AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027441.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027441.01.T01 MTR_5g058140 96.698 212 7 0 1 212 1 212 1.49e-152 422
MsG0580027441.01.T01 MTR_3g072600 73.832 214 48 4 5 212 6 217 8.15e-110 314
MsG0580027441.01.T01 MTR_2g007210 67.822 202 63 2 13 212 5 206 1.40e-97 282
MsG0580027441.01.T01 MTR_8g088940 67.157 204 62 3 14 212 8 211 2.91e-88 259
MsG0580027441.01.T01 MTR_8g088980 72.222 144 39 1 70 212 19 162 1.05e-74 223
MsG0580027441.01.T01 MTR_4g082315 44.560 193 101 2 26 212 24 216 3.66e-60 188
MsG0580027441.01.T01 MTR_6g012770 41.209 182 100 3 38 212 31 212 6.21e-51 164
MsG0580027441.01.T01 MTR_7g011490 33.971 209 132 2 10 212 4 212 1.47e-46 153
MsG0580027441.01.T01 MTR_5g042260 34.742 213 129 5 8 212 9 219 3.74e-42 142
MsG0580027441.01.T01 MTR_5g042270 34.286 175 114 1 39 212 11 185 8.39e-38 130
MsG0580027441.01.T01 MTR_5g042320 34.597 211 128 5 12 212 13 223 1.43e-32 117
MsG0580027441.01.T01 MTR_5g042320 34.132 167 100 5 12 168 13 179 1.89e-21 88.2
MsG0580027441.01.T01 MTR_5g042300 30.328 122 71 2 91 212 41 148 7.31e-14 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027441.01.T01 AT1G09580 61.538 208 77 2 8 212 10 217 9.13e-94 273
MsG0580027441.01.T01 AT1G21900 63.285 207 69 4 11 212 12 216 7.89e-91 266
MsG0580027441.01.T01 AT1G57620 60.488 205 75 3 11 212 11 212 4.36e-89 261
MsG0580027441.01.T01 AT3G10780 52.174 207 92 2 13 212 11 217 3.15e-66 203
MsG0580027441.01.T01 AT1G26690 39.906 213 117 2 11 212 2 214 7.93e-56 177
MsG0580027441.01.T01 AT1G14010 39.512 205 118 2 14 212 8 212 9.72e-54 171
MsG0580027441.01.T01 AT1G69460 39.234 209 117 3 10 212 10 214 5.44e-52 167
MsG0580027441.01.T01 AT2G03290 38.462 195 113 1 25 212 19 213 1.11e-48 158
MsG0580027441.01.T01 AT3G29070 37.629 194 115 2 25 212 32 225 1.11e-46 154
MsG0580027441.01.T01 AT2G03040 35.811 148 88 1 25 165 19 166 2.82e-30 110
MsG0580027441.01.T01 AT3G22845 25.234 214 147 5 1 208 1 207 5.28e-12 63.2

Find 53 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAACAGGGTTTGGGTTTCT+TGG 0.263317 5:+60942584 None:intergenic
ACAGAATGCTTACTAACTTT+TGG 0.279932 5:-60937739 MsG0580027441.01.T01:three_prime_UTR
CAACAGGGTTTGGGTTTCTT+GGG 0.291053 5:+60942585 None:intergenic
GAAATTATGTGGCATGCTTT+TGG 0.304500 5:-60938992 MsG0580027441.01.T01:CDS
TCGATGTGAGTGGCTCTTCT+TGG 0.318352 5:+60937774 None:intergenic
GTCAGCCTTGATTGGAAAAC+TGG 0.328485 5:-60938936 MsG0580027441.01.T01:CDS
AACAGTGTCTTATTATTCTA+AGG 0.339472 5:-60942487 MsG0580027441.01.T01:five_prime_UTR
TTGCAGGTAACATCTCCTTT+TGG 0.356646 5:-60939080 MsG0580027441.01.T01:intron
CTGACACTTACACTACCTTC+TGG 0.357413 5:+60938954 None:intergenic
CGATTATCTAATTTATTTGA+AGG 0.366207 5:-60938706 MsG0580027441.01.T01:CDS
TGGTTGACTCTTCCAAGTTC+AGG 0.366318 5:-60942370 MsG0580027441.01.T01:CDS
AAGAGCCACTCACATCGATT+AGG 0.379215 5:-60937769 MsG0580027441.01.T01:three_prime_UTR
TAGTTTCTGGATTGCAACTT+TGG 0.395311 5:-60937943 MsG0580027441.01.T01:CDS
TGGAATTTCAGCAAAGGATT+GGG 0.395382 5:-60938916 MsG0580027441.01.T01:CDS
CTGGAATTTCAGCAAAGGAT+TGG 0.405549 5:-60938917 MsG0580027441.01.T01:CDS
AGGGTGTTGAACTTGAAATC+AGG 0.420862 5:-60938758 MsG0580027441.01.T01:CDS
AGAGCCACTCACATCGATTA+GGG 0.442421 5:-60937768 MsG0580027441.01.T01:three_prime_UTR
ACACATTTAGTTCCTGAACT+TGG 0.448372 5:+60942358 None:intergenic
AATGAGAGCACCAAAATGAT+AGG 0.448690 5:+60937493 None:intergenic
AATAATAAAACATACCTTTG+CGG 0.453832 5:+60942258 None:intergenic
TGATGAACGTTGTTTCCAAA+AGG 0.464734 5:+60939065 None:intergenic
CAGGGTTTGGGTTTCTTGGG+AGG 0.464810 5:+60942588 None:intergenic
TTTGGGTTTCTTGGGAGGGT+CGG 0.470637 5:+60942593 None:intergenic
AAGTTAGTAAGCATTCTGTT+AGG 0.476120 5:+60937743 None:intergenic
GTGTAAGTGTCAGCCTTGAT+TGG 0.480040 5:-60938944 MsG0580027441.01.T01:CDS
TATAGAGCAGCTATGACAAC+TGG 0.487758 5:-60937603 MsG0580027441.01.T01:three_prime_UTR
GAGAATCTAGTTGAGGCAAA+AGG 0.493384 5:-60937828 MsG0580027441.01.T01:three_prime_UTR
TGGTTTAGTATCATGTCCCT+TGG 0.503070 5:-60937977 MsG0580027441.01.T01:CDS
TACTATGTTGTAACTGATGA+AGG 0.503160 5:-60942295 MsG0580027441.01.T01:CDS
TGACACTTACACTACCTTCT+GGG 0.510439 5:+60938955 None:intergenic
TGCCACATAATTTCCACTCT+CGG 0.522318 5:+60939001 None:intergenic
AAACAAATGCTAGAGTCGCT+TGG 0.527730 5:-60937997 MsG0580027441.01.T01:CDS
