6.83E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene96353 | 0.816538 | 5.25E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene96353 | 0.811347 | 7.33E-51 | -1.69E-46 |
| MS.gene051381 | MS.gene96353 | 0.814143 | 1.79E-51 | -1.69E-46 |
| MS.gene051676 | MS.gene96353 | 0.800095 | 1.69E-48 | -1.69E-46 |
| MS.gene051800 | MS.gene96353 | 0.829872 | 4.04E-55 | -1.69E-46 |
| MS.gene051856 | MS.gene96353 | 0.828383 | 9.27E-55 | -1.69E-46 |
| MS.gene051902 | MS.gene96353 | 0.805533 | 1.28E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene96353 | 0.8063 | 8.79E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene96353 | 0.827634 | 1.40E-54 | -1.69E-46 |
| MS.gene052052 | MS.gene96353 | 0.800457 | 1.43E-48 | -1.69E-46 |
| MS.gene052307 | MS.gene96353 | 0.826802 | 2.22E-54 | -1.69E-46 |
| MS.gene052342 | MS.gene96353 | 0.819485 | 1.13E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene96353 | 0.860205 | 2.43E-63 | -1.69E-46 |
| MS.gene052514 | MS.gene96353 | 0.804691 | 1.91E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene96353 | 0.834053 | 3.74E-56 | -1.69E-46 |
| MS.gene052609 | MS.gene96353 | 0.848192 | 7.17E-60 | -1.69E-46 |
| MS.gene052677 | MS.gene96353 | 0.800742 | 1.25E-48 | -1.69E-46 |
| MS.gene052775 | MS.gene96353 | 0.814503 | 1.49E-51 | -1.69E-46 |
| MS.gene052776 | MS.gene96353 | 0.833652 | 4.72E-56 | -1.69E-46 |
| MS.gene053079 | MS.gene96353 | 0.882036 | 1.46E-70 | -1.69E-46 |
| MS.gene053226 | MS.gene96353 | 0.802048 | 6.75E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene96353 | 0.803446 | 3.47E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene96353 | 0.812843 | 3.46E-51 | -1.69E-46 |
| MS.gene053931 | MS.gene96353 | 0.82259 | 2.18E-53 | -1.69E-46 |
| MS.gene054178 | MS.gene96353 | 0.806789 | 6.94E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene96353 | 0.824744 | 6.84E-54 | -1.69E-46 |
| MS.gene05458 | MS.gene96353 | 0.852974 | 3.25E-61 | -1.69E-46 |
| MS.gene054651 | MS.gene96353 | 0.817905 | 2.59E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene96353 | 0.820533 | 6.52E-53 | -1.69E-46 |
| MS.gene054893 | MS.gene96353 | 0.822201 | 2.69E-53 | -1.69E-46 |
| MS.gene05517 | MS.gene96353 | 0.818771 | 1.65E-52 | -1.69E-46 |
| MS.gene055222 | MS.gene96353 | 0.818322 | 2.08E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene96353 | 0.807221 | 5.62E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene96353 | 0.837198 | 5.99E-57 | -1.69E-46 |
| MS.gene05552 | MS.gene96353 | 0.801168 | 1.02E-48 | -1.69E-46 |
| MS.gene055864 | MS.gene96353 | 0.827458 | 1.55E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene96353 | 0.827963 | 1.17E-54 | -1.69E-46 |
| MS.gene056045 | MS.gene96353 | 0.854357 | 1.30E-61 | -1.69E-46 |
| MS.gene056174 | MS.gene96353 | 0.801569 | 8.46E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene96353 | 0.865062 | 7.75E-65 | -1.69E-46 |
| MS.gene056308 | MS.gene96353 | 0.820213 | 7.72E-53 | -1.69E-46 |
| MS.gene056507 | MS.gene96353 | 0.816009 | 6.90E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene96353 | 0.806482 | 8.05E-50 | -1.69E-46 |
| MS.gene056831 | MS.gene96353 | 0.81799 | 2.48E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene96353 | 0.84885 | 4.71E-60 | -1.69E-46 |
| MS.gene056973 | MS.gene96353 | 0.823441 | 1.38E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene96353 | 0.805503 | 1.29E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene96353 | 0.822879 | 1.87E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene96353 | 0.843988 | 9.98E-59 | -1.69E-46 |
| MS.gene058010 | MS.gene96353 | 0.813443 | 2.55E-51 | -1.69E-46 |
| MS.gene058054 | MS.gene96353 | 0.805609 | 1.23E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene96353 | 0.818938 | 1.51E-52 | -1.69E-46 |
| MS.gene058289 | MS.gene96353 | 0.804082 | 2.56E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene96353 | 0.832092 | 1.15E-55 | -1.69E-46 |
| MS.gene058429 | MS.gene96353 | 0.81346 | 2.53E-51 | -1.69E-46 |
| MS.gene058638 | MS.gene96353 | 0.806008 | 1.01E-49 | -1.69E-46 |
| MS.gene058639 | MS.gene96353 | 0.811453 | 6.95E-51 | -1.69E-46 |
| MS.gene058647 | MS.gene96353 | 0.811427 | 7.04E-51 | -1.69E-46 |
| MS.gene058781 | MS.gene96353 | 0.811414 | 7.09E-51 | -1.69E-46 |
| MS.gene058783 | MS.gene96353 | 0.800158 | 1.64E-48 | -1.69E-46 |
| MS.gene058919 | MS.gene96353 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene059146 | MS.gene96353 | 0.805142 | 1.54E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene96353 | 0.836062 | 1.17E-56 | -1.69E-46 |
| MS.gene05978 | MS.gene96353 | 0.811053 | 8.48E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene96353 | 0.818141 | 2.29E-52 | -1.69E-46 |
| MS.gene059965 | MS.gene96353 | 0.817576 | 3.07E-52 | -1.69E-46 |
| MS.gene060259 | MS.gene96353 | 0.849949 | 2.33E-60 | -1.69E-46 |
| MS.gene060435 | MS.gene96353 | 0.818989 | 1.47E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene96353 | 0.815586 | 8.57E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene96353 | 0.819157 | 1.35E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene96353 | 0.854075 | 1.57E-61 | -1.69E-46 |
