AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040688.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040688.01.T01 MTR_7g096020 99.471 378 2 0 5 382 227 604 0.0 776
MsG0780040688.01.T01 MTR_1g070940 74.292 424 105 2 5 425 174 596 0.0 674
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040688.01.T01 AT2G38840 75.000 416 104 0 5 420 21 436 0.0 683
MsG0780040688.01.T01 AT2G38840 75.000 416 104 0 5 420 179 594 0.0 682

Find 112 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGGATTCATTGGCTATTA+TGG 0.116641 7:+81236378 MsG0780040688.01.T01:CDS
TGATACTGACTATCTTTATT+AGG 0.166330 7:-81236156 None:intergenic
GTACAAGGAAAATCTCTAAA+TGG 0.236462 7:+81236690 MsG0780040688.01.T01:CDS
GCATTCGATCAGCAACATTT+TGG 0.262273 7:+81237522 MsG0780040688.01.T01:CDS
CGGGATTCATTGGCTATTAT+GGG 0.286021 7:+81236379 MsG0780040688.01.T01:CDS
ATTCTATATTGGCGGTGTTA+TGG 0.294127 7:+81239427 MsG0780040688.01.T01:CDS
GATACTGACTATCTTTATTA+GGG 0.305401 7:-81236155 None:intergenic
TTCTATATTGGCGGTGTTAT+GGG 0.307055 7:+81239428 MsG0780040688.01.T01:CDS
ATCATCAGATCAATCAAATT+CGG 0.317922 7:+81236359 MsG0780040688.01.T01:intron
TCATCACTCCGATATTCCTT+TGG 0.339042 7:+81239555 MsG0780040688.01.T01:three_prime_UTR
AGACCTACACAAGGTTGTTT+TGG 0.349932 7:+81238622 MsG0780040688.01.T01:CDS
CAATCAAATTCGGGATTCAT+TGG 0.355291 7:+81236369 MsG0780040688.01.T01:CDS
GTCTAAGTCTCTATTTATAA+AGG 0.366560 7:+81238476 MsG0780040688.01.T01:CDS
CACTTTACTACAATCCAGTT+TGG 0.373270 7:+81238655 MsG0780040688.01.T01:CDS
CATCACTCCGATATTCCTTT+GGG 0.374851 7:+81239556 MsG0780040688.01.T01:three_prime_UTR
ATCCATCATATGTGAAGAAA+AGG 0.375973 7:+81236622 MsG0780040688.01.T01:CDS
TGGAATCTCTCCCTTGTTCA+AGG 0.380178 7:-81237349 None:intergenic
AGTTCTCAAGCTTCCTTCAA+TGG 0.384884 7:+81238213 MsG0780040688.01.T01:CDS
GAAGCTTGAAGATATCCTTC+TGG 0.396937 7:-81237468 None:intergenic
ACTGTAAAGTAATAATTCAT+TGG 0.414181 7:-81239735 None:intergenic
GCAACTATAAAATGCCAAAC+TGG 0.427089 7:-81238669 None:intergenic
TCCACAAGAGAACCTGTTGA+TGG 0.427990 7:-81237369 None:intergenic
TTTCTCCCTCGTCACGGTTG+TGG 0.429616 7:+81238533 MsG0780040688.01.T01:CDS
TACAAGGAAAATCTCTAAAT+GGG 0.432658 7:+81236691 MsG0780040688.01.T01:CDS
TCATCAGATCAATCAAATTC+GGG 0.435878 7:+81236360 MsG0780040688.01.T01:intron
AAATGAACTTTATAATAAAC+CGG 0.436465 7:-81238560 None:intergenic
TATCGGAGTGATGAACAAAA+TGG 0.438346 7:-81239546 None:intergenic
TTGAACCTGCCAAGCTCTTG+TGG 0.441248 7:+81235917 MsG0780040688.01.T01:CDS
GACAAAGCTTTGTGACTTGA+AGG 0.448277 7:+81236587 MsG0780040688.01.T01:CDS
AGGAGACAGAAATATTGATA+TGG 0.448597 7:+81236253 MsG0780040688.01.T01:intron
TCGTCACGGTTGTGGTTGGC+CGG 0.460211 7:+81238541 MsG0780040688.01.T01:CDS
TGTGTGCTTGCAACAGAACT+AGG 0.461742 7:-81239624 None:intergenic
AAGCTCGCCCAAAGGAATAT+CGG 0.466643 7:-81239563 None:intergenic
GTTTGTTTCCTTCCTGAAGC+AGG 0.468484 7:+81236719 MsG0780040688.01.T01:CDS
ATAAGCCACAAGAGCTTGGC+AGG 0.474426 7:-81235922 None:intergenic
AGTCACAAAGCTTTGTCCGC+TGG 0.480181 7:-81236581 None:intergenic
AAGGGAGAGATTCCATCAAC+AGG 0.484642 7:+81237357 MsG0780040688.01.T01:CDS
GTCCATCATGTCCTCACAAT+CGG 0.491019 7:-81238182 None:intergenic
TTACTTACCTGTCAAGATCA+AGG 0.494526 7:-81238722 None:intergenic
AAAACTTATGATGATTCAGT+TGG 0.497813 7:+81239521 MsG0780040688.01.T01:exon
TAAGAAGTCAGTCACGCAAC+TGG 0.499993 7:+81237557 MsG0780040688.01.T01:CDS
TCCCTCGTCACGGTTGTGGT+TGG 0.503251 7:+81238537 MsG0780040688.01.T01:CDS
TAAGTTATACAGTGAAAAGA+TGG 0.504761 7:+81237425 MsG0780040688.01.T01:CDS
CATCTCCCACACAGCTTCTG+TGG 0.505192 7:+81239676 MsG0780040688.01.T01:three_prime_UTR
GCCCAGTCCTTGATCTTGAC+AGG 0.508041 7:+81238715 MsG0780040688.01.T01:CDS
ATACTTGAAGCCTTGAACAA+GGG 0.513345 7:+81237339 MsG0780040688.01.T01:CDS
TGAAGATATCCTTCTGGAAG+AGG 0.514011 7:-81237462 None:intergenic
AGCTTTGTGACTTGAAGGAT+GGG 0.521130 7:+81236592 MsG0780040688.01.T01:CDS
AAGCTTTGTGACTTGAAGGA+TGG 0.521331 7:+81236591 MsG0780040688.01.T01:CDS
CAAGCACACAAAGTGTCAAA+TGG 0.522477 7:+81239637 MsG0780040688.01.T01:three_prime_UTR
TGCAGATGGGCTATCCCACT+TGG 0.526646 7:+81239385 MsG0780040688.01.T01:intron
AGGGAAATCAGTGCAACAAA+TGG 0.528159 7:+81236110 MsG0780040688.01.T01:CDS
TCAATGGCAAAATTTAATGC+AGG 0.530565 7:+81238229 MsG0780040688.01.T01:CDS
GGTGGCTTTCTCCCTCGTCA+CGG 0.533465 7:+81238527 MsG0780040688.01.T01:CDS
AGCAAACTACGAGGGACGTA+TGG 0.536139 7:+81238303 MsG0780040688.01.T01:CDS
CGTCACCTCTAGCCATGTCA+TGG 0.537341 7:-81237491 None:intergenic
