AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026086.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026086.01.T01 MTR_5g039440 77.258 299 8 2 1 239 1 299 3.59e-160 446
MsG0580026086.01.T01 MTR_1g102335 88.095 42 5 0 56 97 17 58 1.68e-19 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026086.01.T01 AT2G02880 45.631 309 87 7 1 229 1 308 1.12e-79 242
MsG0580026086.01.T01 AT5G62270 35.878 131 83 1 110 239 251 381 3.59e-14 71.2
MsG0580026086.01.T01 AT5G62270 35.878 131 83 1 110 239 251 381 4.38e-14 71.2

Find 93 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGTATATCTTCTTCTCTT+TGG 0.205774 5:+30493811 None:intergenic
CTGTGTTGGTGGTGCCAATC+TGG 0.232756 5:-30493221 MsG0580026086.01.T01:three_prime_UTR
CCCTTCCCTCTCTTGGCATT+TGG 0.234727 5:+30493552 None:intergenic
TTAAGGACATCAAATTAAAT+TGG 0.279303 5:-30493126 MsG0580026086.01.T01:three_prime_UTR
AAGTATATCTTCTTCTCTTT+GGG 0.299726 5:+30493812 None:intergenic
AAAATCAAGATGGAAATATA+TGG 0.299831 5:-30493842 MsG0580026086.01.T01:CDS
TCACATTGTCATTTCCTTCA+TGG 0.302593 5:+30493248 None:intergenic
TCCCATGGTGCTCGTGTCTT+TGG 0.306250 5:+30497819 None:intergenic
TTGAAGAGATGAATGAGAAT+TGG 0.357713 5:-30497740 MsG0580026086.01.T01:CDS
ATGTCGCTTTAACACTTAGA+AGG 0.364899 5:-30493168 MsG0580026086.01.T01:three_prime_UTR
ATTTGCTCTTAACAGAATCT+TGG 0.365991 5:-30493283 MsG0580026086.01.T01:three_prime_UTR
GTGCTCGTGTCTTTGGTGTT+AGG 0.368387 5:+30497826 None:intergenic
GAAGTCTTCTCTTCTTTGAA+TGG 0.374215 5:+30493486 None:intergenic
CTTCTCTTCTTTGAATGGTT+GGG 0.374760 5:+30493491 None:intergenic
GATTGTTGTTGGGAGTTTGA+TGG 0.387873 5:+30497929 None:intergenic
CATTCGTCTTCACCGCTTCG+AGG 0.391057 5:+30497885 None:intergenic
TCTTCTCTTCTTTGAATGGT+TGG 0.391343 5:+30493490 None:intergenic
AATTGGAATGAGAGGAGAAA+AGG 0.398586 5:-30497723 MsG0580026086.01.T01:CDS
AATTGCGTATAGCAAATTTC+AGG 0.398978 5:-30493769 MsG0580026086.01.T01:intron
TTCTTTGAATGGTTGGGTAG+AGG 0.407560 5:+30493497 None:intergenic
GAAAATATTGCTGCCCAGAT+TGG 0.426421 5:+30493207 None:intergenic
TCTTAACAGAATCTTGGTTA+AGG 0.437011 5:-30493277 MsG0580026086.01.T01:three_prime_UTR
TCTTTGAATGGTTGGGTAGA+GGG 0.440125 5:+30493498 None:intergenic
ATGTATTTCCACCCATCAAT+TGG 0.442948 5:+30493591 None:intergenic
CGTTGTTCAGATCATTATTG+TGG 0.449866 5:+30493922 None:intergenic
ATTGGAATGAGAGGAGAAAA+GGG 0.452091 5:-30497722 MsG0580026086.01.T01:CDS
GATATTGTTTCCCACCCATC+AGG 0.452510 5:+30493867 None:intergenic
AACACTGCCCTTCCCTCTCT+TGG 0.455080 5:+30493545 None:intergenic
AGAAGAAGATATACTTATGC+AGG 0.469115 5:-30493805 MsG0580026086.01.T01:CDS
TGGAGAAGAGTGATTTGAAT+TGG 0.476363 5:+30497952 None:intergenic
TGTGTTGGTGGTGCCAATCT+GGG 0.478282 5:-30493220 MsG0580026086.01.T01:three_prime_UTR
CCCCTTGGTAGGAGATAGCC+TGG 0.481716 5:-30493444 MsG0580026086.01.T01:exon
GAGAATTGACGGATTGTTGT+TGG 0.486189 5:+30497918 None:intergenic
AGCCGGAGGAGGCCAATTGA+TGG 0.487719 5:-30493603 MsG0580026086.01.T01:CDS
AGAATTGACGGATTGTTGTT+GGG 0.488814 5:+30497919 None:intergenic
TGAATGAGAATTGGAATGAG+AGG 0.489738 5:-30497731 MsG0580026086.01.T01:CDS
GTCTTTGGTGTTAGGTCTTG+TGG 0.490061 5:+30497834 None:intergenic
GAAATACATGATTGAGGTGG+TGG 0.492359 5:-30493577 MsG0580026086.01.T01:CDS
TTCGGAAGAAGTGGCGGACG+CGG 0.493653 5:-30497778 MsG0580026086.01.T01:CDS
GTTGTTCAGATCATTATTGT+GGG 0.496230 5:+30493923 None:intergenic
GAGGAGAAAAGGGTTGAAGA+AGG 0.496899 5:-30497712 MsG0580026086.01.T01:CDS
CAACTTTGCCGAGGTGTGAC+CGG 0.499946 5:-30493334 MsG0580026086.01.T01:three_prime_UTR
TGTTGTTGGGAGTTTGATGG+TGG 0.501232 5:+30497932 None:intergenic
GTTGAAGAAGGAGAAGGTTG+AGG 0.502124 5:-30497700 MsG0580026086.01.T01:CDS
ACCCATCAATTGGCCTCCTC+CGG 0.503862 5:+30493601 None:intergenic
TCAAGACACACATATTTAGC+CGG 0.505354 5:-30493620 MsG0580026086.01.T01:CDS
AAGACGAATGGAACGAAGCA+TGG 0.512484 5:-30497872 MsG0580026086.01.T01:CDS
TCTCGCAAAATAGAAACAAA+AGG 0.514282 5:-30493367 MsG0580026086.01.T01:three_prime_UTR
ATCCAGGCTATCTCCTACCA+AGG 0.519332 5:+30493442 None:intergenic
AAATCAAGATGGAAATATAT+GGG 0.521501 5:-30493841 MsG0580026086.01.T01:CDS
GCCGGAGGAGGCCAATTGAT+GGG 0.524719 5:-30493602 MsG0580026086.01.T01:CDS
GAAGAAGGAGAAGGTTGAGG+AGG 0.538173 5:-30497697 MsG0580026086.01.T01:CDS
CTCGAAGCGGTGAAGACGAA+TGG 0.539770 5:-30497884 MsG0580026086.01.T01:CDS
