Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024328.01.T01 | XP_003610972.1 | 99.584 | 481 | 2 | 0 | 1 | 481 | 1 | 481 | 0 | 992 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024328.01.T01 | Q9LPR8 | 66.119 | 487 | 154 | 7 | 1 | 481 | 1 | 482 | 0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024328.01.T01 | G7K9A5 | 99.584 | 481 | 2 | 0 | 1 | 481 | 1 | 481 | 0.0 | 992 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0580024328.01.T01 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000086.01 | MsG0580024328.01 | 0.812768 | 3.590983e-51 | 2.303031e-48 |
| MsG0180000470.01 | MsG0580024328.01 | 0.804391 | 2.209449e-49 | 1.137802e-46 |
| MsG0180000475.01 | MsG0580024328.01 | 0.813124 | 2.999491e-51 | 1.942007e-48 |
| MsG0180000814.01 | MsG0580024328.01 | 0.812991 | 3.209055e-51 | 2.070330e-48 |
| MsG0180001088.01 | MsG0580024328.01 | 0.807885 | 4.062118e-50 | 2.288960e-47 |
| MsG0180001971.01 | MsG0580024328.01 | 0.828749 | 7.563459e-55 | 7.585323e-52 |
| MsG0180002955.01 | MsG0580024328.01 | 0.801730 | 7.845334e-49 | 3.774251e-46 |
| MsG0180003574.01 | MsG0580024328.01 | 0.814221 | 1.720197e-51 | 1.147451e-48 |
| MsG0180003673.01 | MsG0580024328.01 | 0.848245 | 6.930346e-60 | 1.263832e-56 |
| MsG0180003686.01 | MsG0580024328.01 | 0.842643 | 2.281459e-58 | 3.481065e-55 |
| MsG0180003810.01 | MsG0580024328.01 | 0.821978 | 3.028021e-53 | 2.501306e-50 |
| MsG0180004465.01 | MsG0580024328.01 | 0.808029 | 3.786212e-50 | 2.141629e-47 |
| MsG0180004691.01 | MsG0580024328.01 | 0.806880 | 6.635020e-50 | 3.642430e-47 |
| MsG0180005050.01 | MsG0580024328.01 | 0.839514 | 1.513701e-57 | 2.095269e-54 |
| MsG0180005185.01 | MsG0580024328.01 | 0.817077 | 3.976634e-52 | 2.867455e-49 |
| MsG0180005398.01 | MsG0580024328.01 | 0.806170 | 9.368581e-50 | 5.050580e-47 |
| MsG0180005960.01 | MsG0580024328.01 | 0.807350 | 5.277272e-50 | 2.932629e-47 |
| MsG0180006134.01 | MsG0580024328.01 | 0.800671 | 1.291768e-48 | 6.050589e-46 |
| MsG0280006309.01 | MsG0580024328.01 | 0.829625 | 4.637210e-55 | 4.771965e-52 |
| MsG0280010702.01 | MsG0580024328.01 | 0.828572 | 8.346309e-55 | 8.328380e-52 |
| MsG0280010796.01 | MsG0580024328.01 | 0.801864 | 7.363664e-49 | 3.554878e-46 |
| MsG0280010945.01 | MsG0580024328.01 | 0.822854 | 1.895984e-53 | 1.605862e-50 |
| MsG0280011410.01 | MsG0580024328.01 | 0.819070 | 1.408893e-52 | 1.073162e-49 |
| MsG0380011669.01 | MsG0580024328.01 | 0.823648 | 1.237262e-53 | 1.071730e-50 |
| MsG0380011895.01 | MsG0580024328.01 | 0.803273 | 3.771702e-49 | 1.887308e-46 |
| MsG0380014277.01 | MsG0580024328.01 | 0.818441 | 1.956653e-52 | 1.464905e-49 |
| MsG0480018473.01 | MsG0580024328.01 | 0.816485 | 5.396527e-52 | 3.828657e-49 |
| MsG0480018778.01 | MsG0580024328.01 | 0.812605 | 3.898081e-51 | 2.489357e-48 |
| MsG0480018883.01 | MsG0580024328.01 | 0.803272 | 3.772604e-49 | 1.887732e-46 |
| MsG0480019434.01 | MsG0580024328.01 | 0.826194 | 3.101459e-54 | 2.888511e-51 |
| MsG0480019435.01 | MsG0580024328.01 | 0.818831 | 1.596633e-52 | 1.208184e-49 |
| MsG0480020322.01 | MsG0580024328.01 | 0.810215 | 1.287422e-50 | 7.714686e-48 |
| MsG0480020323.01 | MsG0580024328.01 | 0.803984 | 2.685381e-49 | 1.368599e-46 |
| MsG0480021332.01 | MsG0580024328.01 | 0.804978 | 1.666183e-49 | 8.711772e-47 |
| MsG0480021489.01 | MsG0580024328.01 | 0.804807 | 1.809445e-49 | 9.419318e-47 |
| MsG0480022068.01 | MsG0580024328.01 | 0.859769 | 3.288915e-63 | 8.786029e-60 |
| MsG0480022145.01 | MsG0580024328.01 | 0.852185 | 5.448015e-61 | 1.129338e-57 |
| MsG0480022169.01 | MsG0580024328.01 | 0.824525 | 7.701487e-54 | 6.838862e-51 |
| MsG0480022178.01 | MsG0580024328.01 | 0.811820 | 5.781730e-51 | 3.615223e-48 |
| MsG0480022750.01 | MsG0580024328.01 | 0.821597 | 3.709437e-53 | 3.031172e-50 |
| MsG0480022933.01 | MsG0580024328.01 | 0.819519 | 1.113252e-52 | 8.586180e-50 |
| MsG0480023025.01 | MsG0580024328.01 | 0.814107 | 1.823397e-51 | 1.212521e-48 |
| MsG0480023045.01 | MsG0580024328.01 | 0.813147 | 2.965930e-51 | 1.921453e-48 |
| MsG0480023251.01 | MsG0580024328.01 | 0.816954 | 4.237405e-52 | 3.045526e-49 |
| MsG0480023638.01 | MsG0580024328.01 | 0.801044 | 1.083974e-48 | 5.125861e-46 |
| MsG0480023670.01 | MsG0580024328.01 | 0.826467 | 2.669847e-54 | 2.505847e-51 |
| MsG0480023943.01 | MsG0580024328.01 | 0.824126 | 9.554675e-54 | 8.388192e-51 |
| MsG0480024005.01 | MsG0580024328.01 | 0.804561 | 2.036636e-49 | 1.053401e-46 |
| MsG0580024328.01 | MsG0580024435.01 | 0.805076 | 1.589673e-49 | 8.332291e-47 |
| MsG0580024328.01 | MsG0580024935.01 | 0.832530 | 8.968818e-56 | 1.005201e-52 |
| MsG0580024328.01 | MsG0580025758.01 | 0.828303 | 9.691674e-55 | 9.594806e-52 |
| MsG0580024328.01 | MsG0580026086.01 | 0.812992 | 3.207549e-51 | 2.069427e-48 |
| MsG0580024328.01 | MsG0580026340.01 | 0.802312 | 5.956812e-49 | 2.908743e-46 |
| MsG0580024328.01 | MsG0580026510.01 | 0.832919 | 7.182607e-56 | 8.143855e-53 |
| MsG0580024328.01 | MsG0580028918.01 | 0.830199 | 3.359676e-55 | 3.515529e-52 |
| MsG0580024328.01 | MsG0580029622.01 | 0.801476 | 8.844782e-49 | 4.228033e-46 |
| MsG0580024328.01 | MsG0680030413.01 | 0.820430 | 6.888655e-53 | 5.449568e-50 |