| MS.gene060935 | MS.gene96353 | 0.842534 | 2.44E-58 | -1.69E-46 |
| MS.gene060937 | MS.gene96353 | 0.850309 | 1.85E-60 | -1.69E-46 |
| MS.gene061006 | MS.gene96353 | 0.806081 | 9.78E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene96353 | 0.844471 | 7.41E-59 | -1.69E-46 |
| MS.gene061160 | MS.gene96353 | 0.805554 | 1.26E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 150 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTATTCTCCTGTTGC+TGG | 0.195760 | 8.1:-11387203 | MS.gene96353:CDS |
| TGGAAATAGTTGCCATGTTC+TGG | 0.229971 | 8.1:+11388278 | None:intergenic |
| ATGGGAACTTTAAAGAATAT+TGG | 0.231802 | 8.1:-11385778 | MS.gene96353:CDS |
| TTTATCAGATAATAGTAAAA+TGG | 0.259709 | 8.1:-11386982 | MS.gene96353:CDS |
| TTCCAATGGCTTTGGAAGTT+TGG | 0.270410 | 8.1:-11385964 | MS.gene96353:CDS |
| GAAATTCGGCCACACTTTCT+AGG | 0.287597 | 8.1:-11386005 | MS.gene96353:CDS |
| AACAATCAAGAGTGGTAAAA+AGG | 0.290842 | 8.1:-11386448 | MS.gene96353:CDS |
| CCTGTTGCTGGGTCCCATAC+TGG | 0.298750 | 8.1:-11387191 | MS.gene96353:CDS |
| TCTTCCCAGTAGCTATTATC+AGG | 0.301549 | 8.1:+11386606 | None:intergenic |
| TGGAAGTTTGGTCGTAATAA+TGG | 0.314220 | 8.1:-11385952 | MS.gene96353:CDS |
| ACCACCATTGCATGTGAATC+AGG | 0.320017 | 8.1:-11386657 | MS.gene96353:CDS |
| TTAAAGTTCCCATCACATTC+TGG | 0.329403 | 8.1:+11385788 | None:intergenic |
| TGAATAAATTCCAATGGCTT+TGG | 0.340110 | 8.1:-11385972 | MS.gene96353:CDS |
| AACACAATGGTCTGTATCTT+AGG | 0.344300 | 8.1:+11387359 | None:intergenic |
| TTCCCTGACCACACTCTTGT+TGG | 0.349187 | 8.1:+11385583 | None:intergenic |
| TGGGAACTTTAAAGAATATT+GGG | 0.350164 | 8.1:-11385777 | MS.gene96353:CDS |
| TCATGATATTTGAACTCATT+AGG | 0.352589 | 8.1:+11386183 | None:intergenic |
| GCAGCAGAAGCTTCAATTAC+AGG | 0.367492 | 8.1:+11387161 | None:intergenic |
| GTGTTGCTAAGTGATGCTTA+TGG | 0.369479 | 8.1:-11387341 | MS.gene96353:CDS |
| ACTTTGATCGTTATACTTGT+TGG | 0.372163 | 8.1:+11385879 | None:intergenic |
| TGTTGCTAAGTGATGCTTAT+GGG | 0.373836 | 8.1:-11387340 | MS.gene96353:CDS |
| TTGACAACCTCTTGATCGTC+TGG | 0.376659 | 8.1:-11387016 | MS.gene96353:CDS |
| GTCCATGCTTGAGCATATTC+AGG | 0.378528 | 8.1:-11385752 | MS.gene96353:intron |
| TTATCAGGTAATAAACTCTT+AGG | 0.382184 | 8.1:+11386621 | None:intergenic |
| TAATGATTCCACAGGAAATT+CGG | 0.392355 | 8.1:-11386019 | MS.gene96353:CDS |
| GTTTAAGTTCTTCAGCACTA+TGG | 0.400618 | 8.1:+11386568 | None:intergenic |
| TTACAGGTGGCAAACCAGTA+TGG | 0.402275 | 8.1:+11387177 | None:intergenic |
| GGCAACTATTTCCAGACAAA+AGG | 0.406937 | 8.1:-11388269 | MS.gene96353:CDS |
| TTCTTCTGACCCAAGTTCCT+TGG | 0.407632 | 8.1:+11386383 | None:intergenic |
| GGGTTGTCCATGACAAGATT+TGG | 0.413427 | 8.1:+11389190 | None:intergenic |
| GCTGGAGAGGATGGTGGATC+AGG | 0.417731 | 8.1:-11388318 | MS.gene96353:CDS |
| CTTTATATGCAGATAGTACA+TGG | 0.422407 | 8.1:-11388364 | MS.gene96353:intron |
| TATAGCCATCTCGTTGATCT+CGG | 0.425792 | 8.1:-11387101 | MS.gene96353:CDS |
| CTCTTGATTGTTGACGAAGA+TGG | 0.426953 | 8.1:+11386459 | None:intergenic |
| AGCAACCTATCTCCGGTGGC+AGG | 0.427699 | 8.1:-11386048 | MS.gene96353:CDS |
| CTGGGAAGCTTAATAATCTC+TGG | 0.432714 | 8.1:+11386817 | None:intergenic |
| ATAGCCATCTCGTTGATCTC+GGG | 0.436878 | 8.1:-11387100 | MS.gene96353:CDS |
| TCTCTTATTCTCCTGTTGCT+GGG | 0.437137 | 8.1:-11387202 | MS.gene96353:CDS |
| TTATGGGGTTGAAGGTGAAC+TGG | 0.438731 | 8.1:-11387324 | MS.gene96353:CDS |
| GAAGATCTATCCAAGGAACT+TGG | 0.440583 | 8.1:-11386393 | MS.gene96353:CDS |
| GGAAATAGTTGCCATGTTCT+GGG | 0.450619 | 8.1:+11388279 | None:intergenic |
| CCAGTATGGGACCCAGCAAC+AGG | 0.457235 | 8.1:+11387191 | None:intergenic |
| TATTACCTGATAATAGCTAC+TGG | 0.465123 | 8.1:-11386611 | MS.gene96353:CDS |
| CTCTCAGGATGATCAGAGAT+TGG | 0.467104 | 8.1:+11386069 | None:intergenic |
| TGTTTGAAGCTTTAATGAAT+GGG | 0.467577 | 8.1:-11387256 | MS.gene96353:CDS |
| TGCGCCCTGCCACCGGAGAT+AGG | 0.468340 | 8.1:+11386043 | None:intergenic |
| GAAATCGGTTCTCACGGAAA+AGG | 0.478306 | 8.1:-11387413 | MS.gene96353:CDS |
| GTCTCACAGGAAAGTAGTGT+TGG | 0.483922 | 8.1:-11386156 | MS.gene96353:CDS |
| CAAGGCGCTCCACATCAACT+TGG | 0.486995 | 8.1:+11387555 | None:intergenic |
| GTGTGGTCAGGGAACTTCAT+TGG | 0.489228 | 8.1:-11385574 | MS.gene96353:CDS |
| TACTGCCATGTCAGCTCTCA+AGG | 0.492107 | 8.1:-11385508 | MS.gene96353:CDS |
| GACTTGACGGATGACGAAAT+CGG | 0.492393 | 8.1:-11387428 | MS.gene96353:CDS |
| TTTCCAACAAGAGTGTGGTC+AGG | 0.497315 | 8.1:-11385586 | MS.gene96353:CDS |
| TAGTTTGAGAGGGCGGCTCC+TGG | 0.499264 | 8.1:-11389248 | MS.gene96353:CDS |
| AGTGATGCTTATGGGGTTGA+AGG | 0.500001 | 8.1:-11387332 | MS.gene96353:CDS |
| ATGTTTGAAGCTTTAATGAA+TGG | 0.501384 | 8.1:-11387257 | MS.gene96353:CDS |
| AAATTTCATTAATTTCATCA+AGG | 0.506660 | 8.1:+11386121 | None:intergenic |
| ACCGGAGATAGGTTGCTCTC+AGG | 0.509000 | 8.1:+11386054 | None:intergenic |
| TCATTATTGCGCCCTGCCAC+CGG | 0.512914 | 8.1:+11386036 | None:intergenic |
| CTACAGAATGATTATCCTGC+TGG | 0.514134 | 8.1:+11386325 | None:intergenic |
| GACCAAACTTCCAAAGCCAT+TGG | 0.515271 | 8.1:+11385962 | None:intergenic |
| CGTCTCACATCTCAGACAAA+AGG | 0.517629 | 8.1:+11385466 | None:intergenic |
