AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021332.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021332.01.T01 MTR_4g071900 73.571 560 72 13 85 575 158 710 0.0 748
MsG0480021332.01.T01 MTR_4g071900 55.000 140 39 3 1 138 1 118 1.50e-31 130
MsG0480021332.01.T01 MTR_5g021650 44.250 400 115 16 85 384 156 547 1.14e-67 237
MsG0480021332.01.T01 MTR_5g021650 49.296 71 32 1 1 71 1 67 3.26e-12 70.1
MsG0480021332.01.T01 MTR_8g076190 52.518 278 85 9 85 317 155 430 4.30e-62 221
MsG0480021332.01.T01 MTR_8g076190 53.521 71 28 1 1 71 1 66 7.91e-14 75.5
MsG0480021332.01.T01 MTR_8g076190 52.518 278 85 9 85 317 155 430 1.25e-61 221
MsG0480021332.01.T01 MTR_8g076190 53.521 71 28 1 1 71 1 66 5.86e-14 75.9
MsG0480021332.01.T01 MTR_8g076190 51.228 285 85 9 85 317 155 437 1.03e-60 218
MsG0480021332.01.T01 MTR_8g076190 53.521 71 28 1 1 71 1 66 6.02e-14 75.9
MsG0480021332.01.T01 MTR_3g113110 36.973 403 160 16 85 412 154 537 3.00e-47 179
MsG0480021332.01.T01 MTR_6g082470 43.590 273 103 10 85 315 164 427 5.79e-39 154
MsG0480021332.01.T01 MTR_4g124650 36.392 316 116 14 47 315 249 526 2.47e-28 121
MsG0480021332.01.T01 MTR_1g017540 29.130 230 112 7 86 269 140 364 1.03e-13 74.7
MsG0480021332.01.T01 MTR_3g117330 31.050 219 109 7 86 268 234 446 2.44e-11 67.4
MsG0480021332.01.T01 MTR_4g071210 31.050 219 109 7 86 268 224 436 5.66e-11 66.2
MsG0480021332.01.T01 MTR_4g071210 31.050 219 109 7 86 268 224 436 5.96e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021332.01.T01 AT2G21300 41.239 565 231 19 85 575 158 695 3.90e-93 305
MsG0480021332.01.T01 AT2G21300 78.689 61 13 0 1 61 1 61 3.55e-21 98.6
MsG0480021332.01.T01 AT2G21300 41.239 565 231 19 85 575 158 695 3.90e-93 305
MsG0480021332.01.T01 AT2G21300 78.689 61 13 0 1 61 1 61 3.55e-21 98.6
MsG0480021332.01.T01 AT2G21300 41.239 565 231 19 85 575 158 695 3.90e-93 305
MsG0480021332.01.T01 AT2G21300 78.689 61 13 0 1 61 1 61 3.55e-21 98.6
MsG0480021332.01.T01 AT2G21300 41.239 565 231 19 85 575 158 695 3.90e-93 305
MsG0480021332.01.T01 AT2G21300 78.689 61 13 0 1 61 1 61 3.55e-21 98.6
MsG0480021332.01.T01 AT2G21300 41.239 565 231 19 85 575 158 695 3.90e-93 305
MsG0480021332.01.T01 AT2G21300 78.689 61 13 0 1 61 1 61 3.55e-21 98.6
MsG0480021332.01.T01 AT4G38950 43.670 545 192 26 85 551 147 654 5.50e-87 288
MsG0480021332.01.T01 AT4G38950 90.000 40 4 0 22 61 11 50 8.57e-16 81.6
MsG0480021332.01.T01 AT4G38950 43.670 545 192 26 85 551 147 654 5.50e-87 288
MsG0480021332.01.T01 AT4G38950 90.000 40 4 0 22 61 11 50 8.57e-16 81.6
MsG0480021332.01.T01 AT4G38950 43.670 545 192 26 85 551 147 654 5.50e-87 288
MsG0480021332.01.T01 AT4G38950 90.000 40 4 0 22 61 11 50 8.57e-16 81.6
MsG0480021332.01.T01 AT4G38950 43.670 545 192 26 85 551 147 654 5.50e-87 288
MsG0480021332.01.T01 AT4G38950 90.000 40 4 0 22 61 11 50 8.57e-16 81.6
MsG0480021332.01.T01 AT4G38950 43.670 545 192 26 85 551 147 654 5.50e-87 288
MsG0480021332.01.T01 AT4G38950 90.000 40 4 0 22 61 11 50 8.57e-16 81.6
MsG0480021332.01.T01 AT3G51150 46.104 308 112 10 85 344 153 454 4.71e-58 211
MsG0480021332.01.T01 AT3G51150 53.226 62 29 0 13 74 6 67 1.58e-11 68.2
MsG0480021332.01.T01 AT3G51150 46.104 308 112 10 85 344 153 454 4.71e-58 211
MsG0480021332.01.T01 AT3G51150 53.226 62 29 0 13 74 6 67 1.58e-11 68.2
MsG0480021332.01.T01 AT3G51150 46.104 308 112 10 85 344 153 454 4.71e-58 211
MsG0480021332.01.T01 AT3G51150 53.226 62 29 0 13 74 6 67 1.58e-11 68.2
MsG0480021332.01.T01 AT3G51150 46.104 308 112 10 85 344 153 454 5.00e-58 210
MsG0480021332.01.T01 AT3G51150 53.226 62 29 0 13 74 6 67 1.55e-11 68.2
MsG0480021332.01.T01 AT5G66310 49.466 281 95 8 85 320 154 432 6.97e-58 210
MsG0480021332.01.T01 AT5G66310 49.466 281 95 8 85 320 154 432 6.97e-58 210
MsG0480021332.01.T01 AT5G66310 49.466 281 95 8 85 320 154 432 6.97e-58 210
MsG0480021332.01.T01 AT4G24170 49.286 280 88 11 85 314 138 413 9.46e-55 201
MsG0480021332.01.T01 AT4G24170 49.286 280 88 11 85 314 138 413 9.46e-55 201
MsG0480021332.01.T01 AT3G51150 44.637 289 108 9 104 344 17 301 1.59e-51 191
MsG0480021332.01.T01 AT1G18370 43.682 277 105 10 85 319 165 432 9.69e-39 153
MsG0480021332.01.T01 AT3G43210 41.319 288 109 10 67 305 146 422 5.67e-37 147
MsG0480021332.01.T01 AT3G43210 41.319 288 109 10 67 305 146 422 5.67e-37 147
MsG0480021332.01.T01 AT3G43210 41.319 288 109 10 67 305 146 422 5.67e-37 147
MsG0480021332.01.T01 AT3G43210 41.319 288 109 10 67 305 146 422 5.67e-37 147
MsG0480021332.01.T01 AT3G43210 41.319 288 109 10 67 305 146 422 5.67e-37 147
MsG0480021332.01.T01 AT5G42490 46.970 132 54 6 85 204 143 270 2.33e-14 77.0
MsG0480021332.01.T01 AT5G42490 46.970 132 54 6 85 204 143 270 2.38e-14 77.0
MsG0480021332.01.T01 AT1G59540 30.000 230 104 8 86 269 46 264 2.97e-14 76.6
MsG0480021332.01.T01 AT1G59540 30.000 230 104 8 86 269 138 356 3.18e-14 76.6
MsG0480021332.01.T01 AT3G10180 31.250 208 99 6 132 297 180 385 4.57e-14 76.3
MsG0480021332.01.T01 AT3G10180 31.250 208 99 6 132 297 180 385 4.75e-14 76.3
MsG0480021332.01.T01 AT3G12020 29.778 225 108 7 86 269 204 419 1.40e-12 71.2
MsG0480021332.01.T01 AT3G12020 29.778 225 108 7 86 269 204 419 1.40e-12 71.2
MsG0480021332.01.T01 AT3G12020 29.778 225 108 7 86 269 204 419 2.10e-12 70.9
MsG0480021332.01.T01 AT3G12020 29.778 225 108 7 86 269 204 419 2.10e-12 70.9
MsG0480021332.01.T01 AT1G21730 28.788 264 122 9 86 306 210 450 4.36e-12 69.7
MsG0480021332.01.T01 AT5G06670 29.018 224 111 8 86 269 201 416 4.84e-11 66.6
MsG0480021332.01.T01 AT5G06670 29.018 224 111 8 86 269 201 416 4.84e-11 66.6
MsG0480021332.01.T01 AT5G06670 29.018 224 111 8 86 269 210 425 4.85e-11 66.6
MsG0480021332.01.T01 AT5G06670 29.018 224 111 8 86 269 210 425 4.85e-11 66.6
MsG0480021332.01.T01 AT5G06670 28.821 229 105 9 86 269 201 416 4.99e-11 66.2
MsG0480021332.01.T01 AT5G06670 28.821 229 105 9 86 269 201 416 4.99e-11 66.2
MsG0480021332.01.T01 AT5G06670 28.821 229 105 9 86 269 201 416 4.99e-11 66.2
MsG0480021332.01.T01 AT5G06670 28.821 229 105 9 86 269 201 416 5.43e-11 66.2
MsG0480021332.01.T01 AT2G21380 30.594 219 110 7 86 268 239 451 5.95e-11 66.2
MsG0480021332.01.T01 AT2G21380 30.594 219 110 7 86 268 239 451 5.95e-11 66.2

Find 177 sgRNAs with CRISPR-Local

Find 380 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAACCATCTAAATTTAA+TGG 0.137277 4:-56797552 None:intergenic
CTGGAAGACCAGATGGTTTA+TGG 0.148054 4:+56797517 MsG0480021332.01.T01:CDS
AAGTTCTGCCAGGGAATTTC+TGG 0.153690 4:+56795664 MsG0480021332.01.T01:CDS
CCATTCAATGGGTTTGAAAA+AGG 0.199093 4:+56797489 MsG0480021332.01.T01:CDS
TGCAGCTAGCAGACCGTTTA+TGG 0.204765 4:+56798734 MsG0480021332.01.T01:three_prime_UTR
TTTGGCAGGAAGAAGATTTA+TGG 0.227161 4:+56796928 MsG0480021332.01.T01:intron
TTCCTTCTTGCTGCAAATTA+AGG 0.234058 4:+56799225 MsG0480021332.01.T01:three_prime_UTR
ATTGGCAGACAGAGTATTTC+GGG 0.253890 4:+56794616 MsG0480021332.01.T01:intron
AACGATTCTCAGTCTTCTAT+TGG 0.293108 4:+56797588 MsG0480021332.01.T01:CDS
ACAGTATCTGGAGGGGAAAA+TGG 0.295774 4:+56797295 MsG0480021332.01.T01:intron
