AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017102.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017102.01.T01 MTR_3g100980 82.587 201 25 2 41 241 87 277 1.25e-112 339
MsG0380017102.01.T01 MTR_3g100980 88.073 109 10 1 244 349 460 568 9.72e-49 172
MsG0380017102.01.T01 MTR_3g100980 72.489 229 25 3 41 241 87 305 1.55e-106 324
MsG0380017102.01.T01 MTR_3g100980 88.073 109 10 1 244 349 488 596 1.75e-48 172
MsG0380017102.01.T01 MTR_1g085090 45.349 172 80 2 54 225 100 257 3.36e-42 155
MsG0380017102.01.T01 MTR_1g085090 44.144 111 48 3 244 340 449 559 1.52e-18 87.0
MsG0380017102.01.T01 MTR_5g038380 37.443 219 123 3 58 267 107 320 1.36e-41 153
MsG0380017102.01.T01 MTR_5g038380 40.426 94 48 2 246 331 481 574 1.02e-15 78.6
MsG0380017102.01.T01 MTR_2g017750 43.617 188 99 4 58 242 113 296 4.38e-41 152
MsG0380017102.01.T01 MTR_2g017750 48.810 84 38 1 253 331 505 588 4.49e-18 85.9
MsG0380017102.01.T01 MTR_7g111260 42.222 180 95 3 66 245 106 276 8.05e-38 142
MsG0380017102.01.T01 MTR_7g111260 45.192 104 46 3 244 337 449 551 1.09e-16 81.6
MsG0380017102.01.T01 MTR_8g087810 42.515 167 93 2 58 223 100 264 1.15e-37 142
MsG0380017102.01.T01 MTR_8g087810 50.588 85 36 1 253 331 491 575 7.97e-12 66.6
MsG0380017102.01.T01 MTR_8g087780 38.919 185 105 4 64 245 106 285 4.02e-37 140
MsG0380017102.01.T01 MTR_4g123537 42.038 157 83 1 64 220 126 274 5.30e-36 138
MsG0380017102.01.T01 MTR_4g123537 42.857 98 46 2 244 331 473 570 2.23e-14 74.7
MsG0380017102.01.T01 MTR_7g098180 38.547 179 108 2 64 242 116 292 8.45e-36 137
MsG0380017102.01.T01 MTR_5g055000 36.058 208 126 2 18 223 55 257 2.24e-35 135
MsG0380017102.01.T01 MTR_5g055000 36.735 98 57 1 253 345 477 574 1.51e-17 84.3
MsG0380017102.01.T01 MTR_4g107670 42.038 157 85 1 64 220 109 259 2.66e-34 132
MsG0380017102.01.T01 MTR_4g107670 45.263 95 44 2 246 332 478 572 8.62e-17 82.0
MsG0380017102.01.T01 MTR_8g469310 41.104 163 91 1 58 220 105 262 4.58e-34 132
MsG0380017102.01.T01 MTR_8g469310 36.559 93 54 1 244 331 479 571 1.43e-13 72.0
MsG0380017102.01.T01 MTR_7g067010 39.037 187 104 4 64 250 109 285 3.34e-33 129
MsG0380017102.01.T01 MTR_7g067010 41.860 86 44 2 253 333 479 563 5.40e-12 67.4
MsG0380017102.01.T01 MTR_7g098200 38.690 168 101 1 64 231 114 279 5.85e-33 129
MsG0380017102.01.T01 MTR_7g098200 38.690 168 101 1 64 231 114 279 6.90e-33 129
MsG0380017102.01.T01 MTR_7g098200 38.788 165 99 1 67 231 3 165 1.36e-32 127
MsG0380017102.01.T01 MTR_4g015080 37.129 202 114 4 64 265 119 307 4.34e-32 126
MsG0380017102.01.T01 MTR_4g015080 43.023 86 43 2 253 333 489 573 3.00e-13 71.2
MsG0380017102.01.T01 MTR_3g112470 38.365 159 92 1 64 222 108 260 1.04e-31 125
MsG0380017102.01.T01 MTR_3g112470 35.714 98 56 3 253 344 471 567 1.22e-11 66.2
MsG0380017102.01.T01 MTR_3g112460 38.365 159 92 1 64 222 108 260 1.94e-31 124
MsG0380017102.01.T01 MTR_3g112460 34.343 99 58 3 253 345 471 568 2.21e-11 65.5
MsG0380017102.01.T01 MTR_1g041885 34.054 185 118 2 58 242 61 241 6.28e-31 123
MsG0380017102.01.T01 MTR_7g098040 40.000 160 92 2 64 222 119 275 1.32e-30 122
MsG0380017102.01.T01 MTR_7g098040 39.759 83 44 2 253 330 490 571 7.16e-11 63.9
MsG0380017102.01.T01 MTR_1g041875 36.420 162 100 1 58 219 108 266 1.94e-30 122
MsG0380017102.01.T01 MTR_7g098230 36.872 179 110 2 64 242 111 286 3.33e-30 121
MsG0380017102.01.T01 MTR_5g012270 35.119 168 104 1 58 225 108 270 6.68e-30 120
MsG0380017102.01.T01 MTR_5g012270 42.222 90 45 3 254 340 493 578 7.81e-16 79.0
MsG0380017102.01.T01 MTR_1g075440 34.286 175 112 1 58 232 107 278 1.70e-29 119
MsG0380017102.01.T01 MTR_7g098150 37.821 156 95 1 64 219 118 271 3.69e-29 117
MsG0380017102.01.T01 MTR_7g098220 38.272 162 98 1 64 225 115 274 6.44e-29 117
MsG0380017102.01.T01 MTR_7g098220 38.272 162 98 1 64 225 71 230 6.48e-29 117
MsG0380017102.01.T01 MTR_3g112450 37.736 159 95 1 64 222 108 262 7.54e-29 117
MsG0380017102.01.T01 MTR_3g112450 35.714 98 57 2 254 345 473 570 4.07e-12 67.8
MsG0380017102.01.T01 MTR_1g041835 33.333 168 109 1 58 225 106 270 2.03e-28 116
MsG0380017102.01.T01 MTR_1g041815 33.951 162 104 1 58 219 106 264 2.61e-28 115
MsG0380017102.01.T01 MTR_7g098090 37.179 156 96 1 64 219 118 271 1.15e-27 114
MsG0380017102.01.T01 MTR_1g042310 35.256 156 98 1 64 219 67 219 1.93e-27 113
MsG0380017102.01.T01 MTR_1g042310 35.256 156 98 1 64 219 74 226 2.10e-27 113
MsG0380017102.01.T01 MTR_1g042310 35.256 156 98 1 64 219 111 263 2.19e-27 113
MsG0380017102.01.T01 MTR_7g088820 34.839 155 96 2 68 222 4 153 3.18e-27 112
MsG0380017102.01.T01 MTR_7g088820 36.000 100 57 2 253 345 377 476 2.16e-12 68.2
MsG0380017102.01.T01 MTR_3g462710 39.130 161 91 2 64 224 109 262 3.60e-27 112
MsG0380017102.01.T01 MTR_3g462710 36.905 84 47 2 253 331 481 563 4.41e-11 64.3
MsG0380017102.01.T01 MTR_7g088820 34.839 155 96 2 68 222 52 201 5.43e-27 112
MsG0380017102.01.T01 MTR_7g088820 36.000 100 57 2 253 345 425 524 2.68e-12 68.2
MsG0380017102.01.T01 MTR_7g088820 34.839 155 96 2 68 222 114 263 5.81e-27 112
MsG0380017102.01.T01 MTR_7g088820 36.000 100 57 2 253 345 487 586 2.54e-12 68.2
MsG0380017102.01.T01 MTR_7g098160 36.943 157 95 2 64 219 118 271 6.91e-27 112
MsG0380017102.01.T01 MTR_3g462710 38.994 159 90 2 66 224 2 153 1.50e-26 110
MsG0380017102.01.T01 MTR_3g462710 36.905 84 47 2 253 331 372 454 2.37e-11 65.1
MsG0380017102.01.T01 MTR_7g006540 39.568 139 84 0 84 222 169 307 7.68e-26 108
MsG0380017102.01.T01 MTR_7g088825 32.515 163 105 2 59 221 102 259 1.88e-25 107
MsG0380017102.01.T01 MTR_7g088825 36.458 96 58 1 253 345 484 579 5.14e-15 76.6
MsG0380017102.01.T01 MTR_7g065080 36.875 160 94 2 64 223 29 181 5.15e-25 105
