AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017258.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017258.01.T01 MTR_1g016630 57.576 165 40 2 53 187 96 260 2.63e-58 184
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017258.01.T01 AT3G20430 47.853 163 55 2 53 186 97 258 7.03e-47 154

Find 47 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATCTCTTTGTAGGTCTT+TGG 0.213260 3:-94164282 None:intergenic
TTGAGAAAATCATCTTTCTT+TGG 0.250993 3:-94164705 None:intergenic
GATATTTGTCATCACTATTC+AGG 0.279957 3:+94160381 MsG0380017258.01.T01:CDS
TATTAATGCAGAAGCAATTC+AGG 0.317250 3:+94164655 MsG0380017258.01.T01:intron
GTCTACCATCAGCAGTCTTT+TGG 0.323934 3:-94164209 None:intergenic
GTATTTAGTTGTTTAACATT+TGG 0.358786 3:-94164681 None:intergenic
CTGCTGATGGTAGACGATTT+CGG 0.382090 3:+94164217 MsG0380017258.01.T01:CDS
GGTTTGGCCTTATCATTTGC+TGG 0.387229 3:+94164728 MsG0380017258.01.T01:CDS
GAAAAGAGCAAAAGAGTTTG+AGG 0.403168 3:+94164305 MsG0380017258.01.T01:CDS
TACACTGCTGCGGGTTGTCT+TGG 0.419749 3:+94162153 MsG0380017258.01.T01:CDS
GACGGTGCAATTCAAGGAAT+AGG 0.431631 3:+94160405 MsG0380017258.01.T01:CDS
TCATTTGCTGGCAGTGATCA+AGG 0.433421 3:+94164740 MsG0380017258.01.T01:CDS
AGTACAGTTGGCGCCGTCTG+TGG 0.434474 3:-94160483 None:intergenic
TGTGGAACATCATAAAGGTT+CGG 0.434881 3:+94164256 MsG0380017258.01.T01:CDS
GTGGAACATCATAAAGGTTC+GGG 0.443091 3:+94164257 MsG0380017258.01.T01:CDS
GTACAGTTGGCGCCGTCTGT+GGG 0.443363 3:-94160482 None:intergenic
ATGGTAGACGATTTCGGAGT+GGG 0.444653 3:+94164223 MsG0380017258.01.T01:CDS
AGATCATCATCATAGGAAAC+AGG 0.457123 3:-94164866 None:intergenic
ACGGTGCAATTCAAGGAATA+GGG 0.459624 3:+94160406 MsG0380017258.01.T01:CDS
TGCGATTCAAAGGTGTGGCC+CGG 0.466618 3:+94160443 MsG0380017258.01.T01:CDS
TCCTATGATGATGATCTACT+TGG 0.467434 3:+94164872 MsG0380017258.01.T01:CDS
TCAGGCGACGGTGCAATTCA+AGG 0.488591 3:+94160399 MsG0380017258.01.T01:CDS
TCCAAGTAGATCATCATCAT+AGG 0.495710 3:-94164873 None:intergenic
CATACTGTGGAACATCATAA+AGG 0.500400 3:+94164251 MsG0380017258.01.T01:CDS
ATCACTGCCAGCAAATGATA+AGG 0.511776 3:-94164735 None:intergenic
AGTCATGTTGCATCATTGAC+TGG 0.517971 3:-94164902 None:intergenic
TTTCTCTTTCAGATGACGAC+AGG 0.526223 3:-94162115 None:intergenic
TTGGCGCCGTCTGTGGGGAC+CGG 0.526244 3:-94160476 None:intergenic
TGTTCACGATTGCGATTCAA+AGG 0.530811 3:+94160433 MsG0380017258.01.T01:CDS
TACAGTTGGCGCCGTCTGTG+GGG 0.562539 3:-94160481 None:intergenic
GAATATGCTAAGGTCAGAGA+TGG 0.566607 3:+94160359 None:intergenic
GGGGACCGGTAAAACTGACC+CGG 0.572265 3:-94160462 None:intergenic
GCGATTCAAAGGTGTGGCCC+GGG 0.576281 3:+94160444 MsG0380017258.01.T01:CDS
AGAGAAATCGGAATATGCTA+AGG 0.586459 3:+94160349 None:intergenic
TGTCATCACTATTCAGGCGA+CGG 0.588541 3:+94160387 MsG0380017258.01.T01:CDS