CAGGTTCAAATGCAACATCC+TGG 0.541309 7:-81235903 None:intergenic
GATACTTGAAGCCTTGAACA+AGG 0.544169 7:+81237338 MsG0780040688.01.T01:intron
TTGGATAAGCCACAAGAGCT+TGG 0.550397 7:-81235926 None:intergenic
AGCTTTGTCCGCTGGAGATG+TGG 0.557191 7:-81236573 None:intergenic
ATCCGTCCAAAGATTGTACA+AGG 0.558214 7:+81236675 MsG0780040688.01.T01:CDS
ACTGGATGAAGAAATAGATA+AGG 0.558410 7:+81237575 MsG0780040688.01.T01:CDS
TCCATCATATGTGAAGAAAA+GGG 0.560512 7:+81236623 MsG0780040688.01.T01:CDS
TCCATCAACAGGTTCTCTTG+TGG 0.561510 7:+81237368 MsG0780040688.01.T01:CDS
GAAGCTTGAGAACTTGAAGC+TGG 0.561670 7:-81238204 None:intergenic
TTCCTTGTACAATCTTTGGA+CGG 0.563359 7:-81236677 None:intergenic
AGAACTAGGTAGGTGCATGC+AGG 0.569739 7:-81239610 None:intergenic
TACCTGTCAAGATCAAGGAC+TGG 0.569959 7:-81238717 None:intergenic
GAAATCAGTGCAACAAATGG+TGG 0.572848 7:+81236113 MsG0780040688.01.T01:CDS
CACTTGCAATGTCCGTGTGT+TGG 0.574543 7:+81235768 None:intergenic
AAAGATATTATTACACCAAG+TGG 0.576063 7:-81239400 None:intergenic
CAGTGAAAAGATGGCCACAT+TGG 0.576184 7:+81237434 MsG0780040688.01.T01:CDS
TCAAGCCACAGAAGCTGTGT+GGG 0.579053 7:-81239681 None:intergenic
ACATACTTGTGGTAAGCTAA+AGG 0.582503 7:-81236416 None:intergenic
AAGATATTATTACACCAAGT+GGG 0.595317 7:-81239399 None:intergenic
GCCAACCACAACCGTGACGA+GGG 0.595392 7:-81238538 None:intergenic
GGCCAACCACAACCGTGACG+AGG 0.597641 7:-81238539 None:intergenic
GTCGTGTATTGACATGTAGA+CGG 0.597739 7:+81239817 MsG0780040688.01.T01:three_prime_UTR
TTGCTGATCGAATGCTTGCA+TGG 0.600379 7:-81237514 None:intergenic
TATTATGGGTGACAATAGTA+CGG 0.600421 7:+81236393 MsG0780040688.01.T01:CDS
ATCAAGCCACAGAAGCTGTG+TGG 0.603181 7:-81239682 None:intergenic
TCGTGTATTGACATGTAGAC+GGG 0.604243 7:+81239818 MsG0780040688.01.T01:three_prime_UTR
TCTTCAAGCTTCCCATGACA+TGG 0.604681 7:+81237479 MsG0780040688.01.T01:CDS
GTCACCTCTAGCCATGTCAT+GGG 0.607351 7:-81237490 None:intergenic
TAAATCTTCAAAGCTTTGTG+AGG 0.609297 7:+81238150 MsG0780040688.01.T01:CDS
AGTGTCAAATGGTGATCAGA+GGG 0.609348 7:+81239648 MsG0780040688.01.T01:three_prime_UTR
ACCTGTCAAGATCAAGGACT+GGG 0.612834 7:-81238716 None:intergenic
CACCGATTGTGAGGACATGA+TGG 0.613536 7:+81238180 MsG0780040688.01.T01:CDS
ACCAAGTACCTGCTTCAGGA+AGG 0.616523 7:-81236727 None:intergenic
AAGTGTCAAATGGTGATCAG+AGG 0.619570 7:+81239647 MsG0780040688.01.T01:three_prime_UTR
GGCACTGTACACCGATTGTG+AGG 0.619572 7:+81238171 MsG0780040688.01.T01:CDS
TTATAAAGGAGTACAACCAC+AGG 0.623382 7:+81238490 MsG0780040688.01.T01:CDS
GCTTCCCATGACATGGCTAG+AGG 0.624847 7:+81237486 MsG0780040688.01.T01:CDS
CTACGAGGGACGTATGGCAA+AGG 0.627470 7:+81238309 MsG0780040688.01.T01:CDS
GCTTTGTGACTTGAAGGATG+GGG 0.644739 7:+81236593 MsG0780040688.01.T01:CDS
CTGACTTCTTAGCATGGTGA+CGG 0.653596 7:-81237545 None:intergenic
TGGAAGAGGTAGAGCCAATG+TGG 0.653977 7:-81237448 None:intergenic
TGACCAAAACAACCTTGTGT+AGG 0.656892 7:-81238625 None:intergenic
CTTCACTCTATTCCAACACA+CGG 0.659292 7:-81235780 None:intergenic
GCGTGACTGACTTCTTAGCA+TGG 0.660593 7:-81237551 None:intergenic
TTGGCTCTACCTCTTCCAGA+AGG 0.665756 7:+81237453 MsG0780040688.01.T01:CDS
ACCTTCAAAAGCAAACTACG+AGG 0.688387 7:+81238294 MsG0780040688.01.T01:CDS
TCAAACAGCCACATCTCCAG+CGG 0.692057 7:+81236565 MsG0780040688.01.T01:intron
ACTTACGCAGAAAATCACGT+TGG 0.700511 7:-81235945 None:intergenic
CCTTCAAAAGCAAACTACGA+GGG 0.700718 7:+81238295 MsG0780040688.01.T01:CDS
GTAAAATCAACATGATACTG+TGG 0.700820 7:-81239713 None:intergenic
CGTGTGTTGGAATAGAGTGA+AGG 0.701201 7:+81235781 MsG0780040688.01.T01:CDS
TATTTCTGGAGACCTACACA+AGG 0.706921 7:+81238613 MsG0780040688.01.T01:CDS
CCAACCAATTGAAAAGCCTG+TGG 0.707705 7:-81238506 None:intergenic
TACATGTCAATACACGACAG+TGG 0.727087 7:-81239812 None:intergenic
TGCTTGCAACAGAACTAGGT+AGG 0.736436 7:-81239620 None:intergenic
AAAAGAAACATGGATCACGG+TGG 0.783518 7:+81239452 MsG0780040688.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGAACTTTATAATAAAC+CGG - Chr7:81238563-81238582 None:intergenic 15.0%
!! AATATTCGTTATAGTATAAT+GGG + Chr7:81237607-81237626 MsG0780040688.01.T01:intron 15.0%
!! GTAATATTATTACTGATAAT+TGG - Chr7:81236304-81236323 None:intergenic 15.0%
!! TTAAAGCTTATATTTACTAT+GGG + Chr7:81238062-81238081 MsG0780040688.01.T01:intron 15.0%
!!! AATGTAGCATAATTTTTTTA+AGG + Chr7:81236999-81237018 MsG0780040688.01.T01:intron 15.0%
!!! ATCAAACTAACAATATTTTA+TGG + Chr7:81239323-81239342 MsG0780040688.01.T01:intron 15.0%