AGGGTTTGGGTTTCTTGGGA+GGG 0.529555 5:+60942589 None:intergenic
AGTTGAGGCAAAAGGAAACT+TGG 0.530434 5:-60937820 MsG0580027441.01.T01:three_prime_UTR
AAACTAAAACGCAGAGACCA+AGG 0.543213 5:+60937960 None:intergenic
GAAAACTGGAATTTCAGCAA+AGG 0.546642 5:-60938922 MsG0580027441.01.T01:CDS
CAAGCTATGAAGTTAAGAGA+TGG 0.548808 5:-60942463 MsG0580027441.01.T01:exon
GCATTTACAACTACCGAGAG+TGG 0.562957 5:-60939014 MsG0580027441.01.T01:CDS
TCAAATAAATTAGATAATCG+TGG 0.574741 5:+60938709 None:intergenic
ATAAATTAGATAATCGTGGA+TGG 0.583572 5:+60938713 None:intergenic
TACCGAGAGTGGAAATTATG+TGG 0.589093 5:-60939003 MsG0580027441.01.T01:CDS
AACTAAAACGCAGAGACCAA+GGG 0.592971 5:+60937961 None:intergenic
TCTTCACACTATTTCCGCAA+AGG 0.600461 5:-60942272 MsG0580027441.01.T01:intron
AGGAACTAAATGTGTGTCTG+AGG 0.602454 5:-60942350 MsG0580027441.01.T01:CDS
AAAATCTTATAGTATTCAAG+TGG 0.605113 5:+60937555 None:intergenic
CTTGAAATCAGGAAGCTCGA+AGG 0.630601 5:-60938747 MsG0580027441.01.T01:CDS
CATAATGAAAACGTTACACA+AGG 0.640271 5:-60939044 MsG0580027441.01.T01:CDS
TGCAAAGAAAGAAAAGATTG+AGG 0.640940 5:-60938886 MsG0580027441.01.T01:intron
GCTACAGGGAAGCAACAATG+AGG 0.645196 5:-60938033 MsG0580027441.01.T01:intron
CTACAGGGAAGCAACAATGA+GGG 0.659995 5:-60938032 MsG0580027441.01.T01:intron
ATGGAAGGAAAACACCCAGA+AGG 0.668528 5:-60938969 MsG0580027441.01.T01:CDS
GGCGCCCTAATCGATGTGAG+TGG 0.671982 5:+60937764 None:intergenic
AAAAGAGTGAAATTCAAGAG+GGG 0.711512 5:+60937663 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATTAAATTGATAATTTAA+TGG - Chr5:60940931-60940950 MsG0580027441.01.T01:intron 10.0%
!!! TATTTAATTTATATTTTTGC+AGG - Chr5:60940976-60940995 MsG0580027441.01.T01:intron 10.0%
!!! TTAGAATATATATTTTCAAT+AGG - Chr5:60938340-60938359 MsG0580027441.01.T01:intron 10.0%
!!! TTTAAAATCACATATATAAT+TGG - Chr5:60940857-60940876 MsG0580027441.01.T01:intron 10.0%
!! AATTATTGTTAGAATTAGAT+CGG - Chr5:60938072-60938091 MsG0580027441.01.T01:intron 15.0%
!! ATAGTAAATTGTTATGTTAT+TGG - Chr5:60939867-60939886 MsG0580027441.01.T01:intron 15.0%
!! ATATAAGCAAAACATTAATA+TGG + Chr5:60941274-60941293 None:intergenic 15.0%
!! TTCAAAATGCAAAATATATA+GGG - Chr5:60938426-60938445 MsG0580027441.01.T01:intron 15.0%
!! TTGAAACTTAAATAACTTAA+GGG + Chr5:60938683-60938702 None:intergenic 15.0%
!!! AAGTTATTTAAGTTTCAAAT+TGG - Chr5:60938685-60938704 MsG0580027441.01.T01:intron 15.0%
!!! AATTTGATTTTGAAGAAAAA+TGG - Chr5:60939442-60939461 MsG0580027441.01.T01:intron 15.0%
!!! ATGTACATTCTTTAATTTAA+AGG - Chr5:60940215-60940234 MsG0580027441.01.T01:intron 15.0%
!!! TACTTTAAAATAGTATTGTT+TGG - Chr5:60939326-60939345 MsG0580027441.01.T01:intron 15.0%
!!! TAGTTTTATACATATAATCT+TGG + Chr5:60941705-60941724 None:intergenic 15.0%
!!! TGATAGTTTTTAATTTTCAA+TGG - Chr5:60939923-60939942 MsG0580027441.01.T01:intron 15.0%
!!! TTTAAGTTTTATGTTTGTAT+CGG + Chr5:60939772-60939791 None:intergenic 15.0%
!!! TTTGAAACTTAAATAACTTA+AGG + Chr5:60938684-60938703 None:intergenic 15.0%
!!! TTTGTTTGTTGAAATTATAT+GGG - Chr5:60940008-60940027 MsG0580027441.01.T01:intron 15.0%
!!! TTTTGTTTGTTGAAATTATA+TGG - Chr5:60940007-60940026 MsG0580027441.01.T01:intron 15.0%
!!! TTTTTTTTCATACTTAATTC+TGG - Chr5:60939537-60939556 MsG0580027441.01.T01:intron 15.0%
!! AAAAATGCTTTCATGTAAAA+TGG + Chr5:60939384-60939403 None:intergenic 20.0%
!! AAAATCTTATAGTATTCAAG+TGG + Chr5:60942520-60942539 None:intergenic 20.0%
!! AAATCACATATATAATTGGT+AGG - Chr5:60940861-60940880 MsG0580027441.01.T01:intron 20.0%
!! AACATGGTAACATAAAAAAA+AGG - Chr5:60938608-60938627 MsG0580027441.01.T01:intron 20.0%
!! AACGTTATATACTAAGAAAA+GGG + Chr5:60938147-60938166 None:intergenic 20.0%
!! AATAATAAAACATACCTTTG+CGG + Chr5:60937817-60937836 None:intergenic 20.0%
!! ATAAAAAAGTTTACCAACAA+TGG - Chr5:60938206-60938225 MsG0580027441.01.T01:intron 20.0%
!! ATTGTTATGTTATTGGAATT+TGG - Chr5:60939874-60939893 MsG0580027441.01.T01:intron 20.0%
!! CGATTATCTAATTTATTTGA+AGG - Chr5:60941366-60941385 MsG0580027441.01.T01:intron 20.0%
!! GATACAAACATAAAACTTAA+AGG - Chr5:60939771-60939790 MsG0580027441.01.T01:intron 20.0%
!! GATGTCTGTAATAATAATAA+TGG + Chr5:60938972-60938991 None:intergenic 20.0%
!! GATTAATTATTGTTAAACGA+CGG - Chr5:60938567-60938586 MsG0580027441.01.T01:intron 20.0%
!! GTTCAAAATGCAAAATATAT+AGG - Chr5:60938425-60938444 MsG0580027441.01.T01:intron 20.0%
!! TAAATGCTTTATGTTAATCT+TGG - Chr5:60940104-60940123 MsG0580027441.01.T01:intron 20.0%