GTTGATGCAATACAGGCTTG+TGG 0.597539 3:+94164183 MsG0380017258.01.T01:CDS
ACTGTACTTGCAGAAAAGTA+CGG 0.600174 3:+94160498 MsG0380017258.01.T01:CDS
ATTAAGTGATATCATCAAAG+AGG 0.607067 3:+94162185 MsG0380017258.01.T01:CDS
TGGTAGACGATTTCGGAGTG+GGG 0.613310 3:+94164224 MsG0380017258.01.T01:CDS
ACGATTGCGATTCAAAGGTG+TGG 0.617627 3:+94160438 MsG0380017258.01.T01:CDS
GGTAGACGATTTCGGAGTGG+GGG 0.617630 3:+94164225 MsG0380017258.01.T01:CDS
TATATGGTATACACTGCTGC+GGG 0.621075 3:+94162144 MsG0380017258.01.T01:CDS
GGGACCGGTAAAACTGACCC+GGG 0.621264 3:-94160461 None:intergenic
ATATATGGTATACACTGCTG+CGG 0.631527 3:+94162143 MsG0380017258.01.T01:CDS
GGAGGCCAAAAGACTGCTGA+TGG 0.663490 3:+94164204 MsG0380017258.01.T01:CDS
GATGGTAGACGATTTCGGAG+TGG 0.663553 3:+94164222 MsG0380017258.01.T01:CDS
GATGCAATACAGGCTTGTGG+AGG 0.676395 3:+94164186 MsG0380017258.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTGTAAAAAAATGTT+TGG + Chr3:94161272-94161291 MsG0380017258.01.T01:intron 10.0%
!!! TGAATAATCTTTATATTTTT+GGG + Chr3:94164332-94164351 MsG0380017258.01.T01:intron 10.0%
!! AATTTACAATATATCAACTT+AGG - Chr3:94164145-94164164 None:intergenic 15.0%
!! AGTCTAATATTAAGTATTTA+AGG + Chr3:94160936-94160955 MsG0380017258.01.T01:intron 15.0%
!! GTCTAATATTAAGTATTTAA+GGG + Chr3:94160937-94160956 MsG0380017258.01.T01:intron 15.0%
!! TCAAATGACTTAAATAATAT+TGG + Chr3:94162350-94162369 MsG0380017258.01.T01:intron 15.0%
!! TTTCTGAATATTTCTTAATT+TGG + Chr3:94162843-94162862 MsG0380017258.01.T01:intron 15.0%
!!! ATAATTTTGACATTTATTTC+CGG - Chr3:94161378-94161397 None:intergenic 15.0%
!!! ATTTTTTTACAAAAATTCCT+AGG - Chr3:94161269-94161288 None:intergenic 15.0%
!!! GTGAATAATCTTTATATTTT+TGG + Chr3:94164331-94164350 MsG0380017258.01.T01:intron 15.0%
!!! TAAAAAACATTTTATAGTGT+CGG + Chr3:94161102-94161121 MsG0380017258.01.T01:intron 15.0%
!! AAAAATAAGTAAAGTCACTA+CGG - Chr3:94163887-94163906 None:intergenic 20.0%
!! ATGATTTGAACAAATGTATA+TGG - Chr3:94162699-94162718 None:intergenic 20.0%
!! ATGTGTACATAAAATATAGA+TGG - Chr3:94164041-94164060 None:intergenic 20.0%
!! CAGAAAATATGAAATATGTA+TGG - Chr3:94161435-94161454 None:intergenic 20.0%
!! GATTAAATTAAGTAAAACAG+AGG - Chr3:94162784-94162803 None:intergenic 20.0%
!! GCAAATAAATAAAGAAACTT+TGG + Chr3:94163598-94163617 MsG0380017258.01.T01:intron 20.0%
!! GTATTTAGTTGTTTAACATT+TGG - Chr3:94164684-94164703 None:intergenic 20.0%
!!! AAATTTTCTTTAGAAGTAAC+TGG - Chr3:94164818-94164837 None:intergenic 20.0%
!!! ATAATCTTTATATTTTTGGG+TGG + Chr3:94164335-94164354 MsG0380017258.01.T01:intron 20.0%
!!! ATATAGTGTTTATTTTGGTT+GGG + Chr3:94163743-94163762 MsG0380017258.01.T01:intron 20.0%
!!! TAATCTTTATATTTTTGGGT+GGG + Chr3:94164336-94164355 MsG0380017258.01.T01:intron 20.0%