| GCTTAATAATCTCTGGAGAC+AGG | 0.520951 | 8.1:+11386824 | None:intergenic |
| GCTGAAGAACTTAAACAAGA+TGG | 0.522754 | 8.1:-11386561 | MS.gene96353:CDS |
| TCCTGAGAGCAACCTATCTC+CGG | 0.524052 | 8.1:-11386055 | MS.gene96353:CDS |
| CAATGCAGAGCTGGAGAGGA+TGG | 0.530243 | 8.1:-11388327 | MS.gene96353:CDS |
| AAGATCACCAGCTGTAGAAG+AGG | 0.531139 | 8.1:+11385846 | None:intergenic |
| TCTGACATAAGCAACAATTA+CGG | 0.532883 | 8.1:-11386273 | MS.gene96353:CDS |
| TTCACAATGCAGAGCTGGAG+AGG | 0.533828 | 8.1:-11388331 | MS.gene96353:CDS |
| GCAACTATTTCCAGACAAAA+GGG | 0.537102 | 8.1:-11388268 | MS.gene96353:CDS |
| GTCAGGTATGCTAGTTTGAG+AGG | 0.540089 | 8.1:-11389259 | None:intergenic |
| ATAGCTACTGGGAAGAAAAG+TGG | 0.540693 | 8.1:-11386599 | MS.gene96353:CDS |
| TTATGTTCTCCAAGTTGATG+TGG | 0.541208 | 8.1:-11387564 | MS.gene96353:CDS |
| GTATCATTTATTGTCGCATG+TGG | 0.542626 | 8.1:-11387135 | MS.gene96353:CDS |
| AAGCTCCTTGAGAGCTGACA+TGG | 0.543178 | 8.1:+11385503 | None:intergenic |
| TTGTTATATTCTACAAGCGC+AGG | 0.545602 | 8.1:+11386711 | None:intergenic |
| TCATGAAACATTATGCCAGC+AGG | 0.547111 | 8.1:-11386340 | MS.gene96353:CDS |
| ACCTTGTCTATAACCACACT+CGG | 0.548812 | 8.1:+11388196 | None:intergenic |
| AATTTCATTAATTTCATCAA+GGG | 0.549080 | 8.1:+11386122 | None:intergenic |
| TACAGGTGGCAAACCAGTAT+GGG | 0.551405 | 8.1:+11387178 | None:intergenic |
| TTCCAACAAGAGTGTGGTCA+GGG | 0.551719 | 8.1:-11385585 | MS.gene96353:CDS |
| GAAGAAGATATAGAAAATCT+CGG | 0.552372 | 8.1:-11386366 | MS.gene96353:CDS |
| GGATGATCAGAGATTGGAAG+AGG | 0.553620 | 8.1:+11386075 | None:intergenic |
| ATATCATGAAAATGTCTCAC+AGG | 0.553655 | 8.1:-11386169 | MS.gene96353:CDS |
| ACAGCTTCCTCTTCTACAGC+TGG | 0.554308 | 8.1:-11385853 | MS.gene96353:CDS |
| GCTTTAATGAATGGGGCTCA+CGG | 0.557113 | 8.1:-11387248 | MS.gene96353:CDS |
| GAGGCAGAGCAACAAGATGA+TGG | 0.560054 | 8.1:-11386297 | MS.gene96353:CDS |
| GATTGGAAGAGGTGAATCGA+TGG | 0.561413 | 8.1:+11386086 | None:intergenic |
| TCTCACAGGAAAGTAGTGTT+GGG | 0.563238 | 8.1:-11386155 | MS.gene96353:CDS |
| ACTTTCATCCTTTGTAACGT+GGG | 0.565238 | 8.1:+11389219 | None:intergenic |
| AAATCCGTCTCAATATGCCT+TGG | 0.567226 | 8.1:+11388243 | None:intergenic |
| GGGCGCAATAATGATTCCAC+AGG | 0.567344 | 8.1:-11386027 | MS.gene96353:CDS |
| TTCTACAAGCGCAGGTGTCG+AGG | 0.567649 | 8.1:+11386719 | None:intergenic |
| CACAGTACTTTGCTCTACGC+TGG | 0.568902 | 8.1:-11387070 | MS.gene96353:CDS |
| GTTTGAAGCTTTAATGAATG+GGG | 0.569176 | 8.1:-11387255 | MS.gene96353:CDS |
| ACTCATTAGGAGAACTAGCT+AGG | 0.569589 | 8.1:+11386196 | None:intergenic |
| GGCTCACGGTTCAGTTGCAA+TGG | 0.571038 | 8.1:-11387234 | MS.gene96353:CDS |
| TAATCATTCTGTAGCAGTTG+AGG | 0.571250 | 8.1:-11386316 | MS.gene96353:CDS |
| TTCCAGACAAAAGGGTGCCA+AGG | 0.572383 | 8.1:-11388260 | MS.gene96353:CDS |
| TATGGGGTTGAAGGTGAACT+GGG | 0.574976 | 8.1:-11387323 | MS.gene96353:CDS |
| AAGATCTATCCAAGGAACTT+GGG | 0.576219 | 8.1:-11386392 | MS.gene96353:CDS |
| CCCGAGTGTGGTTATAGACA+AGG | 0.580071 | 8.1:-11388197 | MS.gene96353:intron |
| AGGATCTTTCATTCATCTCG+CGG | 0.583363 | 8.1:-11386924 | MS.gene96353:CDS |
| TTGTAACGTGGGGATCAACC+AGG | 0.583633 | 8.1:+11389230 | None:intergenic |
| GTTGCTAAGTGATGCTTATG+GGG | 0.585951 | 8.1:-11387339 | MS.gene96353:CDS |
| TACTTTCATCCTTTGTAACG+TGG | 0.587230 | 8.1:+11389218 | None:intergenic |
| TAGCCATCTCGTTGATCTCG+GGG | 0.587269 | 8.1:-11387099 | MS.gene96353:CDS |
| GCAACCTATCTCCGGTGGCA+GGG | 0.587568 | 8.1:-11386047 | MS.gene96353:CDS |
| GGTTGATCCCCACGTTACAA+AGG | 0.589815 | 8.1:-11389227 | MS.gene96353:CDS |
| TTTATATGCAGATAGTACAT+GGG | 0.590854 | 8.1:-11388363 | MS.gene96353:intron |
| TGACAACCTCTTGATCGTCT+GGG | 0.594198 | 8.1:-11387015 | MS.gene96353:CDS |
| TAAAACTGAATAAATTCCAA+TGG | 0.598877 | 8.1:-11385978 | MS.gene96353:CDS |
| ATTACCTGATAATAGCTACT+GGG | 0.602058 | 8.1:-11386610 | MS.gene96353:CDS |
| TTCTGCTGACCAGAATGTGA+TGG | 0.603860 | 8.1:-11385797 | MS.gene96353:CDS |
| ACTTAATGCAAGAGTCTGCA+AGG | 0.606324 | 8.1:+11386755 | None:intergenic |
| TTTCATCCCAGACGATCAAG+AGG | 0.607164 | 8.1:+11387009 | None:intergenic |
| CTTTCATCCTTTGTAACGTG+GGG | 0.608769 | 8.1:+11389220 | None:intergenic |
| ATTGGAAGAGGTGAATCGAT+GGG | 0.609774 | 8.1:+11386087 | None:intergenic |
| GAAAAGAGTACTTGCTTCTG+AGG | 0.610033 | 8.1:-11385914 | MS.gene96353:CDS |
| TGCAGAGCTGGAGAGGATGG+TGG | 0.616704 | 8.1:-11388324 | MS.gene96353:CDS |
| TTTGTTAGAAGATCTATCCA+AGG | 0.617410 | 8.1:-11386400 | MS.gene96353:CDS |
| TAGTTCACCAAATCTTGTCA+TGG | 0.618965 | 8.1:-11389197 | MS.gene96353:CDS |
| TCACGTTTATACCCAGAACA+TGG | 0.622550 | 8.1:-11388290 | MS.gene96353:CDS |
| TCAGGTATGCTAGTTTGAGA+GGG | 0.624547 | 8.1:-11389258 | None:intergenic |
| ACTTGGAGAACATAAAGCAA+AGG | 0.628302 | 8.1:+11387572 | None:intergenic |
| TACCTGAATATGCTCAAGCA+TGG | 0.637984 | 8.1:+11385750 | None:intergenic |
| CAACCCCGAGATCAACGAGA+TGG | 0.640135 | 8.1:+11387096 | None:intergenic |
| GGTATGCTAGTTTGAGAGGG+CGG | 0.644507 | 8.1:-11389255 | MS.gene96353:CDS |
| TCTGCTGACCAGAATGTGAT+GGG | 0.647152 | 8.1:-11385796 | MS.gene96353:CDS |
| GATGACGAAATCGGTTCTCA+CGG | 0.647201 | 8.1:-11387419 | MS.gene96353:CDS |