CCAAATGCCAAGAGAGGGAA+GGG 0.544767 5:-30493552 MsG0580026086.01.T01:CDS
GGTTAAGGTTCAAACCATGA+AGG 0.545596 5:-30493262 MsG0580026086.01.T01:three_prime_UTR
GCAGTATGTACAGTGAGTTA+AGG 0.545841 5:-30493143 MsG0580026086.01.T01:three_prime_UTR
ACCAAAGACACGAGCACCAT+GGG 0.550429 5:-30497820 MsG0580026086.01.T01:CDS
TGTTGTTGTGATTCTTCGAA+AGG 0.551025 5:+30497989 None:intergenic
AGGAGACGTGAATTTCGCTT+CGG 0.552773 5:-30497796 MsG0580026086.01.T01:CDS
GATTGCGAGATGAGAATTGA+CGG 0.555084 5:+30497907 None:intergenic
GAATTTCGCTTCGGAAGAAG+TGG 0.555553 5:-30497787 MsG0580026086.01.T01:CDS
GATAAGAGTTACATTCCCCT+TGG 0.562876 5:-30493459 MsG0580026086.01.T01:CDS
TCCAGGCTATCTCCTACCAA+GGG 0.574659 5:+30493443 None:intergenic
CACACATATTTAGCCGGAGG+AGG 0.582454 5:-30493614 MsG0580026086.01.T01:CDS
AAAAGGGTTGAAGAAGGAGA+AGG 0.586592 5:-30497706 MsG0580026086.01.T01:CDS
AATGTGATGTACTGTGTTGG+TGG 0.588310 5:-30493232 MsG0580026086.01.T01:three_prime_UTR
AGAGTTACATTCCCCTTGGT+AGG 0.590750 5:-30493455 MsG0580026086.01.T01:CDS
TACTTATGCAGGAATTCGAA+CGG 0.593879 5:-30493794 MsG0580026086.01.T01:CDS
AGACGAATGGAACGAAGCAT+GGG 0.595675 5:-30497871 MsG0580026086.01.T01:CDS
TTGCCGAGGTGTGACCGGAA+TGG 0.607469 5:-30493329 MsG0580026086.01.T01:three_prime_UTR
ACCAAATGCCAAGAGAGGGA+AGG 0.608335 5:-30493553 MsG0580026086.01.T01:CDS
AAATTCACGTCTCCTTCCCA+TGG 0.608435 5:+30497804 None:intergenic
AGTGGCGGACGCGGAGACGA+AGG 0.608660 5:-30497769 MsG0580026086.01.T01:CDS
CTCTGCAGAGGTCATTGCAG+TGG 0.620641 5:-30493404 MsG0580026086.01.T01:three_prime_UTR
CACCAAAGACACGAGCACCA+TGG 0.621256 5:-30497821 MsG0580026086.01.T01:CDS
AAGACACGAGCACCATGGGA+AGG 0.621580 5:-30497816 MsG0580026086.01.T01:CDS
TTTCGCTTCGGAAGAAGTGG+CGG 0.622582 5:-30497784 MsG0580026086.01.T01:CDS
GAATACATAAAACTACATCC+AGG 0.626424 5:+30493426 None:intergenic
GTGGGACCAAATGCCAAGAG+AGG 0.630227 5:-30493558 MsG0580026086.01.T01:CDS
CTGCCATTCCGGTCACACCT+CGG 0.639459 5:+30493326 None:intergenic
GACAATGTGATGTACTGTGT+TGG 0.643437 5:-30493235 MsG0580026086.01.T01:three_prime_UTR
GTAGAGGGATCAGAGAGACT+TGG 0.651783 5:+30493513 None:intergenic
TGGGACCAAATGCCAAGAGA+GGG 0.653748 5:-30493557 MsG0580026086.01.T01:CDS
TCATCTCGCAATCCTCGAAG+CGG 0.654358 5:-30497897 MsG0580026086.01.T01:CDS
GGAATGGCAGCTGAAAATCT+CGG 0.657229 5:-30493313 MsG0580026086.01.T01:three_prime_UTR
TGATCACTGCAACTTTGCCG+AGG 0.672315 5:-30493343 MsG0580026086.01.T01:three_prime_UTR
GGAGGAGGCCAATTGATGGG+TGG 0.673463 5:-30493599 MsG0580026086.01.T01:CDS
AGACACACATATTTAGCCGG+AGG 0.692755 5:-30493617 MsG0580026086.01.T01:CDS
AAATACATGATTGAGGTGGT+GGG 0.711165 5:-30493576 MsG0580026086.01.T01:CDS
CCAGGCTATCTCCTACCAAG+GGG 0.715022 5:+30493444 None:intergenic
ACGAAGCATGGGAATCAGCG+TGG 0.715370 5:-30497860 MsG0580026086.01.T01:CDS
GTGGAAATACATGATTGAGG+TGG 0.721823 5:-30493580 MsG0580026086.01.T01:CDS
TGGGTGGAAATACATGATTG+AGG 0.745836 5:-30493583 MsG0580026086.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAATATAATGCTTAAT+AGG + Chr5:30497391-30497410 None:intergenic 15.0%
!! AATAAGATGCTTATAAAAAT+AGG - Chr5:30494715-30494734 MsG0580026086.01.T01:intron 15.0%
!! ATAAGATGCTTATAAAAATA+GGG - Chr5:30494716-30494735 MsG0580026086.01.T01:intron 15.0%
!! TATAAAGTTATAAATGCTAA+AGG + Chr5:30497437-30497456 None:intergenic 15.0%
!! TTAAACTATTTATGCAAATA+TGG - Chr5:30494260-30494279 MsG0580026086.01.T01:intron 15.0%
!! TTTCTAAATATTTCAATTAG+CGG - Chr5:30496958-30496977 MsG0580026086.01.T01:intron 15.0%
!!! ATTAAGCATTATATTGTTTT+TGG - Chr5:30497391-30497410 MsG0580026086.01.T01:intron 15.0%
!!! ATTAATACTTTAAGCTTTTA+AGG - Chr5:30496789-30496808 MsG0580026086.01.T01:intron 15.0%
!! AAAATCAAGATGGAAATATA+TGG - Chr5:30497262-30497281 MsG0580026086.01.T01:intron 20.0%
!! AAATCAAGATGGAAATATAT+GGG - Chr5:30497263-30497282 MsG0580026086.01.T01:intron 20.0%
!! ACTTATTTAAACTTATCTAC+TGG + Chr5:30494005-30494024 None:intergenic 20.0%
!! AGATACATTAATATTAAAGC+AGG + Chr5:30497124-30497143 None:intergenic 20.0%
!! ATAGTTTGGAAAATATAAGA+AGG - Chr5:30493451-30493470 MsG0580026086.01.T01:CDS 20.0%
!! ATCAATCAATTAAGAAACTA+TGG + Chr5:30494286-30494305 None:intergenic 20.0%
!! ATGACATATTTATAAGTCAT+TGG + Chr5:30494391-30494410 None:intergenic 20.0%
!! GAAAATATAAGAAGGATTAT+AGG - Chr5:30493459-30493478 MsG0580026086.01.T01:CDS 20.0%