!!! TAATTTTGACATTTATTTCC+GGG - Chr3:94161377-94161396 None:intergenic 20.0%
!!! TATGAAATATGTATGGTTTT+TGG - Chr3:94161428-94161447 None:intergenic 20.0%
!!! TATTTTTGTTTCGAAATTAG+AGG + Chr3:94164071-94164090 MsG0380017258.01.T01:intron 20.0%
!!! TCTTTTATGTAAAGCAAATA+TGG + Chr3:94163451-94163470 MsG0380017258.01.T01:intron 20.0%
!!! TTAGTCTTATGCTTTTTTAT+TGG + Chr3:94160841-94160860 MsG0380017258.01.T01:intron 20.0%
!!! TTTGCATATAGTGTTTATTT+TGG + Chr3:94163738-94163757 MsG0380017258.01.T01:intron 20.0%
! AAAAATTAAAAATGGCTGCA+TGG - Chr3:94163100-94163119 None:intergenic 25.0%
! AAAGTTTCCATGTATTTAGA+AGG - Chr3:94162610-94162629 None:intergenic 25.0%
! AACCCAATTAAACTAAATAC+TGG - Chr3:94163669-94163688 None:intergenic 25.0%
! AAGTTTCCATGTATTTAGAA+GGG - Chr3:94162609-94162628 None:intergenic 25.0%
! AATACTCATGTCAAACTTAA+TGG - Chr3:94161494-94161513 None:intergenic 25.0%
! AATGTAAGAAACAGAGAAAA+TGG - Chr3:94162564-94162583 None:intergenic 25.0%
! AATTAAAATCTGCAAGGTTA+GGG - Chr3:94163140-94163159 None:intergenic 25.0%
! AGGATACAAAAATAATTCCT+TGG + Chr3:94161206-94161225 MsG0380017258.01.T01:intron 25.0%
! AGTTGAGGTTATATACTATT+TGG + Chr3:94163032-94163051 MsG0380017258.01.T01:intron 25.0%
! AGTTTATTAAGCCATCAATA+AGG - Chr3:94160881-94160900 None:intergenic 25.0%
! ATATATTGTAAATTTGCACG+CGG + Chr3:94164151-94164170 MsG0380017258.01.T01:intron 25.0%
! ATGTAAGAAACAGAGAAAAT+GGG - Chr3:94162563-94162582 None:intergenic 25.0%
! ATTAAGTGATATCATCAAAG+AGG + Chr3:94162185-94162204 MsG0380017258.01.T01:CDS 25.0%
! CTTGTAGTAACTATTAAGTA+GGG + Chr3:94164462-94164481 MsG0380017258.01.T01:intron 25.0%
! GAAAGAGAAAAAGTCATATA+TGG + Chr3:94162128-94162147 MsG0380017258.01.T01:CDS 25.0%
! TAGTTTAGATTCAGAAATCT+TGG - Chr3:94163823-94163842 None:intergenic 25.0%
! TATCCAAATAAACCAAGTAA+AGG + Chr3:94164500-94164519 MsG0380017258.01.T01:intron 25.0%
! TGGTCTCTTGAATTTAAAAA+GGG - Chr3:94161408-94161427 None:intergenic 25.0%
! TGGTTTAAAAAGTAAAATCC+CGG + Chr3:94161356-94161375 MsG0380017258.01.T01:intron 25.0%
! TGTACATAAAATATAGATGG+TGG - Chr3:94164038-94164057 None:intergenic 25.0%
! TTATTTCCCATCTCTTTAAT+AGG + Chr3:94162955-94162974 MsG0380017258.01.T01:intron 25.0%
! TTGAGAAAATCATCTTTCTT+TGG - Chr3:94164708-94164727 None:intergenic 25.0%
! TTGGTCTCTTGAATTTAAAA+AGG - Chr3:94161409-94161428 None:intergenic 25.0%
! TTGTAGTAACTATTAAGTAG+GGG + Chr3:94164463-94164482 MsG0380017258.01.T01:intron 25.0%
!! AAAGAAAGATGATTTTCTCA+AGG + Chr3:94164707-94164726 MsG0380017258.01.T01:CDS 25.0%
!! ATAATATTGGTGATACTGTT+TGG + Chr3:94162363-94162382 MsG0380017258.01.T01:intron 25.0%
!! ATTTTATATCTGTTCATGAC+AGG + Chr3:94164834-94164853 MsG0380017258.01.T01:intron 25.0%
