Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027999.01.T01 | XP_003614532.1 | 99.115 | 226 | 2 | 0 | 1 | 226 | 1 | 226 | 3.17E-160 | 452 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027999.01.T01 | Q9FX64 | 75.664 | 226 | 55 | 0 | 1 | 226 | 1 | 226 | 1.87E-124 | 354 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027999.01.T01 | G7JZE5 | 99.115 | 226 | 2 | 0 | 1 | 226 | 1 | 226 | 1.52e-160 | 452 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048404.01 | MsG0580027999.01 | 0.821589 | 3.725615e-53 | 3.043722e-50 |
MsG0080048618.01 | MsG0580027999.01 | 0.803577 | 3.262795e-49 | 1.645582e-46 |
MsG0080048774.01 | MsG0580027999.01 | 0.809908 | 1.499206e-50 | 8.912547e-48 |
MsG0080048784.01 | MsG0580027999.01 | 0.815425 | 9.307369e-52 | 6.414671e-49 |
MsG0080048856.01 | MsG0580027999.01 | 0.817296 | 3.549311e-52 | 2.574692e-49 |
MsG0080049148.01 | MsG0580027999.01 | 0.806806 | 6.880018e-50 | 3.769676e-47 |
MsG0180000139.01 | MsG0580027999.01 | 0.843864 | 1.078005e-58 | 1.709460e-55 |
MsG0180000145.01 | MsG0580027999.01 | 0.809607 | 1.740085e-50 | 1.026338e-47 |
MsG0180000335.01 | MsG0580027999.01 | 0.840195 | 1.006589e-57 | 1.423099e-54 |
MsG0180000470.01 | MsG0580027999.01 | 0.826870 | 2.139650e-54 | 2.031528e-51 |
MsG0180000835.01 | MsG0580027999.01 | 0.808235 | 3.420836e-50 | 1.945632e-47 |
MsG0180000836.01 | MsG0580027999.01 | 0.812994 | 3.203689e-51 | 2.067084e-48 |
MsG0180001153.01 | MsG0580027999.01 | 0.806449 | 8.180314e-50 | 4.441401e-47 |
MsG0180001892.01 | MsG0580027999.01 | 0.814039 | 1.886778e-51 | 1.252420e-48 |
MsG0180002100.01 | MsG0580027999.01 | 0.807438 | 5.053667e-50 | 2.814838e-47 |
MsG0180002377.01 | MsG0580027999.01 | 0.840023 | 1.116069e-57 | 1.569674e-54 |
MsG0180002492.01 | MsG0580027999.01 | 0.803182 | 3.939050e-49 | 1.966478e-46 |
MsG0180002547.01 | MsG0580027999.01 | 0.805497 | 1.297246e-49 | 6.873425e-47 |
MsG0180003188.01 | MsG0580027999.01 | 0.811368 | 7.249834e-51 | 4.479312e-48 |
MsG0180003455.01 | MsG0580027999.01 | 0.805960 | 1.037151e-49 | 5.561301e-47 |
MsG0180003493.01 | MsG0580027999.01 | 0.823949 | 1.051440e-53 | 9.185387e-51 |
MsG0180003651.01 | MsG0580027999.01 | 0.844351 | 7.977616e-59 | 1.284387e-55 |
MsG0180003773.01 | MsG0580027999.01 | 0.808360 | 3.217680e-50 | 1.836146e-47 |
MsG0180003885.01 | MsG0580027999.01 | 0.803071 | 4.151624e-49 | 2.066636e-46 |
MsG0180003920.01 | MsG0580027999.01 | 0.816991 | 4.157032e-52 | 2.990712e-49 |
MsG0180003951.01 | MsG0580027999.01 | 0.817218 | 3.695479e-52 | 2.675078e-49 |
MsG0180004389.01 | MsG0580027999.01 | 0.819462 | 1.146734e-52 | 8.830847e-50 |
MsG0180004463.01 | MsG0580027999.01 | 0.826667 | 2.391756e-54 | 2.257765e-51 |
MsG0180004481.01 | MsG0580027999.01 | 0.825709 | 4.043449e-54 | 3.714152e-51 |
MsG0180004482.01 | MsG0580027999.01 | 0.835646 | 1.486116e-56 | 1.828648e-53 |
MsG0180004743.01 | MsG0580027999.01 | 0.804573 | 2.024882e-49 | 1.047660e-46 |
MsG0180004765.01 | MsG0580027999.01 | 0.824375 | 8.352553e-54 | 7.384671e-51 |
MsG0180004769.01 | MsG0580027999.01 | 0.807477 | 4.959576e-50 | 2.765212e-47 |
MsG0180004975.01 | MsG0580027999.01 | 0.812812 | 3.511163e-51 | 2.254386e-48 |
MsG0180005153.01 | MsG0580027999.01 | 0.814514 | 1.482094e-51 | 9.965673e-49 |
MsG0180005575.01 | MsG0580027999.01 | 0.827743 | 1.321924e-54 | 1.287506e-51 |
MsG0180005664.01 | MsG0580027999.01 | 0.802679 | 5.003621e-49 | 2.466078e-46 |
MsG0180005763.01 | MsG0580027999.01 | 0.837756 | 4.307612e-57 | 5.651437e-54 |
MsG0180005962.01 | MsG0580027999.01 | -0.813958 | 1.966149e-51 | 1.302194e-48 |
MsG0180006017.01 | MsG0580027999.01 | 0.818776 | 1.642603e-52 | 1.241116e-49 |
MsG0280006299.01 | MsG0580027999.01 | 0.804356 | 2.246374e-49 | 1.155824e-46 |
MsG0280006405.01 | MsG0580027999.01 | 0.809384 | 1.943544e-50 | 1.139512e-47 |
MsG0280010776.01 | MsG0580027999.01 | 0.811941 | 5.442521e-51 | 3.414065e-48 |
MsG0280010778.01 | MsG0580027999.01 | 0.838678 | 2.492899e-57 | 3.363616e-54 |
MsG0280010980.01 | MsG0580027999.01 | 0.813272 | 2.784202e-51 | 1.809930e-48 |
MsG0280011014.01 | MsG0580027999.01 | 0.824344 | 8.490975e-54 | 7.500273e-51 |
MsG0280011101.01 | MsG0580027999.01 | 0.812872 | 3.407457e-51 | 2.191274e-48 |
MsG0280011339.01 | MsG0580027999.01 | 0.825712 | 4.037270e-54 | 3.708752e-51 |
MsG0280011341.01 | MsG0580027999.01 | 0.816217 | 6.195672e-52 | 4.363927e-49 |
MsG0280011416.01 | MsG0580027999.01 | 0.810693 | 1.015411e-50 | 6.162696e-48 |
MsG0380011581.01 | MsG0580027999.01 | 0.816943 | 4.261223e-52 | 3.061705e-49 |
MsG0380012067.01 | MsG0580027999.01 | 0.827255 | 1.730343e-54 | 1.661682e-51 |
MsG0380012103.01 | MsG0580027999.01 | 0.822127 | 2.796900e-53 | 2.320323e-50 |
MsG0380012122.01 | MsG0580027999.01 | 0.802610 | 5.169142e-49 | 2.543255e-46 |
MsG0380012460.01 | MsG0580027999.01 | 0.802336 | 5.889137e-49 | 2.877354e-46 |
MsG0380013085.01 | MsG0580027999.01 | 0.802654 | 5.062361e-49 | 2.493422e-46 |
MsG0380013183.01 | MsG0580027999.01 | 0.819570 | 1.083474e-52 | 8.368777e-50 |
MsG0380013475.01 | MsG0580027999.01 | 0.825507 | 4.513791e-54 | 4.122229e-51 |
MsG0380013549.01 | MsG0580027999.01 | 0.804218 | 2.400858e-49 | 1.230868e-46 |
MsG0380014537.01 | MsG0580027999.01 | 0.806173 | 9.355555e-50 | 5.043882e-47 |
MsG0380014703.01 | MsG0580027999.01 | 0.809022 | 2.323851e-50 | 1.349255e-47 |
MsG0380014876.01 | MsG0580027999.01 | 0.824412 | 8.185560e-54 | 7.244500e-51 |
MsG0480018465.01 | MsG0580027999.01 | 0.815112 | 1.092466e-51 | 7.464583e-49 |
MsG0480018894.01 | MsG0580027999.01 | 0.806660 | 7.384512e-50 | 4.030727e-47 |
MsG0480019206.01 | MsG0580027999.01 | 0.811078 | 8.379394e-51 | 5.137977e-48 |
MsG0480019409.01 | MsG0580027999.01 | 0.801082 | 1.064808e-48 | 5.039922e-46 |