!! TCAAATAAATTAGATAATCG+TGG + Chr5:60941366-60941385 None:intergenic 20.0%
!! TTAAAGAATGTACATAAACT+TGG + Chr5:60940210-60940229 None:intergenic 20.0%
!! TTCAATAGGTGAATTAAAAT+TGG - Chr5:60938354-60938373 MsG0580027441.01.T01:intron 20.0%
!!! AAAGTTAACATTTTATCATC+TGG + Chr5:60939070-60939089 None:intergenic 20.0%
!!! AACTTTTGATTGTTTGTTTA+AGG + Chr5:60939814-60939833 None:intergenic 20.0%
!!! ACATAAAGCATTTAAAATTG+TGG + Chr5:60940098-60940117 None:intergenic 20.0%
!!! ACATTTTTGTTGATTAGATT+TGG + Chr5:60939000-60939019 None:intergenic 20.0%
!!! TAAAATTGTGGTTCTAAATT+CGG + Chr5:60940086-60940105 None:intergenic 20.0%
!!! TAAATATTTACTCTTTTGTC+CGG + Chr5:60938007-60938026 None:intergenic 20.0%
!!! TAATGTTTTTATTTGCAACA+GGG + Chr5:60937505-60937524 None:intergenic 20.0%
!!! TGTAAAAAGTATTACATAGT+CGG + Chr5:60940897-60940916 None:intergenic 20.0%
!!! TTTAAAGTAGTAAACCATTT+AGG + Chr5:60939315-60939334 None:intergenic 20.0%
!!! TTTTCATTCTTCTTTAAATC+TGG + Chr5:60938893-60938912 None:intergenic 20.0%
!!! TTTTTATGTTACCATGTTAT+AGG + Chr5:60938606-60938625 None:intergenic 20.0%
! AAAAAGAGTGAAATTCAAGA+GGG + Chr5:60942413-60942432 None:intergenic 25.0%
! AATACAAAATTCCCCTAATT+TGG + Chr5:60941549-60941568 None:intergenic 25.0%
! ACTTTGTATAGATCTTCAAT+AGG + Chr5:60938118-60938137 None:intergenic 25.0%
! AGTACAAACGTAAAACTTAA+AGG + Chr5:60938652-60938671 None:intergenic 25.0%
! ATAAATTAGATAATCGTGGA+TGG + Chr5:60941362-60941381 None:intergenic 25.0%
! ATACAAAATTCCCCTAATTT+GGG + Chr5:60941548-60941567 None:intergenic 25.0%
! ATCTAAACTAAGCAATGATT+AGG + Chr5:60937847-60937866 None:intergenic 25.0%
! ATTTCAGTTTGATTAGATCA+GGG - Chr5:60941424-60941443 MsG0580027441.01.T01:intron 25.0%
! CAAACTGAAATCAAACTTAA+GGG + Chr5:60941632-60941651 None:intergenic 25.0%
! CAACGTTATATACTAAGAAA+AGG + Chr5:60938148-60938167 None:intergenic 25.0%
! CTTAAATTATACTTGATGTC+TGG + Chr5:60940760-60940779 None:intergenic 25.0%
! GGAAAAAAATATGGTTTGAA+TGG - Chr5:60942363-60942382 MsG0580027441.01.T01:CDS 25.0%
! GGCAATATAGGAAAAAAATA+TGG - Chr5:60942354-60942373 MsG0580027441.01.T01:CDS 25.0%
! GGTGTATCATTAATTTCATA+CGG - Chr5:60941445-60941464 MsG0580027441.01.T01:intron 25.0%
! GTATATAACGTTGTTAAAAC+AGG - Chr5:60938155-60938174 MsG0580027441.01.T01:intron 25.0%
! TAGGTGAATTAAAATTGGTT+TGG - Chr5:60938359-60938378 MsG0580027441.01.T01:intron 25.0%
! TATTTCACTAAATCGATAGT+TGG - Chr5:60941840-60941859 MsG0580027441.01.T01:intron 25.0%
! TCTAAACTAAGCAATGATTA+GGG + Chr5:60937846-60937865 None:intergenic 25.0%
! TCTGTTAAAAACTGATTATG+TGG - Chr5:60938754-60938773 MsG0580027441.01.T01:CDS 25.0%
! TGAAGATCTATACAAAGTTA+GGG - Chr5:60938120-60938139 MsG0580027441.01.T01:intron 25.0%
! TTGAAGATCTATACAAAGTT+AGG - Chr5:60938119-60938138 MsG0580027441.01.T01:intron 25.0%
!! AAATATTTACTCTTTTGTCC+GGG + Chr5:60938006-60938025 None:intergenic 25.0%
!! AACAGTGTCTTATTATTCTA+AGG - Chr5:60937585-60937604 MsG0580027441.01.T01:three_prime_UTR 25.0%
!! AGGTGAATTAAAATTGGTTT+GGG - Chr5:60938360-60938379 MsG0580027441.01.T01:intron 25.0%
!! ATAATAATGGAAATGCTAAC+CGG + Chr5:60938959-60938978 None:intergenic 25.0%
!! CTTTTCTATTCCTATCATTT+TGG - Chr5:60942569-60942588 MsG0580027441.01.T01:five_prime_UTR 25.0%
!! GATAGAGAAAATAAGCATTT+TGG + Chr5:60940302-60940321 None:intergenic 25.0%
!! TTACTAACTTTTGGCAATAT+AGG - Chr5:60942342-60942361 MsG0580027441.01.T01:CDS 25.0%
!! TTCTAAAAACAGAAGCTATT+TGG - Chr5:60937682-60937701 MsG0580027441.01.T01:three_prime_UTR 25.0%
!! TTTCAAACATTGATTGAAGT+TGG - Chr5:60939832-60939851 MsG0580027441.01.T01:intron 25.0%
!! TTTCTATTTTGTGAGTTTGA+CGG - Chr5:60940244-60940263 MsG0580027441.01.T01:intron 25.0%
!!! AATCATTTTTTGTTTCCTAG+AGG + Chr5:60941944-60941963 None:intergenic 25.0%
!!! AATGCTTATTTTCTCTATCT+AGG - Chr5:60940303-60940322 MsG0580027441.01.T01:intron 25.0%
!!! ATGAAAGCATTTTTCTGAAT+TGG - Chr5:60939390-60939409 MsG0580027441.01.T01:intron 25.0%
!!! ATGCTTATTTTCTCTATCTA+GGG - Chr5:60940304-60940323 MsG0580027441.01.T01:intron 25.0%
!!! CAGAATCACTTATTTTGATT+CGG - Chr5:60939202-60939221 MsG0580027441.01.T01:intron 25.0%
!!! CTTATATGATTTGTTTGCTT+TGG - Chr5:60941287-60941306 MsG0580027441.01.T01:intron 25.0%
!!! GTAATGTTTTTATTTGCAAC+AGG + Chr5:60937506-60937525 None:intergenic 25.0%
!!! TCACTTATAACTTTTGAGTT+TGG - Chr5:60940565-60940584 MsG0580027441.01.T01:intron 25.0%