!! TATTTTCTGCTAATAAAGCA+AGG + Chr3:94161446-94161465 MsG0380017258.01.T01:intron 25.0%
!! TCTACTTGAAGATGTTATTT+CGG + Chr3:94162399-94162418 MsG0380017258.01.T01:intron 25.0%
!! TCTTTTCATTATCTCTTTGT+AGG - Chr3:94164292-94164311 None:intergenic 25.0%
!!! AATCTTTATATTTTTGGGTG+GGG + Chr3:94164337-94164356 MsG0380017258.01.T01:intron 25.0%
!!! CATATAGTGTTTATTTTGGT+TGG + Chr3:94163742-94163761 MsG0380017258.01.T01:intron 25.0%
!!! CTGTTCCATTTTTTTATAGA+AGG + Chr3:94161619-94161638 MsG0380017258.01.T01:intron 25.0%
!!! GACTATGCATTGTTTTTTTT+TGG + Chr3:94161554-94161573 MsG0380017258.01.T01:intron 25.0%
!!! GTAGTGACTTTACTTATTTT+TGG + Chr3:94163886-94163905 MsG0380017258.01.T01:intron 25.0%
!!! TTTTGAGAATGCTAAAAACA+TGG + Chr3:94161332-94161351 MsG0380017258.01.T01:intron 25.0%
AAAATGCCTAGCATAGTTAA+AGG - Chr3:94163639-94163658 None:intergenic 30.0%
AACCGTCATAATATTCCTAA+AGG - Chr3:94160796-94160815 None:intergenic 30.0%
AAGAATGCAAAACTCTTATG+GGG - Chr3:94161911-94161930 None:intergenic 30.0%
AAGCCTTTACTTGGTTTATT+TGG - Chr3:94164506-94164525 None:intergenic 30.0%
AAGGAAACTTAAAATTTGCC+TGG - Chr3:94161815-94161834 None:intergenic 30.0%
AAGTATTTAAGGGTCTGTTT+GGG + Chr3:94160947-94160966 MsG0380017258.01.T01:intron 30.0%
AATAAAAAATGGCAGATCGT+GGG + Chr3:94161760-94161779 MsG0380017258.01.T01:intron 30.0%
AATTTACAAAAGAAGTTCCC+AGG - Chr3:94161313-94161332 None:intergenic 30.0%
ACTAAATTTGAGTGCATCAT+AGG - Chr3:94162220-94162239 None:intergenic 30.0%
AGAAGAATGCAAAACTCTTA+TGG - Chr3:94161913-94161932 None:intergenic 30.0%
AGCCTTAAAAACCTTATTGA+TGG + Chr3:94160867-94160886 MsG0380017258.01.T01:intron 30.0%
AGGAAACTTAAAATTTGCCT+GGG - Chr3:94161814-94161833 None:intergenic 30.0%
AGGCTTAGAAAATCGATTAT+GGG - Chr3:94163322-94163341 None:intergenic 30.0%
ATAGTTACTACAAGCATACA+TGG - Chr3:94164456-94164475 None:intergenic 30.0%
ATTAAGTAAAACAGAGGTTG+TGG - Chr3:94162778-94162797 None:intergenic 30.0%
ATTATCTCTTTGTAGGTCTT+TGG - Chr3:94164285-94164304 None:intergenic 30.0%
CACGCGTCAAAAATTAAAAA+TGG - Chr3:94163108-94163127 None:intergenic 30.0%
CTAAATTTGAGTGCATCATA+GGG - Chr3:94162219-94162238 None:intergenic 30.0%
GAAAAACATATTCCAGTGTT+TGG - Chr3:94161842-94161861 None:intergenic 30.0%
GAAGAATGCAAAACTCTTAT+GGG - Chr3:94161912-94161931 None:intergenic 30.0%
GAAGTCACTATATATGAACA+TGG - Chr3:94163284-94163303 None:intergenic 30.0%
GAATATTATGACGGTTCAAT+TGG + Chr3:94160800-94160819 MsG0380017258.01.T01:intron 30.0%
GAATTAAAATCTGCAAGGTT+AGG - Chr3:94163141-94163160 None:intergenic 30.0%
GAGGTTATATACTATTTGGA+CGG + Chr3:94163036-94163055 MsG0380017258.01.T01:intron 30.0%
GATATTTGTCATCACTATTC+AGG + Chr3:94160381-94160400 MsG0380017258.01.T01:CDS 30.0%