!!! ATTATGCTACATTTTATATA+AGG - Chr7:81236992-81237011 None:intergenic 15.0%
!!! TATCTTTTTTCATTCTATAT+TGG + Chr7:81239416-81239435 MsG0780040688.01.T01:CDS 15.0%
!!! TCAAATATGTTATATAGTTT+TGG + Chr7:81237713-81237732 MsG0780040688.01.T01:intron 15.0%
!!! TTTAAAGCTTATATTTACTA+TGG + Chr7:81238061-81238080 MsG0780040688.01.T01:intron 15.0%
!! ACATCAAATTAACAACAAAA+AGG - Chr7:81235856-81235875 None:intergenic 20.0%
!! ACTGTAAAGTAATAATTCAT+TGG - Chr7:81239738-81239757 None:intergenic 20.0%
!! CAGTAATAATATTACTAGTT+TGG + Chr7:81236309-81236328 MsG0780040688.01.T01:intron 20.0%
!! GAATATTCGTTATAGTATAA+TGG + Chr7:81237606-81237625 MsG0780040688.01.T01:intron 20.0%
!! TCATCAGAAAACATTAAAAA+TGG - Chr7:81237219-81237238 None:intergenic 20.0%
!! TGTTTGATTCATAAAAACTA+TGG + Chr7:81239176-81239195 MsG0780040688.01.T01:intron 20.0%
!!! AAAAAATTGCTTTAGAAAAC+AGG - Chr7:81236207-81236226 None:intergenic 20.0%
!!! AAATATTTTGTTTGATTGAG+AGG - Chr7:81237114-81237133 None:intergenic 20.0%
!!! AAGTTCATTTTGATTGAAAT+TGG + Chr7:81238573-81238592 MsG0780040688.01.T01:CDS 20.0%
!!! AATATTTTGTTTGATTGAGA+GGG - Chr7:81237113-81237132 None:intergenic 20.0%
!!! ATGGTTACTTTTTATATTTC+TGG + Chr7:81238599-81238618 MsG0780040688.01.T01:CDS 20.0%
!!! CAATGCTTATAAAGTTATTT+TGG + Chr7:81235993-81236012 MsG0780040688.01.T01:intron 20.0%
!!! CATATTCATTTGTTACATTA+AGG - Chr7:81238442-81238461 None:intergenic 20.0%
!!! TAAAAGATAAAGCTGTTTTA+TGG - Chr7:81237305-81237324 None:intergenic 20.0%
!!! TTTAAGATCCATTATATTGT+AGG + Chr7:81238808-81238827 MsG0780040688.01.T01:intron 20.0%
!!! TTTTATTAAAAACACTGCTT+TGG + Chr7:81236514-81236533 MsG0780040688.01.T01:intron 20.0%
!!! TTTTTATTGAAATTGCAGAT+GGG + Chr7:81239372-81239391 MsG0780040688.01.T01:intron 20.0%
!!! TTTTTATTGCTGCTATATAA+TGG - Chr7:81239484-81239503 None:intergenic 20.0%
! AAAACTTATGATGATTCAGT+TGG + Chr7:81239521-81239540 MsG0780040688.01.T01:exon 25.0%
! AAAGATATTATTACACCAAG+TGG - Chr7:81239403-81239422 None:intergenic 25.0%
! AAGATATTATTACACCAAGT+GGG - Chr7:81239402-81239421 None:intergenic 25.0%
! ATATATCATCCAATCAAATG+CGG - Chr7:81237992-81238011 None:intergenic 25.0%
! ATCATCAGATCAATCAAATT+CGG + Chr7:81236359-81236378 MsG0780040688.01.T01:intron 25.0%
! CTTTAAGTAATAGTCTATGA+AGG + Chr7:81236854-81236873 MsG0780040688.01.T01:intron 25.0%
! GAAAACATTAAAAATGGCAA+AGG - Chr7:81237213-81237232 None:intergenic 25.0%
! GAAAAGAAAATAGGCTTATT+GGG + Chr7:81237636-81237655 MsG0780040688.01.T01:intron 25.0%
! GGAAAAATCATATTTACTTG+AGG + Chr7:81238083-81238102 MsG0780040688.01.T01:intron 25.0%
! GTCTAAGTCTCTATTTATAA+AGG + Chr7:81238476-81238495 MsG0780040688.01.T01:CDS 25.0%
! TAAGTTATACAGTGAAAAGA+TGG + Chr7:81237425-81237444 MsG0780040688.01.T01:CDS 25.0%
! TACAAGGAAAATCTCTAAAT+GGG + Chr7:81236691-81236710 MsG0780040688.01.T01:CDS 25.0%
! TCATATAAATCGATGTAAAC+AGG - Chr7:81238873-81238892 None:intergenic 25.0%
! TTAAAGGATATTAAGCATCT+TGG - Chr7:81237962-81237981 None:intergenic 25.0%
! TTATCTAGCCTACAATATAA+TGG - Chr7:81238819-81238838 None:intergenic 25.0%
! TTATTGGGAATTTAATTAGC+TGG + Chr7:81237651-81237670 MsG0780040688.01.T01:intron 25.0%
! TTGAAAGAACGAAAGAAATA+CGG - Chr7:81238749-81238768 None:intergenic 25.0%
!! CTTTTTATTGAAATTGCAGA+TGG + Chr7:81239371-81239390 MsG0780040688.01.T01:intron 25.0%
!! GATACTGACTATCTTTATTA+GGG - Chr7:81236158-81236177 None:intergenic 25.0%
!! GTTTTTCATGTTCTCTTTAA+TGG + Chr7:81236748-81236767 MsG0780040688.01.T01:intron 25.0%
!! TAAATAGTTTTCTTTGTTGG+CGG + Chr7:81239199-81239218 MsG0780040688.01.T01:intron 25.0%
!! TGATACTGACTATCTTTATT+AGG - Chr7:81236159-81236178 None:intergenic 25.0%
!! TGGTAAATAGTTTTCTTTGT+TGG + Chr7:81239196-81239215 MsG0780040688.01.T01:intron 25.0%
!!! AGCTTTTTCATTTTTGTACA+TGG + Chr7:81239581-81239600 MsG0780040688.01.T01:three_prime_UTR 25.0%
!!! CTTTTTTCATTCTATATTGG+CGG + Chr7:81239419-81239438 MsG0780040688.01.T01:CDS 25.0%
!!! TGTCACATTTTAGAGTAAAT+TGG + Chr7:81239764-81239783 MsG0780040688.01.T01:three_prime_UTR 25.0%
!!! TTCATTTTGATTGAAATTGG+AGG + Chr7:81238576-81238595 MsG0780040688.01.T01:CDS 25.0%
!!! TTGATGTATTTTTCAATTGC+TGG + Chr7:81235869-81235888 MsG0780040688.01.T01:intron 25.0%
AAAATGGCAAAGGACTAAAT+TGG - Chr7:81237203-81237222 None:intergenic 30.0%
AAATGGCAAAGGACTAAATT+GGG - Chr7:81237202-81237221 None:intergenic 30.0%
AACAACAGATATCTCTAACA+TGG - Chr7:81236833-81236852 None:intergenic 30.0%
AATAGTTGATTAGATGAACG+AGG - Chr7:81235826-81235845 None:intergenic 30.0%