MsG0380017102.01.T01 MTR_7g065080 36.875 160 94 2 64 223 116 268 6.16e-25 106
MsG0380017102.01.T01 MTR_4g107610 35.185 162 102 1 64 225 116 274 1.18e-24 105
MsG0380017102.01.T01 MTR_4g114340 36.527 167 99 2 60 225 105 265 4.65e-24 103
MsG0380017102.01.T01 MTR_4g114340 44.048 84 41 2 253 331 477 559 2.43e-15 77.4
MsG0380017102.01.T01 MTR_3g072300 34.356 163 99 2 64 225 109 264 5.46e-24 103
MsG0380017102.01.T01 MTR_5g085850 32.738 168 112 1 58 225 109 275 2.90e-23 101
MsG0380017102.01.T01 MTR_5g085850 48.101 79 39 2 254 331 479 556 1.10e-15 78.6
MsG0380017102.01.T01 MTR_2g005130 31.383 188 117 3 58 239 119 300 3.24e-23 101
MsG0380017102.01.T01 MTR_2g005130 46.429 84 39 1 254 331 480 563 2.09e-19 89.7
MsG0380017102.01.T01 MTR_4g019580 35.625 160 96 2 64 223 121 273 3.95e-23 100
MsG0380017102.01.T01 MTR_5g012290 36.310 168 103 1 58 225 106 269 6.46e-23 100
MsG0380017102.01.T01 MTR_5g012290 42.222 90 45 3 254 340 491 576 1.00e-14 75.5
MsG0380017102.01.T01 MTR_5g038060 32.143 168 113 1 58 225 110 276 1.16e-22 99.4
MsG0380017102.01.T01 MTR_7g088790 34.194 155 97 2 68 222 118 267 3.25e-22 98.2
MsG0380017102.01.T01 MTR_7g088790 38.372 86 50 1 253 335 491 576 1.06e-13 72.4
MsG0380017102.01.T01 MTR_4g101380 32.778 180 118 1 46 225 94 270 4.16e-22 97.8
MsG0380017102.01.T01 MTR_4g101380 45.556 90 42 3 254 340 494 579 5.16e-11 64.3
MsG0380017102.01.T01 MTR_4g033330 33.728 169 105 4 93 256 132 298 5.68e-22 97.4
MsG0380017102.01.T01 MTR_3g069440 38.636 132 81 0 92 223 138 269 9.59e-22 96.7
MsG0380017102.01.T01 MTR_7g064780 32.317 164 106 1 64 227 111 269 1.53e-21 96.3
MsG0380017102.01.T01 MTR_3g069500 37.405 131 82 0 93 223 141 271 5.19e-21 94.4
MsG0380017102.01.T01 MTR_4g033325 33.784 148 94 2 99 242 12 159 1.17e-20 92.8
MsG0380017102.01.T01 MTR_7g010820 35.338 133 86 0 93 225 136 268 1.31e-20 93.2
MsG0380017102.01.T01 MTR_4g033325 33.784 148 94 2 99 242 38 185 1.39e-20 92.8
MsG0380017102.01.T01 MTR_3g069420 33.333 135 90 0 89 223 136 270 1.50e-20 93.2
MsG0380017102.01.T01 MTR_4g107530 30.864 162 109 1 64 225 118 276 1.58e-20 93.2
MsG0380017102.01.T01 MTR_4g033325 33.784 148 94 2 99 242 136 283 1.72e-20 92.8
MsG0380017102.01.T01 MTR_7g051830 36.250 160 88 3 64 223 110 255 3.61e-20 92.0
MsG0380017102.01.T01 MTR_4g033315 34.014 147 91 3 90 232 129 273 4.99e-20 91.7
MsG0380017102.01.T01 MTR_4g033310 34.014 147 91 3 90 232 129 273 4.99e-20 91.7
MsG0380017102.01.T01 MTR_4g033385 33.121 157 96 3 93 242 32 186 1.57e-19 89.7
MsG0380017102.01.T01 MTR_4g033395 33.121 157 96 3 93 242 133 287 2.65e-19 89.4
MsG0380017102.01.T01 MTR_4g033375 37.097 124 76 1 99 220 137 260 3.24e-19 89.0
MsG0380017102.01.T01 MTR_7g064800 31.928 166 106 2 64 227 111 271 3.90e-19 89.0
MsG0380017102.01.T01 MTR_7g051880 33.750 160 92 2 64 223 110 255 4.01e-19 88.6
MsG0380017102.01.T01 MTR_3g005010 31.325 166 108 3 95 256 126 289 7.73e-19 87.8
MsG0380017102.01.T01 MTR_0294s0020 33.333 147 94 2 99 241 136 282 1.05e-18 87.4
MsG0380017102.01.T01 MTR_2g101650 32.515 163 105 3 64 225 109 267 1.19e-18 87.4
MsG0380017102.01.T01 MTR_1g026740 32.278 158 103 2 93 248 125 280 1.32e-18 87.4
MsG0380017102.01.T01 MTR_1g116930 33.858 127 83 1 93 219 133 258 1.95e-18 87.0
MsG0380017102.01.T01 MTR_4g098800 30.864 162 108 1 64 225 121 278 1.97e-18 86.7
MsG0380017102.01.T01 MTR_4g098800 30.864 162 108 1 64 225 186 343 2.66e-18 86.7
MsG0380017102.01.T01 MTR_1g026750 33.803 142 88 3 81 222 118 253 4.89e-18 85.5
MsG0380017102.01.T01 MTR_5g014150 32.090 134 91 0 92 225 153 286 5.36e-18 85.5
MsG0380017102.01.T01 MTR_7g052600 34.375 160 91 2 64 223 110 255 5.93e-18 85.1
MsG0380017102.01.T01 MTR_1g026770 35.172 145 86 5 81 224 115 252 2.43e-17 83.6
MsG0380017102.01.T01 MTR_4g107510 29.114 158 108 1 68 225 125 278 2.99e-17 83.2
MsG0380017102.01.T01 MTR_7g005930 22.837 289 193 7 64 329 120 401 3.29e-17 83.2
MsG0380017102.01.T01 MTR_2g101610 31.551 187 120 4 64 248 112 292 7.88e-17 82.0
MsG0380017102.01.T01 MTR_2g093640 32.639 144 87 3 77 219 119 253 1.63e-16 80.9
MsG0380017102.01.T01 MTR_8g469480 28.667 150 106 1 76 225 135 283 1.97e-16 80.9
MsG0380017102.01.T01 MTR_2g101590 31.551 187 120 4 64 248 111 291 2.54e-16 80.5
MsG0380017102.01.T01 MTR_7g013270 25.773 194 132 4 77 268 188 371 6.69e-16 79.3
MsG0380017102.01.T01 MTR_2g101640 30.769 169 111 3 58 225 102 265 1.13e-15 78.6
MsG0380017102.01.T01 MTR_1g009200 29.825 171 112 3 58 225 106 271 5.16e-15 76.6
MsG0380017102.01.T01 MTR_3g014790 32.787 122 82 0 103 224 118 239 1.06e-14 75.5
MsG0380017102.01.T01 MTR_4g124330 34.545 110 51 1 99 208 18 106 1.67e-14 69.7
MsG0380017102.01.T01 MTR_4g011280 30.220 182 120 4 64 243 117 293 2.86e-14 74.3
MsG0380017102.01.T01 MTR_1g084940 47.826 69 36 0 94 162 88 156 6.56e-14 68.9
MsG0380017102.01.T01 MTR_2g093160 27.711 166 112 2 60 225 102 259 9.69e-14 72.4
MsG0380017102.01.T01 MTR_2g093180 27.517 149 100 2 77 225 119 259 1.11e-13 72.4
MsG0380017102.01.T01 MTR_8g038880 31.469 143 96 1 100 240 118 260 1.12e-13 72.4
MsG0380017102.01.T01 MTR_8g103233 29.448 163 109 2 64 225 102 259 2.19e-13 71.6
MsG0380017102.01.T01 MTR_4g107580 26.061 165 116 3 59 222 104 263 8.63e-13 69.7
MsG0380017102.01.T01 MTR_5g038190 27.381 168 121 1 58 225 103 269 7.55e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017102.01.T01 AT1G27040 41.206 199 101 2 64 249 80 275 3.23e-45 162
MsG0380017102.01.T01 AT1G27040 45.161 93 42 4 246 330 437 528 9.81e-16 78.6
MsG0380017102.01.T01 AT1G27040 41.206 199 101 2 64 249 112 307 3.40e-45 162
MsG0380017102.01.T01 AT1G27040 45.161 93 42 4 246 330 469 560 8.78e-16 79.0
MsG0380017102.01.T01 AT1G27040 41.206 199 101 2 64 249 108 303 3.68e-45 162