!!! TTGATTTGAGTTGAGTTTTT+GGG + Chr5:60939036-60939055 None:intergenic 25.0%
!!! TTTGATTTGAGTTGAGTTTT+TGG + Chr5:60939037-60939056 None:intergenic 25.0%
!!! TTTTAAGTTCTCCCAAATTA+GGG - Chr5:60941534-60941553 MsG0580027441.01.T01:intron 25.0%
!!! TTTTGGTTCAGAAAAATCTA+TGG + Chr5:60940285-60940304 None:intergenic 25.0%
!!! TTTTTAACTGTGACAGAAAA+GGG - Chr5:60939686-60939705 MsG0580027441.01.T01:intron 25.0%
!!! TTTTTAAGTTCTCCCAAATT+AGG - Chr5:60941533-60941552 MsG0580027441.01.T01:intron 25.0%
AAAAGAGTGAAATTCAAGAG+GGG + Chr5:60942412-60942431 None:intergenic 30.0%
AAGTTAGTAAGCATTCTGTT+AGG + Chr5:60942332-60942351 None:intergenic 30.0%
ACAGTTAAAAACTGCTTATG+TGG + Chr5:60939677-60939696 None:intergenic 30.0%
ACTATATCAGATGAGATAGT+AGG + Chr5:60939949-60939968 None:intergenic 30.0%
ACTTTGACAGTAAAGGATAA+TGG + Chr5:60938735-60938754 None:intergenic 30.0%
ATGAAAAAAAATCGACTAGG+AGG - Chr5:60938504-60938523 MsG0580027441.01.T01:intron 30.0%
CAAAAAGAGTGAAATTCAAG+AGG + Chr5:60942414-60942433 None:intergenic 30.0%
CATAATGAAAACGTTACACA+AGG - Chr5:60941028-60941047 MsG0580027441.01.T01:intron 30.0%
CCAAACTGAAATCAAACTTA+AGG + Chr5:60941633-60941652 None:intergenic 30.0%
CGAATCAAAATAAGTGATTC+TGG + Chr5:60939204-60939223 None:intergenic 30.0%
CGTATGAAAAAAAATCGACT+AGG - Chr5:60938501-60938520 MsG0580027441.01.T01:intron 30.0%
CTAGTGTGATCTATATAGAA+GGG - Chr5:60938036-60938055 MsG0580027441.01.T01:intron 30.0%
GAACTTAAAAAACGTATTGG+AGG + Chr5:60941524-60941543 None:intergenic 30.0%
GAAGAAAAATGGCTATAGAA+TGG - Chr5:60939453-60939472 MsG0580027441.01.T01:intron 30.0%
GAGATAAAGAAGATGAAGAT+GGG + Chr5:60938842-60938861 None:intergenic 30.0%
GATTTCAGTTTGATTAGATC+AGG - Chr5:60941423-60941442 MsG0580027441.01.T01:intron 30.0%
GGAGAACTTAAAAAACGTAT+TGG + Chr5:60941527-60941546 None:intergenic 30.0%
TAAGGATGAAAGTGATGATT+TGG + Chr5:60938804-60938823 None:intergenic 30.0%
TAAGGATGAAGATGATGATT+TGG - Chr5:60939627-60939646 MsG0580027441.01.T01:intron 30.0%
TAATTATTGTTAAACGACGG+TGG - Chr5:60938570-60938589 MsG0580027441.01.T01:intron 30.0%
TACTATGTTGTAACTGATGA+AGG - Chr5:60937777-60937796 MsG0580027441.01.T01:three_prime_UTR 30.0%
TAGAAACATTGAGAACTTGT+TGG + Chr5:60939354-60939373 None:intergenic 30.0%
TAGTGTAATGAAGATACTCA+AGG + Chr5:60941903-60941922 None:intergenic 30.0%
TCTCAATTGTGTTACCATAA+TGG - Chr5:60939172-60939191 MsG0580027441.01.T01:intron 30.0%
TGAAAAAAAATCGACTAGGA+GGG - Chr5:60938505-60938524 MsG0580027441.01.T01:intron 30.0%
TGAGATAAAGAAGATGAAGA+TGG + Chr5:60938843-60938862 None:intergenic 30.0%
TGCAAAGAAAGAAAAGATTG+AGG - Chr5:60941186-60941205 MsG0580027441.01.T01:intron 30.0%
TGGTTTCATAAGGAGTTATT+TGG + Chr5:60940469-60940488 None:intergenic 30.0%
TTAACAGACTTTGACAGTAA+AGG + Chr5:60938742-60938761 None:intergenic 30.0%
TTCAGAAAAATCTATGGATC+TGG + Chr5:60940279-60940298 None:intergenic 30.0%
TTGGTATTCAGAAGCTTATT+AGG - Chr5:60940352-60940371 MsG0580027441.01.T01:intron 30.0%
! AAATGGCTATAGAATGGTTT+TGG - Chr5:60939459-60939478 MsG0580027441.01.T01:intron 30.0%
! AAATTCCAGTTTTCCAATCA+AGG + Chr5:60941144-60941163 None:intergenic 30.0%
! ACAGAATGCTTACTAACTTT+TGG - Chr5:60942333-60942352 MsG0580027441.01.T01:CDS 30.0%
! AGTAGTGATAGTGAATTTGA+AGG - Chr5:60939229-60939248 MsG0580027441.01.T01:intron 30.0%
! ATCAAACTTAAGGGTATGTT+TGG + Chr5:60941623-60941642 None:intergenic 30.0%
! ATTTGTTTGCTTTGGTTCAA+GGG - Chr5:60941295-60941314 MsG0580027441.01.T01:intron 30.0%
! ATTTTGCATTTTGAACACTC+AGG + Chr5:60938421-60938440 None:intergenic 30.0%
! CCTTAAGTTTGATTTCAGTT+TGG - Chr5:60941630-60941649 MsG0580027441.01.T01:intron 30.0%
! CTCTTGAATTTCACTCTTTT+TGG - Chr5:60942412-60942431 MsG0580027441.01.T01:CDS 30.0%
! CTTTAGATGGGATTTGAAAT+GGG - Chr5:60939270-60939289 MsG0580027441.01.T01:intron 30.0%
! GCTTTCATGTAAAATGGATT+TGG + Chr5:60939378-60939397 None:intergenic 30.0%
! TCAAACTTAAGGGTATGTTT+GGG + Chr5:60941622-60941641 None:intergenic 30.0%
! TGCCATAATAACCCTTTTAA+GGG + Chr5:60938936-60938955 None:intergenic 30.0%
! TTCTTTTGCATTCTTGTGAT+CGG - Chr5:60937896-60937915 MsG0580027441.01.T01:exon 30.0%
! TTCTTTTTGTGGCATATGAA+CGG - Chr5:60941240-60941259 MsG0580027441.01.T01:intron 30.0%
! TTTAAGTTCTCCCAAATTAG+GGG - Chr5:60941535-60941554 MsG0580027441.01.T01:intron 30.0%
!! AAAACAGACATTTTGATCGA+GGG - Chr5:60940183-60940202 MsG0580027441.01.T01:intron 30.0%