| MsG0580024328.01 | MsG0680031334.01 | 0.828088 | 1.091771e-54 | 1.074224e-51 |
| MsG0580024328.01 | MsG0680031377.01 | -0.827439 | 1.563804e-54 | 1.509811e-51 |
| MsG0580024328.01 | MsG0780036128.01 | 0.840069 | 1.085822e-57 | 1.529243e-54 |
| MsG0580024328.01 | MsG0780037146.01 | 0.802458 | 5.557200e-49 | 2.723580e-46 |
| MsG0580024328.01 | MsG0780038092.01 | 0.809947 | 1.470536e-50 | 8.751103e-48 |
| MsG0580024328.01 | MsG0780039143.01 | 0.824482 | 7.882756e-54 | 6.990907e-51 |
| MsG0580024328.01 | MsG0780039144.01 | 0.833726 | 4.519351e-56 | 5.249382e-53 |
| MsG0580024328.01 | MsG0780040176.01 | 0.807618 | 4.629050e-50 | 2.590343e-47 |
| MsG0580024328.01 | MsG0780040177.01 | 0.826798 | 2.225680e-54 | 2.108844e-51 |
| MsG0580024328.01 | MsG0780040559.01 | -0.804210 | 2.409936e-49 | 1.235273e-46 |
| MsG0580024328.01 | MsG0780041015.01 | -0.810218 | 1.285691e-50 | 7.704857e-48 |
| MsG0580024328.01 | MsG0780041065.01 | 0.831999 | 1.213650e-55 | 1.339173e-52 |
| MsG0580024328.01 | MsG0780041080.01 | 0.822242 | 2.629790e-53 | 2.188857e-50 |
| MsG0580024328.01 | MsG0780041187.01 | 0.835338 | 1.778442e-56 | 2.168506e-53 |
| MsG0580024328.01 | MsG0780041242.01 | 0.800354 | 1.499353e-48 | 6.966613e-46 |
| MsG0580024328.01 | MsG0880042622.01 | 0.818790 | 1.630896e-52 | 1.232713e-49 |
| MsG0580024328.01 | MsG0880042743.01 | 0.809847 | 1.545340e-50 | 9.172200e-48 |
| MsG0580024328.01 | MsG0880043172.01 | 0.805753 | 1.146573e-49 | 6.115700e-47 |
| MsG0580024328.01 | MsG0880044573.01 | 0.801976 | 6.983745e-49 | 3.380764e-46 |
| MsG0580024328.01 | MsG0880045111.01 | 0.829470 | 5.057307e-55 | 5.180720e-52 |
| MsG0580024328.01 | MsG0880045371.01 | 0.810276 | 1.249231e-50 | 7.497950e-48 |
| MsG0580024328.01 | MsG0880045387.01 | 0.801334 | 9.457043e-49 | 4.504492e-46 |
| MsG0580024328.01 | MsG0880045736.01 | 0.821070 | 4.908106e-53 | 3.952814e-50 |
| MsG0580024328.01 | MsG0880045783.01 | 0.817779 | 2.763058e-52 | 2.031118e-49 |
| MsG0580024328.01 | MsG0880045992.01 | 0.802783 | 4.763202e-49 | 2.353908e-46 |
| MsG0580024328.01 | MsG0880046531.01 | 0.809587 | 1.758210e-50 | 1.036436e-47 |
| MsG0580024328.01 | MsG0880047045.01 | 0.827645 | 1.395411e-54 | 1.355155e-51 |
| MsG0580024328.01 | MsG0880047046.01 | 0.812786 | 3.558718e-51 | 2.283376e-48 |
| MsG0380016182.01 | MsG0580024328.01 | 0.818012 | 2.447627e-52 | 1.810725e-49 |
| MsG0380016187.01 | MsG0580024328.01 | 0.849753 | 2.641784e-60 | 5.059605e-57 |
| MsG0380016285.01 | MsG0580024328.01 | 0.833632 | 4.771709e-56 | 5.526866e-53 |
| MsG0380016391.01 | MsG0580024328.01 | 0.823736 | 1.179681e-53 | 1.024486e-50 |
| MsG0380016694.01 | MsG0580024328.01 | 0.804609 | 1.989438e-49 | 1.030295e-46 |
| MsG0380017048.01 | MsG0580024328.01 | 0.855066 | 8.096159e-62 | 1.846153e-58 |
| MsG0380017220.01 | MsG0580024328.01 | 0.814971 | 1.174094e-51 | 7.992044e-49 |
| MsG0380017293.01 | MsG0580024328.01 | 0.800386 | 1.477118e-48 | 6.868795e-46 |
| MsG0380017495.01 | MsG0580024328.01 | 0.825189 | 5.367436e-54 | 4.858122e-51 |
| MsG0380017543.01 | MsG0580024328.01 | 0.854711 | 1.026015e-61 | 2.312195e-58 |
| MsG0380017551.01 | MsG0580024328.01 | -0.841821 | 3.765480e-58 | 5.599263e-55 |
| MsG0480018236.01 | MsG0580024328.01 | 0.841899 | 3.590559e-58 | 5.352104e-55 |
| MsG0280006770.01 | MsG0580024328.01 | 0.822747 | 2.007991e-53 | 1.695639e-50 |
| MsG0280007072.01 | MsG0580024328.01 | 0.807051 | 6.106166e-50 | 3.366928e-47 |
| MsG0280007636.01 | MsG0580024328.01 | 0.805780 | 1.131654e-49 | 6.040107e-47 |
| MsG0280007727.01 | MsG0580024328.01 | 0.810637 | 1.044070e-50 | 6.326944e-48 |
| MsG0280007864.01 | MsG0580024328.01 | -0.814529 | 1.470642e-51 | 9.892485e-49 |
| MsG0280008112.01 | MsG0580024328.01 | 0.848687 | 5.228840e-60 | 9.673758e-57 |
| MsG0280008113.01 | MsG0580024328.01 | 0.842254 | 2.892359e-58 | 4.360159e-55 |
| MsG0280008114.01 | MsG0580024328.01 | 0.844368 | 7.892766e-59 | 1.271338e-55 |
| MsG0280008363.01 | MsG0580024328.01 | 0.802413 | 5.676343e-49 | 2.778911e-46 |
| MsG0280009024.01 | MsG0580024328.01 | 0.824735 | 6.869786e-54 | 6.137928e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024328.01.T01 | MTR_5g009080 | 99.584 | 481 | 2 | 0 | 1 | 481 | 1 | 481 | 0.0 | 992 |
| MsG0580024328.01.T01 | MTR_4g076140 | 75.783 | 479 | 108 | 6 | 4 | 481 | 1 | 472 | 0.0 | 742 |
| MsG0580024328.01.T01 | MTR_3g022830 | 54.139 | 447 | 193 | 5 | 34 | 480 | 4 | 438 | 1.40e-169 | 485 |
| MsG0580024328.01.T01 | MTR_7g027190 | 34.658 | 453 | 209 | 7 | 45 | 478 | 289 | 673 | 8.12e-83 | 270 |
| MsG0580024328.01.T01 | MTR_1g106590 | 89.831 | 118 | 12 | 0 | 50 | 167 | 124 | 241 | 1.74e-67 | 220 |
| MsG0580024328.01.T01 | MTR_1g106590 | 90.722 | 97 | 9 | 0 | 286 | 382 | 244 | 340 | 5.51e-39 | 144 |
| MsG0580024328.01.T01 | MTR_8g442410 | 30.455 | 440 | 236 | 10 | 49 | 479 | 148 | 526 | 1.08e-59 | 205 |
| MsG0580024328.01.T01 | MTR_5g097480 | 30.254 | 433 | 233 | 8 | 53 | 478 | 174 | 544 | 1.34e-59 | 205 |
| MsG0580024328.01.T01 | MTR_1g029420 | 28.605 | 430 | 240 | 7 | 55 | 478 | 224 | 592 | 1.00e-53 | 190 |
| MsG0580024328.01.T01 | MTR_3g089055 | 28.140 | 430 | 242 | 7 | 55 | 478 | 197 | 565 | 2.56e-52 | 186 |