MsG0380017102.01.T01 AT1G27040 45.161 93 42 4 246 330 465 556 9.66e-16 78.6
MsG0380017102.01.T01 AT1G69850 48.052 154 74 1 64 217 110 257 9.25e-41 151
MsG0380017102.01.T01 AT1G69850 39.394 99 52 2 246 336 486 584 1.81e-17 84.0
MsG0380017102.01.T01 AT3G54140 36.634 202 119 3 54 255 99 291 1.96e-38 144
MsG0380017102.01.T01 AT3G54140 36.634 202 119 3 54 255 99 291 1.96e-38 144
MsG0380017102.01.T01 AT1G62200 41.358 162 92 1 64 225 137 295 1.42e-34 134
MsG0380017102.01.T01 AT1G62200 41.358 162 92 1 64 225 137 295 1.93e-34 134
MsG0380017102.01.T01 AT1G62200 41.358 162 92 1 64 225 151 309 2.00e-34 134
MsG0380017102.01.T01 AT2G02020 30.065 306 167 8 64 348 127 406 1.05e-33 130
MsG0380017102.01.T01 AT2G02020 38.889 162 93 1 64 225 127 282 1.43e-32 127
MsG0380017102.01.T01 AT2G02040 40.123 162 91 1 64 225 126 281 2.37e-32 127
MsG0380017102.01.T01 AT5G01180 31.022 274 152 6 3 248 21 285 4.30e-32 126
MsG0380017102.01.T01 AT5G01180 43.373 83 41 2 254 331 482 563 2.68e-12 68.2
MsG0380017102.01.T01 AT5G01180 31.022 274 152 6 3 248 21 285 4.30e-32 126
MsG0380017102.01.T01 AT5G01180 43.373 83 41 2 254 331 482 563 2.68e-12 68.2
MsG0380017102.01.T01 AT5G01180 31.022 274 152 6 3 248 21 285 4.30e-32 126
MsG0380017102.01.T01 AT5G01180 43.373 83 41 2 254 331 482 563 2.68e-12 68.2
MsG0380017102.01.T01 AT2G26690 38.415 164 96 1 64 227 76 234 1.28e-31 125
MsG0380017102.01.T01 AT2G26690 41.463 82 42 2 253 329 443 523 9.58e-16 78.6
MsG0380017102.01.T01 AT2G26690 38.415 164 96 1 64 227 64 222 1.39e-31 125
MsG0380017102.01.T01 AT2G26690 41.463 82 42 2 253 329 431 511 9.58e-16 78.6
MsG0380017102.01.T01 AT2G26690 38.415 164 96 1 64 227 109 267 1.41e-31 125
MsG0380017102.01.T01 AT2G26690 41.463 82 42 2 253 329 476 556 1.18e-15 78.6
MsG0380017102.01.T01 AT1G68570 38.690 168 98 1 58 225 72 234 1.27e-29 119
MsG0380017102.01.T01 AT1G68570 41.111 90 48 1 253 337 455 544 5.72e-17 82.4
MsG0380017102.01.T01 AT1G68570 38.690 168 98 1 58 225 102 264 1.56e-29 119
MsG0380017102.01.T01 AT1G68570 41.111 90 48 1 253 337 485 574 4.43e-17 82.8
MsG0380017102.01.T01 AT3G21670 36.970 165 103 1 58 222 108 271 4.04e-29 118
MsG0380017102.01.T01 AT3G21670 40.506 79 45 2 254 331 481 558 3.19e-12 68.2
MsG0380017102.01.T01 AT5G46050 35.669 157 98 1 63 219 111 264 2.28e-28 116
MsG0380017102.01.T01 AT5G46050 35.948 153 95 1 67 219 3 152 6.41e-28 114
MsG0380017102.01.T01 AT3G45690 34.595 185 112 3 58 242 97 272 9.13e-28 114
MsG0380017102.01.T01 AT1G59740 36.747 166 102 1 58 223 120 282 3.00e-27 112
MsG0380017102.01.T01 AT1G59740 44.318 88 40 2 249 327 486 573 7.85e-17 82.0
MsG0380017102.01.T01 AT3G25280 38.608 158 83 3 64 221 106 249 3.04e-27 112
MsG0380017102.01.T01 AT3G25280 40.217 92 48 2 244 328 430 521 3.51e-13 70.9
MsG0380017102.01.T01 AT3G25260 39.241 158 82 3 64 221 106 249 3.52e-27 112
MsG0380017102.01.T01 AT3G25260 45.333 75 39 2 254 328 443 515 3.11e-12 67.8
MsG0380017102.01.T01 AT5G46040 33.333 159 103 1 64 222 112 267 4.16e-27 112
MsG0380017102.01.T01 AT3G45720 33.514 185 114 2 58 242 98 273 4.94e-27 112
MsG0380017102.01.T01 AT1G12110 38.095 168 101 1 58 225 106 270 4.95e-27 112
MsG0380017102.01.T01 AT1G12110 37.234 94 54 3 254 343 490 582 1.35e-12 69.3
MsG0380017102.01.T01 AT5G62730 35.673 171 89 3 64 232 82 233 1.23e-25 107
MsG0380017102.01.T01 AT5G62730 41.053 95 48 2 246 332 433 527 1.81e-14 74.7
MsG0380017102.01.T01 AT5G62730 35.673 171 89 3 64 232 141 292 1.46e-25 108
MsG0380017102.01.T01 AT5G62730 41.053 95 48 2 246 332 492 586 1.73e-14 75.1
MsG0380017102.01.T01 AT2G37900 40.000 140 82 2 85 223 136 274 3.58e-25 107
MsG0380017102.01.T01 AT2G37900 40.000 140 82 2 85 223 57 195 3.60e-25 106
MsG0380017102.01.T01 AT3G45710 37.126 167 96 3 59 225 101 258 4.32e-25 106
MsG0380017102.01.T01 AT3G45700 34.409 186 112 4 58 242 95 271 1.14e-24 105
MsG0380017102.01.T01 AT1G33440 39.130 161 91 3 63 222 122 276 1.31e-24 105
MsG0380017102.01.T01 AT1G33440 36.893 103 57 1 254 348 485 587 7.30e-18 85.1
MsG0380017102.01.T01 AT3G45680 35.714 168 99 3 58 225 99 257 2.59e-24 104
MsG0380017102.01.T01 AT5G13400 39.098 133 81 0 90 222 176 308 2.79e-24 104
MsG0380017102.01.T01 AT2G40460 34.568 162 98 3 64 224 109 263 1.18e-22 99.4
MsG0380017102.01.T01 AT3G53960 38.971 136 81 2 89 223 139 273 2.55e-22 98.6
MsG0380017102.01.T01 AT3G45650 32.121 165 103 2 58 222 101 256 2.11e-21 95.9
MsG0380017102.01.T01 AT3G45650 32.121 165 103 2 58 222 101 256 2.14e-21 95.5
MsG0380017102.01.T01 AT1G72125 32.121 165 104 2 102 258 141 305 2.95e-20 92.4
MsG0380017102.01.T01 AT3G45660 29.189 185 121 3 58 242 121 295 7.91e-20 90.9
MsG0380017102.01.T01 AT3G45660 29.189 185 121 3 58 242 100 274 7.91e-20 90.9
MsG0380017102.01.T01 AT3G45660 29.189 185 121 3 58 242 100 274 7.91e-20 90.9
MsG0380017102.01.T01 AT5G28470 34.161 161 102 3 64 224 102 258 8.67e-20 90.9
MsG0380017102.01.T01 AT5G28470 34.161 161 102 3 64 224 102 258 8.72e-20 90.9
MsG0380017102.01.T01 AT1G22570 35.338 133 76 2 103 227 111 241 2.03e-19 89.7
MsG0380017102.01.T01 AT1G22570 35.338 133 76 2 103 227 148 278 2.07e-19 89.7
MsG0380017102.01.T01 AT1G72120 31.250 160 106 1 103 258 142 301 4.43e-19 89.0
MsG0380017102.01.T01 AT1G22550 31.646 158 104 1 103 256 151 308 1.39e-18 87.4
MsG0380017102.01.T01 AT1G32450 31.081 148 98 1 77 224 135 278 1.54e-18 87.4
MsG0380017102.01.T01 AT1G32450 33.333 102 61 3 250 345 499 599 3.10e-11 65.1
MsG0380017102.01.T01 AT5G62680 31.056 161 108 1 64 224 128 285 1.63e-18 87.0
MsG0380017102.01.T01 AT4G21680 29.697 165 112 1 63 227 112 272 1.86e-18 87.0
MsG0380017102.01.T01 AT4G21680 36.667 90 51 2 250 334 488 576 1.92e-12 68.6
MsG0380017102.01.T01 AT1G69870 29.121 182 126 1 44 225 116 294 2.47e-18 86.7