!! TTAAGGACATCAAATTAAAT+TGG - Chr5:30497978-30497997 MsG0580026086.01.T01:CDS 20.0%
!!! GTTTTATTTTATGCTTTGTT+TGG - Chr5:30493640-30493659 MsG0580026086.01.T01:intron 20.0%
!!! TAGTGGTTTTAATTTATACT+TGG - Chr5:30495084-30495103 MsG0580026086.01.T01:intron 20.0%
!!! TTTTTTCACTTTAATGTTGA+AGG - Chr5:30495830-30495849 MsG0580026086.01.T01:intron 20.0%
! AAAGTATGATCCAATTTAAG+AGG + Chr5:30494321-30494340 None:intergenic 25.0%
! AAATTGAATTCAAAGTGTAG+TGG - Chr5:30495067-30495086 MsG0580026086.01.T01:intron 25.0%
! AAGTATATCTTCTTCTCTTT+GGG + Chr5:30497295-30497314 None:intergenic 25.0%
! ACAAAATTCAAGAAACAAAC+AGG + Chr5:30496820-30496839 None:intergenic 25.0%
! ACAATATCGAAAAATCAAGA+TGG - Chr5:30497252-30497271 MsG0580026086.01.T01:intron 25.0%
! ACCTATCTGTATATATGATA+AGG - Chr5:30496137-30496156 MsG0580026086.01.T01:intron 25.0%
! ACCTTATCATATATACAGAT+AGG + Chr5:30496141-30496160 None:intergenic 25.0%
! AGCCAAAAAAATAAAGATAG+CGG + Chr5:30497004-30497023 None:intergenic 25.0%
! ATCAATCAATTAACCAACTA+TGG + Chr5:30494742-30494761 None:intergenic 25.0%
! CTTAAAATTGAGTCATTACA+GGG - Chr5:30496468-30496487 MsG0580026086.01.T01:intron 25.0%
! GCTTGTATAACAAATACTTA+TGG - Chr5:30494681-30494700 MsG0580026086.01.T01:intron 25.0%
! GTGTTATAAAATATAGACCT+TGG - Chr5:30496256-30496275 MsG0580026086.01.T01:intron 25.0%
! TAAAACAGAAATGAAAACAG+TGG + Chr5:30496758-30496777 None:intergenic 25.0%
! TAAGTATATCTTCTTCTCTT+TGG + Chr5:30497296-30497315 None:intergenic 25.0%
! TAGCTAATATGGAAACAATT+TGG - Chr5:30494611-30494630 MsG0580026086.01.T01:intron 25.0%
! TGATTGAAAGAGAAAGAAAA+GGG + Chr5:30496580-30496599 None:intergenic 25.0%
! TGTGTCAATACTTCATTTAA+AGG + Chr5:30493673-30493692 None:intergenic 25.0%
! TTAAAATTGAGTCATTACAG+GGG - Chr5:30496469-30496488 MsG0580026086.01.T01:intron 25.0%
!! AATCACACACTTGATATTTT+TGG - Chr5:30495518-30495537 MsG0580026086.01.T01:intron 25.0%
!! GAGTGGATGAAATTAAATTT+TGG - Chr5:30495262-30495281 MsG0580026086.01.T01:intron 25.0%
!! GCTGTTTAAGATAGTTTATA+TGG - Chr5:30494157-30494176 MsG0580026086.01.T01:intron 25.0%
!! GGTATTTTATGATTTTCTCA+CGG - Chr5:30496491-30496510 MsG0580026086.01.T01:intron 25.0%
!! TGATGGCATTTAAAATGAAA+AGG + Chr5:30495991-30496010 None:intergenic 25.0%
!! TTTTATAACACATCATGTCA+TGG + Chr5:30496247-30496266 None:intergenic 25.0%
!!! ATGTTTTTGAATTCAGAAGT+TGG + Chr5:30497216-30497235 None:intergenic 25.0%
!!! CTATCTTTATTTTTTTGGCT+CGG - Chr5:30497004-30497023 MsG0580026086.01.T01:intron 25.0%
!!! CTCAATTTTAAGGTTAATTC+TGG + Chr5:30496460-30496479 None:intergenic 25.0%
!!! GCTTAAAATTAAGAGCATTT+AGG + Chr5:30494925-30494944 None:intergenic 25.0%
!!! GTTGTTTTCATAAGTTATTC+TGG - Chr5:30493893-30493912 MsG0580026086.01.T01:CDS 25.0%
!!! GTTTGTTTCTTGAATTTTGT+TGG - Chr5:30496820-30496839 MsG0580026086.01.T01:intron 25.0%
AAAAAGAGGAAAACAGAAAC+AGG + Chr5:30496720-30496739 None:intergenic 30.0%
AAAAGAGGAAAACAGAAACA+GGG + Chr5:30496719-30496738 None:intergenic 30.0%
AAAGCATAAACTACAAGATG+AGG + Chr5:30495931-30495950 None:intergenic 30.0%
AATTCAAAAACATGCCTGAT+GGG - Chr5:30497223-30497242 MsG0580026086.01.T01:intron 30.0%
AATTGCGTATAGCAAATTTC+AGG - Chr5:30497335-30497354 MsG0580026086.01.T01:intron 30.0%
ACATAAACATTACCATCTCA+TGG - Chr5:30497051-30497070 MsG0580026086.01.T01:intron 30.0%
ACTAGATTAATTTCGATCCA+AGG + Chr5:30496276-30496295 None:intergenic 30.0%
AGAAGAAGATATACTTATGC+AGG - Chr5:30497299-30497318 MsG0580026086.01.T01:intron 30.0%
ATGATGTGATGCTCTTAAAT+TGG - Chr5:30494764-30494783 MsG0580026086.01.T01:intron 30.0%
ATGATGTGTTCCTCTTAAAT+TGG - Chr5:30494308-30494327 MsG0580026086.01.T01:intron 30.0%
ATTCTGATAGATGTTGAGAA+AGG - Chr5:30496029-30496048 MsG0580026086.01.T01:intron 30.0%
ATTTGCTCTTAACAGAATCT+TGG - Chr5:30497821-30497840 MsG0580026086.01.T01:CDS 30.0%
CATATTTATAAGTCATTGGC+TGG + Chr5:30494387-30494406 None:intergenic 30.0%
CATTATATATTTGGTCGTCT+TGG - Chr5:30495605-30495624 MsG0580026086.01.T01:intron 30.0%
CCTTAAAATTGAGTCATTAC+AGG - Chr5:30496467-30496486 MsG0580026086.01.T01:intron 30.0%
GAATACATAAAACTACATCC+AGG + Chr5:30497681-30497700 None:intergenic 30.0%
GATTATGAACATGTCATAAG+TGG - Chr5:30493943-30493962 MsG0580026086.01.T01:intron 30.0%
GCCAAAAAAATAAAGATAGC+GGG + Chr5:30497003-30497022 None:intergenic 30.0%
GTGATTGAAAGAGAAAGAAA+AGG + Chr5:30496581-30496600 None:intergenic 30.0%