ACAAATGAATATGCAGATGT+TGG + Chr7:81238449-81238468 MsG0780040688.01.T01:intron 30.0%
ACTGGATGAAGAAATAGATA+AGG + Chr7:81237575-81237594 MsG0780040688.01.T01:CDS 30.0%
AGAGAAAACATACTGCATAA+GGG - Chr7:81237179-81237198 None:intergenic 30.0%
AGGAGACAGAAATATTGATA+TGG + Chr7:81236253-81236272 MsG0780040688.01.T01:intron 30.0%
AGGAGATAACTCTCTTAATT+TGG - Chr7:81237083-81237102 None:intergenic 30.0%
ATAAACACTTGTGAGATTGT+TGG + Chr7:81238907-81238926 MsG0780040688.01.T01:intron 30.0%
ATAAGAATGAATTCCACGTT+AGG - Chr7:81236489-81236508 None:intergenic 30.0%
ATCCATCATATGTGAAGAAA+AGG + Chr7:81236622-81236641 MsG0780040688.01.T01:CDS 30.0%
ATGTTAAGCATATGAAACAG+TGG - Chr7:81238418-81238437 None:intergenic 30.0%
ATTAAAAACACTGCTTTGGT+TGG + Chr7:81236518-81236537 MsG0780040688.01.T01:intron 30.0%
CAAATGCGGCTAAAATTTAA+AGG - Chr7:81237978-81237997 None:intergenic 30.0%
CTTGGAGAGCTTATAAAAAT+AGG - Chr7:81238981-81239000 None:intergenic 30.0%
GGAAAAGAAAATAGGCTTAT+TGG + Chr7:81237635-81237654 MsG0780040688.01.T01:intron 30.0%
GGCTAATTAATCCTTGAAAT+TGG + Chr7:81236539-81236558 MsG0780040688.01.T01:intron 30.0%
GTAAAATCAACATGATACTG+TGG - Chr7:81239716-81239735 None:intergenic 30.0%
GTACAAGGAAAATCTCTAAA+TGG + Chr7:81236690-81236709 MsG0780040688.01.T01:CDS 30.0%
TAAACACTTGTGAGATTGTT+GGG + Chr7:81238908-81238927 MsG0780040688.01.T01:intron 30.0%
TAAGAATGAATTCCACGTTA+GGG - Chr7:81236488-81236507 None:intergenic 30.0%
TAAGGAGATACAAAGTAAGT+TGG + Chr7:81237017-81237036 MsG0780040688.01.T01:intron 30.0%
TATTATGGGTGACAATAGTA+CGG + Chr7:81236393-81236412 MsG0780040688.01.T01:CDS 30.0%
TCAATGGCAAAATTTAATGC+AGG + Chr7:81238229-81238248 MsG0780040688.01.T01:CDS 30.0%
TCATCAGATCAATCAAATTC+GGG + Chr7:81236360-81236379 MsG0780040688.01.T01:intron 30.0%
TCCATCATATGTGAAGAAAA+GGG + Chr7:81236623-81236642 MsG0780040688.01.T01:CDS 30.0%
TGTTATGGGAAAAAGAAACA+TGG + Chr7:81239442-81239461 MsG0780040688.01.T01:CDS 30.0%
TTACTTGAGGATAATTATGC+AGG + Chr7:81238096-81238115 MsG0780040688.01.T01:intron 30.0%
TTCTTTGTCGTACTTTAAGT+TGG + Chr7:81239129-81239148 MsG0780040688.01.T01:intron 30.0%
! AAATAGTTTTCTTTGTTGGC+GGG + Chr7:81239200-81239219 MsG0780040688.01.T01:intron 30.0%
! AACTTTATAAGCATTGCATG+AGG - Chr7:81235989-81236008 None:intergenic 30.0%
! GATTTTCCTTGTACAATCTT+TGG - Chr7:81236684-81236703 None:intergenic 30.0%
! GCATTAAATTTTGCCATTGA+AGG - Chr7:81238229-81238248 None:intergenic 30.0%
! TAAATCTTCAAAGCTTTGTG+AGG + Chr7:81238150-81238169 MsG0780040688.01.T01:CDS 30.0%
! TCTTTGTCGTACTTTAAGTT+GGG + Chr7:81239130-81239149 MsG0780040688.01.T01:intron 30.0%
! TTTTATAAGCTCTCCAAGAT+TGG + Chr7:81238983-81239002 MsG0780040688.01.T01:intron 30.0%
!! AAATTTTAGCCGCATTTGAT+TGG + Chr7:81237980-81237999 MsG0780040688.01.T01:intron 30.0%
!! ACTGATTTTTAGAAGACATG+AGG - Chr7:81236447-81236466 None:intergenic 30.0%
!! CATAAGTTTTAGTCTGTTCT+TGG - Chr7:81239511-81239530 None:intergenic 30.0%
!! GCTCTTTATATTTAACTTGC+AGG + Chr7:81236233-81236252 MsG0780040688.01.T01:intron 30.0%
!! GTTGTTTTCATAACCAATCT+TGG - Chr7:81238999-81239018 None:intergenic 30.0%
!! TTTTGATTGAAATTGGAGGA+TGG + Chr7:81238580-81238599 MsG0780040688.01.T01:CDS 30.0%
!!! CTCTATTTTGATCTTGGAAT+TGG + Chr7:81238028-81238047 MsG0780040688.01.T01:intron 30.0%
!!! TTCAATTGCTGGCTTTTATA+GGG + Chr7:81235880-81235899 MsG0780040688.01.T01:intron 30.0%
!!! TTTCAATTGCTGGCTTTTAT+AGG + Chr7:81235879-81235898 MsG0780040688.01.T01:intron 30.0%
ACATACTTGTGGTAAGCTAA+AGG - Chr7:81236419-81236438 None:intergenic 35.0%
AGAGAAAATGGAATGCAAGT+AGG - Chr7:81239268-81239287 None:intergenic 35.0%
AGAGATGCTAATAGAGAGAA+AGG - Chr7:81237044-81237063 None:intergenic 35.0%
AGATTGTTGGGAAAAGCTTA+TGG + Chr7:81238920-81238939 MsG0780040688.01.T01:intron 35.0%
ATACTTGAAGCCTTGAACAA+GGG + Chr7:81237339-81237358 MsG0780040688.01.T01:CDS 35.0%
ATCCAATAGAGTTGACATGA+TGG - Chr7:81236063-81236082 None:intergenic 35.0%
CAATCAAATTCGGGATTCAT+TGG + Chr7:81236369-81236388 MsG0780040688.01.T01:CDS 35.0%
CACTTTACTACAATCCAGTT+TGG + Chr7:81238655-81238674 MsG0780040688.01.T01:CDS 35.0%
GAGAAAATGGAATGCAAGTA+GGG - Chr7:81239267-81239286 None:intergenic 35.0%
GAGAGAAAACATACTGCATA+AGG - Chr7:81237180-81237199 None:intergenic 35.0%
GAGATGCTAATAGAGAGAAA+GGG - Chr7:81237043-81237062 None:intergenic 35.0%
GCAACTATAAAATGCCAAAC+TGG - Chr7:81238672-81238691 None:intergenic 35.0%
GGAAAAAGAAACATGGATCA+CGG + Chr7:81239449-81239468 MsG0780040688.01.T01:CDS 35.0%