| MsG0580024328.01.T01 | MTR_3g089055 | 28.140 | 430 | 242 | 7 | 55 | 478 | 202 | 570 | 2.64e-52 | 186 |
| MsG0580024328.01.T01 | MTR_4g064160 | 28.241 | 432 | 236 | 7 | 56 | 477 | 316 | 683 | 1.95e-47 | 174 |
| MsG0580024328.01.T01 | MTR_4g064120 | 26.185 | 443 | 259 | 6 | 42 | 475 | 240 | 623 | 1.00e-46 | 171 |
| MsG0580024328.01.T01 | MTR_4g064150 | 27.419 | 434 | 247 | 7 | 53 | 477 | 358 | 732 | 2.49e-46 | 172 |
| MsG0580024328.01.T01 | MTR_4g104020 | 27.107 | 439 | 251 | 13 | 50 | 479 | 143 | 521 | 4.69e-46 | 168 |
| MsG0580024328.01.T01 | MTR_4g064200 | 26.852 | 432 | 246 | 7 | 53 | 477 | 281 | 649 | 8.02e-46 | 169 |
| MsG0580024328.01.T01 | MTR_3g022580 | 42.857 | 203 | 75 | 5 | 279 | 481 | 25 | 186 | 4.36e-45 | 156 |
| MsG0580024328.01.T01 | MTR_4g064180 | 25.959 | 443 | 260 | 7 | 42 | 475 | 240 | 623 | 6.75e-44 | 164 |
| MsG0580024328.01.T01 | MTR_2g097310 | 26.757 | 441 | 257 | 9 | 42 | 477 | 258 | 637 | 6.30e-43 | 161 |
| MsG0580024328.01.T01 | MTR_4g133660 | 26.512 | 430 | 246 | 10 | 56 | 477 | 175 | 542 | 7.16e-42 | 157 |
| MsG0580024328.01.T01 | MTR_2g097390 | 26.577 | 444 | 256 | 10 | 41 | 477 | 260 | 640 | 7.98e-42 | 158 |
| MsG0580024328.01.T01 | MTR_7g062120 | 26.807 | 429 | 248 | 7 | 56 | 478 | 372 | 740 | 8.08e-42 | 159 |
| MsG0580024328.01.T01 | MTR_1g069725 | 28.899 | 436 | 236 | 11 | 48 | 480 | 101 | 465 | 1.08e-41 | 155 |
| MsG0580024328.01.T01 | MTR_2g097350 | 26.077 | 441 | 260 | 9 | 42 | 477 | 260 | 639 | 1.03e-39 | 152 |
| MsG0580024328.01.T01 | MTR_7g074650 | 41.146 | 192 | 108 | 2 | 60 | 249 | 442 | 630 | 2.49e-39 | 152 |
| MsG0580024328.01.T01 | MTR_7g074650 | 38.255 | 149 | 87 | 3 | 333 | 478 | 646 | 792 | 3.03e-23 | 103 |
| MsG0580024328.01.T01 | MTR_4g077760 | 26.147 | 436 | 242 | 9 | 53 | 478 | 190 | 555 | 4.53e-38 | 146 |
| MsG0580024328.01.T01 | MTR_2g034280 | 27.056 | 462 | 256 | 12 | 33 | 478 | 179 | 575 | 1.39e-37 | 145 |
| MsG0580024328.01.T01 | MTR_4g102790 | 33.023 | 215 | 140 | 1 | 49 | 259 | 285 | 499 | 4.38e-37 | 145 |
| MsG0580024328.01.T01 | MTR_4g102790 | 32.692 | 156 | 98 | 5 | 328 | 477 | 507 | 661 | 2.81e-19 | 91.3 |
| MsG0580024328.01.T01 | MTR_3g065980 | 34.685 | 222 | 131 | 3 | 44 | 260 | 160 | 372 | 3.02e-36 | 141 |
| MsG0580024328.01.T01 | MTR_3g065980 | 37.576 | 165 | 90 | 3 | 327 | 478 | 376 | 540 | 6.93e-30 | 122 |
| MsG0580024328.01.T01 | MTR_2g097463 | 27.400 | 427 | 249 | 10 | 53 | 477 | 287 | 654 | 3.82e-35 | 139 |
| MsG0580024328.01.T01 | MTR_2g097380 | 24.940 | 417 | 222 | 9 | 64 | 477 | 232 | 560 | 4.43e-35 | 138 |
| MsG0580024328.01.T01 | MTR_2g089100 | 24.943 | 441 | 274 | 9 | 50 | 477 | 46 | 442 | 6.87e-34 | 133 |
| MsG0580024328.01.T01 | MTR_2g082090 | 35.238 | 210 | 129 | 2 | 53 | 256 | 209 | 417 | 1.62e-31 | 128 |
| MsG0580024328.01.T01 | MTR_2g082090 | 41.611 | 149 | 86 | 1 | 329 | 477 | 431 | 578 | 3.15e-29 | 121 |
| MsG0580024328.01.T01 | MTR_3g022005 | 54.082 | 98 | 44 | 1 | 384 | 481 | 32 | 128 | 2.59e-31 | 117 |
| MsG0580024328.01.T01 | MTR_5g094450 | 28.972 | 214 | 144 | 3 | 53 | 258 | 158 | 371 | 5.48e-29 | 120 |
| MsG0580024328.01.T01 | MTR_5g094450 | 36.879 | 141 | 88 | 1 | 338 | 478 | 393 | 532 | 7.11e-24 | 105 |
| MsG0580024328.01.T01 | MTR_3g027430 | 48.305 | 118 | 40 | 1 | 139 | 256 | 184 | 280 | 1.60e-28 | 115 |
| MsG0580024328.01.T01 | MTR_2g034260 | 24.675 | 462 | 265 | 12 | 33 | 478 | 190 | 584 | 2.80e-28 | 118 |
| MsG0580024328.01.T01 | MTR_3g056110 | 27.645 | 293 | 187 | 7 | 53 | 329 | 172 | 455 | 1.54e-26 | 113 |
| MsG0580024328.01.T01 | MTR_3g056110 | 36.170 | 141 | 89 | 1 | 338 | 478 | 403 | 542 | 3.22e-25 | 108 |
| MsG0580024328.01.T01 | MTR_2g097410 | 29.048 | 210 | 142 | 2 | 56 | 258 | 371 | 580 | 3.99e-26 | 112 |
| MsG0580024328.01.T01 | MTR_2g097410 | 28.188 | 149 | 107 | 0 | 329 | 477 | 592 | 740 | 2.46e-18 | 88.6 |
| MsG0580024328.01.T01 | MTR_2g026250 | 29.817 | 218 | 142 | 4 | 57 | 267 | 229 | 442 | 6.66e-26 | 111 |
| MsG0580024328.01.T01 | MTR_2g026250 | 34.507 | 142 | 92 | 1 | 338 | 479 | 457 | 597 | 7.93e-21 | 95.9 |
| MsG0580024328.01.T01 | MTR_7g109580 | 25.877 | 456 | 256 | 13 | 36 | 478 | 168 | 554 | 1.09e-25 | 110 |
| MsG0580024328.01.T01 | MTR_5g058860 | 25.974 | 462 | 248 | 14 | 41 | 477 | 104 | 496 | 1.24e-25 | 110 |
| MsG0580024328.01.T01 | MTR_2g097467 | 31.579 | 209 | 133 | 2 | 56 | 258 | 289 | 493 | 1.56e-25 | 110 |
| MsG0580024328.01.T01 | MTR_2g097467 | 30.201 | 149 | 104 | 0 | 329 | 477 | 505 | 653 | 1.13e-17 | 86.3 |
| MsG0580024328.01.T01 | MTR_5g015950 | 24.658 | 438 | 287 | 11 | 56 | 477 | 35 | 445 | 1.79e-25 | 108 |
| MsG0580024328.01.T01 | MTR_3g053270 | 24.658 | 438 | 287 | 11 | 56 | 477 | 35 | 445 | 1.79e-25 | 108 |
| MsG0580024328.01.T01 | MTR_2g097473 | 31.579 | 209 | 133 | 2 | 56 | 258 | 289 | 493 | 4.16e-25 | 109 |
| MsG0580024328.01.T01 | MTR_2g097473 | 29.530 | 149 | 105 | 0 | 329 | 477 | 505 | 653 | 2.41e-16 | 82.4 |
| MsG0580024328.01.T01 | MTR_4g095500 | 23.729 | 472 | 285 | 12 | 38 | 477 | 39 | 467 | 4.71e-25 | 108 |
| MsG0580024328.01.T01 | MTR_4g097080 | 29.091 | 220 | 132 | 4 | 55 | 258 | 132 | 343 | 6.25e-25 | 107 |
| MsG0580024328.01.T01 | MTR_4g097080 | 30.247 | 162 | 106 | 4 | 322 | 478 | 344 | 503 | 2.14e-13 | 72.8 |