ACACATACCAATCTGATAAT+TGG 0.296874 4:-56795560 None:intergenic
TTCAATCCATTAAATTTAGA+TGG 0.309591 4:+56797546 MsG0480021332.01.T01:CDS
TACATTAACCTGTGCTTTAG+TGG 0.313427 4:-56796453 None:intergenic
CATAAACCATCTGGTCTTCC+AGG 0.318695 4:-56797516 None:intergenic
TAAGTAAACTCCGGTTTATA+TGG 0.325660 4:-56795901 None:intergenic
CTCTCCATTTCTCCTGTCTC+AGG 0.330013 4:-56797462 None:intergenic
GAAGGATCAGATATCTAAAA+AGG 0.331016 4:+56796793 MsG0480021332.01.T01:CDS
ATCTCAAGCTGTTGCCTCTA+AGG 0.331700 4:-56797629 None:intergenic
CAATGGAGAGACACTTGTTT+CGG 0.340432 4:-56799086 None:intergenic
AATGGAGAGACACTTGTTTC+GGG 0.349107 4:-56799085 None:intergenic
ATACAAACTACTCACTTTAG+AGG 0.353065 4:+56799054 MsG0480021332.01.T01:three_prime_UTR
GATTGGCAGACAGAGTATTT+CGG 0.363754 4:+56794615 MsG0480021332.01.T01:intron
TCATCCCAGCAACAAAAGTA+TGG 0.377323 4:-56797680 None:intergenic
TTTCCAAGTGCCTACACATT+TGG 0.377835 4:+56794047 MsG0480021332.01.T01:CDS
TGCTAATGAATCTGCAGATT+GGG 0.381276 4:+56793969 MsG0480021332.01.T01:CDS
CTCTGTAGTTTCTCTAGAAC+GGG 0.389736 4:-56795239 None:intergenic
TGCTAATATACGTCTTCATT+AGG 0.391068 4:+56798959 MsG0480021332.01.T01:three_prime_UTR
TTGGCAGGAAGAAGATTTAT+GGG 0.394933 4:+56796929 MsG0480021332.01.T01:intron
AACTTACTACACTAGCTGAT+AGG 0.396765 4:-56795703 None:intergenic
GACCAGTCTAAAGGAGTTCC+TGG 0.404750 4:-56798260 None:intergenic
TTCAAATGTGTAGACATTCC+TGG 0.407068 4:-56797324 None:intergenic
ATTGTATCGTATCGCCATTA+TGG 0.409503 4:+56799159 MsG0480021332.01.T01:three_prime_UTR
CAGGAGCGAGCGTGCATCTC+AGG 0.409955 4:+56795845 MsG0480021332.01.T01:intron
AGAGGAGACTCTACAGGATT+GGG 0.409979 4:+56795258 MsG0480021332.01.T01:CDS
GCATCTCAGGTATCATCAGC+TGG 0.417129 4:+56795858 MsG0480021332.01.T01:CDS
CTGCTAATGAATCTGCAGAT+TGG 0.419350 4:+56793968 MsG0480021332.01.T01:CDS
AGAAGATTCTTGTGTTACTT+AGG 0.420887 4:+56793917 MsG0480021332.01.T01:CDS
GTTCCTGGTGCCTCCTGCAT+TGG 0.421307 4:-56798245 None:intergenic
CCGTCAGTGGATGACCTTAG+AGG 0.426876 4:+56797615 MsG0480021332.01.T01:CDS
ACGAGCCTCAAGGAGATGTT+TGG 0.428680 4:+56798831 MsG0480021332.01.T01:three_prime_UTR
AATCTCACCAATTATCAGAT+TGG 0.429852 4:+56795553 MsG0480021332.01.T01:CDS
GGCAACAGCTTGAGATCATC+TGG 0.430160 4:+56797636 MsG0480021332.01.T01:CDS
AACTTTCTCCATAAACCATC+TGG 0.438525 4:-56797525 None:intergenic
AACTAGAAGCCGGAGTTGTT+CGG 0.440145 4:+56797419 MsG0480021332.01.T01:CDS
TTCCCTGGCAGAACTTTCAA+TGG 0.446524 4:-56795657 None:intergenic
CTATTTAACGAATGGGGCAT+TGG 0.449067 4:+56798688 MsG0480021332.01.T01:CDS
AAAGAAGTTGCCATATAAAC+CGG 0.451334 4:+56795891 MsG0480021332.01.T01:CDS
AACTCTCTAATGCGTATGTT+GGG 0.451837 4:-56796993 None:intergenic
AGACAGTCAAATTCGTCATC+TGG 0.453086 4:-56799192 None:intergenic
CTGGAGAAGAGTTGTCGAAA+TGG 0.453784 4:+56793863 MsG0480021332.01.T01:CDS
TCATTAGGAGTGTGTACAGC+AGG 0.453816 4:+56798974 MsG0480021332.01.T01:three_prime_UTR
ATGGAGAGGACGCCATTCAA+TGG 0.453935 4:+56797477 MsG0480021332.01.T01:CDS
CAGAGGAGACTCTACAGGAT+TGG 0.454015 4:+56795257 MsG0480021332.01.T01:CDS
TATCAGTGTTGCACCATAAA+CGG 0.454876 4:-56798747 None:intergenic
ACTTACTACACTAGCTGATA+GGG 0.460776 4:-56795702 None:intergenic
GAACCTTCACCAATGTATTC+CGG 0.462179 4:-56794020 None:intergenic
TTCCCCTGAGACAGGAGAAA+TGG 0.463457 4:+56797458 MsG0480021332.01.T01:CDS
GGAAAGGCTATTTAACGAAT+GGG 0.466816 4:+56798681 MsG0480021332.01.T01:CDS
TTACCAAATGTGTAGGCACT+TGG 0.468275 4:-56794050 None:intergenic
ATATGAAAGCAGCTTGTTGA+TGG 0.468474 4:+56797722 MsG0480021332.01.T01:CDS
GAAATTTCCTTCTCATTCAA+AGG 0.470020 4:-56793946 None:intergenic
TTCTTGTGTTACTTAGGCTT+AGG 0.470717 4:+56793923 MsG0480021332.01.T01:CDS
CTTCTTTGCAGTATTCATCA+AGG 0.474289 4:-56797186 None:intergenic
CTGTCTCCACTATTATATTG+AGG 0.476344 4:-56797023 None:intergenic
CAATCTCTACATGCCATGTC+AGG 0.480188 4:+56797366 MsG0480021332.01.T01:CDS
TCTCCATTTCTCCTGTCTCA+GGG 0.480908 4:-56797461 None:intergenic
CCTCTGTAGTTTCTCTAGAA+CGG 0.484016 4:-56795240 None:intergenic
TCATAAATTAATCATAATGA+TGG 0.484840 4:-56793569 None:intergenic
AACGTGATCTTGCTGAATCA+AGG 0.488340 4:+56796744 MsG0480021332.01.T01:CDS
TCCTTTGCCCAGAAATTCCC+TGG 0.488533 4:-56795672 None:intergenic
TCAGAGTCCTCAAGCATTTG+TGG 0.489326 4:+56796969 MsG0480021332.01.T01:CDS
AACCTTAATTTGCAGCAAGA+AGG 0.489869 4:-56799227 None:intergenic
TGGAGAGGACGCCATTCAAT+GGG 0.490245 4:+56797478 MsG0480021332.01.T01:CDS
TTATGAAGCTTATGCGGAAG+AGG 0.496180 4:+56798642 MsG0480021332.01.T01:CDS
TAACACGGCGAAGCTATTCA+TGG 0.498028 4:+56798874 MsG0480021332.01.T01:three_prime_UTR
TAATCAGTGTTGGAGGTAGC+AGG 0.499690 4:-56796548 None:intergenic
TAATGTAGTGATGTCTGATA+AGG 0.501558 4:+56796469 MsG0480021332.01.T01:CDS
CTGGTACAACATAACCATAA+TGG 0.502481 4:-56799173 None:intergenic
AACAATCCTCAATATAATAG+TGG 0.503991 4:+56797017 MsG0480021332.01.T01:CDS
TGGAGAAGAGTTGTCGAAAT+GGG 0.504063 4:+56793864 MsG0480021332.01.T01:CDS
GCCAGGGAATTTCTGGGCAA+AGG 0.507390 4:+56795671 MsG0480021332.01.T01:CDS
GCTTAGGCCTTTGAATGAGA+AGG 0.507783 4:+56793939 MsG0480021332.01.T01:CDS
AATACACATATCTATCTCAA+TGG 0.510126 4:-56799103 None:intergenic
AGTTCTGCCAGGGAATTTCT+GGG 0.510390 4:+56795665 MsG0480021332.01.T01:CDS
ATGACTGCTTCCCCTGAGAC+AGG 0.512104 4:+56797450 MsG0480021332.01.T01:CDS
GAAAGATCAACAGATAGAAA+AGG 0.513788 4:+56796589 MsG0480021332.01.T01:CDS
TCGAAATGGGAGAAGATGAA+TGG 0.517570 4:+56793877 MsG0480021332.01.T01:CDS
ATTTGACATGTTTCCTGACA+TGG 0.518750 4:-56797379 None:intergenic
TGTTGCTGGGATGAAAGAAA+TGG 0.520014 4:+56797689 MsG0480021332.01.T01:CDS
CATCTCAGGTATCATCAGCT+GGG 0.520906 4:+56795859 MsG0480021332.01.T01:CDS
AGACCATTGAAAGTTCTGCC+AGG 0.523244 4:+56795654 MsG0480021332.01.T01:intron
TGTTCAACATGACTCCGTGC+AGG 0.523415 4:-56796386 None:intergenic
CAAAGCTACATAATCAGTGT+TGG 0.525785 4:-56796558 None:intergenic
GACACAGTGTGAGAGCTCTT+CGG 0.528394 4:+56798603 MsG0480021332.01.T01:intron
GTATCATCACGCAACCTAAG+TGG 0.528920 4:-56795101 None:intergenic
CTTGCAGCTCAGAGACAAGT+AGG 0.530862 4:+56795503 MsG0480021332.01.T01:intron
GAGAAGATGAATGGAGTTAG+TGG 0.531131 4:+56793886 MsG0480021332.01.T01:CDS
GATCCAATGCAGGAGGCACC+AGG 0.532906 4:+56798242 MsG0480021332.01.T01:CDS
TGAGGATTTGCTGCGCATGG+TGG 0.534211 4:+56796769 MsG0480021332.01.T01:CDS
AACTGCAGAGACCAGTCTAA+AGG 0.537534 4:-56798269 None:intergenic
AAAGAGTTGGCCAGGTTGGA+AGG 0.537609 4:+56796512 MsG0480021332.01.T01:CDS
GTATATTAGCAATGCCACTT+TGG 0.538179 4:-56798947 None:intergenic
ATGGGATTAGCTTGTAATTG+AGG 0.540790 4:+56793797 MsG0480021332.01.T01:five_prime_UTR
AACTACAGAGGAGACTCTAC+AGG 0.540882 4:+56795252 MsG0480021332.01.T01:CDS
TCTTGCTGAATCAAGGATTG+AGG 0.544535 4:+56796751 MsG0480021332.01.T01:CDS
ATCACAAATTAACTAGAAGC+CGG 0.545574 4:+56797409 MsG0480021332.01.T01:CDS
TTGGATTGAATTCAAAGCGC+AGG 0.548324 4:+56798707 MsG0480021332.01.T01:exon
CTGAGGAATGTGAAAGATGT+AGG 0.548594 4:+56798215 MsG0480021332.01.T01:CDS
AGGAAAGGCTATTTAACGAA+TGG 0.553147 4:+56798680 MsG0480021332.01.T01:CDS
CAACCTCAGCTTACGAATGA+CGG 0.553205 4:-56795933 None:intergenic