MsG0480019710.01 | MsG0580027999.01 | 0.815353 | 9.656037e-52 | 6.641870e-49 |
MsG0480020136.01 | MsG0580027999.01 | 0.807669 | 4.514521e-50 | 2.529600e-47 |
MsG0480020739.01 | MsG0580027999.01 | 0.830837 | 2.345561e-55 | 2.500442e-52 |
MsG0480020879.01 | MsG0580027999.01 | 0.807587 | 4.699793e-50 | 2.627699e-47 |
MsG0480020887.01 | MsG0580027999.01 | 0.806707 | 7.219015e-50 | 3.945246e-47 |
MsG0480020909.01 | MsG0580027999.01 | 0.826064 | 3.329605e-54 | 3.089430e-51 |
MsG0480021037.01 | MsG0580027999.01 | 0.813754 | 2.181373e-51 | 1.436747e-48 |
MsG0480021056.01 | MsG0580027999.01 | 0.813884 | 2.041367e-51 | 1.349332e-48 |
MsG0480021195.01 | MsG0580027999.01 | 0.800942 | 1.137400e-48 | 5.364426e-46 |
MsG0480021501.01 | MsG0580027999.01 | 0.809691 | 1.669214e-50 | 9.866918e-48 |
MsG0480021536.01 | MsG0580027999.01 | 0.808806 | 2.583911e-50 | 1.491653e-47 |
MsG0480021796.01 | MsG0580027999.01 | 0.822616 | 2.153513e-53 | 1.811849e-50 |
MsG0480021870.01 | MsG0580027999.01 | 0.805854 | 1.091871e-49 | 5.838965e-47 |
MsG0480022045.01 | MsG0580027999.01 | 0.803490 | 3.399800e-49 | 1.710805e-46 |
MsG0480022549.01 | MsG0580027999.01 | 0.807988 | 3.861859e-50 | 2.182100e-47 |
MsG0480022877.01 | MsG0580027999.01 | 0.813349 | 2.677214e-51 | 1.744144e-48 |
MsG0480023163.01 | MsG0580027999.01 | 0.817428 | 3.314366e-52 | 2.413158e-49 |
MsG0480023221.01 | MsG0580027999.01 | 0.827953 | 1.176711e-54 | 1.153204e-51 |
MsG0480023354.01 | MsG0580027999.01 | 0.817999 | 2.464418e-52 | 1.822538e-49 |
MsG0480023463.01 | MsG0580027999.01 | 0.864923 | 8.570220e-65 | 2.737202e-61 |
MsG0480023488.01 | MsG0580027999.01 | 0.811631 | 6.357173e-51 | 3.954973e-48 |
MsG0480023503.01 | MsG0580027999.01 | 0.805240 | 1.468976e-49 | 7.732040e-47 |
MsG0480023636.01 | MsG0580027999.01 | 0.813120 | 3.006225e-51 | 1.946116e-48 |
MsG0580024161.01 | MsG0580027999.01 | 0.813265 | 2.793670e-51 | 1.815735e-48 |
MsG0580024197.01 | MsG0580027999.01 | 0.830296 | 3.181143e-55 | 3.337740e-52 |
MsG0580024382.01 | MsG0580027999.01 | 0.800152 | 1.647714e-48 | 7.616636e-46 |
MsG0580024690.01 | MsG0580027999.01 | 0.803321 | 3.685686e-49 | 1.846532e-46 |
MsG0580025135.01 | MsG0580027999.01 | 0.832465 | 9.307467e-56 | 1.041153e-52 |
MsG0580025814.01 | MsG0580027999.01 | 0.821526 | 3.853178e-53 | 3.142334e-50 |
MsG0580025816.01 | MsG0580027999.01 | 0.829529 | 4.891953e-55 | 5.019968e-52 |
MsG0380014948.01 | MsG0580027999.01 | 0.842380 | 2.678461e-58 | 4.054129e-55 |
MsG0380015332.01 | MsG0580027999.01 | 0.819876 | 9.226198e-53 | 7.187237e-50 |
MsG0380015440.01 | MsG0580027999.01 | 0.817424 | 3.322443e-52 | 2.418723e-49 |
MsG0380015463.01 | MsG0580027999.01 | 0.811281 | 7.570896e-51 | 4.666873e-48 |
MsG0380015555.01 | MsG0580027999.01 | 0.810867 | 9.311716e-51 | 5.677791e-48 |
MsG0380015566.01 | MsG0580027999.01 | 0.805604 | 1.232222e-49 | 6.546761e-47 |
MsG0380015677.01 | MsG0580027999.01 | 0.808478 | 3.036775e-50 | 1.738219e-47 |
MsG0380015720.01 | MsG0580027999.01 | 0.819831 | 9.445971e-53 | 7.349195e-50 |
MsG0380015875.01 | MsG0580027999.01 | 0.824185 | 9.254416e-54 | 8.138411e-51 |
MsG0380016126.01 | MsG0580027999.01 | 0.843709 | 1.186223e-58 | 1.871764e-55 |
MsG0380016247.01 | MsG0580027999.01 | 0.828782 | 7.422955e-55 | 7.451844e-52 |
MsG0380016407.01 | MsG0580027999.01 | 0.809581 | 1.763006e-50 | 1.039114e-47 |
MsG0380016505.01 | MsG0580027999.01 | 0.821774 | 3.376938e-53 | 2.773488e-50 |
MsG0380016529.01 | MsG0580027999.01 | 0.804114 | 2.523327e-49 | 1.290264e-46 |
MsG0380016671.01 | MsG0580027999.01 | 0.825403 | 4.778495e-54 | 4.351123e-51 |
MsG0380016910.01 | MsG0580027999.01 | 0.843893 | 1.058910e-58 | 1.680808e-55 |
MsG0380016970.01 | MsG0580027999.01 | 0.804959 | 1.681897e-49 | 8.789716e-47 |
MsG0380017461.01 | MsG0580027999.01 | 0.807208 | 5.654378e-50 | 3.130685e-47 |
MsG0380017498.01 | MsG0580027999.01 | 0.814540 | 1.462520e-51 | 9.840647e-49 |
MsG0480018124.01 | MsG0580027999.01 | 0.845922 | 3.001466e-59 | 5.080989e-56 |
MsG0480018163.01 | MsG0580027999.01 | 0.806205 | 9.212092e-50 | 4.970664e-47 |
MsG0480018183.01 | MsG0580027999.01 | 0.804796 | 1.818932e-49 | 9.465907e-47 |
MsG0480018251.01 | MsG0580027999.01 | 0.800495 | 1.403159e-48 | 6.542929e-46 |
MsG0480018278.01 | MsG0580027999.01 | 0.826397 | 2.774553e-54 | 2.599016e-51 |
MsG0580027361.01 | MsG0580027999.01 | 0.804623 | 1.976630e-49 | 1.023991e-46 |
MsG0580027650.01 | MsG0580027999.01 | 0.800562 | 1.360040e-48 | 6.352557e-46 |
MsG0580027922.01 | MsG0580027999.01 | 0.819731 | 9.955064e-53 | 7.723767e-50 |
MsG0580027999.01 | MsG0580028634.01 | 0.800616 | 1.325831e-48 | 6.201350e-46 |
MsG0580027999.01 | MsG0580029008.01 | 0.814707 | 1.343096e-51 | 9.077715e-49 |
MsG0580027999.01 | MsG0580029236.01 | 0.805479 | 1.308811e-49 | 6.931546e-47 |
MsG0580027999.01 | MsG0580029729.01 | 0.805237 | 1.470504e-49 | 7.739722e-47 |
MsG0580027999.01 | MsG0680030880.01 | 0.814553 | 1.452809e-51 | 9.778872e-49 |
MsG0580027999.01 | MsG0680030881.01 | 0.816078 | 6.657471e-52 | 4.671288e-49 |
MsG0580027999.01 | MsG0680030882.01 | 0.826007 | 3.434622e-54 | 3.181959e-51 |
MsG0580027999.01 | MsG0680031214.01 | 0.816642 | 4.978702e-52 | 3.547451e-49 |
MsG0580027999.01 | MsG0680031488.01 | 0.840310 | 9.392751e-58 | 1.332531e-54 |
MsG0580027999.01 | MsG0680031506.01 | 0.832591 | 8.660497e-56 | 9.724234e-53 |
MsG0580027999.01 | MsG0680031762.01 | 0.811790 | 5.869123e-51 | 3.666951e-48 |
MsG0580027999.01 | MsG0680034985.01 | 0.804766 | 1.845116e-49 | 9.594719e-47 |
MsG0580027999.01 | MsG0680035498.01 | 0.817147 | 3.833524e-52 | 2.769635e-49 |
MsG0580027999.01 | MsG0680035692.01 | 0.811219 | 7.812211e-51 | 4.807883e-48 |
MsG0580027999.01 | MsG0680035888.01 | 0.828967 | 6.697315e-55 | 6.759684e-52 |
MsG0580027999.01 | MsG0780036477.01 | 0.833931 | 4.014972e-56 | 4.693197e-53 |