| TGAACCTGATTCACATGCAA+TGG | 0.648752 | 8.1:+11386653 | None:intergenic |
| AATCTCTGGAGACAGGTCGT+AGG | 0.651148 | 8.1:+11386831 | None:intergenic |
| TAAAATGGAAAAGCATGCAG+AGG | 0.651374 | 8.1:-11386967 | MS.gene96353:CDS |
| GGTGCCAAGGCATATTGAGA+CGG | 0.652499 | 8.1:-11388247 | MS.gene96353:CDS |
| ATTTATCTCAGCTATTGCTG+TGG | 0.655369 | 8.1:-11386898 | MS.gene96353:CDS |
| CTTGTAGAATATAACAACAA+GGG | 0.657239 | 8.1:-11386705 | MS.gene96353:CDS |
| CCTTGTCTATAACCACACTC+GGG | 0.658075 | 8.1:+11388197 | None:intergenic |
| GCTTGTAGAATATAACAACA+AGG | 0.658953 | 8.1:-11386706 | MS.gene96353:CDS |
| ACCTGATTCACATGCAATGG+TGG | 0.659619 | 8.1:+11386656 | None:intergenic |
| TCTGCTTTCCAACAAGAGTG+TGG | 0.661245 | 8.1:-11385591 | MS.gene96353:CDS |
| AGATGTCTTAGCAGAAACAC+CGG | 0.661553 | 8.1:-11386240 | MS.gene96353:CDS |
| AAGTGTGGCCGAATTTCCTG+TGG | 0.661701 | 8.1:+11386011 | None:intergenic |
| TGAGAGCAACCTATCTCCGG+TGG | 0.662239 | 8.1:-11386052 | MS.gene96353:CDS |
| TCTTCGTCAACAATCAAGAG+TGG | 0.663979 | 8.1:-11386456 | MS.gene96353:CDS |
| TGTCTTAGACATCCCGAGTG+TGG | 0.664217 | 8.1:-11388209 | MS.gene96353:CDS |
| TTATATGCAGATAGTACATG+GGG | 0.672097 | 8.1:-11388362 | MS.gene96353:intron |
| GCAGAAGCTTCAATTACAGG+TGG | 0.678657 | 8.1:+11387164 | None:intergenic |
| AGCATCACTTAGCAACACAA+TGG | 0.690065 | 8.1:+11387346 | None:intergenic |
| TAGCAGAAACACCGGCAGCG+AGG | 0.719930 | 8.1:-11386232 | MS.gene96353:CDS |
| CAGCGTAGAGCAAAGTACTG+TGG | 0.720652 | 8.1:+11387071 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTCATTAATTTCATCA+AGG | + | chr8.1:11388606-11388625 | None:intergenic | 15.0% |
| !! | AATTTCATTAATTTCATCAA+GGG | + | chr8.1:11388605-11388624 | None:intergenic | 15.0% |
| !! | ACATAGTTTGATATAAATTA+TGG | + | chr8.1:11385818-11385837 | None:intergenic | 15.0% |
| !! | ACTAAAATTTAAAAACAAGT+TGG | - | chr8.1:11389015-11389034 | MS.gene96353:intron | 15.0% |
| !! | GTAGAAATAAATATATAATC+TGG | + | chr8.1:11385785-11385804 | None:intergenic | 15.0% |
| !! | TTTAGTTAACTAGTAAAAAA+CGG | - | chr8.1:11386754-11386773 | MS.gene96353:CDS | 15.0% |
| !! | TTTATCAGATAATAGTAAAA+TGG | - | chr8.1:11387742-11387761 | MS.gene96353:intron | 15.0% |
| !!! | CTTCTTTTTATTTATTTTGT+AGG | - | chr8.1:11387110-11387129 | MS.gene96353:CDS | 15.0% |
| !!! | TTTTATTCATACAGATAATA+TGG | + | chr8.1:11386908-11386927 | None:intergenic | 15.0% |
| !!! | TTTTGTCATATAATCTTTAA+TGG | - | chr8.1:11386847-11386866 | MS.gene96353:CDS | 15.0% |
| !! | AAAATGAAAACTGAAAACAT+TGG | + | chr8.1:11385988-11386007 | None:intergenic | 20.0% |
| !! | AAAATTTGCAATGATTTACT+TGG | + | chr8.1:11385573-11385592 | None:intergenic | 20.0% |
| !! | AATAGAAGATAAGAAACTAA+GGG | - | chr8.1:11385952-11385971 | MS.gene96353:CDS | 20.0% |
| !! | CATAACATAAACAAGTTATA+CGG | + | chr8.1:11387051-11387070 | None:intergenic | 20.0% |
| !! | TAAAACTGAATAAATTCCAA+TGG | - | chr8.1:11388746-11388765 | MS.gene96353:intron | 20.0% |
| !! | TAATAGAAGATAAGAAACTA+AGG | - | chr8.1:11385951-11385970 | MS.gene96353:CDS | 20.0% |
| !! | TTGATATAAATTATGGAAGT+TGG | + | chr8.1:11385811-11385830 | None:intergenic | 20.0% |
| !! | TTTATATCAAACTATGTTTC+CGG | - | chr8.1:11385821-11385840 | MS.gene96353:CDS | 20.0% |
| !!! | ACATTAAATGATTAACTTGT+TGG | - | chr8.1:11386974-11386993 | MS.gene96353:CDS | 20.0% |
| ! | AAAAAGAAGCTCATTAATGT+TGG | + | chr8.1:11387099-11387118 | None:intergenic | 25.0% |
| ! | AAGGTTAAGCTAAACAATAA+TGG | - | chr8.1:11385895-11385914 | MS.gene96353:CDS | 25.0% |
| ! | ACTAAAGCTTTCATTCAATT+AGG | + | chr8.1:11386740-11386759 | None:intergenic | 25.0% |
| ! | ACTGAGTAAATAGGAATTTA+TGG | + | chr8.1:11385652-11385671 | None:intergenic | 25.0% |
| ! | ATAAATCTATTTCCAGCATT+TGG | - | chr8.1:11385615-11385634 | MS.gene96353:intron | 25.0% |
| ! | ATAGAAGATAAGAAACTAAG+GGG | - | chr8.1:11385953-11385972 | MS.gene96353:CDS | 25.0% |
| ! | ATTTATCCAGATGACATAAT+GGG | + | chr8.1:11385601-11385620 | None:intergenic | 25.0% |
| ! | CAATTATGATAGAGAGAATA+TGG | + | chr8.1:11386153-11386172 | None:intergenic | 25.0% |
| ! | CTTGTAGAATATAACAACAA+GGG | - | chr8.1:11388019-11388038 | MS.gene96353:intron | 25.0% |
| ! | GAAAACAAATAGATGGATAA+TGG | + | chr8.1:11385760-11385779 | None:intergenic | 25.0% |
| ! | GAAGAAGATATAGAAAATCT+CGG | - | chr8.1:11388358-11388377 | MS.gene96353:intron | 25.0% |
| ! | TAAAAAATCTTCAGACTTGA+CGG | - | chr8.1:11387283-11387302 | MS.gene96353:CDS | 25.0% |
| ! | TCATGATATTTGAACTCATT+AGG | + | chr8.1:11388544-11388563 | None:intergenic | 25.0% |
| ! | TTATATCAAACTATGTTTCC+GGG | - | chr8.1:11385822-11385841 | MS.gene96353:CDS | 25.0% |
| ! | TTATCAGGTAATAAACTCTT+AGG | + | chr8.1:11388106-11388125 | None:intergenic | 25.0% |
| ! | TTCATAATTCATCAAGTATC+AGG | + | chr8.1:11387004-11387023 | None:intergenic | 25.0% |
| ! | TTTATATGCAGATAGTACAT+GGG | - | chr8.1:11386361-11386380 | MS.gene96353:CDS | 25.0% |
| !! | AATAAACTCTTAGGAGTTTT+TGG | + | chr8.1:11388097-11388116 | None:intergenic | 25.0% |
| !! | ATGGGAACTTTAAAGAATAT+TGG | - | chr8.1:11388946-11388965 | MS.gene96353:intron | 25.0% |
| !! | ATGTTTGAAGCTTTAATGAA+TGG | - | chr8.1:11387467-11387486 | MS.gene96353:CDS | 25.0% |