TTTGCTGCGCATGGTGGGGA+AGG 0.553538 4:+56796775 MsG0480021332.01.T01:CDS
GGCTTTGACAGTATCTGGAG+GGG 0.554999 4:+56797288 MsG0480021332.01.T01:intron
TGTAGGTGTTGATCCAATGC+AGG 0.558725 4:+56798232 MsG0480021332.01.T01:CDS
GAGGATTTGCTGCGCATGGT+GGG 0.558929 4:+56796770 MsG0480021332.01.T01:CDS
GTTCAACATGACTCCGTGCA+GGG 0.560044 4:-56796385 None:intergenic
CAGTGTGAGAGCTCTTCGGC+GGG 0.560979 4:+56798607 MsG0480021332.01.T01:intron
CAATAGTTGCGAGGCTAGTG+AGG 0.563553 4:+56798794 MsG0480021332.01.T01:three_prime_UTR
AGCTACATAATCAGTGTTGG+AGG 0.564822 4:-56796555 None:intergenic
AGAAGTTCGATGTGTCGAGT+TGG 0.565179 4:+56797204 MsG0480021332.01.T01:CDS
AATACAACCCTCTAGAATGT+AGG 0.566519 4:-56799134 None:intergenic
GTACCGGAATACATTGGTGA+AGG 0.568250 4:+56794017 MsG0480021332.01.T01:CDS
GACCATTGAAAGTTCTGCCA+GGG 0.568444 4:+56795655 MsG0480021332.01.T01:intron
ATGGATTTACCAAACGAAGA+AGG 0.570460 4:-56793550 None:intergenic
AGGGGAAAATGGAACAAGCC+AGG 0.572223 4:+56797306 MsG0480021332.01.T01:CDS
ACTATTAACCTACATTCTAG+AGG 0.572333 4:+56799126 MsG0480021332.01.T01:three_prime_UTR
GAACTCTCTAATGCGTATGT+TGG 0.572921 4:-56796994 None:intergenic
CTATTAACCTACATTCTAGA+GGG 0.574371 4:+56799127 MsG0480021332.01.T01:three_prime_UTR
GGATTCCCTGGAAGACCAGA+TGG 0.574754 4:+56797510 MsG0480021332.01.T01:CDS
CAGAGCAGGGACGAGCCTCA+AGG 0.574934 4:+56798821 MsG0480021332.01.T01:three_prime_UTR
CACCAGGAACTCCTTTAGAC+TGG 0.575102 4:+56798258 MsG0480021332.01.T01:CDS
AGTTTACTTACCAAATGTGT+AGG 0.575932 4:-56794057 None:intergenic
AGAGGCTTTCTGAGGAAGAG+AGG 0.579952 4:+56798660 MsG0480021332.01.T01:CDS
TGTGATGCTCCGAACAACTC+CGG 0.580662 4:-56797428 None:intergenic
GCACTGACAACACTCCACTT+AGG 0.581250 4:+56795087 MsG0480021332.01.T01:CDS
CTCCATTTCTCCTGTCTCAG+GGG 0.581535 4:-56797460 None:intergenic
GGATTAGCTTGTAATTGAGG+TGG 0.581728 4:+56793800 MsG0480021332.01.T01:five_prime_UTR
AGTGATGTCTGATAAGGCCT+TGG 0.583008 4:+56796475 MsG0480021332.01.T01:CDS
TTCTATTGGAAGTCCGTCAG+TGG 0.593519 4:+56797602 MsG0480021332.01.T01:CDS
TGGCTTTGACAGTATCTGGA+GGG 0.594075 4:+56797287 MsG0480021332.01.T01:intron
CTTGAGATCATCTGGTGATG+AGG 0.598316 4:+56797644 MsG0480021332.01.T01:CDS
TATGCGGAAGAGGCTTTCTG+AGG 0.600165 4:+56798652 MsG0480021332.01.T01:CDS
GACAGTGGAAGTATTCAAGA+TGG 0.602866 4:+56797041 MsG0480021332.01.T01:CDS
GCTTCACACCTCAGCTAACA+CGG 0.603431 4:+56798859 MsG0480021332.01.T01:three_prime_UTR
AGAAGTTACCACTAAAGCAC+AGG 0.604313 4:+56796445 MsG0480021332.01.T01:CDS
GCGTGATGATACTGAGGTGG+AGG 0.607708 4:+56795112 MsG0480021332.01.T01:CDS
ATAAACCATCTGGTCTTCCA+GGG 0.610955 4:-56797515 None:intergenic
GATTGAGGATTTGCTGCGCA+TGG 0.614235 4:+56796766 MsG0480021332.01.T01:CDS
TTTGCACTTTGAGCCCTGCA+CGG 0.615755 4:+56796372 MsG0480021332.01.T01:CDS
CTTACTACACTAGCTGATAG+GGG 0.618702 4:-56795701 None:intergenic
GAGGAGACTCTACAGGATTG+GGG 0.620881 4:+56795259 MsG0480021332.01.T01:CDS
TAGCTTCGCCGTGTTAGCTG+AGG 0.622747 4:-56798867 None:intergenic
AAATGCTTATGAAGCTTATG+CGG 0.625303 4:+56798636 MsG0480021332.01.T01:CDS
CATGTAGAGATTGTTCATCA+TGG 0.628406 4:-56797356 None:intergenic
CTTTCTGAGGAAGAGAGGAA+AGG 0.634074 4:+56798665 MsG0480021332.01.T01:CDS
CCTCTAAGGTCATCCACTGA+CGG 0.638852 4:-56797615 None:intergenic
TTGGCTTTGACAGTATCTGG+AGG 0.640008 4:+56797286 MsG0480021332.01.T01:intron
TTGCAGCACTCTGCATTACG+TGG 0.640783 4:-56798774 None:intergenic
CATTAGGAGTGTGTACAGCA+GGG 0.646177 4:+56798975 MsG0480021332.01.T01:three_prime_UTR
CAATATAATAGTGGAGACAG+TGG 0.646811 4:+56797026 MsG0480021332.01.T01:CDS
TGGCAGACAGAGTATTTCGG+GGG 0.650929 4:+56794618 MsG0480021332.01.T01:intron
AGGATTTGCTGCGCATGGTG+GGG 0.651154 4:+56796771 MsG0480021332.01.T01:CDS
ATCTCAGGTATCATCAGCTG+GGG 0.651883 4:+56795860 MsG0480021332.01.T01:CDS
GTTGGGACCACAAATGCTTG+AGG 0.665970 4:-56796976 None:intergenic
CTGAGACAGGAGAAATGGAG+AGG 0.668611 4:+56797463 MsG0480021332.01.T01:CDS
ACAGTGTGAGAGCTCTTCGG+CGG 0.670786 4:+56798606 MsG0480021332.01.T01:intron
TCGAAAGAGTAAGTAAACTC+CGG 0.675211 4:-56795910 None:intergenic
TTGGCAGACAGAGTATTTCG+GGG 0.678964 4:+56794617 MsG0480021332.01.T01:intron
AGGAGACTCTACAGGATTGG+GGG 0.680080 4:+56795260 MsG0480021332.01.T01:CDS
AGGTGTTGATCCAATGCAGG+AGG 0.686174 4:+56798235 MsG0480021332.01.T01:CDS
AGAGTGCTGCAATAGTTGCG+AGG 0.694058 4:+56798785 MsG0480021332.01.T01:three_prime_UTR
GAAAGGCTATTTAACGAATG+GGG 0.694405 4:+56798682 MsG0480021332.01.T01:CDS
GGCAGACAGAGTATTTCGGG+GGG 0.711123 4:+56794619 MsG0480021332.01.T01:intron
GTTGCGTGATGATACTGAGG+TGG 0.712725 4:+56795109 MsG0480021332.01.T01:CDS
TAGGTTGCGTGATGATACTG+AGG 0.739839 4:+56795106 MsG0480021332.01.T01:CDS
CCGTTCTAGAGAAACTACAG+AGG 0.742480 4:+56795240 MsG0480021332.01.T01:CDS
GGGAGACAGATAGAAAACTG+AGG 0.753775 4:+56798198 MsG0480021332.01.T01:CDS
TAAGTCCAAACATCTCCTTG+AGG 0.776037 4:-56798836 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTATTAATATTAATGCA+AGG - Chr4:56796902-56796921 None:intergenic 10.0%
!! TATTAATAATTATCTTGATT+TGG + Chr4:56796910-56796929 MsG0480021332.01.T01:intron 10.0%
!! ATAGCTTATTGTTATATATA+TGG + Chr4:56795330-56795349 MsG0480021332.01.T01:intron 15.0%
!! TCATAAATTAATCATAATGA+TGG - Chr4:56793572-56793591 None:intergenic 15.0%
!! TGTATAATTTATATATGTCA+AGG + Chr4:56794911-56794930 MsG0480021332.01.T01:intron 15.0%
!!! TATAAAGATATCTTTTTTAG+AGG - Chr4:56797911-56797930 None:intergenic 15.0%
!! AAAACAAAAAAGAATGACTA+AGG - Chr4:56798921-56798940 None:intergenic 20.0%
!! AATCAGTCCAATATATTAAA+AGG - Chr4:56795144-56795163 None:intergenic 20.0%
!! ACATGATTATATTTATATGC+AGG + Chr4:56798097-56798116 MsG0480021332.01.T01:intron 20.0%
!! ATACAAGGTTTAATACATAA+AGG + Chr4:56795166-56795185 MsG0480021332.01.T01:intron 20.0%
!! ATCAATTACATAAATTGGTA+AGG + Chr4:56794377-56794396 MsG0480021332.01.T01:intron 20.0%
!! ATGAAATTCAAGAAACAATA+AGG - Chr4:56797775-56797794 None:intergenic 20.0%
!! CAAAATAAATTAAACTTCGA+GGG - Chr4:56795968-56795987 None:intergenic 20.0%
!! GCTAAATCAATTACATAAAT+TGG + Chr4:56794372-56794391 MsG0480021332.01.T01:intron 20.0%
!! TCAAAATAAATTAAACTTCG+AGG - Chr4:56795969-56795988 None:intergenic 20.0%
!! TTAATGTTGATATGAACATT+TGG + Chr4:56794328-56794347 MsG0480021332.01.T01:intron 20.0%
!! TTTACCAAAATTTACTATAC+AGG - Chr4:56797086-56797105 None:intergenic 20.0%
!!! AAAATTTTGTTACCAGATAT+AGG + Chr4:56797961-56797980 MsG0480021332.01.T01:intron 20.0%
!!! ACGAATTTTAATTATTCAGA+TGG + Chr4:56796695-56796714 MsG0480021332.01.T01:intron 20.0%
!!! TATAGAGATATCTTTTTTAG+AGG - Chr4:56797942-56797961 None:intergenic 20.0%
!!! TGATATATTTAGAATCTAAG+TGG + Chr4:56798539-56798558 MsG0480021332.01.T01:intron 20.0%
!!! TTTTGAATTTTTGTTGTGAT+TGG + Chr4:56794598-56794617 MsG0480021332.01.T01:intron 20.0%
!!! TTTTGACAGTTTTTTTTTGA+AGG - Chr4:56794426-56794445 None:intergenic 20.0%
! AAAAAGAGATAATTGAACTG+TGG + Chr4:56798303-56798322 MsG0480021332.01.T01:intron 25.0%
! AAAAGTTAAGACCATGTAAT+TGG - Chr4:56794300-56794319 None:intergenic 25.0%
! AAAGTTAAGACCATGTAATT+GGG - Chr4:56794299-56794318 None:intergenic 25.0%