MsG0580027999.01 | MsG0780036757.01 | 0.822267 | 2.594897e-53 | 2.161412e-50 |
MsG0580027999.01 | MsG0780036964.01 | 0.800036 | 1.740249e-48 | 8.020602e-46 |
MsG0580027999.01 | MsG0780037054.01 | 0.811121 | 8.202498e-51 | 5.035101e-48 |
MsG0580027999.01 | MsG0780037093.01 | 0.824840 | 6.488830e-54 | 5.814812e-51 |
MsG0580027999.01 | MsG0780038401.01 | 0.837954 | 3.831917e-57 | 5.057599e-54 |
MsG0580027999.01 | MsG0780038439.01 | 0.824013 | 1.016064e-53 | 8.891257e-51 |
MsG0580027999.01 | MsG0780038603.01 | 0.804200 | 2.421841e-49 | 1.241055e-46 |
MsG0580027999.01 | MsG0780039243.01 | 0.810003 | 1.430482e-50 | 8.525427e-48 |
MsG0580027999.01 | MsG0780039443.01 | 0.832199 | 1.083459e-55 | 1.202383e-52 |
MsG0580027999.01 | MsG0780039522.01 | 0.800405 | 1.463685e-48 | 6.809704e-46 |
MsG0580027999.01 | MsG0780040057.01 | 0.838667 | 2.509771e-57 | 3.385159e-54 |
MsG0580027999.01 | MsG0780040704.01 | 0.800738 | 1.251769e-48 | 5.873127e-46 |
MsG0580027999.01 | MsG0780040734.01 | 0.817235 | 3.662605e-52 | 2.652518e-49 |
MsG0580027999.01 | MsG0780040926.01 | 0.827505 | 1.507477e-54 | 1.458167e-51 |
MsG0580027999.01 | MsG0780041258.01 | 0.802787 | 4.753246e-49 | 2.349270e-46 |
MsG0580027999.01 | MsG0780041435.01 | 0.822331 | 2.507984e-53 | 2.092878e-50 |
MsG0580027999.01 | MsG0880042128.01 | 0.807641 | 4.576156e-50 | 2.562284e-47 |
MsG0580027999.01 | MsG0880042129.01 | 0.800170 | 1.634400e-48 | 7.558404e-46 |
MsG0580027999.01 | MsG0880042348.01 | 0.810456 | 1.142403e-50 | 6.889307e-48 |
MsG0580027999.01 | MsG0880042966.01 | 0.813494 | 2.488108e-51 | 1.627398e-48 |
MsG0580027999.01 | MsG0880043034.01 | 0.807218 | 5.626831e-50 | 3.116234e-47 |
MsG0580027999.01 | MsG0880043479.01 | 0.847495 | 1.115475e-59 | 1.986366e-56 |
MsG0580027999.01 | MsG0880043480.01 | 0.831408 | 1.698118e-55 | 1.841031e-52 |
MsG0580027999.01 | MsG0880043491.01 | 0.804528 | 2.068408e-49 | 1.068915e-46 |
MsG0580027999.01 | MsG0880043748.01 | 0.813743 | 2.193250e-51 | 1.444148e-48 |
MsG0580027999.01 | MsG0880044174.01 | 0.805297 | 1.428825e-49 | 7.531921e-47 |
MsG0580027999.01 | MsG0880044565.01 | 0.844880 | 5.747873e-59 | 9.408966e-56 |
MsG0580027999.01 | MsG0880044782.01 | 0.814736 | 1.323860e-51 | 8.954654e-49 |
MsG0580027999.01 | MsG0880045294.01 | 0.841906 | 3.575511e-58 | 5.330971e-55 |
MsG0580027999.01 | MsG0880045362.01 | 0.815659 | 8.255852e-52 | 5.726758e-49 |
MsG0580027999.01 | MsG0880045372.01 | 0.808041 | 3.762313e-50 | 2.128815e-47 |
MsG0580027999.01 | MsG0880045506.01 | 0.818322 | 2.082010e-52 | 1.553486e-49 |
MsG0580027999.01 | MsG0880045765.01 | 0.820341 | 7.218802e-53 | 5.696559e-50 |
MsG0580027999.01 | MsG0880046122.01 | 0.819558 | 1.090637e-52 | 8.420947e-50 |
MsG0580027999.01 | MsG0880046620.01 | 0.814070 | 1.857797e-51 | 1.234210e-48 |
MsG0580027999.01 | MsG0880047472.01 | 0.805086 | 1.581686e-49 | 8.292705e-47 |
MsG0580027999.01 | MsG0880047473.01 | 0.816616 | 5.045642e-52 | 3.592662e-49 |
MsG0280006491.01 | MsG0580027999.01 | 0.820856 | 5.498024e-53 | 4.401389e-50 |
MsG0280006712.01 | MsG0580027999.01 | 0.803206 | 3.893581e-49 | 1.944979e-46 |
MsG0280006993.01 | MsG0580027999.01 | 0.820013 | 8.584837e-53 | 6.713456e-50 |
MsG0280007164.01 | MsG0580027999.01 | 0.803690 | 3.090390e-49 | 1.563104e-46 |
MsG0280007224.01 | MsG0580027999.01 | -0.801354 | 9.369539e-49 | 4.465095e-46 |
MsG0280007452.01 | MsG0580027999.01 | 0.835833 | 1.333006e-56 | 1.649450e-53 |
MsG0280007501.01 | MsG0580027999.01 | 0.834394 | 3.073642e-56 | 3.642869e-53 |
MsG0280007527.01 | MsG0580027999.01 | 0.827042 | 1.946730e-54 | 1.857693e-51 |
MsG0280007547.01 | MsG0580027999.01 | 0.838535 | 2.714533e-57 | 3.646552e-54 |
MsG0280007763.01 | MsG0580027999.01 | 0.803408 | 3.535828e-49 | 1.775451e-46 |
MsG0280007955.01 | MsG0580027999.01 | 0.815791 | 7.715657e-52 | 5.371536e-49 |
MsG0280009748.01 | MsG0580027999.01 | 0.811699 | 6.144242e-51 | 3.829438e-48 |
MsG0280009794.01 | MsG0580027999.01 | 0.815833 | 7.547608e-52 | 5.260199e-49 |
MsG0280010184.01 | MsG0580027999.01 | 0.809390 | 1.938003e-50 | 1.136420e-47 |
MsG0280010366.01 | MsG0580027999.01 | 0.816568 | 5.170322e-52 | 3.676667e-49 |
MsG0280010411.01 | MsG0580027999.01 | 0.802504 | 5.435879e-49 | 2.667260e-46 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0080049043.01 | MsG0580027999.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027999.01.T01 | MTR_5g055150 | 99.115 | 226 | 2 | 0 | 1 | 226 | 1 | 226 | 3.84e-164 | 452 |
MsG0580027999.01.T01 | MTR_5g055150 | 98.485 | 132 | 2 | 0 | 1 | 132 | 1 | 132 | 5.28e-88 | 258 |
MsG0580027999.01.T01 | MTR_5g055130 | 56.075 | 107 | 12 | 3 | 3 | 107 | 17 | 90 | 7.10e-21 | 90.5 |
MsG0580027999.01.T01 | MTR_5g055130 | 56.075 | 107 | 12 | 3 | 3 | 107 | 17 | 90 | 7.14e-21 | 90.5 |
MsG0580027999.01.T01 | MTR_4g007850 | 51.429 | 105 | 14 | 3 | 3 | 107 | 17 | 84 | 3.24e-17 | 80.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580027999.01.T01 | AT1G13330 | 75.664 | 226 | 55 | 0 | 1 | 226 | 1 | 226 | 1.91e-125 | 354 |
Find 76 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAGGATCCCAAAGAATTTA+AGG | 0.146216 | 5:+72752680 | MsG0580027999.01.T01:CDS |
CCTTCAGCGTTATCGGATTT+TGG | 0.169276 | 5:-72749854 | None:intergenic |
AGGCGGAAAGATTTCGTTTA+AGG | 0.170664 | 5:+72750213 | MsG0580027999.01.T01:CDS |
AAAAGAAACCTTAAATTCTT+TGG | 0.192821 | 5:-72752688 | None:intergenic |
AAAGAATGTTCAGGGATTTA+TGG | 0.204783 | 5:+72752634 | MsG0580027999.01.T01:CDS |
AAGATTTCGTTTAAGGAGTA+TGG | 0.259007 | 5:+72750220 | MsG0580027999.01.T01:CDS |
TGTGATTTGGGTAGCAAAAT+AGG | 0.266860 | 5:+72750101 | MsG0580027999.01.T01:intron |
TGATTAAGCTCTTCGTTATT+CGG | 0.289927 | 5:-72750286 | None:intergenic |
GAGGAACAGAAGAAGGTTAT+TGG | 0.293325 | 5:+72750346 | MsG0580027999.01.T01:CDS |