GCTTGTAGTAACTATTAAGT+AGG + Chr3:94164461-94164480 MsG0380017258.01.T01:intron 30.0%
GGTTAACAATTTGAATTCCT+GGG + Chr3:94161293-94161312 MsG0380017258.01.T01:intron 30.0%
GTAAGAAATTAAGTGATGAG+AGG - Chr3:94162517-94162536 None:intergenic 30.0%
TAAGGAATACTAGGATTCTA+GGG + Chr3:94160521-94160540 MsG0380017258.01.T01:intron 30.0%
TAAGTATTTAAGGGTCTGTT+TGG + Chr3:94160946-94160965 MsG0380017258.01.T01:intron 30.0%
TAATTCCCATCATATATTCC+CGG - Chr3:94161242-94161261 None:intergenic 30.0%
TAGAAGGCAGGAAAAAAAAT+TGG + Chr3:94161635-94161654 MsG0380017258.01.T01:intron 30.0%
TAGTATTTATAGCCTGTCAT+GGG + Chr3:94160585-94160604 MsG0380017258.01.T01:intron 30.0%
TATTAATGCAGAAGCAATTC+AGG + Chr3:94164655-94164674 MsG0380017258.01.T01:intron 30.0%
TCCTGCCTTCTATAAAAAAA+TGG - Chr3:94161627-94161646 None:intergenic 30.0%
TCGTTATTTACAAACTGTGA+AGG + Chr3:94163223-94163242 MsG0380017258.01.T01:intron 30.0%
TCTCTCACTGGAATAAAAAA+TGG + Chr3:94161749-94161768 MsG0380017258.01.T01:intron 30.0%
TGGATGAAAGAAAAACAAGA+CGG - Chr3:94162445-94162464 None:intergenic 30.0%
TGGTTAACAATTTGAATTCC+TGG + Chr3:94161292-94161311 MsG0380017258.01.T01:intron 30.0%
TTGTCAAGATTAATCGTCAA+TGG + Chr3:94162631-94162650 MsG0380017258.01.T01:intron 30.0%
TTTAAAAGGCGAGCAAATTA+TGG - Chr3:94163001-94163020 None:intergenic 30.0%
! AAAAAGCATAAGACTAAGCT+TGG - Chr3:94160838-94160857 None:intergenic 30.0%
! AACACTGGAATATGTTTTTC+CGG + Chr3:94161842-94161861 MsG0380017258.01.T01:intron 30.0%
! AAGATGATTTTCTCAAGGTT+TGG + Chr3:94164712-94164731 MsG0380017258.01.T01:CDS 30.0%
! AGCCATCAATAAGGTTTTTA+AGG - Chr3:94160872-94160891 None:intergenic 30.0%
! AGCCTTTAGGAATATTATGA+CGG + Chr3:94160791-94160810 MsG0380017258.01.T01:intron 30.0%
! AGGCCAGTATTTAGTTTAAT+TGG + Chr3:94163663-94163682 MsG0380017258.01.T01:intron 30.0%
! ATGATGGGAATTATATTCCT+AGG + Chr3:94161249-94161268 MsG0380017258.01.T01:intron 30.0%
! CTATGCTAGGCATTTTTAAA+AGG + Chr3:94163643-94163662 MsG0380017258.01.T01:intron 30.0%
! GATTTTCCTTTAACTATGCT+AGG + Chr3:94163630-94163649 MsG0380017258.01.T01:intron 30.0%
! GGCCAGTATTTAGTTTAATT+GGG + Chr3:94163664-94163683 MsG0380017258.01.T01:intron 30.0%
! TTCAAATCATCTTCGTTTTC+TGG + Chr3:94162709-94162728 MsG0380017258.01.T01:intron 30.0%
!! AATTGAGGGTATCATATCAT+TGG + Chr3:94163859-94163878 MsG0380017258.01.T01:intron 30.0%
!! GGGTATTTATGTATTTTAGG+CGG + Chr3:94160642-94160661 MsG0380017258.01.T01:intron 30.0%
!!! ATAATTTGCTCGCCTTTTAA+AGG + Chr3:94163000-94163019 MsG0380017258.01.T01:intron 30.0%
!!! ATTTTTTATTCCAGTGAGAG+AGG - Chr3:94161750-94161769 None:intergenic 30.0%
!!! CAGGGGTATTTATGTATTTT+AGG + Chr3:94160639-94160658 MsG0380017258.01.T01:intron 30.0%
!!! TCAATAAGGTTTTTAAGGCT+AGG - Chr3:94160867-94160886 None:intergenic 30.0%