! AACAATCCTCAATATAATAG+TGG + Chr4:56797017-56797036 MsG0480021332.01.T01:CDS 25.0%
! AATACACATATCTATCTCAA+TGG - Chr4:56799106-56799125 None:intergenic 25.0%
! ATTAGCAAACATGGATATAT+GGG + Chr4:56798071-56798090 MsG0480021332.01.T01:intron 25.0%
! ATTTAAACACATCAGATTGA+TGG + Chr4:56794554-56794573 MsG0480021332.01.T01:intron 25.0%
! CATCAAAAAATGTTTCTTTC+AGG - Chr4:56798436-56798455 None:intergenic 25.0%
! CTAAAAGAGAAAAAGTGAAA+CGG - Chr4:56793666-56793685 None:intergenic 25.0%
! GCTAACAAATAAATAATGAC+CGG - Chr4:56797145-56797164 None:intergenic 25.0%
! GGAAACAATCATGATATAAT+TGG - Chr4:56795202-56795221 None:intergenic 25.0%
! GTTGAACCATCTAAATTTAA+TGG - Chr4:56797555-56797574 None:intergenic 25.0%
! TAAAAGAGAAAAAGTGAAAC+GGG - Chr4:56793665-56793684 None:intergenic 25.0%
! TATTAGCAAACATGGATATA+TGG + Chr4:56798070-56798089 MsG0480021332.01.T01:intron 25.0%
! TCACATACTGAAATAAAAGT+AGG - Chr4:56798522-56798541 None:intergenic 25.0%
! TCGATATAAATATCCAAGTT+TGG - Chr4:56794465-56794484 None:intergenic 25.0%
! TTAAATCCATCACTTATTCA+GGG + Chr4:56795734-56795753 MsG0480021332.01.T01:intron 25.0%
! TTCAGATGGATAAGAAATTA+AGG + Chr4:56796709-56796728 MsG0480021332.01.T01:intron 25.0%
! TTGAAAAGTAGTGACTATAA+CGG + Chr4:56795393-56795412 MsG0480021332.01.T01:intron 25.0%
! TTTAAATCCATCACTTATTC+AGG + Chr4:56795733-56795752 MsG0480021332.01.T01:intron 25.0%
!! ATGATACTACAATTTTGTAC+CGG + Chr4:56794001-56794020 MsG0480021332.01.T01:CDS 25.0%
!! GTGAATGCCTTTTAATATAT+TGG + Chr4:56795134-56795153 MsG0480021332.01.T01:intron 25.0%
!!! AATAATTATCTTGATTTGGC+AGG + Chr4:56796914-56796933 MsG0480021332.01.T01:intron 25.0%
!!! ATATTTTGGACTATGCAAAA+AGG + Chr4:56794868-56794887 MsG0480021332.01.T01:intron 25.0%
!!! ATTTTGTTTTTCTCCAAACT+TGG + Chr4:56794449-56794468 MsG0480021332.01.T01:intron 25.0%
!!! CTACTTCTTTCTTTTGTTTA+GGG + Chr4:56798358-56798377 MsG0480021332.01.T01:intron 25.0%
!!! TAAGTCACTTCTTTTTTTAG+AGG + Chr4:56797827-56797846 MsG0480021332.01.T01:intron 25.0%
!!! TACTTCTTTCTTTTGTTTAG+GGG + Chr4:56798359-56798378 MsG0480021332.01.T01:intron 25.0%
!!! TATTTTGGACTATGCAAAAA+GGG + Chr4:56794869-56794888 MsG0480021332.01.T01:intron 25.0%
!!! TTTTCTCTTTTAGGAAACAT+GGG + Chr4:56793673-56793692 MsG0480021332.01.T01:intron 25.0%
!!! TTTTTCTCTTTTAGGAAACA+TGG + Chr4:56793672-56793691 MsG0480021332.01.T01:intron 25.0%
AAAGAAGTTGCCATATAAAC+CGG + Chr4:56795891-56795910 MsG0480021332.01.T01:CDS 30.0%
AAATGCTTATGAAGCTTATG+CGG + Chr4:56798636-56798655 MsG0480021332.01.T01:CDS 30.0%
AATCTCACCAATTATCAGAT+TGG + Chr4:56795553-56795572 MsG0480021332.01.T01:CDS 30.0%
ACAAACAGATTCCATTTACA+TGG + Chr4:56798385-56798404 MsG0480021332.01.T01:intron 30.0%
ACACATACCAATCTGATAAT+TGG - Chr4:56795563-56795582 None:intergenic 30.0%
ACACCTATGTTATCAAAAAG+TGG - Chr4:56794760-56794779 None:intergenic 30.0%
ACGAGCAAATACAAATTTAG+AGG - Chr4:56796870-56796889 None:intergenic 30.0%
ACTATTAACCTACATTCTAG+AGG + Chr4:56799126-56799145 MsG0480021332.01.T01:three_prime_UTR 30.0%
AGTTTACTTACCAAATGTGT+AGG - Chr4:56794060-56794079 None:intergenic 30.0%
ATACAAACTACTCACTTTAG+AGG + Chr4:56799054-56799073 MsG0480021332.01.T01:three_prime_UTR 30.0%
ATCACAAATTAACTAGAAGC+CGG + Chr4:56797409-56797428 MsG0480021332.01.T01:CDS 30.0%
ATTCGTGTTATCAACATGTA+AGG - Chr4:56796681-56796700 None:intergenic 30.0%
CCAAAATTTACTATACAGGA+AGG - Chr4:56797082-56797101 None:intergenic 30.0%
CCTAAAAGAGAAAAGTGAAA+CGG - Chr4:56793757-56793776 None:intergenic 30.0%
CCTAAACAAAAGAAAGAAGT+AGG - Chr4:56798360-56798379 None:intergenic 30.0%
CTAAAAGAGAAAAGTGAAAC+GGG - Chr4:56793756-56793775 None:intergenic 30.0%
CTATACAGGAAGGATATAAA+AGG - Chr4:56797072-56797091 None:intergenic 30.0%
CTATGTTATCAAAAAGTGGA+AGG - Chr4:56794756-56794775 None:intergenic 30.0%
CTATTAACCTACATTCTAGA+GGG + Chr4:56799127-56799146 MsG0480021332.01.T01:three_prime_UTR 30.0%
GAAAGATCAACAGATAGAAA+AGG + Chr4:56796589-56796608 MsG0480021332.01.T01:CDS 30.0%
GAAATTTCCTTCTCATTCAA+AGG - Chr4:56793949-56793968 None:intergenic 30.0%
GAAGGATCAGATATCTAAAA+AGG + Chr4:56796793-56796812 MsG0480021332.01.T01:CDS 30.0%
GTTTGGAAAGTGAGAAAAAT+GGG + Chr4:56793832-56793851 MsG0480021332.01.T01:exon 30.0%
TAAATCCATCACTTATTCAG+GGG + Chr4:56795735-56795754 MsG0480021332.01.T01:intron 30.0%
TAACATAGTGCTTTAACACA+AGG + Chr4:56794972-56794991 MsG0480021332.01.T01:intron 30.0%
TAAGTAAACTCCGGTTTATA+TGG - Chr4:56795904-56795923 None:intergenic 30.0%
TAATGTAGTGATGTCTGATA+AGG + Chr4:56796469-56796488 MsG0480021332.01.T01:CDS 30.0%
TATTGGACTGATTAGATACA+AGG + Chr4:56795151-56795170 MsG0480021332.01.T01:intron 30.0%
TGCTAATATACGTCTTCATT+AGG + Chr4:56798959-56798978 MsG0480021332.01.T01:three_prime_UTR 30.0%
TTATCAACATGTAAGGAGTA+AGG - Chr4:56796674-56796693 None:intergenic 30.0%
TTCCTAGATATTAGCAAACA+TGG + Chr4:56798062-56798081 MsG0480021332.01.T01:intron 30.0%
TTGTGAAGGTAAAAGGATAT+TGG + Chr4:56795306-56795325 MsG0480021332.01.T01:intron 30.0%
! AATTTTGTACCGGAATACAT+TGG + Chr4:56794011-56794030 MsG0480021332.01.T01:CDS 30.0%
! AGATTGAACTCTTTTCATTC+AGG - Chr4:56795538-56795557 None:intergenic 30.0%
! ATCCATGTTTGCTAATATCT+AGG - Chr4:56798067-56798086 None:intergenic 30.0%
! ATGGTTCAACAAGATTTTCA+AGG + Chr4:56797565-56797584 MsG0480021332.01.T01:CDS 30.0%
! ATGTAATTGATTTAGCCAAC+AGG - Chr4:56794368-56794387 None:intergenic 30.0%
! CCTTCCTGTATAGTAAATTT+TGG + Chr4:56797079-56797098 MsG0480021332.01.T01:intron 30.0%
! TATCCTTTTACCTTCACAAA+AGG - Chr4:56795305-56795324 None:intergenic 30.0%
! TATCCTTTTGTGAAGGTAAA+AGG + Chr4:56795299-56795318 MsG0480021332.01.T01:intron 30.0%
! TATTATGTTTGCTAGTTGCT+TGG + Chr4:56794725-56794744 MsG0480021332.01.T01:intron 30.0%
! TCATTCTTTTCTGAATTGCA+GGG + Chr4:56798173-56798192 MsG0480021332.01.T01:intron 30.0%
! TTGTGTTAAAGCACTATGTT+AGG - Chr4:56794973-56794992 None:intergenic 30.0%
! TTTTAATCATTTTCCTCCTC+TGG + Chr4:56799278-56799297 MsG0480021332.01.T01:three_prime_UTR 30.0%
! TTTTACCTTCACAAAAGGAT+AGG - Chr4:56795300-56795319 None:intergenic 30.0%
!! AGAAGATTCTTGTGTTACTT+AGG + Chr4:56793917-56793936 MsG0480021332.01.T01:CDS 30.0%
!! CCTACTTCTTTCTTTTGTTT+AGG + Chr4:56798357-56798376 MsG0480021332.01.T01:intron 30.0%
!! CTTTTCTCTTTTAGGAAACA+TGG + Chr4:56793762-56793781 MsG0480021332.01.T01:intron 30.0%
!! TCTGCAGAATTTTGTTGATT+TGG + Chr4:56795822-56795841 MsG0480021332.01.T01:intron 30.0%
!! TGTTGACATGTGTTTGTTTT+GGG + Chr4:56798581-56798600 MsG0480021332.01.T01:intron 30.0%
!!! AAACATGGGTGTTTTGAAAT+GGG + Chr4:56793687-56793706 MsG0480021332.01.T01:intron 30.0%
!!! AACATGGGTTGTTTTTGAAA+TGG + Chr4:56793778-56793797 MsG0480021332.01.T01:five_prime_UTR 30.0%
!!! ACATGGGTTGTTTTTGAAAT+GGG + Chr4:56793779-56793798 MsG0480021332.01.T01:five_prime_UTR 30.0%
!!! ATTTGCTGTAGCAGATATTT+TGG + Chr4:56794854-56794873 MsG0480021332.01.T01:intron 30.0%
!!! CGTTTCACTTTTTCTCTTTT+AGG + Chr4:56793664-56793683 MsG0480021332.01.T01:five_prime_UTR 30.0%
!!! CTTCCACTTTTTGATAACAT+AGG + Chr4:56794754-56794773 MsG0480021332.01.T01:intron 30.0%