TCAACTGCCACGCGTTCTTC+TGG | 0.310781 | 5:-72752570 | None:intergenic |
GCTTCTTACCCTGTGGTATC+AGG | 0.318511 | 5:-72752847 | None:intergenic |
AAAGAAACCTTAAATTCTTT+GGG | 0.320146 | 5:-72752687 | None:intergenic |
ACACAGGTATATAGATTATA+TGG | 0.323686 | 5:+72752929 | MsG0580027999.01.T01:three_prime_UTR |
AAGAGTACCTTCAGCGTTAT+CGG | 0.324816 | 5:-72749861 | None:intergenic |
AAGAATGTTCAGGGATTTAT+GGG | 0.335669 | 5:+72752635 | MsG0580027999.01.T01:CDS |
AGTTGAGAATGGAAGAAAAT+TGG | 0.354435 | 5:-72749825 | None:intergenic |
TTAAATTCTTTGGGATCCTT+AGG | 0.363696 | 5:-72752678 | None:intergenic |
TCTGCTTCAGGTTCAAGAAC+TGG | 0.380712 | 5:+72752503 | MsG0580027999.01.T01:intron |
GCATTGGATAGTCTTGAAAA+AGG | 0.384710 | 5:+72750193 | MsG0580027999.01.T01:CDS |
CTGTTCCTTTGTTTCTCAGA+AGG | 0.388643 | 5:-72749776 | None:intergenic |
GGAAGCGTAAAAGAATGTTC+AGG | 0.398097 | 5:+72752625 | MsG0580027999.01.T01:CDS |
TATTATTGTTTATATCTCTC+TGG | 0.409647 | 5:+72753089 | MsG0580027999.01.T01:three_prime_UTR |
CATTATTTACCTGCATTCTC+AGG | 0.432067 | 5:-72752391 | None:intergenic |
GAACATTGCAGGAGGAGCTT+GGG | 0.444399 | 5:+72752777 | MsG0580027999.01.T01:intron |
CGGTCGAAATGCCATTTGAT+TGG | 0.447375 | 5:+72753139 | MsG0580027999.01.T01:three_prime_UTR |
ATATACCTGTGTCATAGATT+AGG | 0.450639 | 5:-72752918 | None:intergenic |
TGAACATTGCAGGAGGAGCT+TGG | 0.451875 | 5:+72752776 | MsG0580027999.01.T01:intron |
TAAATATATCATTGTCCCCT+TGG | 0.461490 | 5:-72752872 | None:intergenic |
GTTATTGGTGAGGTTGAAGC+AGG | 0.462602 | 5:+72750361 | MsG0580027999.01.T01:CDS |
TTTGGAGCCATAGTTGAGAA+TGG | 0.473128 | 5:-72749836 | None:intergenic |
CGGGTCAAACGCCAATCAAA+TGG | 0.476571 | 5:-72753150 | None:intergenic |
CACAGGGTAAGAAGCGGCCA+AGG | 0.494504 | 5:+72752855 | MsG0580027999.01.T01:CDS |
GCAACTTGAGGAACAGAAGA+AGG | 0.515976 | 5:+72750339 | MsG0580027999.01.T01:CDS |
CGAAGAGCTTAATCAGATGA+AGG | 0.516162 | 5:+72750294 | MsG0580027999.01.T01:CDS |
GGCAGTTGAGAGTATGTTGT+CGG | 0.518602 | 5:+72752584 | MsG0580027999.01.T01:CDS |
TGTAAAGACTTACATTACAT+TGG | 0.522428 | 5:-72752991 | None:intergenic |
TCCTTCCTAATCTATGACAC+AGG | 0.528339 | 5:+72752913 | MsG0580027999.01.T01:three_prime_UTR |
GTTACGTGGAGGTGTTACTT+TGG | 0.529557 | 5:+72752542 | MsG0580027999.01.T01:CDS |
AACTCACCAGGGCATGGTCT+CGG | 0.530338 | 5:+72753061 | MsG0580027999.01.T01:three_prime_UTR |
ATTCACCTTCTGAGAAACAA+AGG | 0.559522 | 5:+72749771 | None:intergenic |
AGAAGTTGACCTGAGAATGC+AGG | 0.568107 | 5:+72752382 | MsG0580027999.01.T01:CDS |
ACAGAAGAAGGTTATTGGTG+AGG | 0.575228 | 5:+72750351 | MsG0580027999.01.T01:CDS |
AGCGGCGATACAGAAAGCAT+TGG | 0.576611 | 5:+72750177 | MsG0580027999.01.T01:CDS |
GTGGAGGTGTTACTTTGGTG+AGG | 0.581557 | 5:+72752547 | MsG0580027999.01.T01:CDS |
CTAGAATATGATGAAGATGT+TGG | 0.582142 | 5:+72752800 | MsG0580027999.01.T01:CDS |
GAAGCGTAAAAGAATGTTCA+GGG | 0.583026 | 5:+72752626 | MsG0580027999.01.T01:CDS |
TGAGAATGGAAGAAAATTGG+CGG | 0.583321 | 5:-72749822 | None:intergenic |
ATGCAGTGACCTGATACCAC+AGG | 0.591833 | 5:+72752838 | MsG0580027999.01.T01:CDS |
GTTGCAATCAAATTTAACAA+TGG | 0.597161 | 5:+72752343 | MsG0580027999.01.T01:CDS |
CCTCACTGAGAACTCACCTA+AGG | 0.600047 | 5:+72752662 | MsG0580027999.01.T01:CDS |
CCAAAATCCGATAACGCTGA+AGG | 0.602208 | 5:+72749854 | MsG0580027999.01.T01:CDS |
GAGAATGGAAGAAAATTGGC+GGG | 0.603178 | 5:-72749821 | None:intergenic |
AAGACTAACTCACCAGGGCA+TGG | 0.605848 | 5:+72753055 | MsG0580027999.01.T01:three_prime_UTR |
AAAGTTTAATCTGAAGAAAG+CGG | 0.612912 | 5:+72750159 | MsG0580027999.01.T01:CDS |
ACAGGGTAAGAAGCGGCCAA+GGG | 0.615308 | 5:+72752856 | MsG0580027999.01.T01:CDS |
ACCTGTGTCATAGATTAGGA+AGG | 0.624076 | 5:-72752914 | None:intergenic |
ATGATATATTTATCGAAACT+CGG | 0.624773 | 5:+72752883 | MsG0580027999.01.T01:exon |
GCCGCTGAATACGCAAAATG+TGG | 0.625677 | 5:+72750123 | MsG0580027999.01.T01:CDS |
CTTAGGTGAGTTCTCAGTGA+GGG | 0.632171 | 5:-72752661 | None:intergenic |
CTTGGCCGCTTCTTACCCTG+TGG | 0.641684 | 5:-72752854 | None:intergenic |
CAGGGTAAGAAGCGGCCAAG+GGG | 0.643585 | 5:+72752857 | MsG0580027999.01.T01:CDS |
TAATTTGCAGAAGCAACTTG+AGG | 0.648057 | 5:+72750327 | MsG0580027999.01.T01:CDS |
CGTGTTGAACTTCGTCAACG+AGG | 0.649248 | 5:+72749967 | MsG0580027999.01.T01:CDS |
TGAGTTAGTCTTGTAAAAGA+CGG | 0.653805 | 5:-72753044 | None:intergenic |
CGGAGAAAATAAGTCAGTGG+AGG | 0.655882 | 5:+72752604 | MsG0580027999.01.T01:CDS |
ATTGCACCGAGACCATGCCC+TGG | 0.665357 | 5:-72753067 | None:intergenic |
TGATACCACAGGGTAAGAAG+CGG | 0.675121 | 5:+72752849 | MsG0580027999.01.T01:CDS |
GCTGAATACGCAAAATGTGG+CGG | 0.678440 | 5:+72750126 | MsG0580027999.01.T01:CDS |
GGTGAGGCCAGAAGAACGCG+TGG | 0.679059 | 5:+72752563 | MsG0580027999.01.T01:CDS |
GTTAGTCTTGTAAAAGACGG+TGG | 0.681280 | 5:-72753041 | None:intergenic |
TGTCGGAGAAAATAAGTCAG+TGG | 0.683795 | 5:+72752601 | MsG0580027999.01.T01:CDS |
TTTACAAGACTAACTCACCA+GGG | 0.693666 | 5:+72753050 | MsG0580027999.01.T01:three_prime_UTR |
ATCAAGTTGAACAAGTTACG+TGG | 0.698323 | 5:+72752528 | MsG0580027999.01.T01:CDS |
TGCAGTGACCTGATACCACA+GGG | 0.698743 | 5:+72752839 | MsG0580027999.01.T01:CDS |
AAGTTGAACAAGTTACGTGG+AGG | 0.731034 | 5:+72752531 | MsG0580027999.01.T01:CDS |
CCTTAGGTGAGTTCTCAGTG+AGG | 0.748594 | 5:-72752662 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTATGTATATTTTTACAA+TGG | - | Chr5:72751969-72751988 | None:intergenic | 10.0% |
!! | AATTATATTAGTAGTAATAG+TGG | - | Chr5:72752757-72752776 | None:intergenic | 15.0% |
!! | ATTATATTAGTAGTAATAGT+GGG | - | Chr5:72752756-72752775 | None:intergenic | 15.0% |
!! | TTAAATCACTAAAATTGAAA+TGG | - | Chr5:72751304-72751323 | None:intergenic | 15.0% |
!!! | AATTTTAGTGATTTAAAAAG+AGG | + | Chr5:72751308-72751327 | MsG0580027999.01.T01:intron | 15.0% |
!!! | ATATTAATTACAGTGTTTTA+AGG | - | Chr5:72750888-72750907 | None:intergenic | 15.0% |