GTTGTTCAGATCATTATTGT+GGG + Chr5:30497184-30497203 None:intergenic 30.0%
TAAAATTGAGTCATTACAGG+GGG - Chr5:30496470-30496489 MsG0580026086.01.T01:intron 30.0%
TATAAAAATAGGGCCATAGT+TGG - Chr5:30494726-30494745 MsG0580026086.01.T01:intron 30.0%
TCAAATAAGTCAATCCAAAC+CGG - Chr5:30494464-30494483 MsG0580026086.01.T01:intron 30.0%
TCTATCAGAATGCAATAGAA+AGG + Chr5:30496020-30496039 None:intergenic 30.0%
TCTATTAGTGATCTGTTTCA+AGG + Chr5:30495297-30495316 None:intergenic 30.0%
TCTCGCAAAATAGAAACAAA+AGG - Chr5:30497737-30497756 MsG0580026086.01.T01:CDS 30.0%
TCTTAACAGAATCTTGGTTA+AGG - Chr5:30497827-30497846 MsG0580026086.01.T01:CDS 30.0%
TGCGAGGAACATTATATATT+TGG - Chr5:30495596-30495615 MsG0580026086.01.T01:intron 30.0%
TTAAATAAGTCAATCCAAGC+AGG - Chr5:30494015-30494034 MsG0580026086.01.T01:intron 30.0%
TTCTGATAGATGTTGAGAAA+GGG - Chr5:30496030-30496049 MsG0580026086.01.T01:intron 30.0%
TTGAAACAGATCACTAATAG+AGG - Chr5:30495296-30495315 MsG0580026086.01.T01:intron 30.0%
TTGAAGAGATGAATGAGAAT+TGG - Chr5:30493364-30493383 MsG0580026086.01.T01:three_prime_UTR 30.0%
! AAAATGAAAAGGCATATGCT+AGG + Chr5:30495980-30495999 None:intergenic 30.0%
! AAGTTATTCTGGAGAGATTA+TGG - Chr5:30493904-30493923 MsG0580026086.01.T01:CDS 30.0%
! ATTTGGCTTCAGTTTATCTT+TGG - Chr5:30494628-30494647 MsG0580026086.01.T01:intron 30.0%
! CCTGTAATGACTCAATTTTA+AGG + Chr5:30496470-30496489 None:intergenic 30.0%
! TTATGCTTTTGTGAAAGTTG+AGG - Chr5:30495942-30495961 MsG0580026086.01.T01:intron 30.0%
!! AAAATACTGCAGTTGATAAG+AGG + Chr5:30497157-30497176 None:intergenic 30.0%
!! AACATGCTTTTTGTGCAATT+GGG - Chr5:30495744-30495763 MsG0580026086.01.T01:intron 30.0%
!! TAACATGCTTTTTGTGCAAT+TGG - Chr5:30495743-30495762 MsG0580026086.01.T01:intron 30.0%
!!! CTGCTGATATATCTAGTTTT+AGG - Chr5:30495691-30495710 MsG0580026086.01.T01:intron 30.0%
AAATACATGATTGAGGTGGT+GGG - Chr5:30497528-30497547 MsG0580026086.01.T01:intron 35.0%
AATTGGAATGAGAGGAGAAA+AGG - Chr5:30493381-30493400 MsG0580026086.01.T01:three_prime_UTR 35.0%
ACAGATCACTAATAGAGGAT+AGG - Chr5:30495301-30495320 MsG0580026086.01.T01:intron 35.0%
ACTAGATATATCAGCAGACT+TGG + Chr5:30495688-30495707 None:intergenic 35.0%
ACTGAAACTTCAGATTGAAG+TGG + Chr5:30494883-30494902 None:intergenic 35.0%
ATGTATTTCCACCCATCAAT+TGG + Chr5:30497516-30497535 None:intergenic 35.0%
ATTAGTGATCTGTTTCAAGG+TGG + Chr5:30495294-30495313 None:intergenic 35.0%
ATTGGAATGAGAGGAGAAAA+GGG - Chr5:30493382-30493401 MsG0580026086.01.T01:three_prime_UTR 35.0%
CACGTATTGTTTGTAACCTA+TGG - Chr5:30494949-30494968 MsG0580026086.01.T01:intron 35.0%
CATCCACTCAAATATACCTT+CGG + Chr5:30495251-30495270 None:intergenic 35.0%
CCTTCGGAAAATATATTGCT+TGG + Chr5:30495235-30495254 None:intergenic 35.0%
CGTTGTTCAGATCATTATTG+TGG + Chr5:30497185-30497204 None:intergenic 35.0%
CTAAGCATGTATGTCCTATA+AGG + Chr5:30493812-30493831 None:intergenic 35.0%
CTATTTCCAAGTCTTCTCTT+CGG - Chr5:30496520-30496539 MsG0580026086.01.T01:intron 35.0%
CTTATAGGACATACATGCTT+AGG - Chr5:30493810-30493829 MsG0580026086.01.T01:CDS 35.0%
CTTCTCTTCTTTGAATGGTT+GGG + Chr5:30497616-30497635 None:intergenic 35.0%
GAAAGGTGGGATTTATAGTT+TGG - Chr5:30493437-30493456 MsG0580026086.01.T01:exon 35.0%
GAAGTCTTCTCTTCTTTGAA+TGG + Chr5:30497621-30497640 None:intergenic 35.0%
GAATTCAAAAACATGCCTGA+TGG - Chr5:30497222-30497241 MsG0580026086.01.T01:intron 35.0%
GCTCTTGAAGATAGCTAATA+TGG - Chr5:30494600-30494619 MsG0580026086.01.T01:intron 35.0%
TAAGGAGATTGAGAAACTTG+AGG - Chr5:30493517-30493536 MsG0580026086.01.T01:CDS 35.0%
TACTTATGCAGGAATTCGAA+CGG - Chr5:30497310-30497329 MsG0580026086.01.T01:intron 35.0%
TCAAGACACACATATTTAGC+CGG - Chr5:30497484-30497503 MsG0580026086.01.T01:intron 35.0%
TCAATAATCATAGCACGCAA+TGG + Chr5:30495665-30495684 None:intergenic 35.0%
TCAGCACTTTCATAACAAAG+TGG + Chr5:30495891-30495910 None:intergenic 35.0%
TCAGGTGCTTATTAAAAGAC+AGG - Chr5:30497353-30497372 MsG0580026086.01.T01:intron 35.0%
TCTTCTCTTCTTTGAATGGT+TGG + Chr5:30497617-30497636 None:intergenic 35.0%
TGAATGAGAATTGGAATGAG+AGG - Chr5:30493373-30493392 MsG0580026086.01.T01:three_prime_UTR 35.0%
TGGAGAAGAGTGATTTGAAT+TGG + Chr5:30493155-30493174 None:intergenic 35.0%
TGTCCTATAAGGTGCAAAAT+AGG + Chr5:30493801-30493820 None:intergenic 35.0%