AAACAAACACATGTCAACAC+AGG - Chr4:56798580-56798599 None:intergenic 35.0%
AACAGAGTACATCTAAGCTA+TGG - Chr4:56794276-56794295 None:intergenic 35.0%
AACAGATTCCATTTACATGG+AGG + Chr4:56798388-56798407 MsG0480021332.01.T01:intron 35.0%
AACGATTCTCAGTCTTCTAT+TGG + Chr4:56797588-56797607 MsG0480021332.01.T01:CDS 35.0%
AACTCTCTAATGCGTATGTT+GGG - Chr4:56796996-56797015 None:intergenic 35.0%
AACTTACTACACTAGCTGAT+AGG - Chr4:56795706-56795725 None:intergenic 35.0%
AACTTTCTCCATAAACCATC+TGG - Chr4:56797528-56797547 None:intergenic 35.0%
AATGTGTCTGAATGCAGTAA+GGG + Chr4:56796026-56796045 MsG0480021332.01.T01:intron 35.0%
ACTTACTACACTAGCTGATA+GGG - Chr4:56795705-56795724 None:intergenic 35.0%
AGAACTTTCAATGGTCTGAA+AGG - Chr4:56795651-56795670 None:intergenic 35.0%
AGACAATCACGTTAACTTCA+AGG + Chr4:56798480-56798499 MsG0480021332.01.T01:intron 35.0%
AGGAAAGGCTATTTAACGAA+TGG + Chr4:56798680-56798699 MsG0480021332.01.T01:CDS 35.0%
ATGGATTTACCAAACGAAGA+AGG - Chr4:56793553-56793572 None:intergenic 35.0%
ATTCAGGGGATAAAATAGTC+AGG + Chr4:56795749-56795768 MsG0480021332.01.T01:intron 35.0%
ATTGTATCGTATCGCCATTA+TGG + Chr4:56799159-56799178 MsG0480021332.01.T01:three_prime_UTR 35.0%
ATTTGACATGTTTCCTGACA+TGG - Chr4:56797382-56797401 None:intergenic 35.0%
CAAAGCTACATAATCAGTGT+TGG - Chr4:56796561-56796580 None:intergenic 35.0%
CAAGCAATTGCAAAAAGAGT+TGG + Chr4:56796254-56796273 MsG0480021332.01.T01:intron 35.0%
CATCAAGATGTAGATTGTAG+TGG - Chr4:56798134-56798153 None:intergenic 35.0%
CATGTAGAGATTGTTCATCA+TGG - Chr4:56797359-56797378 None:intergenic 35.0%
CTGCAATTCAGAAAAGAATG+AGG - Chr4:56798174-56798193 None:intergenic 35.0%
CTGGTACAACATAACCATAA+TGG - Chr4:56799176-56799195 None:intergenic 35.0%
CTGTCTCCACTATTATATTG+AGG - Chr4:56797026-56797045 None:intergenic 35.0%
CTTCTTTGCAGTATTCATCA+AGG - Chr4:56797189-56797208 None:intergenic 35.0%
GAAAGGCTATTTAACGAATG+GGG + Chr4:56798682-56798701 MsG0480021332.01.T01:CDS 35.0%
GAGTAGAATTGAATGATGTC+CGG + Chr4:56797123-56797142 MsG0480021332.01.T01:intron 35.0%
GGAAAGGCTATTTAACGAAT+GGG + Chr4:56798681-56798700 MsG0480021332.01.T01:CDS 35.0%
GGGTTTGATACTTCTAAGTT+CGG - Chr4:56794198-56794217 None:intergenic 35.0%
GGTTTGGAAAGTGAGAAAAA+TGG + Chr4:56793831-56793850 MsG0480021332.01.T01:exon 35.0%
GTAATTGAGGTGGAAAAAGA+GGG + Chr4:56793810-56793829 MsG0480021332.01.T01:five_prime_UTR 35.0%
GTCAATTTGTATTTGCCTGT+TGG + Chr4:56794350-56794369 MsG0480021332.01.T01:intron 35.0%
TAATGTGTCTGAATGCAGTA+AGG + Chr4:56796025-56796044 MsG0480021332.01.T01:intron 35.0%
TAATTGCAGATCGCAGAAAA+TGG - Chr4:56795458-56795477 None:intergenic 35.0%
TACATTAACCTGTGCTTTAG+TGG - Chr4:56796456-56796475 None:intergenic 35.0%
TAGTGCTTTAACACAAGGTT+CGG + Chr4:56794977-56794996 MsG0480021332.01.T01:intron 35.0%
TATCAGTGTTGCACCATAAA+CGG - Chr4:56798750-56798769 None:intergenic 35.0%
TCGAAAGAGTAAGTAAACTC+CGG - Chr4:56795913-56795932 None:intergenic 35.0%
TGCTAATGAATCTGCAGATT+GGG + Chr4:56793969-56793988 MsG0480021332.01.T01:CDS 35.0%
TGTAATTGAGGTGGAAAAAG+AGG + Chr4:56793809-56793828 MsG0480021332.01.T01:five_prime_UTR 35.0%
TGTTATCAAAAAGTGGAAGG+TGG - Chr4:56794753-56794772 None:intergenic 35.0%
TTCAAATGTGTAGACATTCC+TGG - Chr4:56797327-56797346 None:intergenic 35.0%
TTCAGGGGATAAAATAGTCA+GGG + Chr4:56795750-56795769 MsG0480021332.01.T01:intron 35.0%
TTCCTTCTTGCTGCAAATTA+AGG + Chr4:56799225-56799244 MsG0480021332.01.T01:three_prime_UTR 35.0%
TTGAAGTTAACGTGATTGTC+TGG - Chr4:56798481-56798500 None:intergenic 35.0%
TTGATACTTCTAAGTTCGGT+CGG - Chr4:56794194-56794213 None:intergenic 35.0%
TTGGCAGGAAGAAGATTTAT+GGG + Chr4:56796929-56796948 MsG0480021332.01.T01:intron 35.0%
TTTATCCCCTGAATAAGTGA+TGG - Chr4:56795743-56795762 None:intergenic 35.0%
TTTGGCAGGAAGAAGATTTA+TGG + Chr4:56796928-56796947 MsG0480021332.01.T01:intron 35.0%
! ACACACTTCTTTTTGCTTGT+TGG + Chr4:56796178-56796197 MsG0480021332.01.T01:intron 35.0%
! CAATATAATAGTGGAGACAG+TGG + Chr4:56797026-56797045 MsG0480021332.01.T01:CDS 35.0%
! CCATTCAATGGGTTTGAAAA+AGG + Chr4:56797489-56797508 MsG0480021332.01.T01:CDS 35.0%
! CTCATTCTTTTCTGAATTGC+AGG + Chr4:56798172-56798191 MsG0480021332.01.T01:intron 35.0%
! GCAGCAAGTATTTTGCATAT+GGG + Chr4:56794791-56794810 MsG0480021332.01.T01:intron 35.0%
! GTATATTAGCAATGCCACTT+TGG - Chr4:56798950-56798969 None:intergenic 35.0%
! TGCAGCAAGTATTTTGCATA+TGG + Chr4:56794790-56794809 MsG0480021332.01.T01:intron 35.0%
! TGTTTCCCTTTTTGTTAGAG+AGG + Chr4:56795215-56795234 MsG0480021332.01.T01:intron 35.0%
! TTTTTGCAATTGCTTGACCA+AGG - Chr4:56796250-56796269 None:intergenic 35.0%
!! AACCTTAATTTGCAGCAAGA+AGG - Chr4:56799230-56799249 None:intergenic 35.0%
!! AATACAACCCTCTAGAATGT+AGG - Chr4:56799137-56799156 None:intergenic 35.0%
!! ATATGAAAGCAGCTTGTTGA+TGG + Chr4:56797722-56797741 MsG0480021332.01.T01:CDS 35.0%
!! ATGGGATTAGCTTGTAATTG+AGG + Chr4:56793797-56793816 MsG0480021332.01.T01:five_prime_UTR 35.0%
!! CCGTTTCACTTTTCTCTTTT+AGG + Chr4:56793754-56793773 MsG0480021332.01.T01:intron 35.0%
!! GTGTTGACATGTGTTTGTTT+TGG + Chr4:56798580-56798599 MsG0480021332.01.T01:intron 35.0%
!! TTCTTGTGTTACTTAGGCTT+AGG + Chr4:56793923-56793942 MsG0480021332.01.T01:CDS 35.0%
!!! CAGAATTTTGTTGATTTGGC+AGG + Chr4:56795826-56795845 MsG0480021332.01.T01:intron 35.0%
!!! CCTTTTTCAAACCCATTGAA+TGG - Chr4:56797492-56797511 None:intergenic 35.0%
!!! CGATGTTTTAATATGTCCAG+AGG - Chr4:56799297-56799316 None:intergenic 35.0%
!!! GAAACATGGGTGTTTTGAAA+TGG + Chr4:56793686-56793705 MsG0480021332.01.T01:intron 35.0%
!!! TGTTTTAATATGTCCAGAGG+AGG - Chr4:56799294-56799313 None:intergenic 35.0%
AAAGAAAGAAGTAGGTCCTG+TGG - Chr4:56798352-56798371 None:intergenic 40.0%
AACGTGATCTTGCTGAATCA+AGG + Chr4:56796744-56796763 MsG0480021332.01.T01:CDS 40.0%
AAGAAAGAAGTAGGTCCTGT+GGG - Chr4:56798351-56798370 None:intergenic 40.0%
AAGAAGTTACCACTAAGCAC+AGG + Chr4:56796203-56796222 MsG0480021332.01.T01:intron 40.0%
AAGCTCTACCTCCATGTAAA+TGG - Chr4:56798399-56798418 None:intergenic 40.0%
AATGGAGAGACACTTGTTTC+GGG - Chr4:56799088-56799107 None:intergenic 40.0%
AATTGCAAAAAGAGTTGGCC+AGG + Chr4:56796259-56796278 MsG0480021332.01.T01:intron 40.0%
AGAAAAATGGGAGCTATTGC+TGG + Chr4:56793844-56793863 MsG0480021332.01.T01:exon 40.0%
AGAAGTTACCACTAAAGCAC+AGG + Chr4:56796445-56796464 MsG0480021332.01.T01:CDS 40.0%
AGACAGTCAAATTCGTCATC+TGG - Chr4:56799195-56799214 None:intergenic 40.0%
CAATGGAGAGACACTTGTTT+CGG - Chr4:56799089-56799108 None:intergenic 40.0%
CTACATTAACCTGTGCTTAG+TGG - Chr4:56796215-56796234 None:intergenic 40.0%
CTATTTAACGAATGGGGCAT+TGG + Chr4:56798688-56798707 MsG0480021332.01.T01:CDS 40.0%
CTGAGGAATGTGAAAGATGT+AGG + Chr4:56798215-56798234 MsG0480021332.01.T01:CDS 40.0%
CTGCTAATGAATCTGCAGAT+TGG + Chr4:56793968-56793987 MsG0480021332.01.T01:CDS 40.0%
CTTACTACACTAGCTGATAG+GGG - Chr4:56795704-56795723 None:intergenic 40.0%
GAAATCGCTCTTTCAGTAGT+CGG + Chr4:56794680-56794699 MsG0480021332.01.T01:intron 40.0%
GAACCTTCACCAATGTATTC+CGG - Chr4:56794023-56794042 None:intergenic 40.0%