!! | AAAAGAAACCTTAAATTCTT+TGG | - | Chr5:72752691-72752710 | None:intergenic | 20.0% |
!! | AAAGAAACCTTAAATTCTTT+GGG | - | Chr5:72752690-72752709 | None:intergenic | 20.0% |
!! | AATCAGATAAAACAATGAAA+TGG | - | Chr5:72752188-72752207 | None:intergenic | 20.0% |
!! | AATGTTGTTCAATTAAGATA+TGG | + | Chr5:72752464-72752483 | MsG0580027999.01.T01:intron | 20.0% |
!! | AATTGATGAATGTAACTTAT+TGG | + | Chr5:72752305-72752324 | MsG0580027999.01.T01:intron | 20.0% |
!! | ATGATATATTTATCGAAACT+CGG | + | Chr5:72752883-72752902 | MsG0580027999.01.T01:exon | 20.0% |
!! | TATTATTGTTTATATCTCTC+TGG | + | Chr5:72753089-72753108 | MsG0580027999.01.T01:three_prime_UTR | 20.0% |
!! | TTTCAATTAATGAAAAGAGA+CGG | + | Chr5:72751902-72751921 | MsG0580027999.01.T01:intron | 20.0% |
!!! | ATTGTTTTGTTTTTGTGATT+TGG | + | Chr5:72750088-72750107 | MsG0580027999.01.T01:intron | 20.0% |
!!! | TCAATTAGTTTCTATTGATT+TGG | + | Chr5:72750020-72750039 | MsG0580027999.01.T01:intron | 20.0% |
!!! | TGTTTTAAAATGAAATGAAC+AGG | + | Chr5:72751374-72751393 | MsG0580027999.01.T01:intron | 20.0% |
!!! | TTATTTGAGTGTTTTGATTT+GGG | + | Chr5:72750454-72750473 | MsG0580027999.01.T01:intron | 20.0% |
!!! | TTGTTTTGTTTTTGTGATTT+GGG | + | Chr5:72750089-72750108 | MsG0580027999.01.T01:intron | 20.0% |
!!! | TTTAAAAGATGTTTAAGTTG+TGG | + | Chr5:72751575-72751594 | MsG0580027999.01.T01:intron | 20.0% |
! | AAACAAAGGAACAGAAAAAA+AGG | + | Chr5:72749785-72749804 | MsG0580027999.01.T01:five_prime_UTR | 25.0% |
! | AAAGTTTAATCTGAAGAAAG+CGG | + | Chr5:72750159-72750178 | MsG0580027999.01.T01:CDS | 25.0% |
! | AACAAAGGAACAGAAAAAAA+GGG | + | Chr5:72749786-72749805 | MsG0580027999.01.T01:five_prime_UTR | 25.0% |
! | ACACAGGTATATAGATTATA+TGG | + | Chr5:72752929-72752948 | MsG0580027999.01.T01:three_prime_UTR | 25.0% |
! | AGTTAAAGAGAGAAAATGTT+AGG | - | Chr5:72749934-72749953 | None:intergenic | 25.0% |
! | ATTTCGAATAACAATCTAGT+TGG | + | Chr5:72752229-72752248 | MsG0580027999.01.T01:intron | 25.0% |
! | CTAATATAATTGAACATTGC+AGG | + | Chr5:72752766-72752785 | MsG0580027999.01.T01:intron | 25.0% |
! | GTTGCAATCAAATTTAACAA+TGG | + | Chr5:72752343-72752362 | MsG0580027999.01.T01:CDS | 25.0% |
! | TATGAAATGAAACGAAGAAA+TGG | - | Chr5:72749909-72749928 | None:intergenic | 25.0% |
! | TGGTATTTATACTGTGTTTA+TGG | + | Chr5:72750040-72750059 | MsG0580027999.01.T01:intron | 25.0% |
! | TGTAAAGACTTACATTACAT+TGG | - | Chr5:72752994-72753013 | None:intergenic | 25.0% |
! | TTTCTTTGCTGAAAATGTAT+TGG | + | Chr5:72752077-72752096 | MsG0580027999.01.T01:intron | 25.0% |
! | TTTGGAAATGTAGTTGAATT+GGG | + | Chr5:72750399-72750418 | MsG0580027999.01.T01:intron | 25.0% |
!! | AGGTATGATTTAAAATGGTT+TGG | + | Chr5:72750381-72750400 | MsG0580027999.01.T01:intron | 25.0% |
!! | TACAATTTAGACTCAGTTTT+CGG | + | Chr5:72753010-72753029 | MsG0580027999.01.T01:three_prime_UTR | 25.0% |
!!! | ATTTAAGGTTTCTTTTTGTC+CGG | + | Chr5:72752695-72752714 | MsG0580027999.01.T01:intron | 25.0% |
!!! | GTGTTTTAAAACCTAAATGA+TGG | + | Chr5:72751224-72751243 | MsG0580027999.01.T01:intron | 25.0% |
!!! | GTTATTTGAGTGTTTTGATT+TGG | + | Chr5:72750453-72750472 | MsG0580027999.01.T01:intron | 25.0% |
!!! | GTTTTAAAACGTAAATGATC+AGG | + | Chr5:72750672-72750691 | MsG0580027999.01.T01:intron | 25.0% |
!!! | GTTTTTTTTCTCAATTTGAG+CGG | + | Chr5:72750763-72750782 | MsG0580027999.01.T01:intron | 25.0% |
!!! | TATTTTAATCCGCTCAAATT+GGG | - | Chr5:72751753-72751772 | None:intergenic | 25.0% |
!!! | TCCTGTTCATTTAGTTTTTA+AGG | - | Chr5:72750534-72750553 | None:intergenic | 25.0% |
!!! | TCTTTTAAAACCGCTTAAAT+CGG | - | Chr5:72751608-72751627 | None:intergenic | 25.0% |
!!! | TTATTTTAATCCGCTCAAAT+TGG | - | Chr5:72751754-72751773 | None:intergenic | 25.0% |
!!! | TTTAAAAGAGGTTTAAGTTG+TGG | + | Chr5:72750787-72750806 | MsG0580027999.01.T01:intron | 25.0% |
AAAGAATGTTCAGGGATTTA+TGG | + | Chr5:72752634-72752653 | MsG0580027999.01.T01:CDS | 30.0% | |
AAAGTAATTCAATCATGACC+TGG | + | Chr5:72750631-72750650 | MsG0580027999.01.T01:intron | 30.0% | |
AAGAATGTTCAGGGATTTAT+GGG | + | Chr5:72752635-72752654 | MsG0580027999.01.T01:CDS | 30.0% | |
AAGATTTCGTTTAAGGAGTA+TGG | + | Chr5:72750220-72750239 | MsG0580027999.01.T01:CDS | 30.0% | |
AGTTGAGAATGGAAGAAAAT+TGG | - | Chr5:72749828-72749847 | None:intergenic | 30.0% | |
ATATAATTGAACATTGCAGG+AGG | + | Chr5:72752769-72752788 | MsG0580027999.01.T01:intron | 30.0% | |
ATATACCTGTGTCATAGATT+AGG | - | Chr5:72752921-72752940 | None:intergenic | 30.0% | |
ATTAATGAAAAGAGACGGAA+CGG | + | Chr5:72751907-72751926 | MsG0580027999.01.T01:intron | 30.0% | |
ATTCCAGTTAATGTTGAAAC+TGG | + | Chr5:72752254-72752273 | MsG0580027999.01.T01:intron | 30.0% | |
CATCTATAAAATTCTGCTTC+AGG | + | Chr5:72752491-72752510 | MsG0580027999.01.T01:intron | 30.0% | |
CTAGAATATGATGAAGATGT+TGG | + | Chr5:72752800-72752819 | MsG0580027999.01.T01:CDS | 30.0% | |
CTATAGTTTGGTTATTTGAG+TGG | + | Chr5:72751432-72751451 | MsG0580027999.01.T01:intron | 30.0% | |
GAAGCAGGTATGATTTAAAA+TGG | + | Chr5:72750376-72750395 | MsG0580027999.01.T01:intron | 30.0% | |
GATGATTCAATTGATTGAAC+TGG | + | Chr5:72750694-72750713 | MsG0580027999.01.T01:intron | 30.0% | |
GCCTTAAAAACTAAATGAAC+AGG | + | Chr5:72750530-72750549 | MsG0580027999.01.T01:intron | 30.0% | |
GTTTGGAAATGTAGTTGAAT+TGG | + | Chr5:72750398-72750417 | MsG0580027999.01.T01:intron | 30.0% | |
TAAATATATCATTGTCCCCT+TGG | - | Chr5:72752875-72752894 | None:intergenic | 30.0% | |
TAAGGATCCCAAAGAATTTA+AGG | + | Chr5:72752680-72752699 | MsG0580027999.01.T01:CDS | 30.0% | |
TCAAATCCTCTCAAATTTGA+CGG | - | Chr5:72752128-72752147 | None:intergenic | 30.0% | |
TCAGCAAAGAAAAATATCAG+TGG | - | Chr5:72752069-72752088 | None:intergenic | 30.0% | |
TCCCTTTCAACAATGTAAAA+AGG | - | Chr5:72752431-72752450 | None:intergenic | 30.0% | |