| MsG0580024328.01.T01 | MTR_5g015490 | 29.493 | 217 | 145 | 3 | 50 | 258 | 108 | 324 | 1.01e-23 | 104 |
| MsG0580024328.01.T01 | MTR_5g015490 | 29.032 | 155 | 103 | 4 | 329 | 478 | 338 | 490 | 5.15e-11 | 65.1 |
| MsG0580024328.01.T01 | MTR_7g057230 | 27.586 | 348 | 176 | 10 | 141 | 477 | 374 | 656 | 1.05e-23 | 105 |
| MsG0580024328.01.T01 | MTR_4g076020 | 29.534 | 193 | 120 | 4 | 60 | 249 | 88 | 267 | 2.66e-22 | 99.8 |
| MsG0580024328.01.T01 | MTR_4g076020 | 39.456 | 147 | 87 | 2 | 332 | 478 | 285 | 429 | 3.83e-21 | 96.3 |
| MsG0580024328.01.T01 | MTR_2g034250 | 33.974 | 156 | 94 | 3 | 328 | 478 | 434 | 585 | 3.25e-22 | 100 |
| MsG0580024328.01.T01 | MTR_2g034250 | 29.032 | 248 | 160 | 6 | 33 | 264 | 186 | 433 | 5.79e-20 | 93.2 |
| MsG0580024328.01.T01 | MTR_8g093070 | 24.598 | 435 | 243 | 16 | 53 | 477 | 136 | 495 | 9.15e-22 | 98.6 |
| MsG0580024328.01.T01 | MTR_2g099110 | 26.512 | 215 | 148 | 4 | 47 | 252 | 65 | 278 | 1.53e-20 | 94.4 |
| MsG0580024328.01.T01 | MTR_3g021320 | 38.158 | 152 | 64 | 3 | 156 | 307 | 1 | 122 | 1.84e-20 | 87.4 |
| MsG0580024328.01.T01 | MTR_6g047750 | 23.570 | 437 | 249 | 12 | 57 | 478 | 296 | 662 | 1.81e-19 | 92.0 |
| MsG0580024328.01.T01 | MTR_1g096030 | 27.778 | 270 | 157 | 9 | 50 | 288 | 74 | 336 | 4.06e-19 | 90.1 |
| MsG0580024328.01.T01 | MTR_1g096030 | 29.143 | 175 | 106 | 4 | 323 | 479 | 286 | 460 | 7.45e-19 | 89.4 |
| MsG0580024328.01.T01 | MTR_4g026485 | 22.430 | 428 | 255 | 11 | 57 | 479 | 270 | 625 | 5.85e-19 | 90.5 |
| MsG0580024328.01.T01 | MTR_3g072710 | 28.571 | 245 | 135 | 8 | 41 | 255 | 105 | 339 | 6.37e-19 | 89.7 |
| MsG0580024328.01.T01 | MTR_3g072710 | 31.707 | 164 | 98 | 5 | 321 | 477 | 343 | 499 | 1.04e-13 | 73.6 |
| MsG0580024328.01.T01 | MTR_1g086970 | 29.570 | 186 | 117 | 5 | 297 | 478 | 303 | 478 | 6.88e-18 | 86.7 |
| MsG0580024328.01.T01 | MTR_1g086970 | 29.388 | 245 | 154 | 9 | 36 | 263 | 84 | 326 | 1.53e-13 | 73.2 |
| MsG0580024328.01.T01 | MTR_0092s0100 | 30.303 | 165 | 113 | 1 | 33 | 197 | 349 | 511 | 3.86e-13 | 72.4 |
| MsG0580024328.01.T01 | MTR_0092s0100 | 30.303 | 165 | 113 | 1 | 33 | 197 | 352 | 514 | 3.97e-13 | 72.4 |
| MsG0580024328.01.T01 | MTR_8g020840 | 23.409 | 440 | 245 | 16 | 50 | 466 | 165 | 535 | 6.95e-13 | 71.2 |
| MsG0580024328.01.T01 | MTR_3g025340 | 49.180 | 61 | 31 | 0 | 114 | 174 | 9 | 69 | 8.66e-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024328.01.T01 | AT1G50420 | 66.119 | 487 | 154 | 7 | 1 | 481 | 1 | 482 | 0.0 | 652 |
| MsG0580024328.01.T01 | AT3G54220 | 33.258 | 442 | 218 | 10 | 45 | 480 | 282 | 652 | 9.16e-61 | 210 |
| MsG0580024328.01.T01 | AT1G50600 | 29.476 | 458 | 251 | 10 | 31 | 478 | 131 | 526 | 8.22e-55 | 192 |
| MsG0580024328.01.T01 | AT1G50600 | 29.476 | 458 | 251 | 10 | 31 | 478 | 206 | 601 | 2.44e-54 | 192 |
| MsG0580024328.01.T01 | AT1G50600 | 29.476 | 458 | 251 | 10 | 31 | 478 | 202 | 597 | 2.56e-54 | 192 |
| MsG0580024328.01.T01 | AT1G21450 | 29.002 | 431 | 238 | 5 | 55 | 478 | 224 | 593 | 3.65e-54 | 191 |
| MsG0580024328.01.T01 | AT4G17230 | 26.622 | 447 | 259 | 7 | 39 | 478 | 141 | 525 | 1.11e-46 | 170 |
| MsG0580024328.01.T01 | AT4G17230 | 26.622 | 447 | 259 | 7 | 39 | 478 | 141 | 525 | 1.11e-46 | 170 |
| MsG0580024328.01.T01 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 143 | 528 | 1.22e-43 | 161 |
| MsG0580024328.01.T01 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 143 | 528 | 1.22e-43 | 161 |
| MsG0580024328.01.T01 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 307 | 692 | 7.07e-43 | 161 |
| MsG0580024328.01.T01 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 308 | 693 | 7.19e-43 | 161 |
| MsG0580024328.01.T01 | AT3G46600 | 26.097 | 433 | 253 | 6 | 55 | 481 | 3 | 374 | 3.82e-41 | 151 |
| MsG0580024328.01.T01 | AT5G59450 | 25.688 | 436 | 253 | 9 | 53 | 478 | 224 | 598 | 2.78e-40 | 153 |
| MsG0580024328.01.T01 | AT1G07530 | 25.408 | 429 | 253 | 7 | 56 | 477 | 396 | 764 | 3.07e-40 | 154 |
| MsG0580024328.01.T01 | AT3G46600 | 26.097 | 433 | 253 | 6 | 55 | 481 | 179 | 550 | 3.12e-40 | 152 |
| MsG0580024328.01.T01 | AT3G46600 | 26.097 | 433 | 253 | 6 | 55 | 481 | 211 | 582 | 6.14e-40 | 152 |
| MsG0580024328.01.T01 | AT2G29065 | 25.513 | 439 | 247 | 10 | 56 | 477 | 252 | 627 | 1.25e-38 | 149 |
| MsG0580024328.01.T01 | AT1G66350 | 35.616 | 219 | 132 | 4 | 44 | 260 | 143 | 354 | 4.69e-36 | 140 |
| MsG0580024328.01.T01 | AT1G66350 | 37.179 | 156 | 93 | 2 | 327 | 481 | 358 | 509 | 5.01e-31 | 125 |
| MsG0580024328.01.T01 | AT1G14920 | 36.161 | 224 | 129 | 4 | 44 | 260 | 160 | 376 | 1.63e-34 | 136 |
| MsG0580024328.01.T01 | AT1G14920 | 34.868 | 152 | 95 | 2 | 328 | 478 | 381 | 529 | 9.31e-27 | 113 |
| MsG0580024328.01.T01 | AT2G01570 | 35.683 | 227 | 126 | 5 | 44 | 260 | 212 | 428 | 2.51e-34 | 136 |
| MsG0580024328.01.T01 | AT2G01570 | 37.500 | 152 | 91 | 3 | 328 | 478 | 433 | 581 | 4.91e-27 | 114 |
| MsG0580024328.01.T01 | AT5G17490 | 34.404 | 218 | 132 | 4 | 47 | 260 | 151 | 361 | 3.20e-34 | 135 |
| MsG0580024328.01.T01 | AT5G17490 | 38.562 | 153 | 92 | 2 | 327 | 478 | 365 | 516 | 2.00e-27 | 115 |
| MsG0580024328.01.T01 | AT5G48150 | 28.975 | 283 | 189 | 4 | 57 | 329 | 123 | 403 | 9.86e-34 | 133 |
| MsG0580024328.01.T01 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.08e-26 | 113 |