| !! | GCATTTTCAGAAATTTTGAA+AGG | - | chr8.1:11386076-11386095 | MS.gene96353:CDS | 25.0% |
| !! | TAGTACGTCTAAAAATGTTT+TGG | - | chr8.1:11389177-11389196 | MS.gene96353:CDS | 25.0% |
| !! | TGCAGTACTGTTAATTTTAA+TGG | - | chr8.1:11388901-11388920 | MS.gene96353:intron | 25.0% |
| !! | TGGGAACTTTAAAGAATATT+GGG | - | chr8.1:11388947-11388966 | MS.gene96353:intron | 25.0% |
| !! | TGTTTGAAGCTTTAATGAAT+GGG | - | chr8.1:11387468-11387487 | MS.gene96353:CDS | 25.0% |
| !! | TTTTAATGTTTGTGTTCTCT+GGG | + | chr8.1:11387928-11387947 | None:intergenic | 25.0% |
| !! | TTTTATATTCCTAGAAAGTG+TGG | + | chr8.1:11388731-11388750 | None:intergenic | 25.0% |
| !! | TTTTTAATGTTTGTGTTCTC+TGG | + | chr8.1:11387929-11387948 | None:intergenic | 25.0% |
| !!! | ATTTACTTTTCCTTCTAACT+CGG | - | chr8.1:11386628-11386647 | MS.gene96353:CDS | 25.0% |
| !!! | GCTAGATTTGTTTTCAAAAA+CGG | + | chr8.1:11386058-11386077 | None:intergenic | 25.0% |
| !!! | TGAGACGGATTTTATTATTA+TGG | - | chr8.1:11386492-11386511 | MS.gene96353:CDS | 25.0% |
| !!! | TTCGTTTTAAATTGCTAACA+AGG | + | chr8.1:11386199-11386218 | None:intergenic | 25.0% |
| AACAATCAAGAGTGGTAAAA+AGG | - | chr8.1:11388276-11388295 | MS.gene96353:CDS | 30.0% | |
| ACTTTGATCGTTATACTTGT+TGG | + | chr8.1:11388848-11388867 | None:intergenic | 30.0% | |
| AGGAATTTATGGCAGTATAA+CGG | + | chr8.1:11385641-11385660 | None:intergenic | 30.0% | |
| ATATCATGAAAATGTCTCAC+AGG | - | chr8.1:11388555-11388574 | MS.gene96353:intron | 30.0% | |
| ATTACCTGATAATAGCTACT+GGG | - | chr8.1:11388114-11388133 | MS.gene96353:intron | 30.0% | |
| CTTTATATGCAGATAGTACA+TGG | - | chr8.1:11386360-11386379 | MS.gene96353:CDS | 30.0% | |
| GAAAAATAGATGGACAGAAA+AGG | - | chr8.1:11388210-11388229 | MS.gene96353:CDS | 30.0% | |
| GATTTATCCAGATGACATAA+TGG | + | chr8.1:11385602-11385621 | None:intergenic | 30.0% | |
| GCTTGTAGAATATAACAACA+AGG | - | chr8.1:11388018-11388037 | MS.gene96353:intron | 30.0% | |
| GTTTCAGAGAAGTTATGTTA+AGG | - | chr8.1:11389081-11389100 | MS.gene96353:intron | 30.0% | |
| TAAACAAGTTATACGGAATC+TGG | + | chr8.1:11387044-11387063 | None:intergenic | 30.0% | |
| TAAATACGTTTGCTCACTTT+GGG | - | chr8.1:11386600-11386619 | MS.gene96353:CDS | 30.0% | |
| TAATGATTCCACAGGAAATT+CGG | - | chr8.1:11388705-11388724 | MS.gene96353:intron | 30.0% | |
| TATTACCTGATAATAGCTAC+TGG | - | chr8.1:11388113-11388132 | MS.gene96353:intron | 30.0% | |
| TCTGACATAAGCAACAATTA+CGG | - | chr8.1:11388451-11388470 | MS.gene96353:intron | 30.0% | |
| TGAATAAATTCCAATGGCTT+TGG | - | chr8.1:11388752-11388771 | MS.gene96353:intron | 30.0% | |
| TTAAATTGCTAACAAGGAGA+TGG | + | chr8.1:11386193-11386212 | None:intergenic | 30.0% | |
| TTATATGCAGATAGTACATG+GGG | - | chr8.1:11386362-11386381 | MS.gene96353:CDS | 30.0% | |
| TTCCATCTCAGAAAAATAGA+TGG | - | chr8.1:11388200-11388219 | MS.gene96353:CDS | 30.0% | |
| TTGCTCTATACTGAGTAAAT+AGG | + | chr8.1:11385661-11385680 | None:intergenic | 30.0% | |
| TTTATCCAGATGACATAATG+GGG | + | chr8.1:11385600-11385619 | None:intergenic | 30.0% | |
| TTTGTTAGAAGATCTATCCA+AGG | - | chr8.1:11388324-11388343 | MS.gene96353:CDS | 30.0% | |
| ! | AACAAATAGATGGATAATGG+AGG | + | chr8.1:11385757-11385776 | None:intergenic | 30.0% |
| ! | ATGTTTTCAGAAAGTAAACG+CGG | - | chr8.1:11386245-11386264 | MS.gene96353:CDS | 30.0% |
| ! | CATTTTACAGACAGATTTGA+TGG | - | chr8.1:11387218-11387237 | MS.gene96353:CDS | 30.0% |
| ! | GTTTGAAGCTTTAATGAATG+GGG | - | chr8.1:11387469-11387488 | MS.gene96353:CDS | 30.0% |
| ! | TTACTTGGATTTTGTGAAAG+CGG | + | chr8.1:11385558-11385577 | None:intergenic | 30.0% |
| !! | ATTTGTTTTCAAAAACGGTG+AGG | + | chr8.1:11386053-11386072 | None:intergenic | 30.0% |
| !!! | AAAAATGTTTTGGTTGGCAA+AGG | - | chr8.1:11389187-11389206 | MS.gene96353:CDS | 30.0% |
| !!! | AAAATGTTTTGGTTGGCAAA+GGG | - | chr8.1:11389188-11389207 | MS.gene96353:CDS | 30.0% |
| !!! | ACGTCTAAAAATGTTTTGGT+TGG | - | chr8.1:11389181-11389200 | MS.gene96353:CDS | 30.0% |
| AAAACGGTGAGGAAAATACT+TGG | + | chr8.1:11386042-11386061 | None:intergenic | 35.0% | |
| AAAAGCGAACCAATTAAGCA+CGG | + | chr8.1:11386661-11386680 | None:intergenic | 35.0% | |
| AACACAATGGTCTGTATCTT+AGG | + | chr8.1:11387368-11387387 | None:intergenic | 35.0% | |
| AAGATCTATCCAAGGAACTT+GGG | - | chr8.1:11388332-11388351 | MS.gene96353:CDS | 35.0% | |
| AATGGCAATCAACAAATGCT+TGG | - | chr8.1:11385913-11385932 | MS.gene96353:CDS | 35.0% | |
| AATTATGAACCGCCTTTCTT+GGG | - | chr8.1:11387015-11387034 | MS.gene96353:CDS | 35.0% | |
| ACTTGGAGAACATAAAGCAA+AGG | + | chr8.1:11387155-11387174 | None:intergenic | 35.0% | |
| ACTTTCATCCTTTGTAACGT+GGG | + | chr8.1:11385508-11385527 | None:intergenic | 35.0% | |
| ATTTATCTCAGCTATTGCTG+TGG | - | chr8.1:11387826-11387845 | MS.gene96353:intron | 35.0% | |
| CAAAGTGAGCAAACGTATTT+AGG | + | chr8.1:11386601-11386620 | None:intergenic | 35.0% | |
| CTAAATACGTTTGCTCACTT+TGG | - | chr8.1:11386599-11386618 | MS.gene96353:CDS | 35.0% | |
| GCAACTATTTCCAGACAAAA+GGG | - | chr8.1:11386456-11386475 | MS.gene96353:CDS | 35.0% | |
| GCTGAAGAACTTAAACAAGA+TGG | - | chr8.1:11388163-11388182 | MS.gene96353:intron | 35.0% | |