GAACTCTCTAATGCGTATGT+TGG - Chr4:56796997-56797016 None:intergenic 40.0%
GACACAGATACGATACTACA+TGG - Chr4:56798023-56798042 None:intergenic 40.0%
GAGAAGATGAATGGAGTTAG+TGG + Chr4:56793886-56793905 MsG0480021332.01.T01:CDS 40.0%
GCAGTGGAAGACATATACTA+TGG + Chr4:56794821-56794840 MsG0480021332.01.T01:intron 40.0%
GCTAATATCTAGGAAACCCA+GGG - Chr4:56798057-56798076 None:intergenic 40.0%
GGTTAATGTAGTGATTGCGA+AGG + Chr4:56796224-56796243 MsG0480021332.01.T01:intron 40.0%
GTACTCTGTTCCCAATTACA+TGG + Chr4:56794286-56794305 MsG0480021332.01.T01:intron 40.0%
GTCAACTTAGAATCTGTAGC+AGG - Chr4:56796305-56796324 None:intergenic 40.0%
GTGGAAGACATATACTATGG+TGG + Chr4:56794824-56794843 MsG0480021332.01.T01:intron 40.0%
GTTACGACAAGTCCTATATC+TGG - Chr4:56797976-56797995 None:intergenic 40.0%
TAAGTCCAAACATCTCCTTG+AGG - Chr4:56798839-56798858 None:intergenic 40.0%
TCAGGGGATAAAATAGTCAG+GGG + Chr4:56795751-56795770 MsG0480021332.01.T01:intron 40.0%
TCATCCCAGCAACAAAAGTA+TGG - Chr4:56797683-56797702 None:intergenic 40.0%
TCGAAATGGGAGAAGATGAA+TGG + Chr4:56793877-56793896 MsG0480021332.01.T01:CDS 40.0%
TCTTGCTGAATCAAGGATTG+AGG + Chr4:56796751-56796770 MsG0480021332.01.T01:CDS 40.0%
TGAAACAAGGCAGGTATATG+AGG + Chr4:56794646-56794665 MsG0480021332.01.T01:intron 40.0%
TGATACTTCTAAGTTCGGTC+GGG - Chr4:56794193-56794212 None:intergenic 40.0%
TGCTAATATCTAGGAAACCC+AGG - Chr4:56798058-56798077 None:intergenic 40.0%
TGGAGAAGAGTTGTCGAAAT+GGG + Chr4:56793864-56793883 MsG0480021332.01.T01:CDS 40.0%
TGTTGCTGGGATGAAAGAAA+TGG + Chr4:56797689-56797708 MsG0480021332.01.T01:CDS 40.0%
TTACCAAATGTGTAGGCACT+TGG - Chr4:56794053-56794072 None:intergenic 40.0%
TTATGAAGCTTATGCGGAAG+AGG + Chr4:56798642-56798661 MsG0480021332.01.T01:CDS 40.0%
TTGGATTGAATTCAAAGCGC+AGG + Chr4:56798707-56798726 MsG0480021332.01.T01:exon 40.0%
TTTCCAAGTGCCTACACATT+TGG + Chr4:56794047-56794066 MsG0480021332.01.T01:CDS 40.0%
! AGCATCCATACTTTTGTTGC+TGG + Chr4:56797675-56797694 MsG0480021332.01.T01:CDS 40.0%
! AGCTACATAATCAGTGTTGG+AGG - Chr4:56796558-56796577 None:intergenic 40.0%
! ATAAACCATCTGGTCTTCCA+GGG - Chr4:56797518-56797537 None:intergenic 40.0%
! ATTGGCAGACAGAGTATTTC+GGG + Chr4:56794616-56794635 MsG0480021332.01.T01:intron 40.0%
! CCTCTGTAGTTTCTCTAGAA+CGG - Chr4:56795243-56795262 None:intergenic 40.0%
! GATTGGCAGACAGAGTATTT+CGG + Chr4:56794615-56794634 MsG0480021332.01.T01:intron 40.0%
! GCATCCATACTTTTGTTGCT+GGG + Chr4:56797676-56797695 MsG0480021332.01.T01:CDS 40.0%
! TCTTTTCTGAATTGCAGGGT+CGG + Chr4:56798177-56798196 MsG0480021332.01.T01:intron 40.0%
! TTTTTACTCTCCTTCCAACC+TGG - Chr4:56796280-56796299 None:intergenic 40.0%
!! CTCTGTAGTTTCTCTAGAAC+GGG - Chr4:56795242-56795261 None:intergenic 40.0%
!! GACAGTGGAAGTATTCAAGA+TGG + Chr4:56797041-56797060 MsG0480021332.01.T01:CDS 40.0%
!! GATTTGGCTTTGACAGTATC+TGG + Chr4:56797283-56797302 MsG0480021332.01.T01:intron 40.0%
!! GGATTAGCTTGTAATTGAGG+TGG + Chr4:56793800-56793819 MsG0480021332.01.T01:five_prime_UTR 40.0%
!!! TTTGTTTTGCGTCTCCAAAG+TGG + Chr4:56798933-56798952 MsG0480021332.01.T01:three_prime_UTR 40.0%
AACTACAGAGGAGACTCTAC+AGG + Chr4:56795252-56795271 MsG0480021332.01.T01:CDS 45.0%
AACTAGAAGCCGGAGTTGTT+CGG + Chr4:56797419-56797438 MsG0480021332.01.T01:CDS 45.0%
AACTGCAGAGACCAGTCTAA+AGG - Chr4:56798272-56798291 None:intergenic 45.0%
AAGTTCTGCCAGGGAATTTC+TGG + Chr4:56795664-56795683 MsG0480021332.01.T01:CDS 45.0%
ACAAGGCAGGTATATGAGGA+AGG + Chr4:56794650-56794669 MsG0480021332.01.T01:intron 45.0%
ACAGTATCTGGAGGGGAAAA+TGG + Chr4:56797295-56797314 MsG0480021332.01.T01:intron 45.0%
ACGGGTCCTCTCTAACAAAA+AGG - Chr4:56795224-56795243 None:intergenic 45.0%
AGAAGTTCGATGTGTCGAGT+TGG + Chr4:56797204-56797223 MsG0480021332.01.T01:CDS 45.0%
AGACCATTGAAAGTTCTGCC+AGG + Chr4:56795654-56795673 MsG0480021332.01.T01:intron 45.0%
AGAGGAGACTCTACAGGATT+GGG + Chr4:56795258-56795277 MsG0480021332.01.T01:CDS 45.0%
AGTGATGTCTGATAAGGCCT+TGG + Chr4:56796475-56796494 MsG0480021332.01.T01:CDS 45.0%
AGTTCTGCCAGGGAATTTCT+GGG + Chr4:56795665-56795684 MsG0480021332.01.T01:CDS 45.0%
ATACTGCAGCCTTGCTTAGT+TGG + Chr4:56796092-56796111 MsG0480021332.01.T01:intron 45.0%
ATCCGTCCTTAAGTGACAAC+GGG + Chr4:56797260-56797279 MsG0480021332.01.T01:intron 45.0%
ATCGTATCTGTGTCCGTACT+AGG + Chr4:56798029-56798048 MsG0480021332.01.T01:intron 45.0%
ATCTCAAGCTGTTGCCTCTA+AGG - Chr4:56797632-56797651 None:intergenic 45.0%
ATCTCAGGTATCATCAGCTG+GGG + Chr4:56795860-56795879 MsG0480021332.01.T01:CDS 45.0%
CAACCTCAGCTTACGAATGA+CGG - Chr4:56795936-56795955 None:intergenic 45.0%
CAATCTCTACATGCCATGTC+AGG + Chr4:56797366-56797385 MsG0480021332.01.T01:CDS 45.0%
CATCTCAGGTATCATCAGCT+GGG + Chr4:56795859-56795878 MsG0480021332.01.T01:CDS 45.0%
CGGGTCCTCTCTAACAAAAA+GGG - Chr4:56795223-56795242 None:intergenic 45.0%
CTAGCATTGCCAACTAAGCA+AGG - Chr4:56796104-56796123 None:intergenic 45.0%
CTGGAAGACCAGATGGTTTA+TGG + Chr4:56797517-56797536 MsG0480021332.01.T01:CDS 45.0%
CTGGAGAAGAGTTGTCGAAA+TGG + Chr4:56793863-56793882 MsG0480021332.01.T01:CDS 45.0%
CTTAAGTGACAACGGGGATT+TGG + Chr4:56797267-56797286 MsG0480021332.01.T01:intron 45.0%
GAATGCAGTAAGGGAAGACA+TGG + Chr4:56796035-56796054 MsG0480021332.01.T01:intron 45.0%
GACCATTGAAAGTTCTGCCA+GGG + Chr4:56795655-56795674 MsG0480021332.01.T01:intron 45.0%
GAGTCTTAATCCTCGTTCCA+GGG - Chr4:56794226-56794245 None:intergenic 45.0%
GATCCGTCCTTAAGTGACAA+CGG + Chr4:56797259-56797278 MsG0480021332.01.T01:intron 45.0%
GCTATGTACCATTAACCCAC+AGG + Chr4:56798333-56798352 MsG0480021332.01.T01:intron 45.0%
GCTTAGGCCTTTGAATGAGA+AGG + Chr4:56793939-56793958 MsG0480021332.01.T01:CDS 45.0%
GGCGTCAGTATCATTGTTCT+TGG + Chr4:56794932-56794951 MsG0480021332.01.T01:intron 45.0%
GGGAGACAGATAGAAAACTG+AGG + Chr4:56798198-56798217 MsG0480021332.01.T01:CDS 45.0%
GGGTTTGAAAAAGGATTCCC+TGG + Chr4:56797498-56797517 MsG0480021332.01.T01:CDS 45.0%
GTACCGGAATACATTGGTGA+AGG + Chr4:56794017-56794036 MsG0480021332.01.T01:CDS 45.0%
GTATCATCACGCAACCTAAG+TGG - Chr4:56795104-56795123 None:intergenic 45.0%
GTCTCTGAGCTGCAAGAATA+AGG - Chr4:56795499-56795518 None:intergenic 45.0%
TAACACGGCGAAGCTATTCA+TGG + Chr4:56798874-56798893 MsG0480021332.01.T01:three_prime_UTR 45.0%
TAGGTTGCGTGATGATACTG+AGG + Chr4:56795106-56795125 MsG0480021332.01.T01:CDS 45.0%
TCAGAGTCCTCAAGCATTTG+TGG + Chr4:56796969-56796988 MsG0480021332.01.T01:CDS 45.0%
TCTCCATTTCTCCTGTCTCA+GGG - Chr4:56797464-56797483 None:intergenic 45.0%
TGAGGTGGAAAAAGAGGGTT+TGG + Chr4:56793815-56793834 MsG0480021332.01.T01:five_prime_UTR 45.0%
TGTTCAACATGACTCGTGCA+GGG - Chr4:56796151-56796170 None:intergenic 45.0%
TTCCCTGGCAGAACTTTCAA+TGG - Chr4:56795660-56795679 None:intergenic 45.0%
TTCTATTGGAAGTCCGTCAG+TGG + Chr4:56797602-56797621 MsG0480021332.01.T01:CDS 45.0%
TTGTTCAACATGACTCGTGC+AGG - Chr4:56796152-56796171 None:intergenic 45.0%
! AAGTAGGTCCTGTGGGTTAA+TGG - Chr4:56798344-56798363 None:intergenic 45.0%
! CAAATCCCCGTTGTCACTTA+AGG - Chr4:56797269-56797288 None:intergenic 45.0%