!!! TCCATTTTTTTATAGAAGGC+AGG + Chr3:94161623-94161642 MsG0380017258.01.T01:intron 30.0%
!!! TTTTTTATTCCAGTGAGAGA+GGG - Chr3:94161749-94161768 None:intergenic 30.0%
AAAGGAAAACGGAAGATTCT+AGG - Chr3:94163797-94163816 None:intergenic 35.0%
AAAGTACGGTAAGGAATACT+AGG + Chr3:94160512-94160531 MsG0380017258.01.T01:intron 35.0%
AACAAAGAGAAGCCTTTACT+TGG - Chr3:94164515-94164534 None:intergenic 35.0%
AAGAAACAGAGAAAATGGGT+GGG - Chr3:94162559-94162578 None:intergenic 35.0%
AAGGCAGGAAAAAAAATTGG+AGG + Chr3:94161638-94161657 MsG0380017258.01.T01:intron 35.0%
AATCTTGGCACAAAGGAAAA+CGG - Chr3:94163808-94163827 None:intergenic 35.0%
AATTCCCATCATATATTCCC+GGG - Chr3:94161241-94161260 None:intergenic 35.0%
ACTCTCACCTTTCCTTTAAA+AGG - Chr3:94163015-94163034 None:intergenic 35.0%
ACTGTACTTGCAGAAAAGTA+CGG + Chr3:94160498-94160517 MsG0380017258.01.T01:CDS 35.0%
AGATCATCATCATAGGAAAC+AGG - Chr3:94164869-94164888 None:intergenic 35.0%
AGGCAGGAAAAAAAATTGGA+GGG + Chr3:94161639-94161658 MsG0380017258.01.T01:intron 35.0%
ATAGGACTGTGACTATGATT+TGG + Chr3:94162973-94162992 MsG0380017258.01.T01:intron 35.0%
ATATATGGTATACACTGCTG+CGG + Chr3:94162143-94162162 MsG0380017258.01.T01:CDS 35.0%
ATCCTTCCCTTCTAAATACA+TGG + Chr3:94162600-94162619 MsG0380017258.01.T01:intron 35.0%
ATCTTCAAGTAGACAGATAC+TGG - Chr3:94162392-94162411 None:intergenic 35.0%
ATTCAGAAATCTTGGCACAA+AGG - Chr3:94163815-94163834 None:intergenic 35.0%
ATTCCTTGGAATAACTTTCC+CGG + Chr3:94161220-94161239 MsG0380017258.01.T01:intron 35.0%
ATTTGATACAGGGACAAACA+AGG - Chr3:94162017-94162036 None:intergenic 35.0%
CACAGTCCTATTAAAGAGAT+GGG - Chr3:94162964-94162983 None:intergenic 35.0%
CAGGCTTAGAAAATCGATTA+TGG - Chr3:94163323-94163342 None:intergenic 35.0%
CATACTGTGGAACATCATAA+AGG + Chr3:94164251-94164270 MsG0380017258.01.T01:CDS 35.0%
GAAAAGAGCAAAAGAGTTTG+AGG + Chr3:94164305-94164324 MsG0380017258.01.T01:CDS 35.0%
GAAAGTTGTCATAAGACCAT+TGG - Chr3:94162827-94162846 None:intergenic 35.0%
GAATAAAAAATGGCAGATCG+TGG + Chr3:94161759-94161778 MsG0380017258.01.T01:intron 35.0%
GACTGAATTCCACATTCTAT+TGG - Chr3:94160920-94160939 None:intergenic 35.0%
GAGAATGCTAAAAACATGGT+TGG + Chr3:94161336-94161355 MsG0380017258.01.T01:intron 35.0%
GATAAGCATAACCAGATCAA+AGG - Chr3:94163063-94163082 None:intergenic 35.0%
GCTTAGAAAATCGATTATGG+GGG - Chr3:94163320-94163339 None:intergenic 35.0%
GGCTTAGAAAATCGATTATG+GGG - Chr3:94163321-94163340 None:intergenic 35.0%
GTAAGGAATACTAGGATTCT+AGG + Chr3:94160520-94160539 MsG0380017258.01.T01:intron 35.0%
GTAGTATTTATAGCCTGTCA+TGG + Chr3:94160584-94160603 MsG0380017258.01.T01:intron 35.0%
TAAGAAACAGAGAAAATGGG+TGG - Chr3:94162560-94162579 None:intergenic 35.0%
TATCTGTTCATGACAGGTTA+AGG + Chr3:94164840-94164859 MsG0380017258.01.T01:intron 35.0%