!! AGTTTTTGAGAATCTAGTTG+AGG - Chr5:60942237-60942256 MsG0580027441.01.T01:intron 30.0%
!! ATGATAGTGAAGCTTTAGAT+GGG - Chr5:60939258-60939277 MsG0580027441.01.T01:intron 30.0%
!! CTATTTGGATTGGTTTCATA+AGG + Chr5:60940479-60940498 None:intergenic 30.0%
!! GTTTTTAACTGTGACAGAAA+AGG - Chr5:60939685-60939704 MsG0580027441.01.T01:intron 30.0%
!! TATGATAGTGAAGCTTTAGA+TGG - Chr5:60939257-60939276 MsG0580027441.01.T01:intron 30.0%
!! TGCTTATTTTCTCTATCTAG+GGG - Chr5:60940305-60940324 MsG0580027441.01.T01:intron 30.0%
!! TTTTATTTGCAACAGGGTTT+GGG + Chr5:60937499-60937518 None:intergenic 30.0%
!! TTTTTATTTGCAACAGGGTT+TGG + Chr5:60937500-60937519 None:intergenic 30.0%
!!! TACAGTATTTTTTCCCAAAC+AGG - Chr5:60940415-60940434 MsG0580027441.01.T01:intron 30.0%
!!! TGCTGTGTTTTTTCTTTTTG+TGG - Chr5:60941229-60941248 MsG0580027441.01.T01:intron 30.0%
!!! TTACTGGTTTTCAGTTTTCA+TGG - Chr5:60940152-60940171 MsG0580027441.01.T01:intron 30.0%
AAGCTCAATCATGGATCAAA+AGG - Chr5:60939097-60939116 MsG0580027441.01.T01:intron 35.0%
AAGTGCTTATGAACCTGTTT+GGG + Chr5:60940431-60940450 None:intergenic 35.0%
AATAATTTGAACCGTGACGA+AGG + Chr5:60938303-60938322 None:intergenic 35.0%
AATATTTAAGCTAGCCCAGT+TGG - Chr5:60937952-60937971 MsG0580027441.01.T01:CDS 35.0%
ACATAAAACTTAAAGGACCC+AGG - Chr5:60939778-60939797 MsG0580027441.01.T01:intron 35.0%
ACGTAAAACTTAAAGGATCC+CGG + Chr5:60938645-60938664 None:intergenic 35.0%
ACTTGACCATTGCTGAAAAT+CGG + Chr5:60941803-60941822 None:intergenic 35.0%
AGAAACTTCTGCAATGAGTA+TGG - Chr5:60939509-60939528 MsG0580027441.01.T01:intron 35.0%
AGCTCAATCATGGATCAAAA+GGG - Chr5:60939098-60939117 MsG0580027441.01.T01:intron 35.0%
AGCTCATTGAAAACAGCTTA+TGG - Chr5:60940377-60940396 MsG0580027441.01.T01:intron 35.0%
ATAAAGAGTTCGGTCCTAAA+TGG - Chr5:60939298-60939317 MsG0580027441.01.T01:intron 35.0%
ATAATTTGAACCGTGACGAA+GGG + Chr5:60938302-60938321 None:intergenic 35.0%
ATCCATATTGTATATCCCAC+AGG - Chr5:60938532-60938551 MsG0580027441.01.T01:intron 35.0%
ATCCTGTGGGATATACAATA+TGG + Chr5:60938537-60938556 None:intergenic 35.0%
ATGAAGATGAGATGAAGATC+TGG - Chr5:60939601-60939620 MsG0580027441.01.T01:intron 35.0%
ATGGGTCAGTATAAAGAGTT+CGG - Chr5:60939288-60939307 MsG0580027441.01.T01:intron 35.0%
CAAGCTATGAAGTTAAGAGA+TGG - Chr5:60937609-60937628 MsG0580027441.01.T01:three_prime_UTR 35.0%
CGGAAATAGGACTAAATAGA+CGG + Chr5:60940066-60940085 None:intergenic 35.0%
CTGATTATGTGGTTGTTTAG+TGG - Chr5:60938765-60938784 MsG0580027441.01.T01:intron 35.0%
GAAAAAAAATCGACTAGGAG+GGG - Chr5:60938506-60938525 MsG0580027441.01.T01:intron 35.0%
GAAAACTGGAATTTCAGCAA+AGG - Chr5:60941150-60941169 MsG0580027441.01.T01:intron 35.0%
GAAACTTAGTGCCTATAACA+TGG - Chr5:60938592-60938611 MsG0580027441.01.T01:intron 35.0%
GCTAGTGTGATCTATATAGA+AGG - Chr5:60938035-60938054 MsG0580027441.01.T01:intron 35.0%
GCTCATTGAAAACAGCTTAT+GGG - Chr5:60940378-60940397 MsG0580027441.01.T01:intron 35.0%
GGATGTCATTAGTTAAGTGT+TGG - Chr5:60938176-60938195 MsG0580027441.01.T01:intron 35.0%
GTATGTTTGGGAATTCAAGA+GGG + Chr5:60941610-60941629 None:intergenic 35.0%
TAAAAGGGTTATTATGGCAC+CGG - Chr5:60938937-60938956 MsG0580027441.01.T01:CDS 35.0%
TAAGTGCTTATGAACCTGTT+TGG + Chr5:60940432-60940451 None:intergenic 35.0%
TACTTGGATCAATCCATTGT+TGG + Chr5:60938222-60938241 None:intergenic 35.0%
TATGTTTGGGAATTCAAGAG+GGG + Chr5:60941609-60941628 None:intergenic 35.0%
TGAAGATGAGATGAAGATCT+GGG - Chr5:60939602-60939621 MsG0580027441.01.T01:intron 35.0%
TGCCCTTAAAAGGGTTATTA+TGG - Chr5:60938931-60938950 MsG0580027441.01.T01:CDS 35.0%
TGCTCTCATTGTGTACATTA+TGG - Chr5:60942592-60942611 MsG0580027441.01.T01:five_prime_UTR 35.0%
TGGAATTTCAGCAAAGGATT+GGG - Chr5:60941156-60941175 MsG0580027441.01.T01:intron 35.0%
TGTGAGAACACTCATACAAT+AGG + Chr5:60940704-60940723 None:intergenic 35.0%
TTAAGCAGTAAGCTCAATCA+TGG - Chr5:60939088-60939107 MsG0580027441.01.T01:intron 35.0%
TTTGACCCTTCAAGTGATAA+GGG - Chr5:60938251-60938270 MsG0580027441.01.T01:intron 35.0%
! AACGTATTGGAGGAGAATTT+TGG + Chr5:60941514-60941533 None:intergenic 35.0%
! AATTTTCTCGAGTGTTTTCG+CGG - Chr5:60940673-60940692 MsG0580027441.01.T01:intron 35.0%
! ACACATTTAGTTCCTGAACT+TGG + Chr5:60937717-60937736 None:intergenic 35.0%
! ATGAAGAGTGGATAAGCTTT+TGG - Chr5:60940333-60940352 MsG0580027441.01.T01:intron 35.0%
! GAAATTATGTGGCATGCTTT+TGG - Chr5:60941080-60941099 MsG0580027441.01.T01:intron 35.0%