| GTATCATTTATTGTCGCATG+TGG | - | chr8.1:11387589-11387608 | MS.gene96353:CDS | 35.0% | |
| TAATCATTCTGTAGCAGTTG+AGG | - | chr8.1:11388408-11388427 | MS.gene96353:intron | 35.0% | |
| TACTTTCATCCTTTGTAACG+TGG | + | chr8.1:11385509-11385528 | None:intergenic | 35.0% | |
| TAGTTCACCAAATCTTGTCA+TGG | - | chr8.1:11385527-11385546 | MS.gene96353:CDS | 35.0% | |
| TATTGTGTGTAACTGTTGCT+TGG | + | chr8.1:11386565-11386584 | None:intergenic | 35.0% | |
| TCATACAGATAATATGGCAG+TGG | + | chr8.1:11386902-11386921 | None:intergenic | 35.0% | |
| TCTGGTCGAAAACAAATAGA+TGG | + | chr8.1:11385767-11385786 | None:intergenic | 35.0% | |
| TGGAAGTTTGGTCGTAATAA+TGG | - | chr8.1:11388772-11388791 | MS.gene96353:intron | 35.0% | |
| TGTTGCTAAGTGATGCTTAT+GGG | - | chr8.1:11387384-11387403 | MS.gene96353:CDS | 35.0% | |
| TTAAAGTTCCCATCACATTC+TGG | + | chr8.1:11388939-11388958 | None:intergenic | 35.0% | |
| TTGTTATATTCTACAAGCGC+AGG | + | chr8.1:11388016-11388035 | None:intergenic | 35.0% | |
| ! | AAAGTTTTCGAACTTCTGCA+AGG | + | chr8.1:11387190-11387209 | None:intergenic | 35.0% |
| ! | CATTTTATTGTCACCACAGA+TGG | + | chr8.1:11386338-11386357 | None:intergenic | 35.0% |
| ! | GTGCTAAGGCTAGTTATATA+GGG | + | chr8.1:11386708-11386727 | None:intergenic | 35.0% |
| ! | GTTTAAGTTCTTCAGCACTA+TGG | + | chr8.1:11388159-11388178 | None:intergenic | 35.0% |
| ! | TAAAATGGAAAAGCATGCAG+AGG | - | chr8.1:11387757-11387776 | MS.gene96353:intron | 35.0% |
| ! | TACTTGGATTTTGTGAAAGC+GGG | + | chr8.1:11385557-11385576 | None:intergenic | 35.0% |
| ! | TCTTGCACTTTTCATGAGAT+AGG | - | chr8.1:11385714-11385733 | MS.gene96353:intron | 35.0% |
| ! | TGTGCTAAGGCTAGTTATAT+AGG | + | chr8.1:11386709-11386728 | None:intergenic | 35.0% |
| !! | ACAACACAGACACTTGTTTT+AGG | - | chr8.1:11387780-11387799 | MS.gene96353:intron | 35.0% |
| !! | GTCCATCTATTTTTCTGAGA+TGG | + | chr8.1:11388205-11388224 | None:intergenic | 35.0% |
| !! | TTATGTTCTCCAAGTTGATG+TGG | - | chr8.1:11387160-11387179 | MS.gene96353:CDS | 35.0% |
| AAATCCGTCTCAATATGCCT+TGG | + | chr8.1:11386484-11386503 | None:intergenic | 40.0% | |
| ACCTTGTCTATAACCACACT+CGG | + | chr8.1:11386531-11386550 | None:intergenic | 40.0% | |
| ACTCATTAGGAGAACTAGCT+AGG | + | chr8.1:11388531-11388550 | None:intergenic | 40.0% | |
| ACTTAATGCAAGAGTCTGCA+AGG | + | chr8.1:11387972-11387991 | None:intergenic | 40.0% | |
| AGATGTCTTAGCAGAAACAC+CGG | - | chr8.1:11388484-11388503 | MS.gene96353:intron | 40.0% | |
| AGCAAACGTATTTAGGAGGA+AGG | + | chr8.1:11386594-11386613 | None:intergenic | 40.0% | |
| AGCATCACTTAGCAACACAA+TGG | + | chr8.1:11387381-11387400 | None:intergenic | 40.0% | |
| AGGATCTTTCATTCATCTCG+CGG | - | chr8.1:11387800-11387819 | MS.gene96353:intron | 40.0% | |
| AGTGAGCAAACGTATTTAGG+AGG | + | chr8.1:11386598-11386617 | None:intergenic | 40.0% | |
| ATAGCTACTGGGAAGAAAAG+TGG | - | chr8.1:11388125-11388144 | MS.gene96353:intron | 40.0% | |
| ATTGGAAGAGGTGAATCGAT+GGG | + | chr8.1:11388640-11388659 | None:intergenic | 40.0% | |
| CCTTTCAATAAAGCAGATGC+AGG | + | chr8.1:11386939-11386958 | None:intergenic | 40.0% | |
| CTACAGAATGATTATCCTGC+TGG | + | chr8.1:11388402-11388421 | None:intergenic | 40.0% | |
| CTCTCTACACTATTGGAAAC+GGG | - | chr8.1:11386811-11386830 | MS.gene96353:CDS | 40.0% | |
| CTCTTGATTGTTGACGAAGA+TGG | + | chr8.1:11388268-11388287 | None:intergenic | 40.0% | |
| CTGGGAAGCTTAATAATCTC+TGG | + | chr8.1:11387910-11387929 | None:intergenic | 40.0% | |
| CTTTCATCCTTTGTAACGTG+GGG | + | chr8.1:11385507-11385526 | None:intergenic | 40.0% | |
| GAAGATCTATCCAAGGAACT+TGG | - | chr8.1:11388331-11388350 | MS.gene96353:CDS | 40.0% | |
| GAATTATGAACCGCCTTTCT+TGG | - | chr8.1:11387014-11387033 | MS.gene96353:CDS | 40.0% | |
| GCTCTCTACACTATTGGAAA+CGG | - | chr8.1:11386810-11386829 | MS.gene96353:CDS | 40.0% | |
| GGAAATAGTTGCCATGTTCT+GGG | + | chr8.1:11386448-11386467 | None:intergenic | 40.0% | |
| GGCAACTATTTCCAGACAAA+AGG | - | chr8.1:11386455-11386474 | MS.gene96353:CDS | 40.0% | |
| GGTAAGTAACCGTGCTTAAT+TGG | - | chr8.1:11386649-11386668 | MS.gene96353:CDS | 40.0% | |
| GTTGCTAAGTGATGCTTATG+GGG | - | chr8.1:11387385-11387404 | MS.gene96353:CDS | 40.0% | |
| GTTGGCACTAAATAAGCATG+TGG | + | chr8.1:11385863-11385882 | None:intergenic | 40.0% | |
| TACCTGAATATGCTCAAGCA+TGG | + | chr8.1:11388977-11388996 | None:intergenic | 40.0% | |
| TATAGCCATCTCGTTGATCT+CGG | - | chr8.1:11387623-11387642 | MS.gene96353:intron | 40.0% | |
| TATCAAACTATGTTTCCGGG+AGG | - | chr8.1:11385825-11385844 | MS.gene96353:CDS | 40.0% | |
| TCACGTTTATACCCAGAACA+TGG | - | chr8.1:11386434-11386453 | MS.gene96353:CDS | 40.0% | |
| TCATGAAACATTATGCCAGC+AGG | - | chr8.1:11388384-11388403 | MS.gene96353:intron | 40.0% | |
| TCTCACAGGAAAGTAGTGTT+GGG | - | chr8.1:11388569-11388588 | MS.gene96353:intron | 40.0% | |
| TCTCATGCTCTCTACACTAT+TGG | - | chr8.1:11386804-11386823 | MS.gene96353:CDS | 40.0% | |
| TCTCTTATTCTCCTGTTGCT+GGG | - | chr8.1:11387522-11387541 | MS.gene96353:CDS | 40.0% | |
| TCTTCCCAGTAGCTATTATC+AGG | + | chr8.1:11388121-11388140 | None:intergenic | 40.0% | |
| TCTTCGTCAACAATCAAGAG+TGG | - | chr8.1:11388268-11388287 | MS.gene96353:CDS | 40.0% | |