| MsG0580024328.01.T01 | AT5G48150 | 28.975 | 283 | 189 | 4 | 57 | 329 | 123 | 403 | 9.86e-34 | 133 |
| MsG0580024328.01.T01 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.08e-26 | 113 |
| MsG0580024328.01.T01 | AT5G48150 | 28.975 | 283 | 189 | 4 | 57 | 329 | 123 | 403 | 9.86e-34 | 133 |
| MsG0580024328.01.T01 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.08e-26 | 113 |
| MsG0580024328.01.T01 | AT5G48150 | 28.975 | 283 | 189 | 4 | 57 | 329 | 123 | 403 | 9.86e-34 | 133 |
| MsG0580024328.01.T01 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.08e-26 | 113 |
| MsG0580024328.01.T01 | AT5G66770 | 27.397 | 438 | 236 | 13 | 53 | 478 | 217 | 584 | 3.48e-33 | 132 |
| MsG0580024328.01.T01 | AT3G03450 | 32.287 | 223 | 142 | 4 | 44 | 260 | 171 | 390 | 1.83e-32 | 130 |
| MsG0580024328.01.T01 | AT3G03450 | 39.355 | 155 | 92 | 2 | 325 | 478 | 392 | 545 | 2.76e-31 | 127 |
| MsG0580024328.01.T01 | AT1G63100 | 32.110 | 218 | 139 | 3 | 48 | 259 | 244 | 458 | 6.00e-32 | 129 |
| MsG0580024328.01.T01 | AT1G63100 | 36.196 | 163 | 91 | 3 | 328 | 477 | 466 | 628 | 9.06e-25 | 108 |
| MsG0580024328.01.T01 | AT1G63100 | 32.110 | 218 | 139 | 3 | 48 | 259 | 269 | 483 | 6.65e-32 | 129 |
| MsG0580024328.01.T01 | AT1G63100 | 36.196 | 163 | 91 | 3 | 328 | 477 | 491 | 653 | 1.26e-24 | 107 |
| MsG0580024328.01.T01 | AT5G41920 | 32.338 | 201 | 132 | 3 | 53 | 249 | 40 | 240 | 1.31e-31 | 125 |
| MsG0580024328.01.T01 | AT5G41920 | 36.774 | 155 | 91 | 3 | 327 | 480 | 254 | 402 | 1.92e-20 | 93.6 |
| MsG0580024328.01.T01 | AT2G37650 | 24.186 | 430 | 256 | 7 | 56 | 478 | 347 | 713 | 6.15e-31 | 127 |
| MsG0580024328.01.T01 | AT2G37650 | 24.186 | 430 | 256 | 7 | 56 | 478 | 335 | 701 | 8.98e-31 | 126 |
| MsG0580024328.01.T01 | AT2G04890 | 33.491 | 212 | 136 | 3 | 56 | 267 | 53 | 259 | 1.12e-30 | 123 |
| MsG0580024328.01.T01 | AT2G04890 | 40.000 | 150 | 89 | 1 | 329 | 478 | 265 | 413 | 8.87e-28 | 115 |
| MsG0580024328.01.T01 | AT5G52510 | 25.397 | 441 | 233 | 11 | 61 | 478 | 273 | 640 | 3.98e-30 | 124 |
| MsG0580024328.01.T01 | AT1G55580 | 36.184 | 152 | 96 | 1 | 328 | 478 | 294 | 445 | 3.59e-28 | 117 |
| MsG0580024328.01.T01 | AT1G55580 | 24.375 | 320 | 197 | 7 | 52 | 329 | 40 | 356 | 1.88e-14 | 75.9 |
| MsG0580024328.01.T01 | AT3G49950 | 24.831 | 443 | 255 | 12 | 52 | 477 | 26 | 407 | 5.89e-25 | 107 |
| MsG0580024328.01.T01 | AT2G29060 | 29.245 | 212 | 141 | 3 | 56 | 259 | 321 | 531 | 4.52e-24 | 106 |
| MsG0580024328.01.T01 | AT2G29060 | 27.273 | 154 | 103 | 3 | 329 | 477 | 542 | 691 | 2.04e-15 | 79.3 |
| MsG0580024328.01.T01 | AT2G29060 | 29.245 | 212 | 141 | 3 | 56 | 259 | 284 | 494 | 5.66e-24 | 105 |
| MsG0580024328.01.T01 | AT2G29060 | 27.273 | 154 | 103 | 3 | 329 | 477 | 505 | 654 | 1.72e-15 | 79.7 |
| MsG0580024328.01.T01 | AT4G37650 | 26.432 | 227 | 135 | 4 | 56 | 258 | 146 | 364 | 1.51e-22 | 100 |
| MsG0580024328.01.T01 | AT4G37650 | 26.415 | 159 | 107 | 3 | 329 | 478 | 372 | 529 | 6.33e-11 | 65.1 |
| MsG0580024328.01.T01 | AT4G08250 | 29.596 | 223 | 139 | 7 | 47 | 255 | 98 | 316 | 4.26e-20 | 93.2 |
| MsG0580024328.01.T01 | AT3G50650 | 30.876 | 217 | 133 | 4 | 58 | 267 | 177 | 383 | 9.93e-20 | 92.4 |
| MsG0580024328.01.T01 | AT3G50650 | 28.859 | 149 | 99 | 3 | 337 | 478 | 394 | 542 | 1.85e-13 | 73.2 |
Find 92 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAATTCTTGTGGAATTTA+AGG | 0.089377 | 5:+3450107 | None:intergenic |
| TATGCTTTCTGAAGAAATTA+TGG | 0.230947 | 5:-3450085 | MsG0580024328.01.T01:CDS |
| TTTGAGTTTCTTGACATAAT+AGG | 0.254589 | 5:+3449637 | None:intergenic |
| TGCAGCATTGTTTGATTGTT+TGG | 0.259936 | 5:-3449347 | MsG0580024328.01.T01:CDS |
| CAGCTTCTTCAGAAAGCTTA+TGG | 0.264058 | 5:+3449827 | None:intergenic |
| TCATCAGCAGAAAGAGGTTT+TGG | 0.271986 | 5:-3449860 | MsG0580024328.01.T01:CDS |
| AACATACCATAATAGCTTAA+AGG | 0.277960 | 5:+3449157 | None:intergenic |
| ACAATGCTGCATAAGAATAT+AGG | 0.281076 | 5:+3449359 | None:intergenic |
| TCAAGCTATTGTTGAATCTA+TGG | 0.285430 | 5:-3450004 | MsG0580024328.01.T01:CDS |
| TGCTAAGAACAGGGTTGAAT+TGG | 0.312189 | 5:+3449785 | None:intergenic |
| CTCAAATGAGGAGGACCTTC+AGG | 0.312197 | 5:+3449895 | None:intergenic |
| ATCTATGGAAGGTGAGAAAA+TGG | 0.335503 | 5:-3449989 | MsG0580024328.01.T01:CDS |
| TCTGCAGTTACATTCCCTTT+TGG | 0.339325 | 5:-3449695 | MsG0580024328.01.T01:CDS |
| AACATCCCTAGAGAGATTAA+AGG | 0.354098 | 5:-3449308 | MsG0580024328.01.T01:CDS |
| AAGCTATTATGGTATGTTGC+AGG | 0.357915 | 5:-3449152 | MsG0580024328.01.T01:CDS |
| AATCACCTAATGATGTGTTT+TGG | 0.364016 | 5:+3449581 | None:intergenic |
| TAGTAACTTGCTGGCAAGAT+AGG | 0.366004 | 5:-3449066 | MsG0580024328.01.T01:CDS |
| CAATGCTGCATAAGAATATA+GGG | 0.366018 | 5:+3449360 | None:intergenic |
| GACAAACTTCGTGTGAAAAC+CGG | 0.371883 | 5:-3449742 | MsG0580024328.01.T01:CDS |
| AATGTGCCTTTAAGCTATTA+TGG | 0.377946 | 5:-3449163 | MsG0580024328.01.T01:CDS |
| AGACTTGATTCGTGTGGATT+TGG | 0.381293 | 5:-3449187 | MsG0580024328.01.T01:CDS |
| ATGAACCAAAACACATCATT+AGG | 0.381360 | 5:-3449586 | MsG0580024328.01.T01:CDS |
| TCACCTAGCATAGGAGGAAT+AGG | 0.416008 | 5:-3450372 | MsG0580024328.01.T01:CDS |
| TATAGAATGAGAGAAGAAAA+TGG | 0.416830 | 5:-3449094 | MsG0580024328.01.T01:CDS |