GTGATTCATAAGTCCTTCAT+AGG - Chr7:81237866-81237885 None:intergenic 35.0%
TATCGGAGTGATGAACAAAA+TGG - Chr7:81239549-81239568 None:intergenic 35.0%
TATGAAACAGTGGCAAATCA+AGG - Chr7:81238408-81238427 None:intergenic 35.0%
TGATATGGTATAGTCTCTTC+TGG + Chr7:81236268-81236287 MsG0780040688.01.T01:intron 35.0%
TTACTTACCTGTCAAGATCA+AGG - Chr7:81238725-81238744 None:intergenic 35.0%
TTCCTTAATATCCTGCAGAA+GGG + Chr7:81236091-81236110 MsG0780040688.01.T01:intron 35.0%
TTCCTTGTACAATCTTTGGA+CGG - Chr7:81236680-81236699 None:intergenic 35.0%
TTGGTCACTGCTGAATAATT+GGG + Chr7:81236012-81236031 MsG0780040688.01.T01:intron 35.0%
TTTCCTTAATATCCTGCAGA+AGG + Chr7:81236090-81236109 MsG0780040688.01.T01:intron 35.0%
TTTGGTCACTGCTGAATAAT+TGG + Chr7:81236011-81236030 MsG0780040688.01.T01:intron 35.0%
! AATAGTTTTCTTTGTTGGCG+GGG + Chr7:81239201-81239220 MsG0780040688.01.T01:intron 35.0%
! ACTTTTGAGCATGATTGTGT+TGG + Chr7:81238271-81238290 MsG0780040688.01.T01:CDS 35.0%
! ATACTGCATAAGGGTTTGTT+TGG - Chr7:81237170-81237189 None:intergenic 35.0%
! ATTCTATATTGGCGGTGTTA+TGG + Chr7:81239427-81239446 MsG0780040688.01.T01:CDS 35.0%
! CTCTAAAAGATAGTCAACAG+TGG - Chr7:81239301-81239320 None:intergenic 35.0%
! CTGTTTGAAGTCCAATTTCA+AGG - Chr7:81236553-81236572 None:intergenic 35.0%
! GCATTTTATAGTTGCATCGT+GGG + Chr7:81238677-81238696 MsG0780040688.01.T01:CDS 35.0%
! GCTAGATAAGTTAAGTTGTG+TGG + Chr7:81238830-81238849 MsG0780040688.01.T01:intron 35.0%
! GTTATAGTATAATGGGAGCT+TGG + Chr7:81237614-81237633 MsG0780040688.01.T01:intron 35.0%
! TAAGGGTTTGTTTGGTTCAA+AGG - Chr7:81237162-81237181 None:intergenic 35.0%
! TCCCTTTTCTTCACATATGA+TGG - Chr7:81236627-81236646 None:intergenic 35.0%
! TCTTGTGGAGATTTTCAACA+AGG + Chr7:81237383-81237402 MsG0780040688.01.T01:CDS 35.0%
! TTATAAAGGAGTACAACCAC+AGG + Chr7:81238490-81238509 MsG0780040688.01.T01:CDS 35.0%
! TTCCATTTTCTCTCAAGCAA+TGG + Chr7:81239275-81239294 MsG0780040688.01.T01:intron 35.0%
!! ATTTTGTTTGATTGAGAGGG+AGG - Chr7:81237110-81237129 None:intergenic 35.0%
!! TTCTATATTGGCGGTGTTAT+GGG + Chr7:81239428-81239447 MsG0780040688.01.T01:CDS 35.0%
!! TTTTGTTTGATTGAGAGGGA+GGG - Chr7:81237109-81237128 None:intergenic 35.0%
!!! AGTCTGCTCTATTTTGATCT+TGG + Chr7:81238022-81238041 MsG0780040688.01.T01:intron 35.0%
AAAAACCAAGTACCTGCTTC+AGG - Chr7:81236734-81236753 None:intergenic 40.0%
AAAAGAAACATGGATCACGG+TGG + Chr7:81239452-81239471 MsG0780040688.01.T01:CDS 40.0%
AAATGAAAAAGCTCGCCCAA+AGG - Chr7:81239574-81239593 None:intergenic 40.0%
AAATGGAATGCAAGTAGGGT+CGG - Chr7:81239263-81239282 None:intergenic 40.0%
AAGACACTAGCAACAAACAC+AGG - Chr7:81237796-81237815 None:intergenic 40.0%
AAGTGTCAAATGGTGATCAG+AGG + Chr7:81239647-81239666 MsG0780040688.01.T01:three_prime_UTR 40.0%
ACCTTCAAAAGCAAACTACG+AGG + Chr7:81238294-81238313 MsG0780040688.01.T01:CDS 40.0%
ACTTACGCAGAAAATCACGT+TGG - Chr7:81235948-81235967 None:intergenic 40.0%
AGGGAAATCAGTGCAACAAA+TGG + Chr7:81236110-81236129 MsG0780040688.01.T01:CDS 40.0%
AGTGTCAAATGGTGATCAGA+GGG + Chr7:81239648-81239667 MsG0780040688.01.T01:three_prime_UTR 40.0%
AGTTCTCAAGCTTCCTTCAA+TGG + Chr7:81238213-81238232 MsG0780040688.01.T01:CDS 40.0%
ATCCGTCCAAAGATTGTACA+AGG + Chr7:81236675-81236694 MsG0780040688.01.T01:CDS 40.0%
ATGAGGAAGACACATACTTG+TGG - Chr7:81236430-81236449 None:intergenic 40.0%
ATTAGATGAACGAGGAGCTA+AGG - Chr7:81235818-81235837 None:intergenic 40.0%
ATTCCACGTTAGGGTTGAAA+TGG - Chr7:81236479-81236498 None:intergenic 40.0%
CAGTGGCAAATCAAGGAAAA+TGG - Chr7:81238401-81238420 None:intergenic 40.0%
CATCACTCCGATATTCCTTT+GGG + Chr7:81239556-81239575 MsG0780040688.01.T01:three_prime_UTR 40.0%
CCTTCAAAAGCAAACTACGA+GGG + Chr7:81238295-81238314 MsG0780040688.01.T01:CDS 40.0%
CTTCACTCTATTCCAACACA+CGG - Chr7:81235783-81235802 None:intergenic 40.0%
GAAATCAGTGCAACAAATGG+TGG + Chr7:81236113-81236132 MsG0780040688.01.T01:CDS 40.0%
GAAGCTTGAAGATATCCTTC+TGG - Chr7:81237471-81237490 None:intergenic 40.0%
GATACTTGAAGCCTTGAACA+AGG + Chr7:81237338-81237357 MsG0780040688.01.T01:intron 40.0%
GGGAGCTTGGAAAAGAAAAT+AGG + Chr7:81237627-81237646 MsG0780040688.01.T01:intron 40.0%
GTCCATCATGTCAACTCTAT+TGG + Chr7:81236058-81236077 MsG0780040688.01.T01:intron 40.0%
GTGTGGTTTCATGACTCTTA+GGG + Chr7:81238847-81238866 MsG0780040688.01.T01:intron 40.0%
TACATGTCAATACACGACAG+TGG - Chr7:81239815-81239834 None:intergenic 40.0%
TATGGAACCTCTCCAACATT+GGG + Chr7:81236907-81236926 MsG0780040688.01.T01:intron 40.0%