| TGAACCTGATTCACATGCAA+TGG | + | chr8.1:11388074-11388093 | None:intergenic | 40.0% | |
| TGGAAATAGTTGCCATGTTC+TGG | + | chr8.1:11386449-11386468 | None:intergenic | 40.0% | |
| TGGTATCACTAAATTCCTCC+CGG | + | chr8.1:11385843-11385862 | None:intergenic | 40.0% | |
| TTACACCCCATTATGTCATC+TGG | - | chr8.1:11385592-11385611 | MS.gene96353:CDS | 40.0% | |
| TTCTCTTATTCTCCTGTTGC+TGG | - | chr8.1:11387521-11387540 | MS.gene96353:CDS | 40.0% | |
| ! | CCTGCATCTGCTTTATTGAA+AGG | - | chr8.1:11386936-11386955 | MS.gene96353:CDS | 40.0% |
| ! | GCTTAATAATCTCTGGAGAC+AGG | + | chr8.1:11387903-11387922 | None:intergenic | 40.0% |
| ! | GTGTTGCTAAGTGATGCTTA+TGG | - | chr8.1:11387383-11387402 | MS.gene96353:CDS | 40.0% |
| !! | CTTCTCTGAAACGTAAGTTC+AGG | + | chr8.1:11389073-11389092 | None:intergenic | 40.0% |
| !! | GAAAAGAGTACTTGCTTCTG+AGG | - | chr8.1:11388810-11388829 | MS.gene96353:intron | 40.0% |
| !! | TTCCAATGGCTTTGGAAGTT+TGG | - | chr8.1:11388760-11388779 | MS.gene96353:intron | 40.0% |
| !!! | CGCTGGTTGAGAGTTTTATT+TGG | - | chr8.1:11387671-11387690 | MS.gene96353:intron | 40.0% |
| !!! | CTTTTTTCACAATGCAGAGC+TGG | - | chr8.1:11386388-11386407 | MS.gene96353:CDS | 40.0% |
| AACCTTCTTGTGAGTGCAGT+TGG | + | chr8.1:11385881-11385900 | None:intergenic | 45.0% | |
| AAGATCACCAGCTGTAGAAG+AGG | + | chr8.1:11388881-11388900 | None:intergenic | 45.0% | |
| ACCACCATTGCATGTGAATC+AGG | - | chr8.1:11388067-11388086 | MS.gene96353:intron | 45.0% | |
| ACCTGATTCACATGCAATGG+TGG | + | chr8.1:11388071-11388090 | None:intergenic | 45.0% | |
| AGTGATGCTTATGGGGTTGA+AGG | - | chr8.1:11387392-11387411 | MS.gene96353:CDS | 45.0% | |
| ATAGCCATCTCGTTGATCTC+GGG | - | chr8.1:11387624-11387643 | MS.gene96353:intron | 45.0% | |
| ATCTAACCCTCTCTTTCCGT+TGG | - | chr8.1:11386310-11386329 | MS.gene96353:CDS | 45.0% | |
| CCTTGTCTATAACCACACTC+GGG | + | chr8.1:11386530-11386549 | None:intergenic | 45.0% | |
| CGGTTACTTACCGAGTTAGA+AGG | + | chr8.1:11386641-11386660 | None:intergenic | 45.0% | |
| CTCTCAGGATGATCAGAGAT+TGG | + | chr8.1:11388658-11388677 | None:intergenic | 45.0% | |
| GAAATTCGGCCACACTTTCT+AGG | - | chr8.1:11388719-11388738 | MS.gene96353:intron | 45.0% | |
| GACCAAACTTCCAAAGCCAT+TGG | + | chr8.1:11388765-11388784 | None:intergenic | 45.0% | |
| GATTGGAAGAGGTGAATCGA+TGG | + | chr8.1:11388641-11388660 | None:intergenic | 45.0% | |
| GCAGAAGCTTCAATTACAGG+TGG | + | chr8.1:11387563-11387582 | None:intergenic | 45.0% | |
| GCAGCAGAAGCTTCAATTAC+AGG | + | chr8.1:11387566-11387585 | None:intergenic | 45.0% | |
| GCTTTAATGAATGGGGCTCA+CGG | - | chr8.1:11387476-11387495 | MS.gene96353:CDS | 45.0% | |
| GGACTGTGTGTTTGTGTAAC+AGG | - | chr8.1:11389102-11389121 | MS.gene96353:intron | 45.0% | |
| GGATGATCAGAGATTGGAAG+AGG | + | chr8.1:11388652-11388671 | None:intergenic | 45.0% | |
| GGGTTGTCCATGACAAGATT+TGG | + | chr8.1:11385537-11385556 | None:intergenic | 45.0% | |
| GTCCATGCTTGAGCATATTC+AGG | - | chr8.1:11388972-11388991 | MS.gene96353:intron | 45.0% | |
| GTCTCACAGGAAAGTAGTGT+TGG | - | chr8.1:11388568-11388587 | MS.gene96353:intron | 45.0% | |
| TACAGGTGGCAAACCAGTAT+GGG | + | chr8.1:11387549-11387568 | None:intergenic | 45.0% | |
| TATGGGGTTGAAGGTGAACT+GGG | - | chr8.1:11387401-11387420 | MS.gene96353:CDS | 45.0% | |
| TCTGCTGACCAGAATGTGAT+GGG | - | chr8.1:11388928-11388947 | MS.gene96353:intron | 45.0% | |
| TCTGCTTTCCAACAAGAGTG+TGG | - | chr8.1:11389133-11389152 | MS.gene96353:intron | 45.0% | |
| TGACAACCTCTTGATCGTCT+GGG | - | chr8.1:11387709-11387728 | MS.gene96353:intron | 45.0% | |
| TTACAGGTGGCAAACCAGTA+TGG | + | chr8.1:11387550-11387569 | None:intergenic | 45.0% | |
| TTAGGCGTGCTAATGTGCTA+AGG | + | chr8.1:11386722-11386741 | None:intergenic | 45.0% | |
| TTATGGGGTTGAAGGTGAAC+TGG | - | chr8.1:11387400-11387419 | MS.gene96353:CDS | 45.0% | |
| TTCTGCTGACCAGAATGTGA+TGG | - | chr8.1:11388927-11388946 | MS.gene96353:intron | 45.0% | |
| TTCTTCTGACCCAAGTTCCT+TGG | + | chr8.1:11388344-11388363 | None:intergenic | 45.0% | |
| TTGACAACCTCTTGATCGTC+TGG | - | chr8.1:11387708-11387727 | MS.gene96353:intron | 45.0% | |
| TTTCATCCCAGACGATCAAG+AGG | + | chr8.1:11387718-11387737 | None:intergenic | 45.0% | |
| ! | GAAATCGGTTCTCACGGAAA+AGG | - | chr8.1:11387311-11387330 | MS.gene96353:CDS | 45.0% |
| ! | GACTTGACGGATGACGAAAT+CGG | - | chr8.1:11387296-11387315 | MS.gene96353:CDS | 45.0% |
| ! | GATGACGAAATCGGTTCTCA+CGG | - | chr8.1:11387305-11387324 | MS.gene96353:CDS | 45.0% |
| ! | GTGTAACTGTTGCTTGGCTT+AGG | + | chr8.1:11386559-11386578 | None:intergenic | 45.0% |
| ! | TACGTTTGCTCACTTTGGGA+TGG | - | chr8.1:11386604-11386623 | MS.gene96353:CDS | 45.0% |
| ! | TTCCAACAAGAGTGTGGTCA+GGG | - | chr8.1:11389139-11389158 | MS.gene96353:intron | 45.0% |
| ! | TTTCCAACAAGAGTGTGGTC+AGG | - | chr8.1:11389138-11389157 | MS.gene96353:intron | 45.0% |
| AAGCTCCTTGAGAGCTGACA+TGG | + | chr8.1:11389224-11389243 | None:intergenic | 50.0% | |
| AAGGAGATGGAAGACTCGTG+TGG | + | chr8.1:11386180-11386199 | None:intergenic | 50.0% | |
| AAGTGTGGCCGAATTTCCTG+TGG | + | chr8.1:11388716-11388735 | None:intergenic | 50.0% | |
| ACAGCTTCCTCTTCTACAGC+TGG | - | chr8.1:11388871-11388890 | MS.gene96353:intron | 50.0% | |