MsG0380017102.01.T01 AT1G69870 38.462 104 54 4 252 346 511 613 2.65e-11 65.1
MsG0380017102.01.T01 AT1G52190 29.444 180 122 3 64 240 106 283 2.51e-18 86.7
MsG0380017102.01.T01 AT3G16180 30.000 180 120 3 64 240 108 284 8.36e-18 85.1
MsG0380017102.01.T01 AT1G69860 30.818 159 108 1 64 222 103 259 1.43e-17 84.3
MsG0380017102.01.T01 AT1G72140 35.156 128 75 1 103 222 150 277 9.95e-17 81.6
MsG0380017102.01.T01 AT1G22540 33.333 159 96 4 64 220 115 265 2.50e-16 80.5
MsG0380017102.01.T01 AT5G19640 31.410 156 99 2 64 219 144 291 2.06e-15 77.8
MsG0380017102.01.T01 AT1G27080 30.435 138 95 1 91 228 123 259 2.38e-15 77.4
MsG0380017102.01.T01 AT1G27080 30.435 138 95 1 91 228 81 217 2.65e-15 77.4
MsG0380017102.01.T01 AT1G18880 29.054 148 97 1 85 224 114 261 5.05e-15 76.6
MsG0380017102.01.T01 AT1G72130 33.333 138 89 1 88 222 2 139 6.65e-15 75.9
MsG0380017102.01.T01 AT1G72130 33.333 138 89 1 88 222 2 139 6.65e-15 75.9
MsG0380017102.01.T01 AT1G72130 33.333 138 89 1 88 222 120 257 1.33e-14 75.1
MsG0380017102.01.T01 AT3G54450 29.600 125 88 0 103 227 116 240 6.26e-14 73.2
MsG0380017102.01.T01 AT3G47960 28.571 161 110 1 64 224 146 301 1.09e-12 69.7

Find 67 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACTTGGTTTGTGCTTCT+TGG 0.185331 3:-91971938 MsG0380017102.01.T01:CDS
CTTACCACAGGAGCAATATT+TGG 0.237027 3:-91973199 MsG0380017102.01.T01:CDS
TTGGTGTTACATTCATTAAT+TGG 0.260739 3:-91973180 MsG0380017102.01.T01:CDS
CACTTAGTACAGCAATTTCT+TGG 0.276660 3:-91972115 MsG0380017102.01.T01:CDS
CTAATTAGAGGACTTCCTTT+TGG 0.282968 3:+91973049 None:intergenic
ACCTGTATGATTCTAATTAG+AGG 0.292803 3:+91973037 None:intergenic
GAAAGTTGAGCTGCTTCCTT+TGG 0.308304 3:+91973250 None:intergenic
TTGGATCTTTATCATCAAAT+TGG 0.315670 3:+91973269 None:intergenic
CCTAGTCTTCTTTGTACCCT+TGG 0.318512 3:+91974482 None:intergenic
CGCTTGTTCCTAATGCAAAA+AGG 0.337412 3:+91973326 None:intergenic
GCTATATCTTTGCAAGGAAT+TGG 0.342659 3:+91973418 None:intergenic
TTAAAAGGACTGATCAATTC+AGG 0.346244 3:-91972814 MsG0380017102.01.T01:intron
ACAGTTATGAAATCCTTAAA+AGG 0.349093 3:-91972829 MsG0380017102.01.T01:CDS
TCACATTGGTTCATATGAAT+TGG 0.352432 3:+91973394 None:intergenic
AAATGATGTTGACATGGTTA+AGG 0.368323 3:-91971874 MsG0380017102.01.T01:CDS
AAGGAATTGGTCTTAATTGT+TGG 0.385710 3:+91973431 None:intergenic
TCTTGGTGTTCTGTTGCATT+TGG 0.392399 3:-91972098 MsG0380017102.01.T01:CDS
ATCAATTCTTTCTATTTGCA+TGG 0.407028 3:-91973098 MsG0380017102.01.T01:CDS
CCAGGGAATCTGCAGAAGTA+TGG 0.408046 3:-91974513 MsG0380017102.01.T01:intron
AACTTCAAATCCGGAGAATA+CGG 0.420526 3:-91972888 MsG0380017102.01.T01:CDS
CTAGCAGAGACACCACAAAA+TGG 0.420951 3:-91975712 MsG0380017102.01.T01:CDS
AACCAATGTGAACCTGCTAA+TGG 0.439088 3:-91973382 MsG0380017102.01.T01:CDS
GCTGCTTGGCTTCCATTAGC+AGG 0.439732 3:+91973370 None:intergenic
ATCAAATTGGTCAGCTCCTA+AGG 0.441536 3:+91973282 None:intergenic
TTCTATGCAGAAAGTTCAGC+TGG 0.449535 3:-91972146 MsG0380017102.01.T01:intron
TGCATTTCTTCCGTATTCTC+CGG 0.455266 3:+91972878 None:intergenic
TACAGAAACAATACTCCAAA+AGG 0.460204 3:-91973064 MsG0380017102.01.T01:CDS
GGAAACGTGCTTGAACTGTT+AGG 0.460595 3:+91973452 None:intergenic
GAAACAGAAAACTTCAAATC+CGG 0.460969 3:-91972897 MsG0380017102.01.T01:CDS
CAAGCAGCTATACTTTATAC+AGG 0.461298 3:-91973355 MsG0380017102.01.T01:CDS
GTAGTAACCAAGGATGGTAT+TGG 0.475462 3:-91973153 MsG0380017102.01.T01:CDS
AAAGCAGCTTTACCCGCCTT+AGG 0.482169 3:-91973298 MsG0380017102.01.T01:CDS
TCCTCTAATTAGAATCATAC+AGG 0.495772 3:-91973038 MsG0380017102.01.T01:intron
TCAATTCTTTCTATTTGCAT+GGG 0.499333 3:-91973097 MsG0380017102.01.T01:CDS
TAAAACTCCAATACCATCCT+TGG 0.500711 3:+91973146 None:intergenic
CAAATATTGCTCCTGTGGTA+AGG 0.505900 3:+91973200 None:intergenic
TTCCATTAGCAGGTTCACAT+TGG 0.538946 3:+91973380 None:intergenic
CCAAGGGTACAAAGAAGACT+AGG 0.545747 3:-91974482 MsG0380017102.01.T01:CDS
TACATGCATGTACTGGTGCG+TGG 0.561686 3:+91975672 None:intergenic
CAAAGTGAGTGGTGGTTGGT+TGG 0.564096 3:-91972039 MsG0380017102.01.T01:CDS
GATCATGTACATGCATGTAC+TGG 0.574951 3:+91975665 None:intergenic
AAGTTATTAACTCACTGCAT+TGG 0.576873 3:+91974299 None:intergenic
TTCTTACTTAGCCTTACCAC+AGG 0.583254 3:-91973211 MsG0380017102.01.T01:CDS
TTAACAAAGTGAGTGGTGGT+TGG 0.583530 3:-91972043 MsG0380017102.01.T01:CDS
AATTGGTCAGCTCCTAAGGC+GGG 0.585024 3:+91973286 None:intergenic
TATGGAAGGGTTAGAGAACA+TGG 0.587825 3:-91974331 MsG0380017102.01.T01:CDS
CTGTATAAAGTATAGCTGCT+TGG 0.590146 3:+91973356 None:intergenic
TACAAGCACAGTGGTTGTTG+AGG 0.592321 3:-91972069 MsG0380017102.01.T01:CDS
ACATGCATGTACTGGTGCGT+GGG 0.594742 3:+91975673 None:intergenic
GGTGCGTGGGGCATGCGACA+TGG 0.595366 3:+91975686 None:intergenic
ATTGGTGCTATATCTTTGCA+AGG 0.603950 3:+91973412 None:intergenic
ATTTGATGATAAAGATCCAA+AGG 0.609608 3:-91973266 MsG0380017102.01.T01:CDS
GGATTAGTAGTAACCAAGGA+TGG 0.611883 3:-91973159 MsG0380017102.01.T01:CDS
AACACCAAATATTGCTCCTG+TGG 0.613994 3:+91973195 None:intergenic
TGATTTAAATGATGTTGACA+TGG 0.624317 3:-91971880 MsG0380017102.01.T01:CDS
AATTGGATTAGTAGTAACCA+AGG 0.634539 3:-91973163 MsG0380017102.01.T01:CDS
GAAGTATGGCTACACAACCA+AGG 0.645696 3:-91974499 MsG0380017102.01.T01:CDS
AAATTGGTCAGCTCCTAAGG+CGG 0.648583 3:+91973285 None:intergenic
AAGTATGGCTACACAACCAA+GGG 0.655982 3:-91974498 MsG0380017102.01.T01:CDS
CAACATCATTTAAATCACCT+AGG 0.666986 3:+91971886 None:intergenic
TTGGTATAGATACAAAACAG+TGG 0.674197 3:-91971919 MsG0380017102.01.T01:CDS
CATGCATGTACTGGTGCGTG+GGG 0.676555 3:+91975674 None:intergenic
AGGGTACAAAGAAGACTAGG+AGG 0.688134 3:-91974479 MsG0380017102.01.T01:CDS
GAGGTAGTTAACAAAGTGAG+TGG 0.707459 3:-91972050 MsG0380017102.01.T01:CDS