! CATAAACCATCTGGTCTTCC+AGG - Chr4:56797519-56797538 None:intergenic 45.0%
! CATTAGGAGTGTGTACAGCA+GGG + Chr4:56798975-56798994 MsG0480021332.01.T01:three_prime_UTR 45.0%
! CTAGTGAGGTTTTCAGAGCA+GGG + Chr4:56798808-56798827 MsG0480021332.01.T01:three_prime_UTR 45.0%
! CTTGAGATCATCTGGTGATG+AGG + Chr4:56797644-56797663 MsG0480021332.01.T01:CDS 45.0%
! CTTTCTGAGGAAGAGAGGAA+AGG + Chr4:56798665-56798684 MsG0480021332.01.T01:CDS 45.0%
! CTTTTCTGAATTGCAGGGTC+GGG + Chr4:56798178-56798197 MsG0480021332.01.T01:intron 45.0%
! GAGCTCCTATCCTTTTGTGA+AGG + Chr4:56795292-56795311 MsG0480021332.01.T01:CDS 45.0%
! GTAGTCGGTGGATTTAACTG+TGG + Chr4:56794695-56794714 MsG0480021332.01.T01:intron 45.0%
! TAATCAGTGTTGGAGGTAGC+AGG - Chr4:56796551-56796570 None:intergenic 45.0%
! TCATTAGGAGTGTGTACAGC+AGG + Chr4:56798974-56798993 MsG0480021332.01.T01:three_prime_UTR 45.0%
! TTGGCAGACAGAGTATTTCG+GGG + Chr4:56794617-56794636 MsG0480021332.01.T01:intron 45.0%
!! AAAGCAGCTTGTTGATGGTC+AGG + Chr4:56797727-56797746 MsG0480021332.01.T01:intron 45.0%
!! CCGTTCTAGAGAAACTACAG+AGG + Chr4:56795240-56795259 MsG0480021332.01.T01:CDS 45.0%
!! TGGCTTTGACAGTATCTGGA+GGG + Chr4:56797287-56797306 MsG0480021332.01.T01:intron 45.0%
!! TGTAGGTGTTGATCCAATGC+AGG + Chr4:56798232-56798251 MsG0480021332.01.T01:CDS 45.0%
!! TTGGCTTTGACAGTATCTGG+AGG + Chr4:56797286-56797305 MsG0480021332.01.T01:intron 45.0%
!! TTTTAACTCGCCTTCCAACC+TGG - Chr4:56796525-56796544 None:intergenic 45.0%
AATCCTCGTTCCAGGGAGAA+GGG - Chr4:56794219-56794238 None:intergenic 50.0%
ACGAGCCTCAAGGAGATGTT+TGG + Chr4:56798831-56798850 MsG0480021332.01.T01:three_prime_UTR 50.0%
AGGAGACTCTACAGGATTGG+GGG + Chr4:56795260-56795279 MsG0480021332.01.T01:CDS 50.0%
AGGGGAAAATGGAACAAGCC+AGG + Chr4:56797306-56797325 MsG0480021332.01.T01:CDS 50.0%
AGTATCAAACCCCTTCTCCC+TGG + Chr4:56794206-56794225 MsG0480021332.01.T01:intron 50.0%
ATACTGCAGCCTTGCTTAGG+TGG + Chr4:56796329-56796348 MsG0480021332.01.T01:intron 50.0%
ATCGCTCTTTCAGTAGTCGG+TGG + Chr4:56794683-56794702 MsG0480021332.01.T01:intron 50.0%
ATGGAGAGGACGCCATTCAA+TGG + Chr4:56797477-56797496 MsG0480021332.01.T01:CDS 50.0%
CAATAGTTGCGAGGCTAGTG+AGG + Chr4:56798794-56798813 MsG0480021332.01.T01:three_prime_UTR 50.0%
CACCAGGAACTCCTTTAGAC+TGG + Chr4:56798258-56798277 MsG0480021332.01.T01:CDS 50.0%
CAGAGGAGACTCTACAGGAT+TGG + Chr4:56795257-56795276 MsG0480021332.01.T01:CDS 50.0%
CGAGTCTTAATCCTCGTTCC+AGG - Chr4:56794227-56794246 None:intergenic 50.0%
CTAGCATTGCCACCTAAGCA+AGG - Chr4:56796341-56796360 None:intergenic 50.0%
CTCCATTTCTCCTGTCTCAG+GGG - Chr4:56797463-56797482 None:intergenic 50.0%
CTCTCCATTTCTCCTGTCTC+AGG - Chr4:56797465-56797484 None:intergenic 50.0%
CTGAGACAGGAGAAATGGAG+AGG + Chr4:56797463-56797482 MsG0480021332.01.T01:CDS 50.0%
CTTCTAAGTTCGGTCGGGTT+TGG - Chr4:56794188-56794207 None:intergenic 50.0%
CTTGCAGCTCAGAGACAAGT+AGG + Chr4:56795503-56795522 MsG0480021332.01.T01:intron 50.0%
GACACAGTGTGAGAGCTCTT+CGG + Chr4:56798603-56798622 MsG0480021332.01.T01:intron 50.0%
GACCAGTCTAAAGGAGTTCC+TGG - Chr4:56798263-56798282 None:intergenic 50.0%
GAGGAGACTCTACAGGATTG+GGG + Chr4:56795259-56795278 MsG0480021332.01.T01:CDS 50.0%
GCAAAAAGAGTTGGCCAGGT+TGG + Chr4:56796263-56796282 MsG0480021332.01.T01:intron 50.0%
GCATATGGGCAAACAAGCAG+TGG + Chr4:56794805-56794824 MsG0480021332.01.T01:intron 50.0%
GCATCTCAGGTATCATCAGC+TGG + Chr4:56795858-56795877 MsG0480021332.01.T01:CDS 50.0%
GCTTCACACCTCAGCTAACA+CGG + Chr4:56798859-56798878 MsG0480021332.01.T01:three_prime_UTR 50.0%
GGCAACAGCTTGAGATCATC+TGG + Chr4:56797636-56797655 MsG0480021332.01.T01:CDS 50.0%
GTTCAACATGACTCCGTGCA+GGG - Chr4:56796388-56796407 None:intergenic 50.0%
GTTGCGTGATGATACTGAGG+TGG + Chr4:56795109-56795128 MsG0480021332.01.T01:CDS 50.0%
GTTGGGACCACAAATGCTTG+AGG - Chr4:56796979-56796998 None:intergenic 50.0%
TAATCCTCGTTCCAGGGAGA+AGG - Chr4:56794220-56794239 None:intergenic 50.0%
TATGCGGAAGAGGCTTTCTG+AGG + Chr4:56798652-56798671 MsG0480021332.01.T01:CDS 50.0%
TCCGTCCTTAAGTGACAACG+GGG + Chr4:56797261-56797280 MsG0480021332.01.T01:intron 50.0%
TCCTTTGCCCAGAAATTCCC+TGG - Chr4:56795675-56795694 None:intergenic 50.0%
TCTGGCTGTCTTTCTCAGAC+TGG - Chr4:56798463-56798482 None:intergenic 50.0%
TGCAGCTAGCAGACCGTTTA+TGG + Chr4:56798734-56798753 MsG0480021332.01.T01:three_prime_UTR 50.0%
TGGAGAGGACGCCATTCAAT+GGG + Chr4:56797478-56797497 MsG0480021332.01.T01:CDS 50.0%
TGTAGTGATTGCGAAGGCCT+TGG + Chr4:56796230-56796249 MsG0480021332.01.T01:intron 50.0%
TGTGATGCTCCGAACAACTC+CGG - Chr4:56797431-56797450 None:intergenic 50.0%
TGTTCAACATGACTCCGTGC+AGG - Chr4:56796389-56796408 None:intergenic 50.0%
TTCCCCTGAGACAGGAGAAA+TGG + Chr4:56797458-56797477 MsG0480021332.01.T01:CDS 50.0%
TTGCAGCACTCTGCATTACG+TGG - Chr4:56798777-56798796 None:intergenic 50.0%
TTTGCACTTTGAGCCCTGCA+CGG + Chr4:56796135-56796154 MsG0480021332.01.T01:intron 50.0%
! AAAGAGTTGGCCAGGTTGGA+AGG + Chr4:56796267-56796286 MsG0480021332.01.T01:intron 50.0%
! ACTGGTCTCTGCAGTTCAAG+AGG + Chr4:56798276-56798295 MsG0480021332.01.T01:intron 50.0%
! AGAGGCTTTCTGAGGAAGAG+AGG + Chr4:56798660-56798679 MsG0480021332.01.T01:CDS 50.0%
! GAAACCCAGGGTACCTAGTA+CGG - Chr4:56798045-56798064 None:intergenic 50.0%
! GCACTGACAACACTCCACTT+AGG + Chr4:56795087-56795106 MsG0480021332.01.T01:CDS 50.0%
! GCTAGTGAGGTTTTCAGAGC+AGG + Chr4:56798807-56798826 MsG0480021332.01.T01:three_prime_UTR 50.0%
! GGCTTTGACAGTATCTGGAG+GGG + Chr4:56797288-56797307 MsG0480021332.01.T01:intron 50.0%
! TCCCCGTTGTCACTTAAGGA+CGG - Chr4:56797265-56797284 None:intergenic 50.0%
! TGGCAGACAGAGTATTTCGG+GGG + Chr4:56794618-56794637 MsG0480021332.01.T01:intron 50.0%
!! AGAGTGCTGCAATAGTTGCG+AGG + Chr4:56798785-56798804 MsG0480021332.01.T01:three_prime_UTR 50.0%
!! AGGTGTTGATCCAATGCAGG+AGG + Chr4:56798235-56798254 MsG0480021332.01.T01:CDS 50.0%
!! CCTCTAAGGTCATCCACTGA+CGG - Chr4:56797618-56797637 None:intergenic 50.0%
!! GATTGAGGATTTGCTGCGCA+TGG + Chr4:56796766-56796785 MsG0480021332.01.T01:CDS 50.0%
ACAGTGTGAGAGCTCTTCGG+CGG + Chr4:56798606-56798625 MsG0480021332.01.T01:intron 55.0%
ATCCTCGTTCCAGGGAGAAG+GGG - Chr4:56794218-56794237 None:intergenic 55.0%
ATGACTGCTTCCCCTGAGAC+AGG + Chr4:56797450-56797469 MsG0480021332.01.T01:CDS 55.0%
CCGTCAGTGGATGACCTTAG+AGG + Chr4:56797615-56797634 MsG0480021332.01.T01:CDS 55.0%
CGACCGTCATTCGTAAGCTG+AGG + Chr4:56795930-56795949 MsG0480021332.01.T01:intron 55.0%
CGCATACTGCAGCCTTGCTT+AGG + Chr4:56796089-56796108 MsG0480021332.01.T01:intron 55.0%
GCGTGATGATACTGAGGTGG+AGG + Chr4:56795112-56795131 MsG0480021332.01.T01:CDS 55.0%
GGATTCCCTGGAAGACCAGA+TGG + Chr4:56797510-56797529 MsG0480021332.01.T01:CDS 55.0%
GTGTCCGTACTAGGTACCCT+GGG + Chr4:56798038-56798057 MsG0480021332.01.T01:intron 55.0%
TAGCTTCGCCGTGTTAGCTG+AGG - Chr4:56798870-56798889 None:intergenic 55.0%
TGTGTCCGTACTAGGTACCC+TGG + Chr4:56798037-56798056 MsG0480021332.01.T01:intron 55.0%
TTCGGGGGGACTGTGAAACA+AGG + Chr4:56794633-56794652 MsG0480021332.01.T01:CDS 55.0%