TATTCCAGTGTTTGGTAAGA+AGG - Chr3:94161834-94161853 None:intergenic 35.0%
TCAAGATTAATCGTCAATGG+TGG + Chr3:94162634-94162653 MsG0380017258.01.T01:intron 35.0%
TCACAGTCCTATTAAAGAGA+TGG - Chr3:94162965-94162984 None:intergenic 35.0%
TCCAAGTAGATCATCATCAT+AGG - Chr3:94164876-94164895 None:intergenic 35.0%
TCTTCAAGTAGACAGATACT+GGG - Chr3:94162391-94162410 None:intergenic 35.0%
TGAAAGAAAAACAAGACGGT+TGG - Chr3:94162441-94162460 None:intergenic 35.0%
TGAATGTGAGCATAAAGTCA+CGG + Chr3:94161991-94162010 MsG0380017258.01.T01:intron 35.0%
TGTGAAATACCATTGTCACT+TGG + Chr3:94162285-94162304 MsG0380017258.01.T01:intron 35.0%
TGTGGAACATCATAAAGGTT+CGG + Chr3:94164256-94164275 MsG0380017258.01.T01:CDS 35.0%
TTAAAACAAACACCCCCTTT+GGG - Chr3:94161187-94161206 None:intergenic 35.0%
TTACCGTCAAACCTAAATGT+GGG + Chr3:94163688-94163707 MsG0380017258.01.T01:intron 35.0%
TTCCATGTATTTAGAAGGGA+AGG - Chr3:94162605-94162624 None:intergenic 35.0%
TTGACGGTTTAACTGAGATA+TGG + Chr3:94162664-94162683 MsG0380017258.01.T01:intron 35.0%
TTGCATTTCTGATGCAAGAA+AGG - Chr3:94164783-94164802 None:intergenic 35.0%
TTTACCGTCAAACCTAAATG+TGG + Chr3:94163687-94163706 MsG0380017258.01.T01:intron 35.0%
TTTCATCCAAAGCTGTTTGA+AGG + Chr3:94162456-94162475 MsG0380017258.01.T01:intron 35.0%
TTTGTTTCCGAGACATGAAA+TGG - Chr3:94161886-94161905 None:intergenic 35.0%
! AATTTCAGCTCTGACATTGT+TGG - Chr3:94163426-94163445 None:intergenic 35.0%
! CAAATTTTGTCCAGTTCCAA+TGG + Chr3:94162808-94162827 MsG0380017258.01.T01:intron 35.0%
! CATTTGAAGCAGTATTGCTT+AGG - Chr3:94162337-94162356 None:intergenic 35.0%
! GTCTGGAATTAAAATCTGCA+AGG - Chr3:94163146-94163165 None:intergenic 35.0%
! TACTTTTCTGCAAGTACAGT+TGG - Chr3:94160498-94160517 None:intergenic 35.0%
! TATCCCACATTTAGGTTTGA+CGG - Chr3:94163694-94163713 None:intergenic 35.0%
! TCCTATGATGATGATCTACT+TGG + Chr3:94164872-94164891 MsG0380017258.01.T01:CDS 35.0%
! TTTTTATTCCAGTGAGAGAG+GGG - Chr3:94161748-94161767 None:intergenic 35.0%
!! AATACTAGGATTCTAGGGTT+TGG + Chr3:94160526-94160545 MsG0380017258.01.T01:intron 35.0%
!!! GTTTTAGGTTGATGCAATAC+AGG + Chr3:94164176-94164195 MsG0380017258.01.T01:intron 35.0%
ACATAAATACCCCTGTTGCT+TGG - Chr3:94160634-94160653 None:intergenic 40.0%
ACGGTGCAATTCAAGGAATA+GGG + Chr3:94160406-94160425 MsG0380017258.01.T01:CDS 40.0%
ACTTGAAACACATCACGTGA+TGG + Chr3:94162749-94162768 MsG0380017258.01.T01:intron 40.0%
ACTTTCCCGGGAATATATGA+TGG + Chr3:94161233-94161252 MsG0380017258.01.T01:intron 40.0%
AGCAGATGACCAAAATTGAG+TGG - Chr3:94163773-94163792 None:intergenic 40.0%
AGCTGCTGTACATTTGATAC+AGG - Chr3:94162028-94162047 None:intergenic 40.0%
AGTGAGACTATCCCACATTT+AGG - Chr3:94163702-94163721 None:intergenic 40.0%