TGTTGTTGTGATTCTTCGAA+AGG + Chr5:30493118-30493137 None:intergenic 35.0%
! AACTCTACTAGTGTTGAAGT+TGG - Chr5:30495785-30495804 MsG0580026086.01.T01:intron 35.0%
! AGACCTATTTTGCACCTTAT+AGG - Chr5:30493795-30493814 MsG0580026086.01.T01:CDS 35.0%
! AGAGTGTTTAGTATAGCTCA+CGG - Chr5:30494532-30494551 MsG0580026086.01.T01:intron 35.0%
! CAATAGAAAGGCAGTATTGA+TGG + Chr5:30496008-30496027 None:intergenic 35.0%
! CATCAGTTCTAGTTAAGATG+AGG - Chr5:30495171-30495190 MsG0580026086.01.T01:intron 35.0%
! CCAAGCAATATATTTTCCGA+AGG - Chr5:30495232-30495251 MsG0580026086.01.T01:intron 35.0%
! CTCGGGTAGAGTTTAAAATT+TGG - Chr5:30494981-30495000 MsG0580026086.01.T01:intron 35.0%
! CTTTTGTGAAAGTTGAGGAT+TGG - Chr5:30495947-30495966 MsG0580026086.01.T01:intron 35.0%
! CTTTTTGTGCAATTGGGTTT+AGG - Chr5:30495750-30495769 MsG0580026086.01.T01:intron 35.0%
! GGGTAGAGTTTAAAATTTGG+AGG - Chr5:30494984-30495003 MsG0580026086.01.T01:intron 35.0%
! GTTTTATGTATTCTCTGCAG+AGG - Chr5:30497688-30497707 MsG0580026086.01.T01:intron 35.0%
! TCACATTGTCATTTCCTTCA+TGG + Chr5:30497859-30497878 None:intergenic 35.0%
! TTGGAGGCTTTTAATGTGTT+TGG - Chr5:30495000-30495019 MsG0580026086.01.T01:intron 35.0%
! TTTCCGAAGGTATATTTGAG+TGG - Chr5:30495245-30495264 MsG0580026086.01.T01:intron 35.0%
!! AACACTTTGTGAGAGTGTTT+AGG - Chr5:30494076-30494095 MsG0580026086.01.T01:intron 35.0%
!! AGAATTGACGGATTGTTGTT+GGG + Chr5:30493188-30493207 None:intergenic 35.0%
!! ATGTCGCTTTAACACTTAGA+AGG - Chr5:30497936-30497955 MsG0580026086.01.T01:CDS 35.0%
!!! GCCCGCTATCTTTATTTTTT+TGG - Chr5:30496999-30497018 MsG0580026086.01.T01:intron 35.0%
AAAAGGGTTGAAGAAGGAGA+AGG - Chr5:30493398-30493417 MsG0580026086.01.T01:three_prime_UTR 40.0%
AAACTTGAGGAGGCGAAATT+GGG - Chr5:30493530-30493549 MsG0580026086.01.T01:CDS 40.0%
AAGAAACAGAAGTTGCATGC+TGG - Chr5:30493485-30493504 MsG0580026086.01.T01:CDS 40.0%
AATGTGATGTACTGTGTTGG+TGG - Chr5:30497872-30497891 MsG0580026086.01.T01:CDS 40.0%
ACAACTATGATGCCATGAGA+TGG + Chr5:30497066-30497085 None:intergenic 40.0%
ACGCACACTGAAATAGATGT+AGG - Chr5:30496220-30496239 MsG0580026086.01.T01:intron 40.0%
AGAAACAGAAGTTGCATGCT+GGG - Chr5:30493486-30493505 MsG0580026086.01.T01:CDS 40.0%
AGCTCATGGAAACAGCTTAT+GGG - Chr5:30494101-30494120 MsG0580026086.01.T01:intron 40.0%
AGGCATAGCCTCTAAACAAA+GGG + Chr5:30496670-30496689 None:intergenic 40.0%
AGGTTACAAACAATACGTGC+TGG + Chr5:30494948-30494967 None:intergenic 40.0%
ATGTTGAGAAAGGGTAGCAA+AGG - Chr5:30496039-30496058 MsG0580026086.01.T01:intron 40.0%
ATGTTGTCAGTCCTGTATAG+CGG + Chr5:30497035-30497054 None:intergenic 40.0%
CACGAAACACGAAGAAAAAG+AGG + Chr5:30496734-30496753 None:intergenic 40.0%
CATTGTGTACATGTCATTGC+TGG + Chr5:30494801-30494820 None:intergenic 40.0%
GAAAATATTGCTGCCCAGAT+TGG + Chr5:30497900-30497919 None:intergenic 40.0%
GAAATACATGATTGAGGTGG+TGG - Chr5:30497527-30497546 MsG0580026086.01.T01:intron 40.0%
GACAATGTGATGTACTGTGT+TGG - Chr5:30497869-30497888 MsG0580026086.01.T01:CDS 40.0%
GATAAGAGTTACATTCCCCT+TGG - Chr5:30497645-30497664 MsG0580026086.01.T01:intron 40.0%
GATTGCGAGATGAGAATTGA+CGG + Chr5:30493200-30493219 None:intergenic 40.0%
GCAGTATGTACAGTGAGTTA+AGG - Chr5:30497961-30497980 MsG0580026086.01.T01:CDS 40.0%
GGTTAAGGTTCAAACCATGA+AGG - Chr5:30497842-30497861 MsG0580026086.01.T01:CDS 40.0%
GGTTACAAACAATACGTGCT+GGG + Chr5:30494947-30494966 None:intergenic 40.0%
GTGGAAATACATGATTGAGG+TGG - Chr5:30497524-30497543 MsG0580026086.01.T01:intron 40.0%
TAGCTCATGGAAACAGCTTA+TGG - Chr5:30494100-30494119 MsG0580026086.01.T01:intron 40.0%
TCATCGCCATCTATAACCTA+GGG + Chr5:30495348-30495367 None:intergenic 40.0%
TCTTTGAATGGTTGGGTAGA+GGG + Chr5:30497609-30497628 None:intergenic 40.0%
TGGGTGGAAATACATGATTG+AGG - Chr5:30497521-30497540 MsG0580026086.01.T01:intron 40.0%
TTCATCGCCATCTATAACCT+AGG + Chr5:30495349-30495368 None:intergenic 40.0%
TTCTTTGAATGGTTGGGTAG+AGG + Chr5:30497610-30497629 None:intergenic 40.0%
! AACCTATGGCTTGTGTTTCT+CGG - Chr5:30494963-30494982 MsG0580026086.01.T01:intron 40.0%
! ACAGAAAGAGCTTTATGAGC+CGG + Chr5:30494486-30494505 None:intergenic 40.0%
! AGAGTGTTTAGGATAGCTCA+TGG - Chr5:30494087-30494106 MsG0580026086.01.T01:intron 40.0%
! CTCTTTTTCTTCGTGTTTCG+TGG - Chr5:30496732-30496751 MsG0580026086.01.T01:intron 40.0%
! GATTGTTGTTGGGAGTTTGA+TGG + Chr5:30493178-30493197 None:intergenic 40.0%