ACAGTGGAAGACAAACACCT+AGG 0.710549 3:-91971903 MsG0380017102.01.T01:CDS
GTAGTTAACAAAGTGAGTGG+TGG 0.723635 3:-91972047 MsG0380017102.01.T01:CDS
TGGTTACTTTACAAGCACAG+TGG 0.730755 3:-91972078 MsG0380017102.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGACATTATAAAAATAAATT+TGG + Chr3:91972731-91972750 None:intergenic 10.0%
!! TTTATCAAATAAAATTACAA+GGG - Chr3:91972275-91972294 MsG0380017102.01.T01:intron 10.0%
!!! AAAACATTTTTACATATAAA+AGG + Chr3:91973198-91973217 None:intergenic 10.0%
!!! TAATTTTTTGATAAAATAGA+GGG + Chr3:91972554-91972573 None:intergenic 10.0%
!!! TATTTTCAATTAACTAAAAT+TGG + Chr3:91972080-91972099 None:intergenic 10.0%
!!! TTAATTTTTTGATAAAATAG+AGG + Chr3:91972555-91972574 None:intergenic 10.0%
!! AAAATGTTATTGTACTTTAA+AGG - Chr3:91974611-91974630 MsG0380017102.01.T01:intron 15.0%
!! AATATTGTGCTTAATATTAT+TGG + Chr3:91975018-91975037 None:intergenic 15.0%
!! CTTTATCAAATAAAATTACA+AGG - Chr3:91972274-91972293 MsG0380017102.01.T01:intron 15.0%
!! TGTTTATAATGATTAATCAT+GGG + Chr3:91973843-91973862 None:intergenic 15.0%
!! TTAACTTATTATAGGTTATT+TGG - Chr3:91972968-91972987 MsG0380017102.01.T01:intron 15.0%
!! TTCAATTCTTAACTTATTAT+AGG - Chr3:91972960-91972979 MsG0380017102.01.T01:intron 15.0%
!! TTGTTTATAATGATTAATCA+TGG + Chr3:91973844-91973863 None:intergenic 15.0%
!! TTTCATTAATTCAAAAAATG+CGG + Chr3:91972130-91972149 None:intergenic 15.0%
!!! AACTAATTTTTTTAATTGCA+GGG - Chr3:91974107-91974126 MsG0380017102.01.T01:intron 15.0%
!!! TAAATTGAAATTCCAATTTT+TGG - Chr3:91973230-91973249 MsG0380017102.01.T01:CDS 15.0%
!! AATTGTGCTAAAAAACAAAT+TGG + Chr3:91972049-91972068 None:intergenic 20.0%
!! ACTAGAACAAATTAAGTTAA+TGG + Chr3:91972607-91972626 None:intergenic 20.0%
!! AGTTAATAACTTATTTCACT+GGG - Chr3:91973303-91973322 MsG0380017102.01.T01:CDS 20.0%
!! TAAAAAACAAATTGGAGTAT+AGG + Chr3:91972041-91972060 None:intergenic 20.0%
!! TGAAGATAGAATAAAAATGA+GGG + Chr3:91973677-91973696 None:intergenic 20.0%
!! TTTCTTATAATAGTGATTAG+AGG - Chr3:91972234-91972253 MsG0380017102.01.T01:intron 20.0%
!!! AACTTTCAAGCTTTTTTAAT+TGG - Chr3:91974357-91974376 MsG0380017102.01.T01:intron 20.0%
!!! AATTTGGTTACATTTTTGTA+AGG + Chr3:91972715-91972734 None:intergenic 20.0%
!!! ATTAAGTTAATGGTATTGAT+TGG + Chr3:91972597-91972616 None:intergenic 20.0%
!!! ATTTAATTTGTTGAACTTTC+AGG - Chr3:91974653-91974672 MsG0380017102.01.T01:intron 20.0%
!!! ATTTGGTTACATTTTTGTAA+GGG + Chr3:91972714-91972733 None:intergenic 20.0%
!!! ATTTGTTTTTTAGCACAATT+AGG - Chr3:91972049-91972068 MsG0380017102.01.T01:CDS 20.0%
!!! CAACTAATTTTTTTAATTGC+AGG - Chr3:91974106-91974125 MsG0380017102.01.T01:intron 20.0%
!!! CATTTTAATGTTCTTCAAAA+TGG - Chr3:91972919-91972938 MsG0380017102.01.T01:CDS 20.0%
!!! TAGTTCAAAAATTGTTACTT+TGG - Chr3:91972179-91972198 MsG0380017102.01.T01:intron 20.0%
!!! TGTAAACTTTGTATTTTACT+TGG - Chr3:91975639-91975658 MsG0380017102.01.T01:intron 20.0%
!!! TTAATATTATTGGTAGCATT+CGG + Chr3:91975008-91975027 None:intergenic 20.0%
!!! TTTGTTTTTTAGCACAATTA+GGG - Chr3:91972050-91972069 MsG0380017102.01.T01:CDS 20.0%
! ACAGTTATGAAATCCTTAAA+AGG - Chr3:91974762-91974781 MsG0380017102.01.T01:intron 25.0%
! ATCAATTCTTTCTATTTGCA+TGG - Chr3:91974493-91974512 MsG0380017102.01.T01:CDS 25.0%
! ATCTACCATATTATGTTCTA+TGG + Chr3:91975328-91975347 None:intergenic 25.0%
! ATGCATTCTGATTGATATAT+AGG + Chr3:91972397-91972416 None:intergenic 25.0%
! ATTCAAAACATGCACATTAT+AGG - Chr3:91972656-91972675 MsG0380017102.01.T01:intron 25.0%
! CCATGACTTATATAGATAAA+TGG + Chr3:91972803-91972822 None:intergenic 25.0%
! CCATTTATCTATATAAGTCA+TGG - Chr3:91972800-91972819 MsG0380017102.01.T01:intron 25.0%
! GAGTTAATAACTTATTTCAC+TGG - Chr3:91973302-91973321 MsG0380017102.01.T01:CDS 25.0%
! GTGAAGATAGAATAAAAATG+AGG + Chr3:91973678-91973697 None:intergenic 25.0%
! TAATTGAAGGTGAATGTTTA+AGG - Chr3:91973884-91973903 MsG0380017102.01.T01:intron 25.0%
! TCAATTCTTTCTATTTGCAT+GGG - Chr3:91974494-91974513 MsG0380017102.01.T01:CDS 25.0%
! TGATTTAAATGATGTTGACA+TGG - Chr3:91975711-91975730 MsG0380017102.01.T01:CDS 25.0%
! TGCATTCTGATTGATATATA+GGG + Chr3:91972396-91972415 None:intergenic 25.0%
! TTATAATAGTGATTAGAGGA+CGG - Chr3:91972238-91972257 MsG0380017102.01.T01:intron 25.0%
! TTCAAAACATGCACATTATA+GGG - Chr3:91972657-91972676 MsG0380017102.01.T01:intron 25.0%
! TTGAAGAACATTAAAATGTG+TGG + Chr3:91972917-91972936 None:intergenic 25.0%
! TTGGATCTTTATCATCAAAT+TGG + Chr3:91974325-91974344 None:intergenic 25.0%
! TTTAAAAAACTCATATGCGA+CGG + Chr3:91974070-91974089 None:intergenic 25.0%
! TTTCTGATACATATTTGTCT+AGG - Chr3:91973412-91973431 MsG0380017102.01.T01:CDS 25.0%
!! ATTGAATCATTTTCCTTAAC+TGG + Chr3:91972946-91972965 None:intergenic 25.0%
!! ATTTGATGATAAAGATCCAA+AGG - Chr3:91974325-91974344 MsG0380017102.01.T01:CDS 25.0%
!! TTGATTCTCAAATGTGTTTT+CGG + Chr3:91973562-91973581 None:intergenic 25.0%
!!! ACAAGCTTAACTACTTTTAT+TGG - Chr3:91975596-91975615 MsG0380017102.01.T01:intron 25.0%
!!! GGTTTTCAATATGCTATTTT+TGG - Chr3:91975382-91975401 MsG0380017102.01.T01:intron 25.0%
!!! TCGCATATGAGTTTTTTAAA+AGG - Chr3:91974070-91974089 MsG0380017102.01.T01:intron 25.0%
!!! TTGGTGTTACATTCATTAAT+TGG - Chr3:91974411-91974430 MsG0380017102.01.T01:intron 25.0%
!!! TTGTTTTTTAGCACAATTAG+GGG - Chr3:91972051-91972070 MsG0380017102.01.T01:CDS 25.0%
AAATGATGTTGACATGGTTA+AGG - Chr3:91975717-91975736 MsG0380017102.01.T01:CDS 30.0%
AACAACCTAACCAACTTAAT+GGG - Chr3:91973355-91973374 MsG0380017102.01.T01:CDS 30.0%
AACATAGTAGTTCAAACATG+GGG - Chr3:91972521-91972540 MsG0380017102.01.T01:intron 30.0%
AAGTTATTAACTCACTGCAT+TGG + Chr3:91973295-91973314 None:intergenic 30.0%
ACATATAAAAGGACACACAT+GGG + Chr3:91973187-91973206 None:intergenic 30.0%