TCATCACTCCGATATTCCTT+TGG + Chr7:81239555-81239574 MsG0780040688.01.T01:three_prime_UTR 40.0%
TGACCAAAACAACCTTGTGT+AGG - Chr7:81238628-81238647 None:intergenic 40.0%
TGTGTGGTTTCATGACTCTT+AGG + Chr7:81238846-81238865 MsG0780040688.01.T01:intron 40.0%
TTCCCTTCTGCAGGATATTA+AGG - Chr7:81236096-81236115 None:intergenic 40.0%
TTTCCATTTCAACCCTAACG+TGG + Chr7:81236473-81236492 MsG0780040688.01.T01:intron 40.0%
TTTGTTTGATTGAGAGGGAG+GGG - Chr7:81237108-81237127 None:intergenic 40.0%
! AAGCTTTGTGACTTGAAGGA+TGG + Chr7:81236591-81236610 MsG0780040688.01.T01:CDS 40.0%
! AATTTGGTTCACAGAGCGAA+GGG - Chr7:81237067-81237086 None:intergenic 40.0%
! ACAACCACAGGCTTTTCAAT+TGG + Chr7:81238502-81238521 MsG0780040688.01.T01:CDS 40.0%
! AGACCTACACAAGGTTGTTT+TGG + Chr7:81238622-81238641 MsG0780040688.01.T01:CDS 40.0%
! AGCTTTGTGACTTGAAGGAT+GGG + Chr7:81236592-81236611 MsG0780040688.01.T01:CDS 40.0%
! CAAGCACACAAAGTGTCAAA+TGG + Chr7:81239637-81239656 MsG0780040688.01.T01:three_prime_UTR 40.0%
! CGGGATTCATTGGCTATTAT+GGG + Chr7:81236379-81236398 MsG0780040688.01.T01:CDS 40.0%
! GACAAAGCTTTGTGACTTGA+AGG + Chr7:81236587-81236606 MsG0780040688.01.T01:CDS 40.0%
! GCATTCGATCAGCAACATTT+TGG + Chr7:81237522-81237541 MsG0780040688.01.T01:CDS 40.0%
! GGCATTTTATAGTTGCATCG+TGG + Chr7:81238676-81238695 MsG0780040688.01.T01:CDS 40.0%
! GGTTTGTTTGGTTCAAAGGA+GGG - Chr7:81237158-81237177 None:intergenic 40.0%
! GTCGTGTATTGACATGTAGA+CGG + Chr7:81239817-81239836 MsG0780040688.01.T01:three_prime_UTR 40.0%
! GTTTGTTTGGTTCAAAGGAG+GGG - Chr7:81237157-81237176 None:intergenic 40.0%
! TAATTTGGTTCACAGAGCGA+AGG - Chr7:81237068-81237087 None:intergenic 40.0%
! TCGGGATTCATTGGCTATTA+TGG + Chr7:81236378-81236397 MsG0780040688.01.T01:CDS 40.0%
! TCGTGTATTGACATGTAGAC+GGG + Chr7:81239818-81239837 MsG0780040688.01.T01:three_prime_UTR 40.0%
! TGAAGATATCCTTCTGGAAG+AGG - Chr7:81237465-81237484 None:intergenic 40.0%
!! AGAGTTGACATGATGGACAA+GGG - Chr7:81236056-81236075 None:intergenic 40.0%
!! TAGAGTTGACATGATGGACA+AGG - Chr7:81236057-81236076 None:intergenic 40.0%
!! TATTTCTGGAGACCTACACA+AGG + Chr7:81238613-81238632 MsG0780040688.01.T01:CDS 40.0%
AAGCTCGCCCAAAGGAATAT+CGG - Chr7:81239566-81239585 None:intergenic 45.0%
AAGGGAGAGATTCCATCAAC+AGG + Chr7:81237357-81237376 MsG0780040688.01.T01:CDS 45.0%
ACCTGTCAAGATCAAGGACT+GGG - Chr7:81238719-81238738 None:intergenic 45.0%
ATGTTGGAGAGGTTCCATAG+AGG - Chr7:81236906-81236925 None:intergenic 45.0%
CAAATCTCCCAATGTTGGAG+AGG - Chr7:81236917-81236936 None:intergenic 45.0%
CAACATTGGGAGATTTGGAG+GGG + Chr7:81236920-81236939 MsG0780040688.01.T01:intron 45.0%
CAGGTTCAAATGCAACATCC+TGG - Chr7:81235906-81235925 None:intergenic 45.0%
CAGTGAAAAGATGGCCACAT+TGG + Chr7:81237434-81237453 MsG0780040688.01.T01:CDS 45.0%
CCAACATTGGGAGATTTGGA+GGG + Chr7:81236919-81236938 MsG0780040688.01.T01:intron 45.0%
CCAACCAATTGAAAAGCCTG+TGG - Chr7:81238509-81238528 None:intergenic 45.0%
CGTGTGTTGGAATAGAGTGA+AGG + Chr7:81235781-81235800 MsG0780040688.01.T01:CDS 45.0%
CTATGGAACCTCTCCAACAT+TGG + Chr7:81236906-81236925 MsG0780040688.01.T01:intron 45.0%
CTCTCCAACATTGGGAGATT+TGG + Chr7:81236915-81236934 MsG0780040688.01.T01:intron 45.0%
CTGACTTCTTAGCATGGTGA+CGG - Chr7:81237548-81237567 None:intergenic 45.0%
GAAGCTTGAGAACTTGAAGC+TGG - Chr7:81238207-81238226 None:intergenic 45.0%
GCTTTGTGACTTGAAGGATG+GGG + Chr7:81236593-81236612 MsG0780040688.01.T01:CDS 45.0%
GGCCATTGCTTGAGAGAAAA+TGG - Chr7:81239280-81239299 None:intergenic 45.0%
GTCCATCATGTCCTCACAAT+CGG - Chr7:81238185-81238204 None:intergenic 45.0%
GTTTGTTTCCTTCCTGAAGC+AGG + Chr7:81236719-81236738 MsG0780040688.01.T01:CDS 45.0%
TAAGAAGTCAGTCACGCAAC+TGG + Chr7:81237557-81237576 MsG0780040688.01.T01:CDS 45.0%
TACCTGTCAAGATCAAGGAC+TGG - Chr7:81238720-81238739 None:intergenic 45.0%
TCCAACATTGGGAGATTTGG+AGG + Chr7:81236918-81236937 MsG0780040688.01.T01:intron 45.0%
TCCACAAGAGAACCTGTTGA+TGG - Chr7:81237372-81237391 None:intergenic 45.0%
TCCATCAACAGGTTCTCTTG+TGG + Chr7:81237368-81237387 MsG0780040688.01.T01:CDS 45.0%
TCTTCAAGCTTCCCATGACA+TGG + Chr7:81237479-81237498 MsG0780040688.01.T01:CDS 45.0%
TGCTTGCAACAGAACTAGGT+AGG - Chr7:81239623-81239642 None:intergenic 45.0%
TGGAATCTCTCCCTTGTTCA+AGG - Chr7:81237352-81237371 None:intergenic 45.0%
TGGTTCAAAGGAGGGGAAAA+GGG - Chr7:81237150-81237169 None:intergenic 45.0%
TGTGTGCTTGCAACAGAACT+AGG - Chr7:81239627-81239646 None:intergenic 45.0%