| CTGATAGGATACTTAAAACT+TGG | 0.427400 | 5:-3450146 | MsG0580024328.01.T01:CDS |
| AGAAGGTTTCTACAGAGTTA+TGG | 0.432910 | 5:-3449127 | MsG0580024328.01.T01:CDS |
| TCACTGAAGCACTTGCTGAT+AGG | 0.433040 | 5:-3450161 | MsG0580024328.01.T01:CDS |
| ATGGTTGTGTAGTAACTTGC+TGG | 0.448692 | 5:-3449075 | MsG0580024328.01.T01:CDS |
| TCGGTTACAACCATGACTTT+TGG | 0.460163 | 5:+3449433 | None:intergenic |
| TCACAACGGTTCAACATTGA+TGG | 0.461983 | 5:-3449398 | MsG0580024328.01.T01:CDS |
| TTGCACAAGTGATTAACAAA+TGG | 0.462673 | 5:+3450289 | None:intergenic |
| CAACAACAGCTTGGAGAGCT+AGG | 0.464849 | 5:-3449033 | MsG0580024328.01.T01:CDS |
| TCTCAACCTTTAATCTCTCT+AGG | 0.466126 | 5:+3449302 | None:intergenic |
| TGTGCAAACCATGTAGCTTC+TGG | 0.466387 | 5:-3450273 | MsG0580024328.01.T01:CDS |
| ATTCATCATCCAAGGCCAAA+AGG | 0.470579 | 5:+3449680 | None:intergenic |
| GATGATGTTGAATCGGGACT+TGG | 0.470973 | 5:+3449526 | None:intergenic |
| GTTGTGATTCGAGTCCTGTT+CGG | 0.477667 | 5:+3449414 | None:intergenic |
| CAAGACTACCAGAAGCTACA+TGG | 0.479369 | 5:+3450265 | None:intergenic |
| GAATCTATGTTACAAGAAGA+AGG | 0.480629 | 5:-3450447 | MsG0580024328.01.T01:CDS |
| AGAATTGAAATCTGAGGAAA+GGG | 0.483022 | 5:-3450325 | MsG0580024328.01.T01:CDS |
| ATATATGCCACCTTCAAGAA+AGG | 0.483743 | 5:+3450036 | None:intergenic |
| ATTATGTCAAGAAACTCAAA+TGG | 0.483850 | 5:-3449634 | MsG0580024328.01.T01:CDS |
| CCTCCTCATTTGAGAATCAC+AGG | 0.490720 | 5:-3449886 | MsG0580024328.01.T01:CDS |
| AAGGTTGAGAAGATGCTGTT+TGG | 0.498109 | 5:-3449289 | MsG0580024328.01.T01:CDS |
| AGAAAGCATAATAATTCTTG+TGG | 0.500494 | 5:+3450098 | None:intergenic |
| CTCTGCATAGTGTCTCCATC+AGG | 0.502156 | 5:+3450198 | None:intergenic |
| AGTCATGGTTGTAACCGAAC+AGG | 0.503090 | 5:-3449428 | MsG0580024328.01.T01:CDS |
| CGACGATGATGATGTTGAAT+CGG | 0.503259 | 5:+3449519 | None:intergenic |
| GCTAGGTGAAACTGACATCA+TGG | 0.505670 | 5:+3450386 | None:intergenic |
| GAGAATTGAAATCTGAGGAA+AGG | 0.506938 | 5:-3450326 | MsG0580024328.01.T01:CDS |
| TCTCTACTAAGCCATGGATA+AGG | 0.507017 | 5:+3450345 | None:intergenic |
| AGGATACTTAAAACTTGGCC+TGG | 0.515401 | 5:-3450141 | MsG0580024328.01.T01:CDS |
| CTACAGAGTTATGGTTGTGA+GGG | 0.516522 | 5:-3449118 | MsG0580024328.01.T01:CDS |
| TCACAGCTTGCAACTCCTGA+TGG | 0.516747 | 5:-3450213 | MsG0580024328.01.T01:CDS |
| TTCATCATCCAAGGCCAAAA+GGG | 0.519127 | 5:+3449681 | None:intergenic |
| TTCAATTCTCTACTAAGCCA+TGG | 0.520245 | 5:+3450339 | None:intergenic |
| CTCAACCTTTAATCTCTCTA+GGG | 0.522051 | 5:+3449303 | None:intergenic |
| TATATGCCACCTTCAAGAAA+GGG | 0.525767 | 5:+3450037 | None:intergenic |
| TTGTGAAGGAGCTGAAAGAA+AGG | 0.532875 | 5:-3449242 | MsG0580024328.01.T01:CDS |
| TTTAAGGCTCTGTGAAGTCC+AGG | 0.534372 | 5:+3450123 | None:intergenic |
| AAAAGAGCAATCCATTGTGC+AGG | 0.535750 | 5:+3449937 | None:intergenic |
| AGGGATTCATCAGCAGAAAG+AGG | 0.542783 | 5:-3449866 | MsG0580024328.01.T01:CDS |
| TTCATCTGCTTCAATGAATG+TGG | 0.545313 | 5:-3449488 | MsG0580024328.01.T01:CDS |
| ACTAATTGCAAGCGCCTCGC+CGG | 0.552940 | 5:+3449723 | None:intergenic |
| GACGATGATGATGTTGAATC+GGG | 0.555408 | 5:+3449520 | None:intergenic |
| ATGGTATGTTGCAGGCAAGA+AGG | 0.557823 | 5:-3449144 | MsG0580024328.01.T01:CDS |
| GATCCTATTCCTCCTATGCT+AGG | 0.562234 | 5:+3450369 | None:intergenic |
| TCAGTTTCACCTAGCATAGG+AGG | 0.562988 | 5:-3450378 | MsG0580024328.01.T01:CDS |
| AGAACAGGGTTGAATTGGAA+TGG | 0.565131 | 5:+3449790 | None:intergenic |
| TCTACAGAGTTATGGTTGTG+AGG | 0.567967 | 5:-3449119 | MsG0580024328.01.T01:CDS |
| ATTGAAGCAGATGAAGATGC+TGG | 0.572949 | 5:+3449496 | None:intergenic |
| GAGTTTGTCACCAAAAGTCA+TGG | 0.575658 | 5:-3449443 | MsG0580024328.01.T01:CDS |
| AAGAACATAATTGCTTGTGA+AGG | 0.580873 | 5:-3449256 | MsG0580024328.01.T01:CDS |
| ATCCCTGTGATTCTCAAATG+AGG | 0.584689 | 5:+3449883 | None:intergenic |
| TGAGGATGATTCATCATCCA+AGG | 0.589137 | 5:+3449672 | None:intergenic |
| AATCTATGTTACAAGAAGAA+GGG | 0.598643 | 5:-3450446 | MsG0580024328.01.T01:CDS |
| GAATAGGATCACCTTATCCA+TGG | 0.599511 | 5:-3450356 | MsG0580024328.01.T01:CDS |
| GCTATTGTTGAATCTATGGA+AGG | 0.607832 | 5:-3450000 | MsG0580024328.01.T01:CDS |
| TGAGAAGATGCTGTTTGGTG+AGG | 0.611876 | 5:-3449284 | MsG0580024328.01.T01:CDS |
| ATGTCAGTTTCACCTAGCAT+AGG | 0.614550 | 5:-3450381 | MsG0580024328.01.T01:CDS |
| ATCATGGAAAATAACTGTAG+AGG | 0.617197 | 5:+3450402 | None:intergenic |
| CTCCTCATTTGAGAATCACA+GGG | 0.617281 | 5:-3449885 | MsG0580024328.01.T01:CDS |
| TTTCTAGCTTGCTAAGAACA+GGG | 0.622441 | 5:+3449776 | None:intergenic |
| ACGGTTCAACATTGATGGAG+AGG | 0.639461 | 5:-3449393 | MsG0580024328.01.T01:CDS |
| TAGTAGAGAATTGAAATCTG+AGG | 0.644490 | 5:-3450331 | MsG0580024328.01.T01:CDS |
| TGGATGATGAATCATCCTCA+AGG | 0.648643 | 5:-3449669 | MsG0580024328.01.T01:CDS |
| ATGCTGCTGAACCTGCACAA+TGG | 0.650823 | 5:-3449948 | MsG0580024328.01.T01:CDS |
| GAATTGAAATCTGAGGAAAG+GGG | 0.651416 | 5:-3450324 | MsG0580024328.01.T01:CDS |
| TTTATGAGACTTGATTCGTG+TGG | 0.658284 | 5:-3449193 | MsG0580024328.01.T01:CDS |
| CCTGTGATTCTCAAATGAGG+AGG | 0.663636 | 5:+3449886 | None:intergenic |
| ACTTCGTGTGAAAACCGGCG+AGG | 0.733150 | 5:-3449737 | MsG0580024328.01.T01:CDS |