TGATTAAGCTCTTCGTTATT+CGG | - | Chr5:72750289-72750308 | None:intergenic | 30.0% | |
TTAATTGATTGAACTCGATG+CGG | + | Chr5:72750426-72750445 | MsG0580027999.01.T01:intron | 30.0% | |
TTATTTGAGTAGCTTAACTG+TGG | + | Chr5:72751139-72751158 | MsG0580027999.01.T01:intron | 30.0% | |
TTATTTGAGTGGTTTAGTTG+TGG | + | Chr5:72750741-72750760 | MsG0580027999.01.T01:intron | 30.0% | |
TTCAATCAATTGAATCATCC+AGG | - | Chr5:72750693-72750712 | None:intergenic | 30.0% | |
TTGAAAGGGAATTAGTGATT+TGG | + | Chr5:72752441-72752460 | MsG0580027999.01.T01:intron | 30.0% | |
TTGCTGAAAATGTATTGGAA+CGG | + | Chr5:72752082-72752101 | MsG0580027999.01.T01:intron | 30.0% | |
! | AAAAGAACTATGATAGTGAC+CGG | - | Chr5:72752717-72752736 | None:intergenic | 30.0% |
! | ACAATTTAGACTCAGTTTTC+GGG | + | Chr5:72753011-72753030 | MsG0580027999.01.T01:three_prime_UTR | 30.0% |
! | CTTTAAAAACCGCTCAAATT+GGG | - | Chr5:72750819-72750838 | None:intergenic | 30.0% |
! | GCCTTTTTACATTGTTGAAA+GGG | + | Chr5:72752427-72752446 | MsG0580027999.01.T01:intron | 30.0% |
! | TACGGAGTATTTCTCAAATT+AGG | + | Chr5:72751940-72751959 | MsG0580027999.01.T01:intron | 30.0% |
! | TCTTTAAAAACCGCTCAAAT+TGG | - | Chr5:72750820-72750839 | None:intergenic | 30.0% |
! | TGCCTTTTTACATTGTTGAA+AGG | + | Chr5:72752426-72752445 | MsG0580027999.01.T01:intron | 30.0% |
! | TTTTCTTCCATTCTCAACTA+TGG | + | Chr5:72749829-72749848 | MsG0580027999.01.T01:exon | 30.0% |
!! | AATTTGAGCGGTTTTTAAAG+AGG | + | Chr5:72750819-72750838 | MsG0580027999.01.T01:intron | 30.0% |
!! | TGAGTTAGTCTTGTAAAAGA+CGG | - | Chr5:72753047-72753066 | None:intergenic | 30.0% |
!! | TTAAATTCTTTGGGATCCTT+AGG | - | Chr5:72752681-72752700 | None:intergenic | 30.0% |
!!! | AATTTGAGCGGTTTTAAAAG+AGG | + | Chr5:72750775-72750794 | MsG0580027999.01.T01:intron | 30.0% |
!!! | CAGTGTTTTAAAGACTAAAC+AGG | - | Chr5:72751812-72751831 | None:intergenic | 30.0% |
!!! | CTTTTAAAACCGCTTAAATC+GGG | - | Chr5:72751607-72751626 | None:intergenic | 30.0% |
!!! | GATTTAAGCGGTTTTAAAAG+AGG | + | Chr5:72751607-72751626 | MsG0580027999.01.T01:intron | 30.0% |
!!! | TCTTTTAAAACCGCTCAAAT+CGG | - | Chr5:72750776-72750795 | None:intergenic | 30.0% |
!!! | TGTTTTAATCCGCTCAAATT+GGG | - | Chr5:72750965-72750984 | None:intergenic | 30.0% |
!!! | TTATTTTAGCGTTTTGATCG+CGG | + | Chr5:72750585-72750604 | MsG0580027999.01.T01:intron | 30.0% |
!!! | TTGTTTTAATCCGCTCAAAT+TGG | - | Chr5:72750966-72750985 | None:intergenic | 30.0% |
!!! | TTTTGATTTGGGTTTGTTTC+TGG | + | Chr5:72750465-72750484 | MsG0580027999.01.T01:intron | 30.0% |
AAAAAACCGACAAAACCTCT+TGG | - | Chr5:72751000-72751019 | None:intergenic | 35.0% | |
AAAGCAGTTGAATCATGACA+TGG | + | Chr5:72751334-72751353 | MsG0580027999.01.T01:intron | 35.0% | |
AACCAAGCTATAGATAGTAC+TGG | - | Chr5:72750723-72750742 | None:intergenic | 35.0% | |
AACCAGTACTATCTATAGCT+TGG | + | Chr5:72750718-72750737 | MsG0580027999.01.T01:intron | 35.0% | |
AACGGGTACTATCTATAGTT+TGG | + | Chr5:72751420-72751439 | MsG0580027999.01.T01:intron | 35.0% | |
AACTGGTACTATCTACAGTT+CGG | + | Chr5:72751116-72751135 | MsG0580027999.01.T01:intron | 35.0% | |
AAGACTAAACAGGCATCAAA+CGG | - | Chr5:72751802-72751821 | None:intergenic | 35.0% | |
AAGCAGTTGAATCATGACAT+GGG | + | Chr5:72751335-72751354 | MsG0580027999.01.T01:intron | 35.0% | |
AAGTAACCGTCAAATTTGAG+AGG | + | Chr5:72752119-72752138 | MsG0580027999.01.T01:intron | 35.0% | |
AGTTAATGTTGAAACTGGTG+AGG | + | Chr5:72752259-72752278 | MsG0580027999.01.T01:intron | 35.0% | |
CAATTGATTGAACTCTGAAC+TGG | + | Chr5:72751872-72751891 | MsG0580027999.01.T01:intron | 35.0% | |
CATTATTTACCTGCATTCTC+AGG | - | Chr5:72752394-72752413 | None:intergenic | 35.0% | |
CTATAGCTTGGTTATTTGAG+TGG | + | Chr5:72750730-72750749 | MsG0580027999.01.T01:intron | 35.0% | |
CTCTGGTGAAAATCTCAATA+TGG | - | Chr5:72751848-72751867 | None:intergenic | 35.0% | |
GAAGCGTAAAAGAATGTTCA+GGG | + | Chr5:72752626-72752645 | MsG0580027999.01.T01:CDS | 35.0% | |
GAGAATGCAGGTAAATAATG+TGG | + | Chr5:72752394-72752413 | MsG0580027999.01.T01:intron | 35.0% | |
GTTCAATCAATTGAACACTC+TGG | - | Chr5:72751865-72751884 | None:intergenic | 35.0% | |
TAATTGTGACCTAGACATTC+TGG | + | Chr5:72750844-72750863 | MsG0580027999.01.T01:intron | 35.0% | |
TCAAGTGATTGAACTGTGAA+CGG | + | Chr5:72751402-72751421 | MsG0580027999.01.T01:intron | 35.0% | |
TCACCAGTTTCAACATTAAC+TGG | - | Chr5:72752260-72752279 | None:intergenic | 35.0% | |
TGAGAATGGAAGAAAATTGG+CGG | - | Chr5:72749825-72749844 | None:intergenic | 35.0% | |
TGATTTCATCCCAATTTGAG+CGG | + | Chr5:72750953-72750972 | MsG0580027999.01.T01:intron | 35.0% | |
TTTACAAGACTAACTCACCA+GGG | + | Chr5:72753050-72753069 | MsG0580027999.01.T01:three_prime_UTR | 35.0% | |
! | GCATTGGATAGTCTTGAAAA+AGG | + | Chr5:72750193-72750212 | MsG0580027999.01.T01:CDS | 35.0% |
! | TAAATGATGGAACTGTGAAC+CGG | + | Chr5:72751237-72751256 | MsG0580027999.01.T01:intron | 35.0% |
! | TAATTTGCAGAAGCAACTTG+AGG | + | Chr5:72750327-72750346 | MsG0580027999.01.T01:CDS | 35.0% |
! | TGCTTTAAACCGCTCAAATT+GGG | - | Chr5:72751171-72751190 | None:intergenic | 35.0% |
! | TGTGATTTGGGTAGCAAAAT+AGG | + | Chr5:72750101-72750120 | MsG0580027999.01.T01:intron | 35.0% |
! | TTGGATAGTCTTGAAAAAGG+CGG | + | Chr5:72750196-72750215 | MsG0580027999.01.T01:CDS | 35.0% |
! | TTTTACAAGACTAACTCACC+AGG | + | Chr5:72753049-72753068 | MsG0580027999.01.T01:three_prime_UTR | 35.0% |
!! | AGTTATTTGAGCGTTTTGAC+CGG | + | Chr5:72751029-72751048 | MsG0580027999.01.T01:intron | 35.0% |
!! | ATCAAGTTGAACAAGTTACG+TGG | + | Chr5:72752528-72752547 | MsG0580027999.01.T01:CDS | 35.0% |
!!! | CTTTTAAAACCGCTCAAATC+AGG | - | Chr5:72751475-72751494 | None:intergenic | 35.0% |
!!! | CTTTTAAAACCGCTCAAATC+GGG | - | Chr5:72751475-72751494 | None:intergenic | 35.0% |