! GATTTGTTTGCTTTGGTTCA+AGG - Chr5:60941294-60941313 MsG0580027441.01.T01:intron 35.0%
! GCTTTAGATGGGATTTGAAA+TGG - Chr5:60939269-60939288 MsG0580027441.01.T01:intron 35.0%
! GTGCCATAATAACCCTTTTA+AGG + Chr5:60938937-60938956 None:intergenic 35.0%
! TAGTTTCTGGATTGCAACTT+TGG - Chr5:60942129-60942148 MsG0580027441.01.T01:intron 35.0%
! TATTGGAGGAGAATTTTGGA+GGG + Chr5:60941510-60941529 None:intergenic 35.0%
! TCAATACGTAGGTCTTTTAC+TGG - Chr5:60940136-60940155 MsG0580027441.01.T01:intron 35.0%
! TCTTTTGCATTCTTGTGATC+GGG - Chr5:60937897-60937916 MsG0580027441.01.T01:exon 35.0%
! TGATGAACGTTGTTTCCAAA+AGG + Chr5:60941010-60941029 None:intergenic 35.0%
! TTTCCTAGAGGAAGTATAAC+AGG + Chr5:60941932-60941951 None:intergenic 35.0%
! TTTTCCTTGACATTGCTACA+GGG - Chr5:60942025-60942044 MsG0580027441.01.T01:intron 35.0%
! TTTTTCCTTGACATTGCTAC+AGG - Chr5:60942024-60942043 MsG0580027441.01.T01:intron 35.0%
!! AATAACCCTTTTAAGGGCAT+TGG + Chr5:60938930-60938949 None:intergenic 35.0%
!! AATGAGAGCACCAAAATGAT+AGG + Chr5:60942582-60942601 None:intergenic 35.0%
!! AATGGATTGATCCAAGTAGT+TGG - Chr5:60938224-60938243 MsG0580027441.01.T01:intron 35.0%
!! CAAAACAGACATTTTGATCG+AGG - Chr5:60940182-60940201 MsG0580027441.01.T01:intron 35.0%
!! GATTCTGGTTCTTTCCATTA+TGG + Chr5:60939189-60939208 None:intergenic 35.0%
!! GTGGTTCTAAATTCGGAAAT+AGG + Chr5:60940079-60940098 None:intergenic 35.0%
!!! GATTTTTTTTCATACGCCAG+TGG + Chr5:60938497-60938516 None:intergenic 35.0%
!!! TTGTCTCTTGCTTTTTGTTG+AGG + Chr5:60937528-60937547 None:intergenic 35.0%
AAAAAAGGCCAAATACCTCC+CGG - Chr5:60938623-60938642 MsG0580027441.01.T01:intron 40.0%
AAACAAATGCTAGAGTCGCT+TGG - Chr5:60942075-60942094 MsG0580027441.01.T01:intron 40.0%
AAACTAAAACGCAGAGACCA+AGG + Chr5:60942115-60942134 None:intergenic 40.0%
AACTAAAACGCAGAGACCAA+GGG + Chr5:60942114-60942133 None:intergenic 40.0%
AACTTCTGCAATGAGTATGG+TGG - Chr5:60939512-60939531 MsG0580027441.01.T01:intron 40.0%
AAGTGATAAGGGGTTCAATC+TGG - Chr5:60938262-60938281 MsG0580027441.01.T01:intron 40.0%
AATAGCCCATAGAAGATGGT+AGG - Chr5:60940494-60940513 MsG0580027441.01.T01:intron 40.0%
AGACCTGTTATACTTCCTCT+AGG - Chr5:60941926-60941945 MsG0580027441.01.T01:intron 40.0%
AGAGAGATATGAGTTCGTTC+AGG + Chr5:60939972-60939991 None:intergenic 40.0%
AGGAACTAAATGTGTGTCTG+AGG - Chr5:60937722-60937741 MsG0580027441.01.T01:three_prime_UTR 40.0%
AGTTGAGGCAAAAGGAAACT+TGG - Chr5:60942252-60942271 MsG0580027441.01.T01:intron 40.0%
ATCCAACTCCTTAACCAACT+GGG + Chr5:60937969-60937988 None:intergenic 40.0%
ATGAAGATGGGATGAAGATC+TGG + Chr5:60938830-60938849 None:intergenic 40.0%
ATTCAAGAGGGGAAGAATTG+AGG + Chr5:60941598-60941617 None:intergenic 40.0%
CGGTGATGAATTGTAGAAGA+AGG - Chr5:60938092-60938111 MsG0580027441.01.T01:intron 40.0%
CGTAAAACTTAAAGGATCCC+GGG + Chr5:60938644-60938663 None:intergenic 40.0%
CTGGAATTTCAGCAAAGGAT+TGG - Chr5:60941155-60941174 MsG0580027441.01.T01:intron 40.0%
GAGAATCTAGTTGAGGCAAA+AGG - Chr5:60942244-60942263 MsG0580027441.01.T01:intron 40.0%
GGTATGTTTGGGAATTCAAG+AGG + Chr5:60941611-60941630 None:intergenic 40.0%
GGTCAAACTATCCAACTACT+TGG + Chr5:60938238-60938257 None:intergenic 40.0%
GGTGCAACAATTCAATACGT+AGG - Chr5:60940125-60940144 MsG0580027441.01.T01:intron 40.0%
GTTAAGGAGTTGGATGTAGT+GGG - Chr5:60937974-60937993 MsG0580027441.01.T01:CDS 40.0%
GTTTGACCCTTCAAGTGATA+AGG - Chr5:60938250-60938269 MsG0580027441.01.T01:intron 40.0%
TAAAACTTAAAGGACCCAGG+AGG - Chr5:60939781-60939800 MsG0580027441.01.T01:intron 40.0%
TACCGAGAGTGGAAATTATG+TGG - Chr5:60941069-60941088 MsG0580027441.01.T01:intron 40.0%
TATAGAGCAGCTATGACAAC+TGG - Chr5:60942469-60942488 MsG0580027441.01.T01:exon 40.0%
TCCAAATAGCCCATAGAAGA+TGG - Chr5:60940490-60940509 MsG0580027441.01.T01:intron 40.0%
TCTTCACACTATTTCCGCAA+AGG - Chr5:60937800-60937819 MsG0580027441.01.T01:three_prime_UTR 40.0%
TGAACCCCTTATCACTTGAA+GGG + Chr5:60938259-60938278 None:intergenic 40.0%
TGAAGATGGGATGAAGATCT+GGG + Chr5:60938829-60938848 None:intergenic 40.0%
TGACACTTACACTACCTTCT+GGG + Chr5:60941120-60941139 None:intergenic 40.0%
TGCCACATAATTTCCACTCT+CGG + Chr5:60941074-60941093 None:intergenic 40.0%
TGGTTTAGTATCATGTCCCT+TGG - Chr5:60942095-60942114 MsG0580027441.01.T01:intron 40.0%
TGTCTGTTGATGCACAACTT+CGG - Chr5:60940601-60940620 MsG0580027441.01.T01:intron 40.0%