| GAACAGGACTCGAATCACAA+CGG | 0.767714 | 5:-3449412 | MsG0580024328.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTCTTGTGGAATTTA+AGG | + | Chr5:3449373-3449392 | None:intergenic | 20.0% |
| !! | TGATTTACTTGAAAAAGATA+TGG | - | Chr5:3449914-3449933 | MsG0580024328.01.T01:CDS | 20.0% |
| ! | AACATACCATAATAGCTTAA+AGG | + | Chr5:3450323-3450342 | None:intergenic | 25.0% |
| ! | AATCTATGTTACAAGAAGAA+GGG | - | Chr5:3449031-3449050 | MsG0580024328.01.T01:CDS | 25.0% |
| ! | ATTATGTCAAGAAACTCAAA+TGG | - | Chr5:3449843-3449862 | MsG0580024328.01.T01:CDS | 25.0% |
| ! | CTTGAAAAAGATATGGTTAA+TGG | - | Chr5:3449921-3449940 | MsG0580024328.01.T01:CDS | 25.0% |
| ! | GACATGAAAAACTTGATAAA+TGG | - | Chr5:3450261-3450280 | MsG0580024328.01.T01:CDS | 25.0% |
| ! | TATAGAATGAGAGAAGAAAA+TGG | - | Chr5:3450383-3450402 | MsG0580024328.01.T01:CDS | 25.0% |
| !! | AGAAAGCATAATAATTCTTG+TGG | + | Chr5:3449382-3449401 | None:intergenic | 25.0% |
| !! | TATGCTTTCTGAAGAAATTA+TGG | - | Chr5:3449392-3449411 | MsG0580024328.01.T01:CDS | 25.0% |
| !! | TTTGAGTTTCTTGACATAAT+AGG | + | Chr5:3449843-3449862 | None:intergenic | 25.0% |
| AAGAACATAATTGCTTGTGA+AGG | - | Chr5:3450221-3450240 | MsG0580024328.01.T01:CDS | 30.0% | |
| AATGTGCCTTTAAGCTATTA+TGG | - | Chr5:3450314-3450333 | MsG0580024328.01.T01:CDS | 30.0% | |
| ACAATGCTGCATAAGAATAT+AGG | + | Chr5:3450121-3450140 | None:intergenic | 30.0% | |
| AGAATTGAAATCTGAGGAAA+GGG | - | Chr5:3449152-3449171 | MsG0580024328.01.T01:CDS | 30.0% | |
| ATCATGGAAAATAACTGTAG+AGG | + | Chr5:3449078-3449097 | None:intergenic | 30.0% | |
| ATGAACCAAAACACATCATT+AGG | - | Chr5:3449891-3449910 | MsG0580024328.01.T01:CDS | 30.0% | |
| CAATGCTGCATAAGAATATA+GGG | + | Chr5:3450120-3450139 | None:intergenic | 30.0% | |
| CTGATAGGATACTTAAAACT+TGG | - | Chr5:3449331-3449350 | MsG0580024328.01.T01:CDS | 30.0% | |
| GAATCTATGTTACAAGAAGA+AGG | - | Chr5:3449030-3449049 | MsG0580024328.01.T01:CDS | 30.0% | |
| TAGTAGAGAATTGAAATCTG+AGG | - | Chr5:3449146-3449165 | MsG0580024328.01.T01:CDS | 30.0% | |
| TCAAGCTATTGTTGAATCTA+TGG | - | Chr5:3449473-3449492 | MsG0580024328.01.T01:CDS | 30.0% | |
| TTGCACAAGTGATTAACAAA+TGG | + | Chr5:3449191-3449210 | None:intergenic | 30.0% | |
| ! | AATCACCTAATGATGTGTTT+TGG | + | Chr5:3449899-3449918 | None:intergenic | 30.0% |
| ! | AGAGTTTTCTCAATGCTTTA+TGG | - | Chr5:3450012-3450031 | MsG0580024328.01.T01:CDS | 30.0% |
| AACATCCCTAGAGAGATTAA+AGG | - | Chr5:3450169-3450188 | MsG0580024328.01.T01:CDS | 35.0% | |
| AAGCTATTATGGTATGTTGC+AGG | - | Chr5:3450325-3450344 | MsG0580024328.01.T01:CDS | 35.0% | |
| AGAAGGTTTCTACAGAGTTA+TGG | - | Chr5:3450350-3450369 | MsG0580024328.01.T01:CDS | 35.0% | |
| ATATATGCCACCTTCAAGAA+AGG | + | Chr5:3449444-3449463 | None:intergenic | 35.0% | |
| ATCTATGGAAGGTGAGAAAA+TGG | - | Chr5:3449488-3449507 | MsG0580024328.01.T01:CDS | 35.0% | |
| CTCAACCTTTAATCTCTCTA+GGG | + | Chr5:3450177-3450196 | None:intergenic | 35.0% | |
| GAATTGAAATCTGAGGAAAG+GGG | - | Chr5:3449153-3449172 | MsG0580024328.01.T01:CDS | 35.0% | |
| GAGAATTGAAATCTGAGGAA+AGG | - | Chr5:3449151-3449170 | MsG0580024328.01.T01:CDS | 35.0% | |
| GCTATTGTTGAATCTATGGA+AGG | - | Chr5:3449477-3449496 | MsG0580024328.01.T01:CDS | 35.0% | |
| TATATGCCACCTTCAAGAAA+GGG | + | Chr5:3449443-3449462 | None:intergenic | 35.0% | |
| TCTCAACCTTTAATCTCTCT+AGG | + | Chr5:3450178-3450197 | None:intergenic | 35.0% | |
| TGCAGCATTGTTTGATTGTT+TGG | - | Chr5:3450130-3450149 | MsG0580024328.01.T01:CDS | 35.0% | |
| TTCAATTCTCTACTAAGCCA+TGG | + | Chr5:3449141-3449160 | None:intergenic | 35.0% | |
| TTCATCTGCTTCAATGAATG+TGG | - | Chr5:3449989-3450008 | MsG0580024328.01.T01:CDS | 35.0% | |
| ! | AATAGGAGTTTTTCTCCTTG+AGG | + | Chr5:3449826-3449845 | None:intergenic | 35.0% |
| ! | TTTATGAGACTTGATTCGTG+TGG | - | Chr5:3450284-3450303 | MsG0580024328.01.T01:CDS | 35.0% |
| !! | TTTCTAGCTTGCTAAGAACA+GGG | + | Chr5:3449704-3449723 | None:intergenic | 35.0% |
| !!! | AAAGAGGTTTTGGAGCAAAT+GGG | - | Chr5:3449627-3449646 | MsG0580024328.01.T01:CDS | 35.0% |
| !!! | CTTTGTTTTCAACAACAGCT+TGG | - | Chr5:3450435-3450454 | MsG0580024328.01.T01:CDS | 35.0% |
| !!! | TGTGTTTTGGTTCATAAGCA+TGG | + | Chr5:3449886-3449905 | None:intergenic | 35.0% |
| !!! | TTTTCTAGCTTGCTAAGAAC+AGG | + | Chr5:3449705-3449724 | None:intergenic | 35.0% |
| AAAAGAGCAATCCATTGTGC+AGG | + | Chr5:3449543-3449562 | None:intergenic | 40.0% | |
| AAGGTTGAGAAGATGCTGTT+TGG | - | Chr5:3450188-3450207 | MsG0580024328.01.T01:CDS | 40.0% | |
| AGAACAGGGTTGAATTGGAA+TGG | + | Chr5:3449690-3449709 | None:intergenic | 40.0% | |
| AGGATACTTAAAACTTGGCC+TGG | - | Chr5:3449336-3449355 | MsG0580024328.01.T01:CDS | 40.0% | |
| ATCCCTGTGATTCTCAAATG+AGG | + | Chr5:3449597-3449616 | None:intergenic | 40.0% | |
| ATGTCAGTTTCACCTAGCAT+AGG | - | Chr5:3449096-3449115 | MsG0580024328.01.T01:CDS | 40.0% | |
| ATTCATCATCCAAGGCCAAA+AGG | + | Chr5:3449800-3449819 | None:intergenic | 40.0% | |
| ATTGAAGCAGATGAAGATGC+TGG | + | Chr5:3449984-3450003 | None:intergenic | 40.0% | |
| CAGCTTCTTCAGAAAGCTTA+TGG | + | Chr5:3449653-3449672 | None:intergenic | 40.0% | |
| CTACAGAGTTATGGTTGTGA+GGG | - | Chr5:3450359-3450378 | MsG0580024328.01.T01:CDS | 40.0% | |