! TTTAGAGGCTATGCCTGTTT+TGG - Chr5:30496674-30496693 MsG0580026086.01.T01:intron 40.0%
!! AAATAAAGATAGCGGGCTAC+CGG + Chr5:30496996-30497015 None:intergenic 40.0%
!! CTGCAGTTGATAAGAGGATT+AGG + Chr5:30497151-30497170 None:intergenic 40.0%
!! GAGAATTGACGGATTGTTGT+TGG + Chr5:30493189-30493208 None:intergenic 40.0%
!! TGAAGTATTGACACAGACAC+CGG - Chr5:30493678-30493697 MsG0580026086.01.T01:intron 40.0%
AAAAGCAAGTAGTGGTCACC+GGG - Chr5:30496378-30496397 MsG0580026086.01.T01:intron 45.0%
AAACAGAGTGGCTCCAAAAC+AGG + Chr5:30496690-30496709 None:intergenic 45.0%
AAATTCACGTCTCCTTCCCA+TGG + Chr5:30493303-30493322 None:intergenic 45.0%
AACTTGAGGAGGCGAAATTG+GGG - Chr5:30493531-30493550 MsG0580026086.01.T01:CDS 45.0%
AAGACGAATGGAACGAAGCA+TGG - Chr5:30493232-30493251 MsG0580026086.01.T01:three_prime_UTR 45.0%
AGACACACATATTTAGCCGG+AGG - Chr5:30497487-30497506 MsG0580026086.01.T01:intron 45.0%
AGACGAATGGAACGAAGCAT+GGG - Chr5:30493233-30493252 MsG0580026086.01.T01:three_prime_UTR 45.0%
AGAGTTACATTCCCCTTGGT+AGG - Chr5:30497649-30497668 MsG0580026086.01.T01:intron 45.0%
AGGAGACGTGAATTTCGCTT+CGG - Chr5:30493308-30493327 MsG0580026086.01.T01:three_prime_UTR 45.0%
AGGAGGAGAATGTGAAAGGT+GGG - Chr5:30493424-30493443 MsG0580026086.01.T01:three_prime_UTR 45.0%
AGGGAAAGTGAAGAGTTGAG+AGG + Chr5:30496561-30496580 None:intergenic 45.0%
ATCGCATACGTGTCAGTTTC+TGG + Chr5:30494360-30494379 None:intergenic 45.0%
ATGTAACGACACGTTGGTGT+TGG - Chr5:30494844-30494863 MsG0580026086.01.T01:intron 45.0%
ATGTGTAGAGAAGATGTGCG+AGG - Chr5:30495580-30495599 MsG0580026086.01.T01:intron 45.0%
CAAAAGCAAGTAGTGGTCAC+CGG - Chr5:30496377-30496396 MsG0580026086.01.T01:intron 45.0%
CAGGCATAGCCTCTAAACAA+AGG + Chr5:30496671-30496690 None:intergenic 45.0%
CCATCTATAACCTAGGGACT+AGG + Chr5:30495342-30495361 None:intergenic 45.0%
CCTAGTCCCTAGGTTATAGA+TGG - Chr5:30495339-30495358 MsG0580026086.01.T01:intron 45.0%
CGTGTTCCAAAAGCAAGTAG+TGG - Chr5:30496370-30496389 MsG0580026086.01.T01:intron 45.0%
GAAACTTGAGGAGGCGAAAT+TGG - Chr5:30493529-30493548 MsG0580026086.01.T01:CDS 45.0%
GAATTTCGCTTCGGAAGAAG+TGG - Chr5:30493317-30493336 MsG0580026086.01.T01:three_prime_UTR 45.0%
GAGGAGAAAAGGGTTGAAGA+AGG - Chr5:30493392-30493411 MsG0580026086.01.T01:three_prime_UTR 45.0%
GATATTGTTTCCCACCCATC+AGG + Chr5:30497240-30497259 None:intergenic 45.0%
GATCGAATGTAACGACACGT+TGG - Chr5:30494838-30494857 MsG0580026086.01.T01:intron 45.0%
GGAATGGCAGCTGAAAATCT+CGG - Chr5:30497791-30497810 MsG0580026086.01.T01:CDS 45.0%
GGAGATTGAGAAACTTGAGG+AGG - Chr5:30493520-30493539 MsG0580026086.01.T01:CDS 45.0%
GGGAAAGTGAAGAGTTGAGA+GGG + Chr5:30496560-30496579 None:intergenic 45.0%
GTTGAAGAAGGAGAAGGTTG+AGG - Chr5:30493404-30493423 MsG0580026086.01.T01:three_prime_UTR 45.0%
GTTGAGGAGGAGAATGTGAA+AGG - Chr5:30493420-30493439 MsG0580026086.01.T01:three_prime_UTR 45.0%
GTTGCATTCTTGTTGCAGCA+TGG - Chr5:30496400-30496419 MsG0580026086.01.T01:intron 45.0%
TCAAAAACATGCCTGATGGG+TGG - Chr5:30497226-30497245 MsG0580026086.01.T01:intron 45.0%
TGAGAAAGGGTAGCAAAGGT+AGG - Chr5:30496043-30496062 MsG0580026086.01.T01:intron 45.0%
TGTGTACATGTCATTGCTGG+TGG + Chr5:30494798-30494817 None:intergenic 45.0%
TGTTGTTGGGAGTTTGATGG+TGG + Chr5:30493175-30493194 None:intergenic 45.0%
TTCACACCGAAGAGAAGACT+TGG + Chr5:30496529-30496548 None:intergenic 45.0%
! AAGAGCTTTATGAGCCGGTT+TGG + Chr5:30494481-30494500 None:intergenic 45.0%
! AAGTCTTCTCTTCGGTGTGA+AGG - Chr5:30496528-30496547 MsG0580026086.01.T01:intron 45.0%
! ACCTATGGCTTGTGTTTCTC+GGG - Chr5:30494964-30494983 MsG0580026086.01.T01:intron 45.0%
! CAAAAACATGCCTGATGGGT+GGG - Chr5:30497227-30497246 MsG0580026086.01.T01:intron 45.0%
! GAGATTTTCAGCTGCCATTC+CGG + Chr5:30497792-30497811 None:intergenic 45.0%
! TGTAACGACACGTTGGTGTT+GGG - Chr5:30494845-30494864 MsG0580026086.01.T01:intron 45.0%
!! AATAAAGATAGCGGGCTACC+GGG + Chr5:30496995-30497014 None:intergenic 45.0%
!! GTCTTTGGTGTTAGGTCTTG+TGG + Chr5:30493273-30493292 None:intergenic 45.0%
AACGCAACATGGCAGTGTGA+CGG + Chr5:30496320-30496339 None:intergenic 50.0%
ACAGGGAGACAGAAACAGAG+TGG + Chr5:30496702-30496721 None:intergenic 50.0%
ACCAAAGACACGAGCACCAT+GGG - Chr5:30493284-30493303 MsG0580026086.01.T01:three_prime_UTR 50.0%
ACCAAATGCCAAGAGAGGGA+AGG - Chr5:30497551-30497570 MsG0580026086.01.T01:intron 50.0%