ACCAAAAAACACATTGGTAA+AGG + Chr3:91975360-91975379 None:intergenic 30.0%
ACCTGTATGATTCTAATTAG+AGG + Chr3:91974557-91974576 None:intergenic 30.0%
AGGAGGAAAAAAAGAAACAT+AGG - Chr3:91972686-91972705 MsG0380017102.01.T01:intron 30.0%
ATCAAAGAAGACACTAACAA+TGG - Chr3:91972869-91972888 MsG0380017102.01.T01:CDS 30.0%
ATCCAATTCCAATTCTTTGA+AGG + Chr3:91975242-91975261 None:intergenic 30.0%
ATGAACAATAGAGGATTACT+GGG + Chr3:91975141-91975160 None:intergenic 30.0%
ATTCTGATTGATATATAGGG+TGG + Chr3:91972393-91972412 None:intergenic 30.0%
CAACATCATTTAAATCACCT+AGG + Chr3:91975708-91975727 None:intergenic 30.0%
CATTCACCTTCAATTATTGA+AGG + Chr3:91973880-91973899 None:intergenic 30.0%
GAAACAGAAAACTTCAAATC+CGG - Chr3:91974694-91974713 MsG0380017102.01.T01:intron 30.0%
GAACATAGTAGTTCAAACAT+GGG - Chr3:91972520-91972539 MsG0380017102.01.T01:intron 30.0%
TACAGAAACAATACTCCAAA+AGG - Chr3:91974527-91974546 MsG0380017102.01.T01:intron 30.0%
TACATATAAAAGGACACACA+TGG + Chr3:91973188-91973207 None:intergenic 30.0%
TATCAGAAATTAATCCACCT+AGG + Chr3:91973401-91973420 None:intergenic 30.0%
TATGGTAAGAACTTGAAACT+TGG - Chr3:91973156-91973175 MsG0380017102.01.T01:CDS 30.0%
TCAAAACATGCACATTATAG+GGG - Chr3:91972658-91972677 MsG0380017102.01.T01:intron 30.0%
TCAAAGAATTGGAATTGGAT+TGG - Chr3:91975242-91975261 MsG0380017102.01.T01:intron 30.0%
TCCTCTAATTAGAATCATAC+AGG - Chr3:91974553-91974572 MsG0380017102.01.T01:intron 30.0%
TGAACATAGTAGTTCAAACA+TGG - Chr3:91972519-91972538 MsG0380017102.01.T01:intron 30.0%
TGAAGCATGTAGAAAAAATG+AGG + Chr3:91974592-91974611 None:intergenic 30.0%
TGATTGAGTGTGAAATAGTT+TGG + Chr3:91971997-91972016 None:intergenic 30.0%
TGTAGCCATAGAACATAATA+TGG - Chr3:91975320-91975339 MsG0380017102.01.T01:intron 30.0%
TTAAAAGGACTGATCAATTC+AGG - Chr3:91974777-91974796 MsG0380017102.01.T01:intron 30.0%
TTATGTGTGTATATGTCATC+CGG - Chr3:91972342-91972361 MsG0380017102.01.T01:intron 30.0%
TTGGTATAGATACAAAACAG+TGG - Chr3:91975672-91975691 MsG0380017102.01.T01:intron 30.0%
! AATTCTCTCAAGTTTTTGTC+CGG + Chr3:91972364-91972383 None:intergenic 30.0%
! AGTGTTCTAAGCAGATAATT+CGG + Chr3:91973036-91973055 None:intergenic 30.0%
! TGAATTGATCAGTCCTTTTA+AGG + Chr3:91974778-91974797 None:intergenic 30.0%
! TTCCTAATGCAAAAAGGTAT+AGG + Chr3:91974262-91974281 None:intergenic 30.0%
! TTTTGTTAAGCTGAAGTTCA+TGG + Chr3:91973330-91973349 None:intergenic 30.0%
!! AAGGAATTGGTCTTAATTGT+TGG + Chr3:91974163-91974182 None:intergenic 30.0%
!! AATTGGATTAGTAGTAACCA+AGG - Chr3:91974428-91974447 MsG0380017102.01.T01:intron 30.0%
!! TCACATTGGTTCATATGAAT+TGG + Chr3:91974200-91974219 None:intergenic 30.0%
!!! TACCAATGTGTTTTTTGGTT+GGG - Chr3:91975361-91975380 MsG0380017102.01.T01:intron 30.0%
!!! TTACCAATGTGTTTTTTGGT+TGG - Chr3:91975360-91975379 MsG0380017102.01.T01:intron 30.0%
!!! TTGAAGTTTTCTGTTTCTGA+AGG + Chr3:91974691-91974710 None:intergenic 30.0%
AAAAGCAGTTCCCATTAAGT+TGG + Chr3:91973368-91973387 None:intergenic 35.0%
AACCCAACCAAAAAACACAT+TGG + Chr3:91975366-91975385 None:intergenic 35.0%
AACTTCAAATCCGGAGAATA+CGG - Chr3:91974703-91974722 MsG0380017102.01.T01:intron 35.0%
ACAAAACTGATTGCAAATGC+CGG - Chr3:91972453-91972472 MsG0380017102.01.T01:intron 35.0%
ACTTGTTTGATTACTTGCCA+GGG - Chr3:91973061-91973080 MsG0380017102.01.T01:CDS 35.0%
AGGACAAACATGAACAATAG+AGG + Chr3:91975150-91975169 None:intergenic 35.0%
ATCAGACACCTTCAAAGAAT+TGG - Chr3:91975231-91975250 MsG0380017102.01.T01:intron 35.0%
CAACAACCTAACCAACTTAA+TGG - Chr3:91973354-91973373 MsG0380017102.01.T01:CDS 35.0%
CAAGCAGCTATACTTTATAC+AGG - Chr3:91974236-91974255 MsG0380017102.01.T01:intron 35.0%
CACCTTCAAAGAATTGGAAT+TGG - Chr3:91975237-91975256 MsG0380017102.01.T01:intron 35.0%
CACTTAGTACAGCAATTTCT+TGG - Chr3:91975476-91975495 MsG0380017102.01.T01:intron 35.0%
CATGAACAATAGAGGATTAC+TGG + Chr3:91975142-91975161 None:intergenic 35.0%
CGGTTGTAAAATAATCGCTA+TGG + Chr3:91974050-91974069 None:intergenic 35.0%
CTATCTTCACTTGCATTTCA+CGG - Chr3:91973688-91973707 MsG0380017102.01.T01:intron 35.0%
CTGTATAAAGTATAGCTGCT+TGG + Chr3:91974238-91974257 None:intergenic 35.0%
GAGATCCATGAAAAAGAAAG+AGG - Chr3:91974737-91974756 MsG0380017102.01.T01:intron 35.0%
GCAGACATGTTTACACTTAT+TGG - Chr3:91975409-91975428 MsG0380017102.01.T01:intron 35.0%
GCTATATCAATGTTAGTTGC+TGG - Chr3:91975273-91975292 MsG0380017102.01.T01:intron 35.0%
GCTATATCTTTGCAAGGAAT+TGG + Chr3:91974176-91974195 None:intergenic 35.0%
TAAAACTCCAATACCATCCT+TGG + Chr3:91974448-91974467 None:intergenic 35.0%
TAGTGTCTTCTTTGATCTGA+AGG + Chr3:91972865-91972884 None:intergenic 35.0%
TCCTAAAAGATCGTTACAAG+TGG + Chr3:91972308-91972327 None:intergenic 35.0%
TCTTCAAAATGGACCAGTTA+AGG - Chr3:91972930-91972949 MsG0380017102.01.T01:intron 35.0%
TGAGAGCCTTCAATAATTGA+AGG - Chr3:91973871-91973890 MsG0380017102.01.T01:intron 35.0%
TTCTAAGCAGATAATTCGGT+TGG + Chr3:91973032-91973051 None:intergenic 35.0%
! AACTTGTTTGATTACTTGCC+AGG - Chr3:91973060-91973079 MsG0380017102.01.T01:CDS 35.0%
! AAGAGCTGCACTTTTGTATA+TGG - Chr3:91973138-91973157 MsG0380017102.01.T01:CDS 35.0%
! CTAATTAGAGGACTTCCTTT+TGG + Chr3:91974545-91974564 None:intergenic 35.0%
! CTTTTTGCATTAGGAACAAG+CGG - Chr3:91974266-91974285 MsG0380017102.01.T01:intron 35.0%
! TCCACTTGTAACGATCTTTT+AGG - Chr3:91972304-91972323 MsG0380017102.01.T01:intron 35.0%
! TTTTTAATACCACTCCTAGG+TGG - Chr3:91973384-91973403 MsG0380017102.01.T01:CDS 35.0%
!! ATTGGTGCTATATCTTTGCA+AGG + Chr3:91974182-91974201 None:intergenic 35.0%
!! TATAGGTTATTTGGTGTCAC+TGG - Chr3:91972977-91972996 MsG0380017102.01.T01:intron 35.0%
!! TGCTTTTTAATACCACTCCT+AGG - Chr3:91973381-91973400 MsG0380017102.01.T01:CDS 35.0%