TTCAAGAGGGGAAGAATTGA+GGG + Chr5:60941597-60941616 None:intergenic 40.0%
TTGAACCCCTTATCACTTGA+AGG + Chr5:60938260-60938279 None:intergenic 40.0%
TTGACCCTTCAAGTGATAAG+GGG - Chr5:60938252-60938271 MsG0580027441.01.T01:intron 40.0%
! ACCATCTTCTATGGGCTATT+TGG + Chr5:60940494-60940513 None:intergenic 40.0%
! AGCCACATACATGATAGTGA+GGG + Chr5:60938471-60938490 None:intergenic 40.0%
! ATTTTCTCGAGTGTTTTCGC+GGG - Chr5:60940674-60940693 MsG0580027441.01.T01:intron 40.0%
! CTTCTATGGGCTATTTGGAT+TGG + Chr5:60940489-60940508 None:intergenic 40.0%
! GAGATGAAGATCTGGGATTA+AGG - Chr5:60939609-60939628 MsG0580027441.01.T01:intron 40.0%
! GTATTGGAGGAGAATTTTGG+AGG + Chr5:60941511-60941530 None:intergenic 40.0%
! TTATGTGGCATGCTTTTGGA+TGG - Chr5:60941084-60941103 MsG0580027441.01.T01:intron 40.0%
! TTCCATCCGATTTTCAGCAA+TGG - Chr5:60941794-60941813 MsG0580027441.01.T01:intron 40.0%
! TTGCAGGTAACATCTCCTTT+TGG - Chr5:60940992-60941011 MsG0580027441.01.T01:intron 40.0%
! TTTAAGGCCAAATACCTCCT+GGG + Chr5:60939798-60939817 None:intergenic 40.0%
!! AAAATTGGTTTGGGCCTCTT+TGG - Chr5:60938369-60938388 MsG0580027441.01.T01:intron 40.0%
!! AAATTGGTTTGGGCCTCTTT+GGG - Chr5:60938370-60938389 MsG0580027441.01.T01:intron 40.0%
!! AGGGTGTTGAACTTGAAATC+AGG - Chr5:60941314-60941333 MsG0580027441.01.T01:intron 40.0%
AAAAAGGCCAAATACCTCCC+GGG - Chr5:60938624-60938643 MsG0580027441.01.T01:intron 45.0%
AAAACTTAAAGGATCCCGGG+AGG + Chr5:60938641-60938660 None:intergenic 45.0%
AACACGCCAATGCCCTTAAA+AGG - Chr5:60938921-60938940 MsG0580027441.01.T01:CDS 45.0%
AATCTTCATCGTGCATCCTG+TGG + Chr5:60938551-60938570 None:intergenic 45.0%
ACACGCCAATGCCCTTAAAA+GGG - Chr5:60938922-60938941 MsG0580027441.01.T01:CDS 45.0%
ACGGACGTTCACAATTTGAG+GGG + Chr5:60940047-60940066 None:intergenic 45.0%
AGACGGACGTTCACAATTTG+AGG + Chr5:60940049-60940068 None:intergenic 45.0%
ATCTCAAACCGAGGATCACA+TGG + Chr5:60941669-60941688 None:intergenic 45.0%
ATCTTCATCGTGCATCCTGT+GGG + Chr5:60938550-60938569 None:intergenic 45.0%
ATGGAAGGAAAACACCCAGA+AGG - Chr5:60941103-60941122 MsG0580027441.01.T01:intron 45.0%
ATTGTGCCAATCTCAAACCG+AGG + Chr5:60941678-60941697 None:intergenic 45.0%
CATCCAACTCCTTAACCAAC+TGG + Chr5:60937970-60937989 None:intergenic 45.0%
CCACACCTACCATCTTCTAT+GGG + Chr5:60940502-60940521 None:intergenic 45.0%
CTACAGGGAAGCAACAATGA+GGG - Chr5:60942040-60942059 MsG0580027441.01.T01:intron 45.0%
CTGACACTTACACTACCTTC+TGG + Chr5:60941121-60941140 None:intergenic 45.0%
CTGCTTATGTGGCTGTTTAG+TGG + Chr5:60939666-60939685 None:intergenic 45.0%
CTTGAAATCAGGAAGCTCGA+AGG - Chr5:60941325-60941344 MsG0580027441.01.T01:intron 45.0%
GACCATTGCTGAAAATCGGA+TGG + Chr5:60941799-60941818 None:intergenic 45.0%
GACGGACGTTCACAATTTGA+GGG + Chr5:60940048-60940067 None:intergenic 45.0%
GCATTTACAACTACCGAGAG+TGG - Chr5:60941058-60941077 MsG0580027441.01.T01:intron 45.0%
GGGATGAAGATCTGGGTTTA+AGG + Chr5:60938822-60938841 None:intergenic 45.0%
GGTTAAGGAGTTGGATGTAG+TGG - Chr5:60937973-60937992 MsG0580027441.01.T01:CDS 45.0%
GTCAGCCTTGATTGGAAAAC+TGG - Chr5:60941136-60941155 MsG0580027441.01.T01:intron 45.0%
GTCTGTTGATGCACAACTTC+GGG - Chr5:60940602-60940621 MsG0580027441.01.T01:intron 45.0%
GTGTAAGTGTCAGCCTTGAT+TGG - Chr5:60941128-60941147 MsG0580027441.01.T01:intron 45.0%
TAAGCTAGCCCAGTTGGTTA+AGG - Chr5:60937958-60937977 MsG0580027441.01.T01:CDS 45.0%
TCCACACCTACCATCTTCTA+TGG + Chr5:60940503-60940522 None:intergenic 45.0%
TGCATTCTTGTGATCGGGTT+TGG - Chr5:60937902-60937921 MsG0580027441.01.T01:exon 45.0%
! AAGAGCCACTCACATCGATT+AGG - Chr5:60942303-60942322 MsG0580027441.01.T01:CDS 45.0%
! AGAGCCACTCACATCGATTA+GGG - Chr5:60942304-60942323 MsG0580027441.01.T01:CDS 45.0%
! CAACAGGGTTTGGGTTTCTT+GGG + Chr5:60937490-60937509 None:intergenic 45.0%
! CCACATACATGATAGTGAGG+GGG + Chr5:60938469-60938488 None:intergenic 45.0%
! CGTATTGACCATGTGATCCT+CGG - Chr5:60941658-60941677 MsG0580027441.01.T01:intron 45.0%
! GAGCCACATACATGATAGTG+AGG + Chr5:60938472-60938491 None:intergenic 45.0%
! GCCACATACATGATAGTGAG+GGG + Chr5:60938470-60938489 None:intergenic 45.0%
! GTTTAAGGCCAAATACCTCC+TGG + Chr5:60939799-60939818 None:intergenic 45.0%
! TGGTTGACTCTTCCAAGTTC+AGG - Chr5:60937702-60937721 MsG0580027441.01.T01:three_prime_UTR 45.0%
! TGTGATCCTCGGTTTGAGAT+TGG - Chr5:60941669-60941688 MsG0580027441.01.T01:intron 45.0%
! TTCAATCTGGTAGCGTTGTC+AGG - Chr5:60938275-60938294 MsG0580027441.01.T01:intron 45.0%