ACCCGAGAAACACAAGCCAT+AGG + Chr5:30494968-30494987 None:intergenic 50.0%
ACTTGAGGAGGCGAAATTGG+GGG - Chr5:30493532-30493551 MsG0580026086.01.T01:CDS 50.0%
AGAAGTTGCATGCTGGGCTT+TGG - Chr5:30493492-30493511 MsG0580026086.01.T01:CDS 50.0%
AGCCTCTAAACAAAGGGCGA+TGG + Chr5:30496664-30496683 None:intergenic 50.0%
AGTGAAGAGTTGAGAGGGTG+TGG + Chr5:30496555-30496574 None:intergenic 50.0%
ATCCAGGCTATCTCCTACCA+AGG + Chr5:30497665-30497684 None:intergenic 50.0%
CACACATATTTAGCCGGAGG+AGG - Chr5:30497490-30497509 MsG0580026086.01.T01:intron 50.0%
CCAAATGCCAAGAGAGGGAA+GGG - Chr5:30497552-30497571 MsG0580026086.01.T01:intron 50.0%
GAAGAAGGAGAAGGTTGAGG+AGG - Chr5:30493407-30493426 MsG0580026086.01.T01:three_prime_UTR 50.0%
GAGGAGGAGAATGTGAAAGG+TGG - Chr5:30493423-30493442 MsG0580026086.01.T01:three_prime_UTR 50.0%
GCTGCAACAAGAATGCAACC+CGG + Chr5:30496399-30496418 None:intergenic 50.0%
GTAGAGGGATCAGAGAGACT+TGG + Chr5:30497594-30497613 None:intergenic 50.0%
TAAACAAAGGGCGATGGCAG+TGG + Chr5:30496658-30496677 None:intergenic 50.0%
TAGACGTGTCAGTGTTCGTC+CGG + Chr5:30493700-30493719 None:intergenic 50.0%
TCATCTCGCAATCCTCGAAG+CGG - Chr5:30493207-30493226 MsG0580026086.01.T01:three_prime_UTR 50.0%
TCCAGGCTATCTCCTACCAA+GGG + Chr5:30497664-30497683 None:intergenic 50.0%
TGAAGTGCAAACCAGACGCT+GGG - Chr5:30496609-30496628 MsG0580026086.01.T01:intron 50.0%
TGATCACTGCAACTTTGCCG+AGG - Chr5:30497761-30497780 MsG0580026086.01.T01:CDS 50.0%
TGGGACCAAATGCCAAGAGA+GGG - Chr5:30497547-30497566 MsG0580026086.01.T01:intron 50.0%
TTTCGCTTCGGAAGAAGTGG+CGG - Chr5:30493320-30493339 MsG0580026086.01.T01:three_prime_UTR 50.0%
! CGGTGACCACTACTTGCTTT+TGG + Chr5:30496379-30496398 None:intergenic 50.0%
! GAATAGCTTGCCTAGTCCCT+AGG - Chr5:30495329-30495348 MsG0580026086.01.T01:intron 50.0%
! GCATACGTGTCAGTTTCTGG+CGG + Chr5:30494357-30494376 None:intergenic 50.0%
! TGCCATCGCCCTTTGTTTAG+AGG - Chr5:30496659-30496678 MsG0580026086.01.T01:intron 50.0%
! TGGTTTGCACTTCACAGCAG+AGG + Chr5:30496603-30496622 None:intergenic 50.0%
!! AAGAGCTCTAAGAGCCTGCT+TGG + Chr5:30494032-30494051 None:intergenic 50.0%
!! ACGTTGGTGTTGGGACATGT+CGG - Chr5:30494854-30494873 MsG0580026086.01.T01:intron 50.0%
!! GTGCTCGTGTCTTTGGTGTT+AGG + Chr5:30493281-30493300 None:intergenic 50.0%
!! TGTGTTGGTGGTGCCAATCT+GGG - Chr5:30497884-30497903 MsG0580026086.01.T01:CDS 50.0%
AACACTGCCCTTCCCTCTCT+TGG + Chr5:30497562-30497581 None:intergenic 55.0%
AAGACACGAGCACCATGGGA+AGG - Chr5:30493288-30493307 MsG0580026086.01.T01:three_prime_UTR 55.0%
ACGAAGCATGGGAATCAGCG+TGG - Chr5:30493244-30493263 MsG0580026086.01.T01:three_prime_UTR 55.0%
ACTGCCATGTTGCGTTGCAG+TGG - Chr5:30496324-30496343 MsG0580026086.01.T01:intron 55.0%
CAACTTTGCCGAGGTGTGAC+CGG - Chr5:30497770-30497789 MsG0580026086.01.T01:CDS 55.0%
CACCAAAGACACGAGCACCA+TGG - Chr5:30493283-30493302 MsG0580026086.01.T01:three_prime_UTR 55.0%
CATTCGTCTTCACCGCTTCG+AGG + Chr5:30493222-30493241 None:intergenic 55.0%
CCAGGCTATCTCCTACCAAG+GGG + Chr5:30497663-30497682 None:intergenic 55.0%
CCCTTCCCTCTCTTGGCATT+TGG + Chr5:30497555-30497574 None:intergenic 55.0%
CTCGAAGCGGTGAAGACGAA+TGG - Chr5:30493220-30493239 MsG0580026086.01.T01:three_prime_UTR 55.0%
CTCTGCAGAGGTCATTGCAG+TGG - Chr5:30497700-30497719 MsG0580026086.01.T01:CDS 55.0%
CTGCCATGTTGCGTTGCAGT+GGG - Chr5:30496325-30496344 MsG0580026086.01.T01:intron 55.0%
CTTGAGGAGGCGAAATTGGG+GGG - Chr5:30493533-30493552 MsG0580026086.01.T01:CDS 55.0%
GAAGTGCAAACCAGACGCTG+GGG - Chr5:30496610-30496629 MsG0580026086.01.T01:intron 55.0%
GCGATGGCAGTGGTTAGAGA+CGG + Chr5:30496648-30496667 None:intergenic 55.0%
GTGAAGTGCAAACCAGACGC+TGG - Chr5:30496608-30496627 MsG0580026086.01.T01:intron 55.0%
GTGGGACCAAATGCCAAGAG+AGG - Chr5:30497546-30497565 MsG0580026086.01.T01:intron 55.0%
TCCCATGGTGCTCGTGTCTT+TGG + Chr5:30493288-30493307 None:intergenic 55.0%
TGGAACACGACACTGTGCGT+GGG + Chr5:30496359-30496378 None:intergenic 55.0%
TTGGAACACGACACTGTGCG+TGG + Chr5:30496360-30496379 None:intergenic 55.0%
! ACCCATCAATTGGCCTCCTC+CGG + Chr5:30497506-30497525 None:intergenic 55.0%
! GTCAGTCCTGTATAGCGGAG+CGG + Chr5:30497030-30497049 None:intergenic 55.0%
!! CTGTGTTGGTGGTGCCAATC+TGG - Chr5:30497883-30497902 MsG0580026086.01.T01:CDS 55.0%
!! GCATGCTGGGCTTTGGAGTA+AGG - Chr5:30493499-30493518 MsG0580026086.01.T01:CDS 55.0%