| CTCCTCATTTGAGAATCACA+GGG | - | Chr5:3449592-3449611 | MsG0580024328.01.T01:CDS | 40.0% | |
| GAATAGGATCACCTTATCCA+TGG | - | Chr5:3449121-3449140 | MsG0580024328.01.T01:CDS | 40.0% | |
| GACAAACTTCGTGTGAAAAC+CGG | - | Chr5:3449735-3449754 | MsG0580024328.01.T01:CDS | 40.0% | |
| GAGTTTGTCACCAAAAGTCA+TGG | - | Chr5:3450034-3450053 | MsG0580024328.01.T01:CDS | 40.0% | |
| TCACAACGGTTCAACATTGA+TGG | - | Chr5:3450079-3450098 | MsG0580024328.01.T01:CDS | 40.0% | |
| TCTACAGAGTTATGGTTGTG+AGG | - | Chr5:3450358-3450377 | MsG0580024328.01.T01:CDS | 40.0% | |
| TCTCTACTAAGCCATGGATA+AGG | + | Chr5:3449135-3449154 | None:intergenic | 40.0% | |
| TGAGGATGATTCATCATCCA+AGG | + | Chr5:3449808-3449827 | None:intergenic | 40.0% | |
| TGCTAAGAACAGGGTTGAAT+TGG | + | Chr5:3449695-3449714 | None:intergenic | 40.0% | |
| TGGATGATGAATCATCCTCA+AGG | - | Chr5:3449808-3449827 | MsG0580024328.01.T01:CDS | 40.0% | |
| TTCATCATCCAAGGCCAAAA+GGG | + | Chr5:3449799-3449818 | None:intergenic | 40.0% | |
| TTGTGAAGGAGCTGAAAGAA+AGG | - | Chr5:3450235-3450254 | MsG0580024328.01.T01:CDS | 40.0% | |
| ! | AGACTTGATTCGTGTGGATT+TGG | - | Chr5:3450290-3450309 | MsG0580024328.01.T01:CDS | 40.0% |
| ! | ATGGTTGTGTAGTAACTTGC+TGG | - | Chr5:3450402-3450421 | MsG0580024328.01.T01:CDS | 40.0% |
| ! | CGACGATGATGATGTTGAAT+CGG | + | Chr5:3449961-3449980 | None:intergenic | 40.0% |
| ! | GACGATGATGATGTTGAATC+GGG | + | Chr5:3449960-3449979 | None:intergenic | 40.0% |
| ! | TCATAAGCATGGCTTTTTGC+AGG | + | Chr5:3449875-3449894 | None:intergenic | 40.0% |
| ! | TCATCAGCAGAAAGAGGTTT+TGG | - | Chr5:3449617-3449636 | MsG0580024328.01.T01:CDS | 40.0% |
| ! | TCGGTTACAACCATGACTTT+TGG | + | Chr5:3450047-3450066 | None:intergenic | 40.0% |
| ! | TCTGCAGTTACATTCCCTTT+TGG | - | Chr5:3449782-3449801 | MsG0580024328.01.T01:CDS | 40.0% |
| ! | TGAGCTTTTCCCTTTCTTGA+AGG | - | Chr5:3449431-3449450 | MsG0580024328.01.T01:CDS | 40.0% |
| !! | TAGTAACTTGCTGGCAAGAT+AGG | - | Chr5:3450411-3450430 | MsG0580024328.01.T01:CDS | 40.0% |
| !!! | GAAAGAGGTTTTGGAGCAAA+TGG | - | Chr5:3449626-3449645 | MsG0580024328.01.T01:CDS | 40.0% |
| ACGGTTCAACATTGATGGAG+AGG | - | Chr5:3450084-3450103 | MsG0580024328.01.T01:CDS | 45.0% | |
| AGGGATTCATCAGCAGAAAG+AGG | - | Chr5:3449611-3449630 | MsG0580024328.01.T01:CDS | 45.0% | |
| AGTCATGGTTGTAACCGAAC+AGG | - | Chr5:3450049-3450068 | MsG0580024328.01.T01:CDS | 45.0% | |
| ATGGTATGTTGCAGGCAAGA+AGG | - | Chr5:3450333-3450352 | MsG0580024328.01.T01:CDS | 45.0% | |
| CAAGACTACCAGAAGCTACA+TGG | + | Chr5:3449215-3449234 | None:intergenic | 45.0% | |
| CCTCCTCATTTGAGAATCAC+AGG | - | Chr5:3449591-3449610 | MsG0580024328.01.T01:CDS | 45.0% | |
| CCTGTGATTCTCAAATGAGG+AGG | + | Chr5:3449594-3449613 | None:intergenic | 45.0% | |
| GAACAGGACTCGAATCACAA+CGG | - | Chr5:3450065-3450084 | MsG0580024328.01.T01:CDS | 45.0% | |
| GATCCTATTCCTCCTATGCT+AGG | + | Chr5:3449111-3449130 | None:intergenic | 45.0% | |
| GATGATGTTGAATCGGGACT+TGG | + | Chr5:3449954-3449973 | None:intergenic | 45.0% | |
| GCTAGGTGAAACTGACATCA+TGG | + | Chr5:3449094-3449113 | None:intergenic | 45.0% | |
| GTTGTGATTCGAGTCCTGTT+CGG | + | Chr5:3450066-3450085 | None:intergenic | 45.0% | |
| TCACCTAGCATAGGAGGAAT+AGG | - | Chr5:3449105-3449124 | MsG0580024328.01.T01:CDS | 45.0% | |
| TCAGTTTCACCTAGCATAGG+AGG | - | Chr5:3449099-3449118 | MsG0580024328.01.T01:CDS | 45.0% | |
| TGTGCAAACCATGTAGCTTC+TGG | - | Chr5:3449204-3449223 | MsG0580024328.01.T01:CDS | 45.0% | |
| ! | GCTTTTCCCTTTCTTGAAGG+TGG | - | Chr5:3449434-3449453 | MsG0580024328.01.T01:CDS | 45.0% |
| ! | GTTACATTCCCTTTTGGCCT+TGG | - | Chr5:3449788-3449807 | MsG0580024328.01.T01:CDS | 45.0% |
| ! | TCACTGAAGCACTTGCTGAT+AGG | - | Chr5:3449316-3449335 | MsG0580024328.01.T01:CDS | 45.0% |
| ! | TGAGAAGATGCTGTTTGGTG+AGG | - | Chr5:3450193-3450212 | MsG0580024328.01.T01:CDS | 45.0% |
| ! | TTTAAGGCTCTGTGAAGTCC+AGG | + | Chr5:3449357-3449376 | None:intergenic | 45.0% |
| !! | GTTTTGAGTGCAAGACCTGA+AGG | - | Chr5:3449567-3449586 | MsG0580024328.01.T01:CDS | 45.0% |
| ATGCTGCTGAACCTGCACAA+TGG | - | Chr5:3449529-3449548 | MsG0580024328.01.T01:CDS | 50.0% | |
| CAACAACAGCTTGGAGAGCT+AGG | - | Chr5:3450444-3450463 | MsG0580024328.01.T01:CDS | 50.0% | |
| CTCAAATGAGGAGGACCTTC+AGG | + | Chr5:3449585-3449604 | None:intergenic | 50.0% | |
| CTCTGCATAGTGTCTCCATC+AGG | + | Chr5:3449282-3449301 | None:intergenic | 50.0% | |
| TCACAGCTTGCAACTCCTGA+TGG | - | Chr5:3449264-3449283 | MsG0580024328.01.T01:CDS | 50.0% | |
| ACTAATTGCAAGCGCCTCGC+CGG | + | Chr5:3449757-3449776 | None:intergenic | 55.0% | |
| ACTTCGTGTGAAAACCGGCG+AGG | - | Chr5:3449740-3449759 | MsG0580024328.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 3449027 | 3450472 | 3449027 | ID=MsG0580024328.01;Name=MsG0580024328.01 |
| Chr5 | mRNA | 3449027 | 3450472 | 3449027 | ID=MsG0580024328.01.T01;Parent=MsG0580024328.01;Name=MsG0580024328.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|481 |
| Chr5 | exon | 3449027 | 3450472 | 3449027 | ID=MsG0580024328.01.T01:exon:5187;Parent=MsG0580024328.01.T01 |
| Chr5 | CDS | 3449027 | 3450472 | 3449027 | ID=MsG0580024328.01.T01:cds;Parent=MsG0580024328.01.T01 |
| Gene Sequence |
| Protein sequence |