!! TGTCTCCTCTTTCTTTTTCA+TGG + Chr3:91974745-91974764 None:intergenic 35.0%
!! TTTACTTGGTTTGTGCTTCT+TGG - Chr3:91975653-91975672 MsG0380017102.01.T01:intron 35.0%
!!! GCCTTTACCAATGTGTTTTT+TGG - Chr3:91975356-91975375 MsG0380017102.01.T01:intron 35.0%
AAACATGCACATTATAGGGG+CGG - Chr3:91972661-91972680 MsG0380017102.01.T01:intron 40.0%
AACAATAGAGGATTACTGGG+AGG + Chr3:91975138-91975157 None:intergenic 40.0%
AACACCAAATATTGCTCCTG+TGG + Chr3:91974399-91974418 None:intergenic 40.0%
AACCAATGTGAACCTGCTAA+TGG - Chr3:91974209-91974228 MsG0380017102.01.T01:intron 40.0%
AACTCGGTCGTATAGGAATT+AGG + Chr3:91975170-91975189 None:intergenic 40.0%
AAGTATGGCTACACAACCAA+GGG - Chr3:91973093-91973112 MsG0380017102.01.T01:CDS 40.0%
ACAATAGAGGATTACTGGGA+GGG + Chr3:91975137-91975156 None:intergenic 40.0%
ACCTTGGACACAAAACATCT+TGG - Chr3:91975090-91975109 MsG0380017102.01.T01:intron 40.0%
AGATTCTTAGATAGAGCAGC+AGG - Chr3:91974912-91974931 MsG0380017102.01.T01:intron 40.0%
ATCAAATTGGTCAGCTCCTA+AGG + Chr3:91974312-91974331 None:intergenic 40.0%
ATCTTGGGATTCAAAATGCC+AGG - Chr3:91975106-91975125 MsG0380017102.01.T01:intron 40.0%
CAAATATTGCTCCTGTGGTA+AGG + Chr3:91974394-91974413 None:intergenic 40.0%
CATACAACAAAGCACAACCT+TGG - Chr3:91975074-91975093 MsG0380017102.01.T01:intron 40.0%
CCATAGCTGCATCCAAAAAT+TGG + Chr3:91973245-91973264 None:intergenic 40.0%
CCTGTGATTCTTCGAATAAG+CGG + Chr3:91975198-91975217 None:intergenic 40.0%
CCTTGGACACAAAACATCTT+GGG - Chr3:91975091-91975110 MsG0380017102.01.T01:intron 40.0%
CGAATAAGCGGACAAAAACT+CGG + Chr3:91975186-91975205 None:intergenic 40.0%
CGCTTGTTCCTAATGCAAAA+AGG + Chr3:91974268-91974287 None:intergenic 40.0%
CTAATGACATTCATTGCTGC+CGG + Chr3:91972475-91972494 None:intergenic 40.0%
CTCCTACATTACCAACCATA+GGG + Chr3:91973734-91973753 None:intergenic 40.0%
CTTACCACAGGAGCAATATT+TGG - Chr3:91974392-91974411 MsG0380017102.01.T01:intron 40.0%
GAAATTAATCCACCTAGGAG+TGG + Chr3:91973396-91973415 None:intergenic 40.0%
GAGGTAGTTAACAAAGTGAG+TGG - Chr3:91975541-91975560 MsG0380017102.01.T01:intron 40.0%
GATCATGTACATGCATGTAC+TGG + Chr3:91971929-91971948 None:intergenic 40.0%
GATTGTACTAAGGAGCTGAA+TGG + Chr3:91971970-91971989 None:intergenic 40.0%
GTAGTAACCAAGGATGGTAT+TGG - Chr3:91974438-91974457 MsG0380017102.01.T01:intron 40.0%
GTAGTTAACAAAGTGAGTGG+TGG - Chr3:91975544-91975563 MsG0380017102.01.T01:intron 40.0%
GTTTGCATGCATGGAATTGT+TGG - Chr3:91973451-91973470 MsG0380017102.01.T01:CDS 40.0%
TAGTTCAAACATGGGGTCTA+TGG - Chr3:91972528-91972547 MsG0380017102.01.T01:intron 40.0%
TATGGAAGGGTTAGAGAACA+TGG - Chr3:91973260-91973279 MsG0380017102.01.T01:CDS 40.0%
TGCATTTCTTCCGTATTCTC+CGG + Chr3:91974716-91974735 None:intergenic 40.0%
TTAACAAAGTGAGTGGTGGT+TGG - Chr3:91975548-91975567 MsG0380017102.01.T01:intron 40.0%
TTCCATTAGCAGGTTCACAT+TGG + Chr3:91974214-91974233 None:intergenic 40.0%
TTCTATGCAGAAAGTTCAGC+TGG - Chr3:91975445-91975464 MsG0380017102.01.T01:intron 40.0%
! GGATTAGTAGTAACCAAGGA+TGG - Chr3:91974432-91974451 MsG0380017102.01.T01:intron 40.0%
! GGCCTATACCTTTTTGCATT+AGG - Chr3:91974257-91974276 MsG0380017102.01.T01:intron 40.0%
! TGGTTACTTTACAAGCACAG+TGG - Chr3:91975513-91975532 MsG0380017102.01.T01:intron 40.0%
! TTATTGGTAGCATTCGGACT+AGG + Chr3:91975002-91975021 None:intergenic 40.0%
! TTTTGGATGCAGCTATGGAA+GGG - Chr3:91973247-91973266 MsG0380017102.01.T01:CDS 40.0%
! TTTTTGGATGCAGCTATGGA+AGG - Chr3:91973246-91973265 MsG0380017102.01.T01:CDS 40.0%
!! CAGTTCCCATTAAGTTGGTT+AGG + Chr3:91973363-91973382 None:intergenic 40.0%
!! CCAATTTTTGGATGCAGCTA+TGG - Chr3:91973242-91973261 MsG0380017102.01.T01:CDS 40.0%
!! GTTTGGTGCTGATTGTACTA+AGG + Chr3:91971980-91971999 None:intergenic 40.0%
!! TCTTGGTGTTCTGTTGCATT+TGG - Chr3:91975493-91975512 MsG0380017102.01.T01:intron 40.0%
!! TCTTTGAAGGTGTCTGATTC+CGG + Chr3:91975229-91975248 None:intergenic 40.0%
!! TTCTTACTTAGCCTTACCAC+AGG - Chr3:91974380-91974399 MsG0380017102.01.T01:intron 40.0%
AAATTGGTCAGCTCCTAAGG+CGG + Chr3:91974309-91974328 None:intergenic 45.0%
AACATGCACATTATAGGGGC+GGG - Chr3:91972662-91972681 MsG0380017102.01.T01:intron 45.0%
ACAGTGGAAGACAAACACCT+AGG - Chr3:91975688-91975707 MsG0380017102.01.T01:CDS 45.0%
AGAATCACAGGAATCCCAAC+CGG - Chr3:91975207-91975226 MsG0380017102.01.T01:intron 45.0%
AGATAAATGGCCGCAAGTTG+TGG + Chr3:91972790-91972809 None:intergenic 45.0%
AGGGTACAAAGAAGACTAGG+AGG - Chr3:91973112-91973131 MsG0380017102.01.T01:CDS 45.0%
CCGCTTATTCGAAGAATCAC+AGG - Chr3:91975195-91975214 MsG0380017102.01.T01:intron 45.0%
CGGCAGCAATGAATGTCATT+AGG - Chr3:91972473-91972492 MsG0380017102.01.T01:intron 45.0%
CTAGCAGAGACACCACAAAA+TGG - Chr3:91971879-91971898 MsG0380017102.01.T01:CDS 45.0%
CTTGTGTTCGTTTGCATGCA+TGG - Chr3:91973442-91973461 MsG0380017102.01.T01:CDS 45.0%
GAAAGTTGAGCTGCTTCCTT+TGG + Chr3:91974344-91974363 None:intergenic 45.0%
GAAGTATGGCTACACAACCA+AGG - Chr3:91973092-91973111 MsG0380017102.01.T01:CDS 45.0%
GAGGAAACAGTACAGGATCA+TGG - Chr3:91974938-91974957 MsG0380017102.01.T01:intron 45.0%
GCTACTTCATCCACAACTTG+CGG - Chr3:91972777-91972796 MsG0380017102.01.T01:intron 45.0%
GCTCCTACATTACCAACCAT+AGG + Chr3:91973735-91973754 None:intergenic 45.0%
GGAAACGTGCTTGAACTGTT+AGG + Chr3:91974142-91974161 None:intergenic 45.0%
GGACAAAAACTCGGTCGTAT+AGG + Chr3:91975177-91975196 None:intergenic 45.0%
GTACTAAGGAGCTGAATGGT+TGG + Chr3:91971966-91971985 None:intergenic 45.0%
GTACTTTCAGCATCATGACG+TGG - Chr3:91973812-91973831 MsG0380017102.01.T01:intron 45.0%
TACAAGCACAGTGGTTGTTG+AGG - Chr3:91975522-91975541 MsG0380017102.01.T01:intron 45.0%
TCTTAGATAGAGCAGCAGGT+TGG - Chr3:91974916-91974935 MsG0380017102.01.T01:intron 45.0%