AGCCGGAGGAGGCCAATTGA+TGG - Chr5:30497501-30497520 MsG0580026086.01.T01:intron 60.0%
CCACCCACTGCAACGCAACA+TGG + Chr5:30496331-30496350 None:intergenic 60.0%
CCATGTTGCGTTGCAGTGGG+TGG - Chr5:30496328-30496347 MsG0580026086.01.T01:intron 60.0%
CCCCTTGGTAGGAGATAGCC+TGG - Chr5:30497660-30497679 MsG0580026086.01.T01:intron 60.0%
CTGCCATTCCGGTCACACCT+CGG + Chr5:30497781-30497800 None:intergenic 60.0%
GAACACGACACTGTGCGTGG+GGG + Chr5:30496357-30496376 None:intergenic 60.0%
GCAACATGGCAGTGTGACGG+CGG + Chr5:30496317-30496336 None:intergenic 60.0%
GCCGGAGGAGGCCAATTGAT+GGG - Chr5:30497502-30497521 MsG0580026086.01.T01:intron 60.0%
GGAACACGACACTGTGCGTG+GGG + Chr5:30496358-30496377 None:intergenic 60.0%
GGAGGAGGCCAATTGATGGG+TGG - Chr5:30497505-30497524 MsG0580026086.01.T01:intron 60.0%
GGCAGTGGTTAGAGACGGCT+GGG + Chr5:30496643-30496662 None:intergenic 60.0%
TGGCAGTGGTTAGAGACGGC+TGG + Chr5:30496644-30496663 None:intergenic 60.0%
TGTTGCGTTGCAGTGGGTGG+CGG - Chr5:30496331-30496350 MsG0580026086.01.T01:intron 60.0%
TTAGCGGCCATCCTGCAACC+CGG - Chr5:30496974-30496993 MsG0580026086.01.T01:intron 60.0%
TTGCCGAGGTGTGACCGGAA+TGG - Chr5:30497775-30497794 MsG0580026086.01.T01:CDS 60.0%
! GAAATTGGGGGGTGTGGTGG+TGG - Chr5:30493544-30493563 MsG0580026086.01.T01:CDS 60.0%
!! TTCGGAAGAAGTGGCGGACG+CGG - Chr5:30493326-30493345 MsG0580026086.01.T01:three_prime_UTR 60.0%
GGAGGCGAAATTGGGGGGTG+TGG - Chr5:30493538-30493557 MsG0580026086.01.T01:CDS 65.0%
! GGCGAAATTGGGGGGTGTGG+TGG - Chr5:30493541-30493560 MsG0580026086.01.T01:CDS 65.0%
!! ATAGCGGGCTACCGGGTTGC+AGG + Chr5:30496988-30497007 None:intergenic 65.0%
!! GGGGGTGTGGTGGTGGTGAA+GGG - Chr5:30493551-30493570 MsG0580026086.01.T01:CDS 65.0%
!! GGGGTGTGGTGGTGGTGAAG+GGG - Chr5:30493552-30493571 MsG0580026086.01.T01:CDS 65.0%
CGGGCTACCGGGTTGCAGGA+TGG + Chr5:30496984-30497003 None:intergenic 70.0%
GCTCGGCCGCTCCGCTATAC+AGG - Chr5:30497021-30497040 MsG0580026086.01.T01:intron 70.0%
GGGACTGAGTCCCCAGCGTC+TGG + Chr5:30496623-30496642 None:intergenic 70.0%
!! AGTGGCGGACGCGGAGACGA+AGG - Chr5:30493335-30493354 MsG0580026086.01.T01:three_prime_UTR 70.0%
!! GGGGGGTGTGGTGGTGGTGA+AGG - Chr5:30493550-30493569 MsG0580026086.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 30493108 30498018 30493108 ID=MsG0580026086.01;Name=MsG0580026086.01
Chr5 mRNA 30493108 30498018 30493108 ID=MsG0580026086.01.T01;Parent=MsG0580026086.01;Name=MsG0580026086.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.5|0.66|1|1|1|3|341|239
Chr5 exon 30493108 30493655 30493108 ID=MsG0580026086.01.T01:exon:33791;Parent=MsG0580026086.01.T01
Chr5 exon 30493770 30493955 30493770 ID=MsG0580026086.01.T01:exon:33790;Parent=MsG0580026086.01.T01
Chr5 exon 30497692 30498018 30497692 ID=MsG0580026086.01.T01:exon:33789;Parent=MsG0580026086.01.T01
Chr5 CDS 30497692 30498018 30497692 ID=MsG0580026086.01.T01:cds;Parent=MsG0580026086.01.T01
Chr5 CDS 30493770 30493955 30493770 ID=MsG0580026086.01.T01:cds;Parent=MsG0580026086.01.T01
Chr5 CDS 30493449 30493655 30493449 ID=MsG0580026086.01.T01:cds;Parent=MsG0580026086.01.T01
Chr5 three_prime_UTR 30493108 30493448 30493108 ID=MsG0580026086.01.T01:three_prime_utr;Parent=MsG0580026086.01.T01
Gene Sequence

>MsG0580026086.01.T01

ATGCAAACCTTTCGAAGAATCACAACAACAGCAACAAAATCAAACCAATTCAAATCACTCTTCTCCACCATCAAACTCCCAACAACAATCCGTCAATTCTCATCTCGCAATCCTCGAAGCGGTGAAGACGAATGGAACGAAGCATGGGAATCAGCGTGGTTACCACAAGACCTAACACCAAAGACACGAGCACCATGGGAAGGAGACGTGAATTTCGCTTCGGAAGAAGTGGCGGACGCGGAGACGAAGGCGTTTGTTGAAGAGATGAATGAGAATTGGAATGAGAGGAGAAAAGGGTTGAAGAAGGAGAAGGTTGAGGAGGAGAATTATTTTGACTCCCACAATAATGATCTGAACAACGCAAAAGATCCAACTTCTGAATTCAAAAACATGCCTGATGGGTGGGAAACAATATCGAAAAATCAAGATGGAAATATATGGGAGATGTCCCAAAGAGAAGAAGATATACTTATGCAGGAATTCGAACGGAGAATTGCGTATAGCAAATTTCAGATTGCAAGTTTTATCAAGACACACATATTTAGCCGGAGGAGGCCAATTGATGGGTGGAAATACATGATTGAGGTGGTGGGACCAAATGCCAAGAGAGGGAAGGGCAGTGTTTCTAGAGTACCAAGTCTCTCTGATCCCTCTACCCAACCATTCAAAGAAGAGAAGACTTCAGTTGATAAGAGTTACATTCCCCTTGGTAGGAGATAG

Protein sequence

>MsG0580026086.01.T01

MQTFRRITTTATKSNQFKSLFSTIKLPTTIRQFSSRNPRSGEDEWNEAWESAWLPQDLTPKTRAPWEGDVNFASEEVADAETKAFVEEMNENWNERRKGLKKEKVEEENYFDSHNNDLNNAKDPTSEFKNMPDGWETISKNQDGNIWEMSQREEDILMQEFERRIAYSKFQIASFIKTHIFSRRRPIDGWKYMIEVVGPNAKRGKGSVSRVPSLSDPSTQPFKEEKTSVDKSYIPLGRR*