| ATCTGGAAGCCCAAGAAAGG+CGG | + | chr8.1:11387027-11387046 | None:intergenic | 50.0% | |
| ATGGAGCCAACGGAAAGAGA+GGG | + | chr8.1:11386319-11386338 | None:intergenic | 50.0% | |
| CACAGTACTTTGCTCTACGC+TGG | - | chr8.1:11387654-11387673 | MS.gene96353:intron | 50.0% | |
| CCCGAGTGTGGTTATAGACA+AGG | - | chr8.1:11386527-11386546 | MS.gene96353:CDS | 50.0% | |
| GAGGCAGAGCAACAAGATGA+TGG | - | chr8.1:11388427-11388446 | MS.gene96353:intron | 50.0% | |
| GCAGTATAACGGCCAAATGC+TGG | + | chr8.1:11385630-11385649 | None:intergenic | 50.0% | |
| GGAATCTGGAAGCCCAAGAA+AGG | + | chr8.1:11387030-11387049 | None:intergenic | 50.0% | |
| GGGCGCAATAATGATTCCAC+AGG | - | chr8.1:11388697-11388716 | MS.gene96353:intron | 50.0% | |
| GGTGCCAAGGCATATTGAGA+CGG | - | chr8.1:11386477-11386496 | MS.gene96353:CDS | 50.0% | |
| GGTTGATCCCCACGTTACAA+AGG | - | chr8.1:11385497-11385516 | MS.gene96353:CDS | 50.0% | |
| GTGTGGTCAGGGAACTTCAT+TGG | - | chr8.1:11389150-11389169 | MS.gene96353:intron | 50.0% | |
| TACTGCCATGTCAGCTCTCA+AGG | - | chr8.1:11389216-11389235 | MS.gene96353:CDS | 50.0% | |
| TAGCCATCTCGTTGATCTCG+GGG | - | chr8.1:11387625-11387644 | MS.gene96353:intron | 50.0% | |
| TCCTGAGAGCAACCTATCTC+CGG | - | chr8.1:11388669-11388688 | MS.gene96353:intron | 50.0% | |
| TGCCAACTGCACTCACAAGA+AGG | - | chr8.1:11385876-11385895 | MS.gene96353:CDS | 50.0% | |
| TGTCTTAGACATCCCGAGTG+TGG | - | chr8.1:11386515-11386534 | MS.gene96353:CDS | 50.0% | |
| TTCACAATGCAGAGCTGGAG+AGG | - | chr8.1:11386393-11386412 | MS.gene96353:CDS | 50.0% | |
| TTCCCTGACCACACTCTTGT+TGG | + | chr8.1:11389144-11389163 | None:intergenic | 50.0% | |
| TTGTAACGTGGGGATCAACC+AGG | + | chr8.1:11385497-11385516 | None:intergenic | 50.0% | |
| ! | AATCTCTGGAGACAGGTCGT+AGG | + | chr8.1:11387896-11387915 | None:intergenic | 50.0% |
| ! | GAATGAGTTTTCCTCGCTGC+CGG | + | chr8.1:11388506-11388525 | None:intergenic | 50.0% |
| !! | CAGCGTAGAGCAAAGTACTG+TGG | + | chr8.1:11387656-11387675 | None:intergenic | 50.0% |
| !! | TTCCAGACAAAAGGGTGCCA+AGG | - | chr8.1:11386464-11386483 | MS.gene96353:CDS | 50.0% |
| !!! | TGTTTTGGTTGGCAAAGGGC+AGG | - | chr8.1:11389192-11389211 | MS.gene96353:CDS | 50.0% |
| ACCGGAGATAGGTTGCTCTC+AGG | + | chr8.1:11388673-11388692 | None:intergenic | 55.0% | |
| CAACCCCGAGATCAACGAGA+TGG | + | chr8.1:11387631-11387650 | None:intergenic | 55.0% | |
| CAATGCAGAGCTGGAGAGGA+TGG | - | chr8.1:11386397-11386416 | MS.gene96353:CDS | 55.0% | |
| GATGGAGCCAACGGAAAGAG+AGG | + | chr8.1:11386320-11386339 | None:intergenic | 55.0% | |
| GGCTCACGGTTCAGTTGCAA+TGG | - | chr8.1:11387490-11387509 | MS.gene96353:CDS | 55.0% | |
| GTCACCACAGATGGAGCCAA+CGG | + | chr8.1:11386329-11386348 | None:intergenic | 55.0% | |
| TCATTATTGCGCCCTGCCAC+CGG | + | chr8.1:11388691-11388710 | None:intergenic | 55.0% | |
| TGAGAGCAACCTATCTCCGG+TGG | - | chr8.1:11388672-11388691 | MS.gene96353:intron | 55.0% | |
| ! | CAAGGCGCTCCACATCAACT+TGG | + | chr8.1:11387172-11387191 | None:intergenic | 55.0% |
| ! | TGCCTTGGCACCCTTTTGTC+TGG | + | chr8.1:11386469-11386488 | None:intergenic | 55.0% |
| ! | TTCTACAAGCGCAGGTGTCG+AGG | + | chr8.1:11388008-11388027 | None:intergenic | 55.0% |
| !! | CTTTCCGTTGGCTCCATCTG+TGG | - | chr8.1:11386322-11386341 | MS.gene96353:CDS | 55.0% |
| AGCAACCTATCTCCGGTGGC+AGG | - | chr8.1:11388676-11388695 | MS.gene96353:intron | 60.0% | |
| CCAGTATGGGACCCAGCAAC+AGG | + | chr8.1:11387536-11387555 | None:intergenic | 60.0% | |
| CCTGTTGCTGGGTCCCATAC+TGG | - | chr8.1:11387533-11387552 | MS.gene96353:CDS | 60.0% | |
| GCAACCTATCTCCGGTGGCA+GGG | - | chr8.1:11388677-11388696 | MS.gene96353:intron | 60.0% | |
| TAGCAGAAACACCGGCAGCG+AGG | - | chr8.1:11388492-11388511 | MS.gene96353:intron | 60.0% | |
| TAGTTTGAGAGGGCGGCTCC+TGG | - | chr8.1:11385476-11385495 | MS.gene96353:CDS | 60.0% | |
| TGCAGAGCTGGAGAGGATGG+TGG | - | chr8.1:11386400-11386419 | MS.gene96353:CDS | 60.0% | |
| !! | GCTGGAGAGGATGGTGGATC+AGG | - | chr8.1:11386406-11386425 | MS.gene96353:CDS | 60.0% |
| TGCGCCCTGCCACCGGAGAT+AGG | + | chr8.1:11388684-11388703 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 11385470 | 11389276 | 11385470 | ID=MS.gene96353 |
| chr8.1 | mRNA | 11385470 | 11389276 | 11385470 | ID=MS.gene96353.t1;Parent=MS.gene96353 |
| chr8.1 | exon | 11389173 | 11389276 | 11389173 | ID=MS.gene96353.t1.exon1;Parent=MS.gene96353.t1 |
| chr8.1 | CDS | 11389173 | 11389276 | 11389173 | ID=cds.MS.gene96353.t1;Parent=MS.gene96353.t1 |
| chr8.1 | exon | 11388198 | 11388374 | 11388198 | ID=MS.gene96353.t1.exon2;Parent=MS.gene96353.t1 |
| chr8.1 | CDS | 11388198 | 11388374 | 11388198 | ID=cds.MS.gene96353.t1;Parent=MS.gene96353.t1 |
| chr8.1 | exon | 11385753 | 11387614 | 11385753 | ID=MS.gene96353.t1.exon3;Parent=MS.gene96353.t1 |
| chr8.1 | CDS | 11385753 | 11387614 | 11385753 | ID=cds.MS.gene96353.t1;Parent=MS.gene96353.t1 |
| chr8.1 | exon | 11385470 | 11385622 | 11385470 | ID=MS.gene96353.t1.exon4;Parent=MS.gene96353.t1 |
| chr8.1 | CDS | 11385470 | 11385622 | 11385470 | ID=cds.MS.gene96353.t1;Parent=MS.gene96353.t1 |
| Gene Sequence |
| Protein sequence |