!!! | GATTTGAGCGGTTTTAAAAG+AGG | + | Chr5:72751475-72751494 | MsG0580027999.01.T01:intron | 35.0% |
!!! | TAGGTTTTAAAACACCGAAC+TGG | - | Chr5:72751219-72751238 | None:intergenic | 35.0% |
AAAGCAGTTGAATCATGACC+TGG | + | Chr5:72751077-72751096 | MsG0580027999.01.T01:intron | 40.0% | |
AAATGGAGAGAGATGAGTGA+TGG | - | Chr5:72749892-72749911 | None:intergenic | 40.0% | |
AACCAAAGTGAAGATAGCAC+CGG | - | Chr5:72751259-72751278 | None:intergenic | 40.0% | |
AACGCTCAAATAACTGAACC+AGG | - | Chr5:72751024-72751043 | None:intergenic | 40.0% | |
AAGTTGAACAAGTTACGTGG+AGG | + | Chr5:72752531-72752550 | MsG0580027999.01.T01:CDS | 40.0% | |
ACAATTGAACCATCTCCAAG+AGG | + | Chr5:72750982-72751001 | MsG0580027999.01.T01:intron | 40.0% | |
ACAGAAGAAGGTTATTGGTG+AGG | + | Chr5:72750351-72750370 | MsG0580027999.01.T01:CDS | 40.0% | |
ACCTGTGTCATAGATTAGGA+AGG | - | Chr5:72752917-72752936 | None:intergenic | 40.0% | |
AGGCGGAAAGATTTCGTTTA+AGG | + | Chr5:72750213-72750232 | MsG0580027999.01.T01:CDS | 40.0% | |
ATCAAACGGACAAAACCACT+GGG | - | Chr5:72751788-72751807 | None:intergenic | 40.0% | |
ATCGAACTAGCAAATCATCC+AGG | - | Chr5:72750652-72750671 | None:intergenic | 40.0% | |
CAAGTGATTGAACTGTGAAC+GGG | + | Chr5:72751403-72751422 | MsG0580027999.01.T01:intron | 40.0% | |
CGAAGAGCTTAATCAGATGA+AGG | + | Chr5:72750294-72750313 | MsG0580027999.01.T01:CDS | 40.0% | |
CGATTTCATCCCAATTTGAG+CGG | + | Chr5:72751741-72751760 | MsG0580027999.01.T01:intron | 40.0% | |
CGGAACGGAATACAATGATA+CGG | + | Chr5:72751922-72751941 | MsG0580027999.01.T01:intron | 40.0% | |
GAGAATGGAAGAAAATTGGC+GGG | - | Chr5:72749824-72749843 | None:intergenic | 40.0% | |
GAGGAACAGAAGAAGGTTAT+TGG | + | Chr5:72750346-72750365 | MsG0580027999.01.T01:CDS | 40.0% | |
GGTTCACAGTTCCATCATTT+AGG | - | Chr5:72751238-72751257 | None:intergenic | 40.0% | |
TAACTGTGACCAAGAGGTTT+CGG | + | Chr5:72751632-72751651 | MsG0580027999.01.T01:intron | 40.0% | |
TACACCAAACCAGAATGTCT+AGG | - | Chr5:72750856-72750875 | None:intergenic | 40.0% | |
TCCTTCCTAATCTATGACAC+AGG | + | Chr5:72752913-72752932 | MsG0580027999.01.T01:three_prime_UTR | 40.0% | |
TGGATTTGTCCCAATTTGAG+CGG | + | Chr5:72750807-72750826 | MsG0580027999.01.T01:intron | 40.0% | |
TGTCGGAGAAAATAAGTCAG+TGG | + | Chr5:72752601-72752620 | MsG0580027999.01.T01:CDS | 40.0% | |
TTAAACCGCTCAAATTGGGA+CGG | - | Chr5:72751167-72751186 | None:intergenic | 40.0% | |
! | AAAGCAGTTGATTCATGACC+TGG | + | Chr5:72750500-72750519 | MsG0580027999.01.T01:intron | 40.0% |
! | CTGCTTTAAACCGCTCAAAT+TGG | - | Chr5:72751172-72751191 | None:intergenic | 40.0% |
! | GGAAGCGTAAAAGAATGTTC+AGG | + | Chr5:72752625-72752644 | MsG0580027999.01.T01:CDS | 40.0% |
! | TTTGGAGCCATAGTTGAGAA+TGG | - | Chr5:72749839-72749858 | None:intergenic | 40.0% |
!! | AAGAGTACCTTCAGCGTTAT+CGG | - | Chr5:72749864-72749883 | None:intergenic | 40.0% |
!! | AGACATTCTGGTTTGGTGTA+TGG | + | Chr5:72750856-72750875 | MsG0580027999.01.T01:intron | 40.0% |
!! | GTTAGTCTTGTAAAAGACGG+TGG | - | Chr5:72753044-72753063 | None:intergenic | 40.0% |
!! | GTTATTTGAGCGTTTTGACC+GGG | + | Chr5:72751030-72751049 | MsG0580027999.01.T01:intron | 40.0% |
!! | TGGGTTTGTTTCTGGTTTGA+GGG | + | Chr5:72750473-72750492 | MsG0580027999.01.T01:intron | 40.0% |
!! | TTATTTGAGCGTTTTGACCG+GGG | + | Chr5:72751031-72751050 | MsG0580027999.01.T01:intron | 40.0% |
!! | TTGGGTTTGTTTCTGGTTTG+AGG | + | Chr5:72750472-72750491 | MsG0580027999.01.T01:intron | 40.0% |
!! | TTTTGACCGGGGTTTGTTTA+GGG | + | Chr5:72751042-72751061 | MsG0580027999.01.T01:intron | 40.0% |
!! | TTTTGATCGCGGTTTGTTTC+TGG | + | Chr5:72750596-72750615 | MsG0580027999.01.T01:intron | 40.0% |
!!! | GTTTTTAAGGCGAATCATCC+AGG | - | Chr5:72750521-72750540 | None:intergenic | 40.0% |
!!! | TGGTTTTGTCCCGATTTAAG+CGG | + | Chr5:72751595-72751614 | MsG0580027999.01.T01:intron | 40.0% |
!!! | TGGTTTTGTCCTGATTTGAG+CGG | + | Chr5:72751507-72751526 | MsG0580027999.01.T01:intron | 40.0% |
ACCTGAATGATTCGCCAGTT+CGG | + | Chr5:72751202-72751221 | MsG0580027999.01.T01:intron | 45.0% | |
AGAAGTTGACCTGAGAATGC+AGG | + | Chr5:72752382-72752401 | MsG0580027999.01.T01:CDS | 45.0% | |
ATAATTGAGCCATCACCCAG+TGG | + | Chr5:72751770-72751789 | MsG0580027999.01.T01:intron | 45.0% | |
CATCAAACGGACAAAACCAC+TGG | - | Chr5:72751789-72751808 | None:intergenic | 45.0% | |
CCAAAATCCGATAACGCTGA+AGG | + | Chr5:72749854-72749873 | MsG0580027999.01.T01:CDS | 45.0% | |
CGGAGAAAATAAGTCAGTGG+AGG | + | Chr5:72752604-72752623 | MsG0580027999.01.T01:CDS | 45.0% | |
CTTAGGTGAGTTCTCAGTGA+GGG | - | Chr5:72752664-72752683 | None:intergenic | 45.0% | |
GAGGTTTAACTGTGACCAAG+AGG | + | Chr5:72751626-72751645 | MsG0580027999.01.T01:intron | 45.0% | |
GCAACTTGAGGAACAGAAGA+AGG | + | Chr5:72750339-72750358 | MsG0580027999.01.T01:CDS | 45.0% | |
GCTGAATACGCAAAATGTGG+CGG | + | Chr5:72750126-72750145 | MsG0580027999.01.T01:CDS | 45.0% | |
GTTATTGGTGAGGTTGAAGC+AGG | + | Chr5:72750361-72750380 | MsG0580027999.01.T01:CDS | 45.0% | |
TACATCGAACCGAAACCTCT+TGG | - | Chr5:72751644-72751663 | None:intergenic | 45.0% | |
TGATACCACAGGGTAAGAAG+CGG | + | Chr5:72752849-72752868 | MsG0580027999.01.T01:CDS | 45.0% | |
TGATTGAACTCGATGCGGTT+TGG | + | Chr5:72750431-72750450 | MsG0580027999.01.T01:intron | 45.0% | |
TGTTGAAACTGGTGAGGACT+TGG | + | Chr5:72752265-72752284 | MsG0580027999.01.T01:intron | 45.0% | |
! | AGAGGTTTCGGTTCGATGTA+TGG | + | Chr5:72751644-72751663 | MsG0580027999.01.T01:intron | 45.0% |
! | CCTTCAGCGTTATCGGATTT+TGG | - | Chr5:72749857-72749876 | None:intergenic | 45.0% |
! | CGGTCGAAATGCCATTTGAT+TGG | + | Chr5:72753139-72753158 | MsG0580027999.01.T01:three_prime_UTR | 45.0% |
! | GCCACATTTTGCGTATTCAG+CGG | - | Chr5:72750127-72750146 | None:intergenic | 45.0% |
! | GGCAGTTGAGAGTATGTTGT+CGG | + | Chr5:72752584-72752603 | MsG0580027999.01.T01:CDS | 45.0% |