!! AAGGGCATTGGCGTGTTTAA+TGG + Chr5:60938918-60938937 None:intergenic 45.0%
!! TAAAGGACCCAGGAGGTATT+TGG - Chr5:60939788-60939807 MsG0580027441.01.T01:intron 45.0%
!!! GGTCTCTGCGTTTTAGTTTC+TGG - Chr5:60942116-60942135 MsG0580027441.01.T01:intron 45.0%
!! ATATTAATATTAATCAAATT+CGG - Chr5:60940817-60940836 MsG0580027441.01.T01:intron 5.0%
AGCCCAGTTGGTTAAGGAGT+TGG - Chr5:60937964-60937983 MsG0580027441.01.T01:CDS 50.0%
AGGGGAAGAATTGAGGGCTT+TGG + Chr5:60941591-60941610 None:intergenic 50.0%
CCCATAGAAGATGGTAGGTG+TGG - Chr5:60940499-60940518 MsG0580027441.01.T01:intron 50.0%
CCCCCTCACTATCATGTATG+TGG - Chr5:60938466-60938485 MsG0580027441.01.T01:intron 50.0%
CTAGGGGAGCTTATGAAGAG+TGG - Chr5:60940321-60940340 MsG0580027441.01.T01:intron 50.0%
GCTACAGGGAAGCAACAATG+AGG - Chr5:60942039-60942058 MsG0580027441.01.T01:intron 50.0%
GCTTCCCTGTAGCAATGTCA+AGG + Chr5:60942032-60942051 None:intergenic 50.0%
GGGAAGAATTGAGGGCTTTG+GGG + Chr5:60941589-60941608 None:intergenic 50.0%
GGGGAAGAATTGAGGGCTTT+GGG + Chr5:60941590-60941609 None:intergenic 50.0%
GTTGATGCACAACTTCGGGA+TGG - Chr5:60940606-60940625 MsG0580027441.01.T01:intron 50.0%
TCGATGTGAGTGGCTCTTCT+TGG + Chr5:60942301-60942320 None:intergenic 50.0%
TTTGCACCACTAGCCCAAAG+AGG + Chr5:60938386-60938405 None:intergenic 50.0%
! AGGGTTTGGGTTTCTTGGGA+GGG + Chr5:60937486-60937505 None:intergenic 50.0%
! GCAACAGGGTTTGGGTTTCT+TGG + Chr5:60937491-60937510 None:intergenic 50.0%
! GTGGCATGCTTTTGGATGGA+AGG - Chr5:60941088-60941107 MsG0580027441.01.T01:intron 50.0%
!! AAAGGATCCCGGGAGGTATT+TGG + Chr5:60938634-60938653 None:intergenic 50.0%
!! GGATGTAGTGGGTTCAAACC+CGG - Chr5:60937985-60938004 MsG0580027441.01.T01:CDS 50.0%
CATGTATGTGGCTCAGCCAC+TGG - Chr5:60938478-60938497 MsG0580027441.01.T01:intron 55.0%
GTTGTCAGGACCCTTCGTCA+CGG - Chr5:60938289-60938308 MsG0580027441.01.T01:intron 55.0%
! CAGGGTTTGGGTTTCTTGGG+AGG + Chr5:60937487-60937506 None:intergenic 55.0%
! TTTGGGCCTCTTTGGGCTAG+TGG - Chr5:60938377-60938396 MsG0580027441.01.T01:intron 55.0%
GGCGCCCTAATCGATGTGAG+TGG + Chr5:60942311-60942330 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 60937481 60942613 60937481 ID=MsG0580027441.01;Name=MsG0580027441.01
Chr5 mRNA 60937481 60942613 60937481 ID=MsG0580027441.01.T01;Parent=MsG0580027441.01;Name=MsG0580027441.01.T01;_AED=0.39;_eAED=0.39;_QI=134|1|1|1|1|1|4|423|212
Chr5 exon 60937481 60938048 60937481 ID=MsG0580027441.01.T01:exon:43091;Parent=MsG0580027441.01.T01
Chr5 exon 60938702 60938778 60938702 ID=MsG0580027441.01.T01:exon:43090;Parent=MsG0580027441.01.T01
Chr5 exon 60938887 60939096 60938887 ID=MsG0580027441.01.T01:exon:43089;Parent=MsG0580027441.01.T01
Chr5 exon 60942273 60942613 60942273 ID=MsG0580027441.01.T01:exon:43088;Parent=MsG0580027441.01.T01
Chr5 five_prime_UTR 60942480 60942613 60942480 ID=MsG0580027441.01.T01:five_prime_utr;Parent=MsG0580027441.01.T01
Chr5 CDS 60942273 60942479 60942273 ID=MsG0580027441.01.T01:cds;Parent=MsG0580027441.01.T01
Chr5 CDS 60938887 60939096 60938887 ID=MsG0580027441.01.T01:cds;Parent=MsG0580027441.01.T01
Chr5 CDS 60938702 60938778 60938702 ID=MsG0580027441.01.T01:cds;Parent=MsG0580027441.01.T01
Chr5 CDS 60937904 60938048 60937904 ID=MsG0580027441.01.T01:cds;Parent=MsG0580027441.01.T01
Chr5 three_prime_UTR 60937481 60937903 60937481 ID=MsG0580027441.01.T01:three_prime_utr;Parent=MsG0580027441.01.T01
Gene Sequence

>MsG0580027441.01.T01

ATGAAGTTAAGAGATGGAAGTGAAATCACTATGCTGCTAGTATTGTTATTGTGCTTAACAACTCTCTTTCTAAAAACAGAAGCTATTTGGTTGACTCTTCCAAGTTCAGGAACTAAATGTGTGTCTGAGGATATTCAAACACATGTCGTTGTTTTAGCTGATTACTATGTTGTAACTGATGAAGGTCTTCACACTATTTCCGCAAAGGTAACATCTCCTTTTGGAAACAACGTTCATCATAATGAAAACGTTACACAAGGACAGTTTGCATTTACAACTACCGAGAGTGGAAATTATGTGGCATGCTTTTGGATGGAAGGAAAACACCCAGAAGGTAGTGTAAGTGTCAGCCTTGATTGGAAAACTGGAATTTCAGCAAAGGATTGGGATTCTGTTGCAAAGAAAGAAAAGATTGAGGGTGTTGAACTTGAAATCAGGAAGCTCGAAGGAATAGTAGATGCCATCCACGATTATCTAATTTATTTGAAGGAAAAGGAAGCAACAATGAGGGAAGTGAGTGAAAAAACAAATGCTAGAGTCGCTTGGTTTAGTATCATGTCCCTTGGTCTCTGCGTTTTAGTTTCTGGATTGCAACTTTGGTATCTACAACGCTACTTTCGAAAGAAGAAGCTCATATAG

Protein sequence

>MsG0580027441.01.T01

MKLRDGSEITMLLVLLLCLTTLFLKTEAIWLTLPSSGTKCVSEDIQTHVVVLADYYVVTDEGLHTISAKVTSPFGNNVHHNENVTQGQFAFTTTESGNYVACFWMEGKHPEGSVSVSLDWKTGISAKDWDSVAKKEKIEGVELEIRKLEGIVDAIHDYLIYLKEKEATMREVSEKTNARVAWFSIMSLGLCVLVSGLQLWYLQRYFRKKKLI*