TGTTGCTAGTGTCTTGCGTA+GGG + Chr7:81237801-81237820 MsG0780040688.01.T01:intron 45.0%
TTGCTGATCGAATGCTTGCA+TGG - Chr7:81237517-81237536 None:intergenic 45.0%
TTGGATAAGCCACAAGAGCT+TGG - Chr7:81235929-81235948 None:intergenic 45.0%
TTGGTTCAAAGGAGGGGAAA+AGG - Chr7:81237151-81237170 None:intergenic 45.0%
TTGTTGCTAGTGTCTTGCGT+AGG + Chr7:81237800-81237819 MsG0780040688.01.T01:intron 45.0%
! CAGGCTTTTCAATTGGTTGG+TGG + Chr7:81238509-81238528 MsG0780040688.01.T01:CDS 45.0%
! CCACAGGCTTTTCAATTGGT+TGG + Chr7:81238506-81238525 MsG0780040688.01.T01:CDS 45.0%
! GGGACTAAATCCCTTGCTAT+AGG - Chr7:81239227-81239246 None:intergenic 45.0%
! GGGTTTGTTTGGTTCAAAGG+AGG - Chr7:81237159-81237178 None:intergenic 45.0%
! TAGGGTCGGCTCAAGTATAA+GGG - Chr7:81239249-81239268 None:intergenic 45.0%
!!! CCCTCGTAGTTTGCTTTTGA+AGG - Chr7:81238298-81238317 None:intergenic 45.0%
ACCAAGTACCTGCTTCAGGA+AGG - Chr7:81236730-81236749 None:intergenic 50.0%
AGAACTAGGTAGGTGCATGC+AGG - Chr7:81239613-81239632 None:intergenic 50.0%
AGCAAACTACGAGGGACGTA+TGG + Chr7:81238303-81238322 MsG0780040688.01.T01:CDS 50.0%
ATAAGCCACAAGAGCTTGGC+AGG - Chr7:81235925-81235944 None:intergenic 50.0%
ATCAAGCCACAGAAGCTGTG+TGG - Chr7:81239685-81239704 None:intergenic 50.0%
CCCTCCAAATCTCCCAATGT+TGG - Chr7:81236922-81236941 None:intergenic 50.0%
GTCACCTCTAGCCATGTCAT+GGG - Chr7:81237493-81237512 None:intergenic 50.0%
GTGAGATGCTCGACCTATGA+AGG + Chr7:81237850-81237869 MsG0780040688.01.T01:intron 50.0%
TCAAACAGCCACATCTCCAG+CGG + Chr7:81236565-81236584 MsG0780040688.01.T01:intron 50.0%
TCAAAGGAGGGGAAAAGGGA+AGG - Chr7:81237146-81237165 None:intergenic 50.0%
TCAAGCCACAGAAGCTGTGT+GGG - Chr7:81239684-81239703 None:intergenic 50.0%
TCCTTCCTGAAGCAGGTACT+TGG + Chr7:81236726-81236745 MsG0780040688.01.T01:intron 50.0%
TGGAAGAGGTAGAGCCAATG+TGG - Chr7:81237451-81237470 None:intergenic 50.0%
TTGAACCTGCCAAGCTCTTG+TGG + Chr7:81235917-81235936 MsG0780040688.01.T01:CDS 50.0%
! AGGGTCGGCTCAAGTATAAG+GGG - Chr7:81239248-81239267 None:intergenic 50.0%
! AGTCACAAAGCTTTGTCCGC+TGG - Chr7:81236584-81236603 None:intergenic 50.0%
! CACCGATTGTGAGGACATGA+TGG + Chr7:81238180-81238199 MsG0780040688.01.T01:CDS 50.0%
! GCGTGACTGACTTCTTAGCA+TGG - Chr7:81237554-81237573 None:intergenic 50.0%
! GTAGGGTCGGCTCAAGTATA+AGG - Chr7:81239250-81239269 None:intergenic 50.0%
!! TGCACTGATTTCCCTTCTGC+AGG - Chr7:81236105-81236124 None:intergenic 50.0%
!! TTGGCTCTACCTCTTCCAGA+AGG + Chr7:81237453-81237472 MsG0780040688.01.T01:CDS 50.0%
!!! TTGCTGGCTTTTATAGGGCC+AGG + Chr7:81235885-81235904 MsG0780040688.01.T01:intron 50.0%
AGGGACGTATGGCAAAGGTC+TGG + Chr7:81238314-81238333 MsG0780040688.01.T01:intron 55.0%
AGGTTCCATAGAGGTCGAGG+TGG - Chr7:81236897-81236916 None:intergenic 55.0%
CATCTCCCACACAGCTTCTG+TGG + Chr7:81239676-81239695 MsG0780040688.01.T01:three_prime_UTR 55.0%
CGTCACCTCTAGCCATGTCA+TGG - Chr7:81237494-81237513 None:intergenic 55.0%
CTACGAGGGACGTATGGCAA+AGG + Chr7:81238309-81238328 MsG0780040688.01.T01:CDS 55.0%
GAACGAGGAGCTAAGGCATG+TGG - Chr7:81235811-81235830 None:intergenic 55.0%
GAGAGGTTCCATAGAGGTCG+AGG - Chr7:81236900-81236919 None:intergenic 55.0%
GCCCAGTCCTTGATCTTGAC+AGG + Chr7:81238715-81238734 MsG0780040688.01.T01:CDS 55.0%
GCTTCCCATGACATGGCTAG+AGG + Chr7:81237486-81237505 MsG0780040688.01.T01:CDS 55.0%
GGTTCCATAGAGGTCGAGGT+GGG - Chr7:81236896-81236915 None:intergenic 55.0%
GTTCCATAGAGGTCGAGGTG+GGG - Chr7:81236895-81236914 None:intergenic 55.0%
TTCCATAGAGGTCGAGGTGG+GGG - Chr7:81236894-81236913 None:intergenic 55.0%
TTGATTGAGAGGGAGGGGAG+AGG - Chr7:81237103-81237122 None:intergenic 55.0%
TTTCTCCCTCGTCACGGTTG+TGG + Chr7:81238533-81238552 MsG0780040688.01.T01:CDS 55.0%
! AGCTTTGTCCGCTGGAGATG+TGG - Chr7:81236576-81236595 None:intergenic 55.0%
! GGCACTGTACACCGATTGTG+AGG + Chr7:81238171-81238190 MsG0780040688.01.T01:CDS 55.0%
! GGGTCGGCTCAAGTATAAGG+GGG - Chr7:81239247-81239266 None:intergenic 55.0%
!! TGCAGATGGGCTATCCCACT+TGG + Chr7:81239385-81239404 MsG0780040688.01.T01:intron 55.0%
ATCCCCCACCTCGACCTCTA+TGG + Chr7:81236889-81236908 MsG0780040688.01.T01:intron 60.0%
GCCAACCACAACCGTGACGA+GGG - Chr7:81238541-81238560 None:intergenic 60.0%
GGTGGCTTTCTCCCTCGTCA+CGG + Chr7:81238527-81238546 MsG0780040688.01.T01:CDS 60.0%
GTTGGCGGGGCCTATAGCAA+GGG + Chr7:81239214-81239233 MsG0780040688.01.T01:intron 60.0%
TCCCTCGTCACGGTTGTGGT+TGG + Chr7:81238537-81238556 MsG0780040688.01.T01:CDS 60.0%