! | GTGACCTAGACATTCTGGTT+TGG | + | Chr5:72750849-72750868 | MsG0580027999.01.T01:intron | 45.0% |
! | TCTGCTTCAGGTTCAAGAAC+TGG | + | Chr5:72752503-72752522 | MsG0580027999.01.T01:intron | 45.0% |
!! | AACCGGTGCTATCTTCACTT+TGG | + | Chr5:72751254-72751273 | MsG0580027999.01.T01:intron | 45.0% |
!! | CCATCTCCAAGAGGTTTTGT+CGG | + | Chr5:72750991-72751010 | MsG0580027999.01.T01:intron | 45.0% |
!! | CGGTTTGTTTCTGGTTTGAG+GGG | + | Chr5:72750605-72750624 | MsG0580027999.01.T01:intron | 45.0% |
!! | GCGGTTTGTTTCTGGTTTGA+GGG | + | Chr5:72750604-72750623 | MsG0580027999.01.T01:intron | 45.0% |
!! | GGGTTTGTTTCTGGTTTGAG+GGG | + | Chr5:72750474-72750493 | MsG0580027999.01.T01:intron | 45.0% |
!! | GTTACGTGGAGGTGTTACTT+TGG | + | Chr5:72752542-72752561 | MsG0580027999.01.T01:CDS | 45.0% |
!! | GTTTTGACCGGGGTTTGTTT+AGG | + | Chr5:72751041-72751060 | MsG0580027999.01.T01:intron | 45.0% |
!!! | CTGTCGCGTCATTTTTCAGA+CGG | + | Chr5:72753119-72753138 | MsG0580027999.01.T01:three_prime_UTR | 45.0% |
!!! | GGTTTTGTCGGTTTTTTGCC+TGG | + | Chr5:72751003-72751022 | MsG0580027999.01.T01:intron | 45.0% |
!!! | TGGTTTTGTCCCGATTTGAG+CGG | + | Chr5:72751463-72751482 | MsG0580027999.01.T01:intron | 45.0% |
AAGACTAACTCACCAGGGCA+TGG | + | Chr5:72753055-72753074 | MsG0580027999.01.T01:three_prime_UTR | 50.0% | |
ACCGAACTGGCGAATCATTC+AGG | - | Chr5:72751206-72751225 | None:intergenic | 50.0% | |
ATGCAGTGACCTGATACCAC+AGG | + | Chr5:72752838-72752857 | MsG0580027999.01.T01:CDS | 50.0% | |
CCGACAAAACCTCTTGGAGA+TGG | - | Chr5:72750994-72751013 | None:intergenic | 50.0% | |
CCTCACTGAGAACTCACCTA+AGG | + | Chr5:72752662-72752681 | MsG0580027999.01.T01:CDS | 50.0% | |
CCTTAGGTGAGTTCTCAGTG+AGG | - | Chr5:72752665-72752684 | None:intergenic | 50.0% | |
CGTGTTGAACTTCGTCAACG+AGG | + | Chr5:72749967-72749986 | MsG0580027999.01.T01:CDS | 50.0% | |
CTCGAACCCTAAACAAACCC+CGG | - | Chr5:72751051-72751070 | None:intergenic | 50.0% | |
GAACATTGCAGGAGGAGCTT+GGG | + | Chr5:72752777-72752796 | MsG0580027999.01.T01:intron | 50.0% | |
GCCGCTGAATACGCAAAATG+TGG | + | Chr5:72750123-72750142 | MsG0580027999.01.T01:CDS | 50.0% | |
GCTTCTTACCCTGTGGTATC+AGG | - | Chr5:72752850-72752869 | None:intergenic | 50.0% | |
TGAACATTGCAGGAGGAGCT+TGG | + | Chr5:72752776-72752795 | MsG0580027999.01.T01:intron | 50.0% | |
TGCAGTGACCTGATACCACA+GGG | + | Chr5:72752839-72752858 | MsG0580027999.01.T01:CDS | 50.0% | |
TGGTTCCGTCCCAATTTGAG+CGG | + | Chr5:72751159-72751178 | MsG0580027999.01.T01:intron | 50.0% | |
! | AGCGGCGATACAGAAAGCAT+TGG | + | Chr5:72750177-72750196 | MsG0580027999.01.T01:CDS | 50.0% |
! | GGGGTTTGTTTAGGGTTCGA+GGG | + | Chr5:72751050-72751069 | MsG0580027999.01.T01:intron | 50.0% |
! | GGGTTTGTTTAGGGTTCGAG+GGG | + | Chr5:72751051-72751070 | MsG0580027999.01.T01:intron | 50.0% |
!! | CGCGGTTTGTTTCTGGTTTG+AGG | + | Chr5:72750603-72750622 | MsG0580027999.01.T01:intron | 50.0% |
!! | GTGGAGGTGTTACTTTGGTG+AGG | + | Chr5:72752547-72752566 | MsG0580027999.01.T01:CDS | 50.0% |
AACTCACCAGGGCATGGTCT+CGG | + | Chr5:72753061-72753080 | MsG0580027999.01.T01:three_prime_UTR | 55.0% | |
ACAGGGTAAGAAGCGGCCAA+GGG | + | Chr5:72752856-72752875 | MsG0580027999.01.T01:CDS | 55.0% | |
CGGACAAAACCACTGGGTGA+TGG | - | Chr5:72751782-72751801 | None:intergenic | 55.0% | |
TCAACTGCCACGCGTTCTTC+TGG | - | Chr5:72752573-72752592 | None:intergenic | 55.0% | |
! | CGGGGTTTGTTTAGGGTTCG+AGG | + | Chr5:72751049-72751068 | MsG0580027999.01.T01:intron | 55.0% |
ATTGCACCGAGACCATGCCC+TGG | - | Chr5:72753070-72753089 | None:intergenic | 60.0% | |
CACAGGGTAAGAAGCGGCCA+AGG | + | Chr5:72752855-72752874 | MsG0580027999.01.T01:CDS | 60.0% | |
CAGGGTAAGAAGCGGCCAAG+GGG | + | Chr5:72752857-72752876 | MsG0580027999.01.T01:CDS | 60.0% | |
CTTGGCCGCTTCTTACCCTG+TGG | - | Chr5:72752857-72752876 | None:intergenic | 60.0% | |
GGTGAGGCCAGAAGAACGCG+TGG | + | Chr5:72752563-72752582 | MsG0580027999.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 72749779 | 72753168 | 72749779 | ID=MsG0580027999.01;Name=MsG0580027999.01 |
Chr5 | mRNA | 72749779 | 72753168 | 72749779 | ID=MsG0580027999.01.T01;Parent=MsG0580027999.01;Name=MsG0580027999.01.T01;_AED=0.37;_eAED=0.37;_QI=69|1|1|1|1|1|6|282|226 |
Chr5 | exon | 72749779 | 72749875 | 72749779 | ID=MsG0580027999.01.T01:exon:4625;Parent=MsG0580027999.01.T01 |
Chr5 | exon | 72749963 | 72749988 | 72749963 | ID=MsG0580027999.01.T01:exon:4626;Parent=MsG0580027999.01.T01 |
Chr5 | exon | 72750115 | 72750382 | 72750115 | ID=MsG0580027999.01.T01:exon:4627;Parent=MsG0580027999.01.T01 |
Chr5 | exon | 72752333 | 72752403 | 72752333 | ID=MsG0580027999.01.T01:exon:4628;Parent=MsG0580027999.01.T01 |
Chr5 | exon | 72752513 | 72752701 | 72752513 | ID=MsG0580027999.01.T01:exon:4629;Parent=MsG0580027999.01.T01 |
Chr5 | exon | 72752788 | 72753168 | 72752788 | ID=MsG0580027999.01.T01:exon:4630;Parent=MsG0580027999.01.T01 |
Chr5 | five_prime_UTR | 72749779 | 72749847 | 72749779 | ID=MsG0580027999.01.T01:five_prime_utr;Parent=MsG0580027999.01.T01 |
Chr5 | CDS | 72749848 | 72749875 | 72749848 | ID=MsG0580027999.01.T01:cds;Parent=MsG0580027999.01.T01 |
Chr5 | CDS | 72749963 | 72749988 | 72749963 | ID=MsG0580027999.01.T01:cds;Parent=MsG0580027999.01.T01 |
Chr5 | CDS | 72750115 | 72750382 | 72750115 | ID=MsG0580027999.01.T01:cds;Parent=MsG0580027999.01.T01 |
Chr5 | CDS | 72752333 | 72752403 | 72752333 | ID=MsG0580027999.01.T01:cds;Parent=MsG0580027999.01.T01 |
Chr5 | CDS | 72752513 | 72752701 | 72752513 | ID=MsG0580027999.01.T01:cds;Parent=MsG0580027999.01.T01 |
Chr5 | CDS | 72752788 | 72752886 | 72752788 | ID=MsG0580027999.01.T01:cds;Parent=MsG0580027999.01.T01 |
Chr5 | three_prime_UTR | 72752887 | 72753168 | 72752887 | ID=MsG0580027999.01.T01:three_prime_utr;Parent=MsG0580027999.01.T01 |
Gene Sequence |
Protein sequence |