! GCCAGGGAATTTCTGGGCAA+AGG + Chr4:56795671-56795690 MsG0480021332.01.T01:CDS 55.0%
! GGCAGACAGAGTATTTCGGG+GGG + Chr4:56794619-56794638 MsG0480021332.01.T01:intron 55.0%
!! AGGATTTGCTGCGCATGGTG+GGG + Chr4:56796771-56796790 MsG0480021332.01.T01:CDS 55.0%
!! GAGGATTTGCTGCGCATGGT+GGG + Chr4:56796770-56796789 MsG0480021332.01.T01:CDS 55.0%
!! TGAGGATTTGCTGCGCATGG+TGG + Chr4:56796769-56796788 MsG0480021332.01.T01:CDS 55.0%
AACCCCTTCTCCCTGGAACG+AGG + Chr4:56794213-56794232 MsG0480021332.01.T01:intron 60.0%
CAGTGTGAGAGCTCTTCGGC+GGG + Chr4:56798607-56798626 MsG0480021332.01.T01:intron 60.0%
GGGGGACTGTGAAACAAGGC+AGG + Chr4:56794637-56794656 MsG0480021332.01.T01:CDS 60.0%
GTTCCTGGTGCCTCCTGCAT+TGG - Chr4:56798248-56798267 None:intergenic 60.0%
! TTTGCTGCGCATGGTGGGGA+AGG + Chr4:56796775-56796794 MsG0480021332.01.T01:CDS 60.0%
!! GATCCAATGCAGGAGGCACC+AGG + Chr4:56798242-56798261 MsG0480021332.01.T01:CDS 60.0%
CAGAGCAGGGACGAGCCTCA+AGG + Chr4:56798821-56798840 MsG0480021332.01.T01:three_prime_UTR 65.0%
CAGGAGCGAGCGTGCATCTC+AGG + Chr4:56795845-56795864 MsG0480021332.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 56793549 56799344 56793549 ID=MsG0480021332.01;Name=MsG0480021332.01
Chr4 mRNA 56793549 56799344 56793549 ID=MsG0480021332.01.T01;Parent=MsG0480021332.01;Name=MsG0480021332.01.T01;_AED=0.24;_eAED=0.25;_QI=211|0.28|0.46|1|0.92|0.86|15|629|595
Chr4 exon 56793549 56793685 56793549 ID=MsG0480021332.01.T01:exon:6467;Parent=MsG0480021332.01.T01
Chr4 exon 56793776 56794068 56793776 ID=MsG0480021332.01.T01:exon:6468;Parent=MsG0480021332.01.T01
Chr4 exon 56794624 56794658 56794624 ID=MsG0480021332.01.T01:exon:6469;Parent=MsG0480021332.01.T01
Chr4 exon 56795076 56795133 56795076 ID=MsG0480021332.01.T01:exon:6470;Parent=MsG0480021332.01.T01
Chr4 exon 56795233 56795313 56795233 ID=MsG0480021332.01.T01:exon:6471;Parent=MsG0480021332.01.T01
Chr4 exon 56795515 56795574 56795515 ID=MsG0480021332.01.T01:exon:6472;Parent=MsG0480021332.01.T01
Chr4 exon 56795656 56795718 56795656 ID=MsG0480021332.01.T01:exon:6473;Parent=MsG0480021332.01.T01
Chr4 exon 56795848 56795941 56795848 ID=MsG0480021332.01.T01:exon:6474;Parent=MsG0480021332.01.T01
Chr4 exon 56796348 56796610 56796348 ID=MsG0480021332.01.T01:exon:6475;Parent=MsG0480021332.01.T01
Chr4 exon 56796731 56796814 56796731 ID=MsG0480021332.01.T01:exon:6476;Parent=MsG0480021332.01.T01
Chr4 exon 56796936 56797062 56796936 ID=MsG0480021332.01.T01:exon:6477;Parent=MsG0480021332.01.T01
Chr4 exon 56797164 56797230 56797164 ID=MsG0480021332.01.T01:exon:6478;Parent=MsG0480021332.01.T01
Chr4 exon 56797299 56797743 56797299 ID=MsG0480021332.01.T01:exon:6479;Parent=MsG0480021332.01.T01
Chr4 exon 56798194 56798279 56798194 ID=MsG0480021332.01.T01:exon:6480;Parent=MsG0480021332.01.T01
Chr4 exon 56798610 56799344 56798610 ID=MsG0480021332.01.T01:exon:6481;Parent=MsG0480021332.01.T01
Chr4 five_prime_UTR 56793549 56793685 56793549 ID=MsG0480021332.01.T01:five_prime_utr;Parent=MsG0480021332.01.T01
Chr4 five_prime_UTR 56793776 56793849 56793776 ID=MsG0480021332.01.T01:five_prime_utr;Parent=MsG0480021332.01.T01
Chr4 CDS 56793850 56794068 56793850 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56794624 56794658 56794624 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56795076 56795133 56795076 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56795233 56795313 56795233 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56795515 56795574 56795515 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56795656 56795718 56795656 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56795848 56795941 56795848 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56796348 56796610 56796348 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56796731 56796814 56796731 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56796936 56797062 56796936 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56797164 56797230 56797164 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56797299 56797743 56797299 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56798194 56798279 56798194 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 CDS 56798610 56798715 56798610 ID=MsG0480021332.01.T01:cds;Parent=MsG0480021332.01.T01
Chr4 three_prime_UTR 56798716 56799344 56798716 ID=MsG0480021332.01.T01:three_prime_utr;Parent=MsG0480021332.01.T01
Gene Sequence

>MsG0480021332.01.T01

ATGGGAGCTATTGCTGGAGAAGAGTTGTCGAAATGGGAGAAGATGAATGGAGTTAGTGGTTGTGAAGAGAAGATTCTTGTGTTACTTAGGCTTAGGCCTTTGAATGAGAAGGAAATTTCTGCTAATGAATCTGCAGATTGGGAATGTATTAATGATACTACAATTTTGTACCGGAATACATTGGTGAAGGTTCTACGTTTCCAAGTGCCTACACATTTGACAGAGTATTTCGGGGGGACTGTGAAACAAGGCAGAGATCTTCTCAGCACTGACAACACTCCACTTAGGTTGCGTGATGATACTGAGGTGGAGAGAGGACCCGTTCTAGAGAAACTACAGAGGAGACTCTACAGGATTGGGGGCATTTTCAAGAGCTCCTATCCTTTTGTGAAGAGACAAGTAGGAGAGACATACCTGAATGAAAAGAGTTCAATCTCACCAATTATCAGATTGACCATTGAAAGTTCTGCCAGGGAATTTCTGGGCAAAGGAAACTCACCCCTATCAGCTAGTGTAGAGCGAGCGTGCATCTCAGGTATCATCAGCTGGGGTGAGATTGAAAGAAGTTGCCATATAAACCGGAGTTTACTTACTCTTTCGACCGTCATTCGTGGCAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGGAGTCATGTTGAACAAACTAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTTACCACTAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAATTGCAAAAAGAGTTGGCCAGGTTGGAAGGCGAGTTAAAAACTCCTGCTACCTCCAACACTGATTATGTAGCTTTGTTGAGAAAGAAAGATCAACAGATAGAAAAGGAGCTAACTAAGCAACGTGATCTTGCTGAATCAAGGATTGAGGATTTGCTGCGCATGGTGGGGAAGGATCAGATATCTAAAAAGGAAGAAGATTTATGGGAAGATGACTGTTCAGTATCAGAGTCCTCAAGCATTTGTGGTCCCAACATACGCATTAGAGAGTTCAACAATCCTCAATATAATAGTGGAGACAGTGGAAGTATTCAAGATGCTTTTGCTTGTACAGAAGAAGACCTTGATGAATACTGCAAAGAAGTTCGATGTGTCGAGTTGGAAGATATCTGGAGGGGAAAATGGAACAAGCCAGGAATGTCTACACATTTGAATGAAGACAGCCATGATGAACAATCTCTACATGCCATGTCAGGAAACATGTCAAATTATAGAAATCACAAATTAACTAGAAGCCGGAGTTGTTCGGAGCATCACATGACTGCTTCCCCTGAGACAGGAGAAATGGAGAGGACGCCATTCAATGGGTTTGAAAAAGGATTCCCTGGAAGACCAGATGGTTTATGGAGAAAGTTCAATCCATTAAATTTAGATGGTTCAACAAGATTTTCAAGGAACGATTCTCAGTCTTCTATTGGAAGTCCGTCAGTGGATGACCTTAGAGGCAACAGCTTGAGATCATCTGGTGATGAGGACATTACTAGCATCCATACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACTTGAATATGAAAGCAGCTTGTTGATGGGTCGGGAGACAGATAGAAAACTGAGGAATGTGAAAGATGTAGGTGTTGATCCAATGCAGGAGGCACCAGGAACTCCTTTAGACTGTGTGAGAGCTCTTCGGCGGGAGAAAGAAATGCTTATGAAGCTTATGCGGAAGAGGCTTTCTGAGGAAGAGAGGAAAGGCTATTTAACGAATGGGGCATTGGATTGA
Protein sequence

>MsG0480021332.01.T01

MGAIAGEELSKWEKMNGVSGCEEKILVLLRLRPLNEKEISANESADWECINDTTILYRNTLVKVLRFQVPTHLTEYFGGTVKQGRDLLSTDNTPLRLRDDTEVERGPVLEKLQRRLYRIGGIFKSSYPFVKRQVGETYLNEKSSISPIIRLTIESSAREFLGKGNSPLSASVERACISGIISWGEIERSCHINRSLLTLSTVIRGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKELARLEGELKTPATSNTDYVALLRKKDQQIEKELTKQRDLAESRIEDLLRMVGKDQISKKEEDLWEDDCSVSESSSICGPNIRIREFNNPQYNSGDSGSIQDAFACTEEDLDEYCKEVRCVELEDIWRGKWNKPGMSTHLNEDSHDEQSLHAMSGNMSNYRNHKLTRSRSCSEHHMTASPETGEMERTPFNGFEKGFPGRPDGLWRKFNPLNLDGSTRFSRNDSQSSIGSPSVDDLRGNSLRSSGDEDITSIHTFVAGMKEMVKLEYESSLLMGRETDRKLRNVKDVGVDPMQEAPGTPLDCVRALRREKEMLMKLMRKRLSEEERKGYLTNGALD*