TTGCATTTCACGGTACAGCA+AGG - Chr3:91973698-91973717 MsG0380017102.01.T01:intron 45.0%
! CCAAGGGTACAAAGAAGACT+AGG - Chr3:91973109-91973128 MsG0380017102.01.T01:CDS 45.0%
! CCCAAGATGTTTTGTGTCCA+AGG + Chr3:91975094-91975113 None:intergenic 45.0%
! CCTAGTCTTCTTTGTACCCT+TGG + Chr3:91973112-91973131 None:intergenic 45.0%
!! GGTTGGTAATGTAGGAGCTA+GGG - Chr3:91973737-91973756 MsG0380017102.01.T01:intron 45.0%
!! TGGTTGGTAATGTAGGAGCT+AGG - Chr3:91973736-91973755 MsG0380017102.01.T01:intron 45.0%
AAAGCAGCTTTACCCGCCTT+AGG - Chr3:91974293-91974312 MsG0380017102.01.T01:intron 50.0%
AATTGGTCAGCTCCTAAGGC+GGG + Chr3:91974308-91974327 None:intergenic 50.0%
ACATGCACATTATAGGGGCG+GGG - Chr3:91972663-91972682 MsG0380017102.01.T01:intron 50.0%
ACGGTACAGCAAGGTGAAGA+GGG - Chr3:91973707-91973726 MsG0380017102.01.T01:intron 50.0%
ATAGAGGATTACTGGGAGGG+AGG + Chr3:91975134-91975153 None:intergenic 50.0%
CAAAGTGAGTGGTGGTTGGT+TGG - Chr3:91975552-91975571 MsG0380017102.01.T01:intron 50.0%
CCAGGGAATCTGCAGAAGTA+TGG - Chr3:91973078-91973097 MsG0380017102.01.T01:CDS 50.0%
CCATACTTCTGCAGATTCCC+TGG + Chr3:91973081-91973100 None:intergenic 50.0%
CTAAGGAGCTGAATGGTTGG+TGG + Chr3:91971963-91971982 None:intergenic 50.0%
TAGAGGATTACTGGGAGGGA+GGG + Chr3:91975133-91975152 None:intergenic 50.0%
! ACATGCATGTACTGGTGCGT+GGG + Chr3:91971921-91971940 None:intergenic 50.0%
! CAGGTTGGAGGAAACAGTAC+AGG - Chr3:91974931-91974950 MsG0380017102.01.T01:intron 50.0%
! GCGACATGGTCTCCATTTTG+TGG + Chr3:91971894-91971913 None:intergenic 50.0%
! TACATGCATGTACTGGTGCG+TGG + Chr3:91971922-91971941 None:intergenic 50.0%
! TAGATAGAGCAGCAGGTTGG+AGG - Chr3:91974919-91974938 MsG0380017102.01.T01:intron 50.0%
!! GAAGGTGTCTGATTCCGGTT+GGG + Chr3:91975224-91975243 None:intergenic 50.0%
!! GGCCCTATGGTTGGTAATGT+AGG - Chr3:91973729-91973748 MsG0380017102.01.T01:intron 50.0%
!! TGAAGGTGTCTGATTCCGGT+TGG + Chr3:91975225-91975244 None:intergenic 50.0%
CACGGTACAGCAAGGTGAAG+AGG - Chr3:91973706-91973725 MsG0380017102.01.T01:intron 55.0%
CGGTACAGCAAGGTGAAGAG+GGG - Chr3:91973708-91973727 MsG0380017102.01.T01:intron 55.0%
GCTGCTTGGCTTCCATTAGC+AGG + Chr3:91974224-91974243 None:intergenic 55.0%
! CATGCATGTACTGGTGCGTG+GGG + Chr3:91971920-91971939 None:intergenic 55.0%
ACATTATAGGGGCGGGGAGG+AGG - Chr3:91972669-91972688 MsG0380017102.01.T01:intron 60.0%
ATTACTGGGAGGGAGGGTCC+TGG + Chr3:91975127-91975146 None:intergenic 60.0%
CAAGGTGAAGAGGGGCCCTA+TGG - Chr3:91973716-91973735 MsG0380017102.01.T01:intron 60.0%
GTGAAGAGGGGCCCTATGGT+TGG - Chr3:91973720-91973739 MsG0380017102.01.T01:intron 60.0%
TGCACATTATAGGGGCGGGG+AGG - Chr3:91972666-91972685 MsG0380017102.01.T01:intron 60.0%
GGTGCGTGGGGCATGCGACA+TGG + Chr3:91971908-91971927 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 91971869 91975744 91971869 ID=MsG0380017102.01;Name=MsG0380017102.01
Chr3 mRNA 91971869 91975744 91971869 ID=MsG0380017102.01.T01;Parent=MsG0380017102.01;Name=MsG0380017102.01.T01;_AED=0.30;_eAED=0.35;_QI=0|0|0|0.83|1|1|6|0|349
Chr3 exon 91975675 91975744 91975675 ID=MsG0380017102.01.T01:exon:25287;Parent=MsG0380017102.01.T01
Chr3 exon 91974454 91974531 91974454 ID=MsG0380017102.01.T01:exon:25286;Parent=MsG0380017102.01.T01
Chr3 exon 91974314 91974354 91974314 ID=MsG0380017102.01.T01:exon:25285;Parent=MsG0380017102.01.T01
Chr3 exon 91973039 91973485 91973039 ID=MsG0380017102.01.T01:exon:25284;Parent=MsG0380017102.01.T01
Chr3 exon 91972815 91972938 91972815 ID=MsG0380017102.01.T01:exon:25283;Parent=MsG0380017102.01.T01
Chr3 exon 91971869 91972158 91971869 ID=MsG0380017102.01.T01:exon:25282;Parent=MsG0380017102.01.T01
Chr3 CDS 91975675 91975744 91975675 ID=MsG0380017102.01.T01:cds;Parent=MsG0380017102.01.T01
Chr3 CDS 91974454 91974531 91974454 ID=MsG0380017102.01.T01:cds;Parent=MsG0380017102.01.T01
Chr3 CDS 91974314 91974354 91974314 ID=MsG0380017102.01.T01:cds;Parent=MsG0380017102.01.T01
Chr3 CDS 91973039 91973485 91973039 ID=MsG0380017102.01.T01:cds;Parent=MsG0380017102.01.T01
Chr3 CDS 91972815 91972938 91972815 ID=MsG0380017102.01.T01:cds;Parent=MsG0380017102.01.T01
Chr3 CDS 91971869 91972158 91971869 ID=MsG0380017102.01.T01:cds;Parent=MsG0380017102.01.T01
Gene Sequence

>MsG0380017102.01.T01

ATGATTGCAGCTAGCAGAGACACCACAAAATGGAGACCATGTCGCATGCCCCACGCACCAGTACATGCATGGAATCTGCAGAAGTATGGCTACACAACCAAGGGTACAAAGAAGACTAGGAGGAAAAAGAGCTGCACTTTTGTATATGCTATGGAAGGGTTAGAGAACATGGCTTTTGTTGCCAATGCAGGATATAGTATCCTAACAGTTCAAGCACGTTTCCAACAATTAAGACCAATTCCTTGCAAAGATATAGCACCAATTCATATGAACCAATGTGAACCTGCTAATGGAAGCCAAGCAGCTATACTTTATACAGGCCTATACCTTTTTGCATTAGGAACAAGCGGTGTTAAAGCAGCTTTACCCGCCTTAGGAGCTGACCAATTTGATGATAAAGATCCAAAGGAAGCAGCTCAACTTTCAAGCTTTTTTAATTGGTTCTTACTTAGCCTTACCACAGGAGCAATATTTGGTGTTACATTCATTAATTGGATTAGTAGTAACCAAGGATGGTATTGGAGTTTTACTGTATGCACTATAGCAGTCTTTCTATCAATTCTTTCTATTTGCATGGGCAAGTCATTCTACAGAAACAATACTCCAAAAGGAAGTCCTCTAATTAGAATCATACAGGTGTTTGTAGCAGCCTTCAGAAACAGAAAACTTCAAATCCGGAGAATACGGAAGAAATGCATGAGATCCATGAAAAAGAAAGAGGAGACAGTTATGAAATCCTTAAAAGGACTGATCAATTCAGAAAGTTCAGCTGGAATGAAGTCACTTAGTACAGCAATTTCTTGGTGTTCTGTTGCATTTGGTTACTTTACAAGCACAGTGGTTGTTGAGGTAGTTAACAAAGTGAGTGGTGGTTGGTTGGCTAGTAATAACTTGAATAGAGACAAGCTTAACTACTTTTATTGGCTATTGTCAATCATAAGTGTTGTAAACTTTGTATTTTACTTGGTTTGTGCTTCTTGGTATAGATACAAAACAGTGGAAGACAAACACCTAGGTGATTTAAATGATGTTGACATGGTTAAGGTTTAA

Protein sequence

>MsG0380017102.01.T01

MIAASRDTTKWRPCRMPHAPVHAWNLQKYGYTTKGTKKTRRKKSCTFVYAMEGLENMAFVANAGYSILTVQARFQQLRPIPCKDIAPIHMNQCEPANGSQAAILYTGLYLFALGTSGVKAALPALGADQFDDKDPKEAAQLSSFFNWFLLSLTTGAIFGVTFINWISSNQGWYWSFTVCTIAVFLSILSICMGKSFYRNNTPKGSPLIRIIQVFVAAFRNRKLQIRRIRKKCMRSMKKKEETVMKSLKGLINSESSAGMKSLSTAISWCSVAFGYFTSTVVVEVVNKVSGGWLASNNLNRDKLNYFYWLLSIISVVNFVFYLVCASWYRYKTVEDKHLGDLNDVDMVKV*