TCGTCACGGTTGTGGTTGGC+CGG + Chr7:81238541-81238560 MsG0780040688.01.T01:CDS 60.0%
TGTTGGCGGGGCCTATAGCA+AGG + Chr7:81239213-81239232 MsG0780040688.01.T01:intron 60.0%
GGCCAACCACAACCGTGACG+AGG - Chr7:81238542-81238561 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 81235776 81239884 81235776 ID=MsG0780040688.01;Name=MsG0780040688.01
Chr7 mRNA 81235776 81239884 81235776 ID=MsG0780040688.01.T01;Parent=MsG0780040688.01;Name=MsG0780040688.01.T01;_AED=0.46;_eAED=0.47;_QI=0|0.88|0.9|1|0.88|0.9|10|362|425
Chr7 exon 81235776 81235802 81235776 ID=MsG0780040688.01.T01:exon:18836;Parent=MsG0780040688.01.T01
Chr7 exon 81235901 81235961 81235901 ID=MsG0780040688.01.T01:exon:18837;Parent=MsG0780040688.01.T01
Chr7 exon 81236109 81236168 81236109 ID=MsG0780040688.01.T01:exon:18838;Parent=MsG0780040688.01.T01
Chr7 exon 81236255 81236274 81236255 ID=MsG0780040688.01.T01:exon:18839;Parent=MsG0780040688.01.T01
Chr7 exon 81236367 81236432 81236367 ID=MsG0780040688.01.T01:exon:18840;Parent=MsG0780040688.01.T01
Chr7 exon 81236573 81236740 81236573 ID=MsG0780040688.01.T01:exon:18841;Parent=MsG0780040688.01.T01
Chr7 exon 81237339 81237596 81237339 ID=MsG0780040688.01.T01:exon:18842;Parent=MsG0780040688.01.T01
Chr7 exon 81238118 81238330 81238118 ID=MsG0780040688.01.T01:exon:18843;Parent=MsG0780040688.01.T01
Chr7 exon 81238465 81238736 81238465 ID=MsG0780040688.01.T01:exon:18844;Parent=MsG0780040688.01.T01
Chr7 exon 81239390 81239884 81239390 ID=MsG0780040688.01.T01:exon:18845;Parent=MsG0780040688.01.T01
Chr7 CDS 81235776 81235802 81235776 ID=MsG0780040688.01.T01:cds;Parent=MsG0780040688.01.T01
Chr7 CDS 81235901 81235961 81235901 ID=MsG0780040688.01.T01:cds;Parent=MsG0780040688.01.T01
Chr7 CDS 81236109 81236168 81236109 ID=MsG0780040688.01.T01:cds;Parent=MsG0780040688.01.T01
Chr7 CDS 81236255 81236274 81236255 ID=MsG0780040688.01.T01:cds;Parent=MsG0780040688.01.T01
Chr7 CDS 81236367 81236432 81236367 ID=MsG0780040688.01.T01:cds;Parent=MsG0780040688.01.T01
Chr7 CDS 81236573 81236740 81236573 ID=MsG0780040688.01.T01:cds;Parent=MsG0780040688.01.T01
Chr7 CDS 81237339 81237596 81237339 ID=MsG0780040688.01.T01:cds;Parent=MsG0780040688.01.T01
Chr7 CDS 81238118 81238330 81238118 ID=MsG0780040688.01.T01:cds;Parent=MsG0780040688.01.T01
Chr7 CDS 81238465 81238736 81238465 ID=MsG0780040688.01.T01:cds;Parent=MsG0780040688.01.T01
Chr7 CDS 81239390 81239522 81239390 ID=MsG0780040688.01.T01:cds;Parent=MsG0780040688.01.T01
Chr7 three_prime_UTR 81239523 81239884 81239523 ID=MsG0780040688.01.T01:three_prime_utr;Parent=MsG0780040688.01.T01
Gene Sequence

>MsG0780040688.01.T01

ATGTCCGTGTGTTGGAATAGAGTGAAGGGCCAGGATGTTGCATTTGAACCTGCCAAGCTCTTGTGGCTTATCCAACGTGATTTTCTGCAAGGGAAATCAGTGCAACAAATGGTGGATGAAGCTCTTCGACAAGTCCCTAATAAAGATAGAGACAGAAATATTGATATGATCAATCAAATTCGGGATTCATTGGCTATTATGGGTGACAATAGTACGGCCTTTAGCTTACCACAACCACATCTCCAGCGGACAAAGCTTTGTGACTTGAAGGATGGGGAGCTTGATCCATCATATGTGAAGAAAAGGGAGAAGCTAAAAGAGCTTGTTTCTAGTATAATCCGTCCAAAGATTGTACAAGGAAAATCTCTAAATGGGAAAGAGTTTGTTTCCTTCCTGAAGCAGATACTTGAAGCCTTGAACAAGGGAGAGATTCCATCAACAGGTTCTCTTGTGGAGATTTTCAACAAGGACATTCTTGAAAGATGTCTTAAGTTATACAGTGAAAAGATGGCCACATTGGCTCTACCTCTTCCAGAAGGATATCTTCAAGCTTCCCATGACATGGCTAGAGGTGACGCCATGCAAGCATTCGATCAGCAACATTTTGGCCGTCACCATGCTAAGAAGTCAGTCACGCAACTGGATGAAGAAATAGATAAGGTATTTAAGAATGTCATTTTACAAAATGAATATAAATCTTCAAAGCTTTGTGAGGCACTGTACACCGATTGTGAGGACATGATGGACCAGCTTCAAGTTCTCAAGCTTCCTTCAATGGCAAAATTTAATGCAGGTCTCGAGAAATGCAATCGTACTTTTGAGCATGATTGTGTTGGACCTTCAAAAGCAAACTACGAGGGACGTATGGCAAAGATGTTGGTAAAGTCTAAGTCTCTATTTATAAAGGAGTACAACCACAGGCTTTTCAATTGGTTGGTGGCTTTCTCCCTCGTCACGGTTGTGGTTGGCCGGTTTATTATAAAGTTCATTTTGATTGAAATTGGAGGATGGTTACTTTTTATATTTCTGGAGACCTACACAAGGTTGTTTTGGTCAGCAGAGTCACTTTACTACAATCCAGTTTGGCATTTTATAGTTGCATCGTGGGAAACTCTTGTTTACAGCCCAGTCCTTGATCTTGACAGATGGGCTATCCCACTTGGTGTAATAATATCTTTTTTCATTCTATATTGGCGGTGTTATGGGAAAAAGAAACATGGATCACGGTGGCTATTACCATTATATAGCAGCAATAAAAATAGACCAAGAACAGACTAA

Protein sequence

>MsG0780040688.01.T01

MSVCWNRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVDEALRQVPNKDRDRNIDMINQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDLKDGELDPSYVKKREKLKELVSSIIRPKIVQGKSLNGKEFVSFLKQILEALNKGEIPSTGSLVEIFNKDILERCLKLYSEKMATLALPLPEGYLQASHDMARGDAMQAFDQQHFGRHHAKKSVTQLDEEIDKVFKNVILQNEYKSSKLCEALYTDCEDMMDQLQVLKLPSMAKFNAGLEKCNRTFEHDCVGPSKANYEGRMAKMLVKSKSLFIKEYNHRLFNWLVAFSLVTVVVGRFIIKFILIEIGGWLLFIFLETYTRLFWSAESLYYNPVWHFIVASWETLVYSPVLDLDRWAIPLGVIISFFILYWRCYGKKKHGSRWLLPLYSSNKNRPRTD*