ATCACGTGATGTGTTTCAAG+TGG - Chr3:94162750-94162769 None:intergenic 40.0%
ATCACTGCCAGCAAATGATA+AGG - Chr3:94164738-94164757 None:intergenic 40.0%
ATTCTATTGGATCACAGAGG+TGG - Chr3:94160907-94160926 None:intergenic 40.0%
ATTTAAGGGTCTGTTTGGGA+GGG + Chr3:94160951-94160970 MsG0380017258.01.T01:intron 40.0%
ATTTCACTTCGAGGTAGGTT+GGG - Chr3:94161972-94161991 None:intergenic 40.0%
CACATTCTATTGGATCACAG+AGG - Chr3:94160910-94160929 None:intergenic 40.0%
CACCAGAAACAACATGCTAA+TGG + Chr3:94161528-94161547 MsG0380017258.01.T01:intron 40.0%
CATTCATTTCACTTCGAGGT+AGG - Chr3:94161977-94161996 None:intergenic 40.0%
CCTGGGAATAAAAAATACCC+AGG - Chr3:94161797-94161816 None:intergenic 40.0%
CGAAATCCTTCAAACAGCTT+TGG - Chr3:94162465-94162484 None:intergenic 40.0%
CGTGGGTCAAATAAATTCCT+GGG + Chr3:94161777-94161796 MsG0380017258.01.T01:intron 40.0%
CTCACATTCATTTCACTTCG+AGG - Chr3:94161981-94162000 None:intergenic 40.0%
CTCTGTGATCCAATAGAATG+TGG + Chr3:94160908-94160927 MsG0380017258.01.T01:intron 40.0%
CTTAAAACAAACACCCCCTT+TGG - Chr3:94161188-94161207 None:intergenic 40.0%
CTTTCCCGGGAATATATGAT+GGG + Chr3:94161234-94161253 MsG0380017258.01.T01:intron 40.0%
GCTGCTGTACATTTGATACA+GGG - Chr3:94162027-94162046 None:intergenic 40.0%
GGCAGGAAAAAAAATTGGAG+GGG + Chr3:94161640-94161659 MsG0380017258.01.T01:intron 40.0%
GGGAAACAGACAAAAAGCAA+GGG - Chr3:94162539-94162558 None:intergenic 40.0%
GTGGAACATCATAAAGGTTC+GGG + Chr3:94164257-94164276 MsG0380017258.01.T01:CDS 40.0%
GTTGGAAAATCTCTATTCCC+AGG - Chr3:94161726-94161745 None:intergenic 40.0%
GTTTCCTTCTTACCAAACAC+TGG + Chr3:94161827-94161846 MsG0380017258.01.T01:intron 40.0%
TAAACTAGCATTGTCGCAGT+GGG + Chr3:94163836-94163855 MsG0380017258.01.T01:intron 40.0%
TAAAGGAAAGGTGAGAGTTG+AGG + Chr3:94163017-94163036 MsG0380017258.01.T01:intron 40.0%
TATATGGTATACACTGCTGC+GGG + Chr3:94162144-94162163 MsG0380017258.01.T01:CDS 40.0%
TATGTGCCATATGCTTTGCA+TGG + Chr3:94163994-94164013 MsG0380017258.01.T01:intron 40.0%
TATTGTAAATTTGCACGCGG+AGG + Chr3:94164154-94164173 MsG0380017258.01.T01:intron 40.0%
TATTTAAGGGTCTGTTTGGG+AGG + Chr3:94160950-94160969 MsG0380017258.01.T01:intron 40.0%
TCGTGGGTCAAATAAATTCC+TGG + Chr3:94161776-94161795 MsG0380017258.01.T01:intron 40.0%
TGAACATGGAGTTCATTCCT+GGG + Chr3:94161706-94161725 MsG0380017258.01.T01:intron 40.0%
TGGGAAACAGACAAAAAGCA+AGG - Chr3:94162540-94162559 None:intergenic 40.0%
TGGGAATCCATTTCATGTCT+CGG + Chr3:94161876-94161895 MsG0380017258.01.T01:intron 40.0%
TGTCATAAGACCATTGGAAC+TGG - Chr3:94162821-94162840 None:intergenic 40.0%
TGTTCACGATTGCGATTCAA+AGG + Chr3:94160433-94160452 MsG0380017258.01.T01:CDS 40.0%
TTACTACAAGCATACATGGC+TGG - Chr3:94164452-94164471 None:intergenic 40.0%
TTCCAACTTCCAAGTGACAA+TGG - Chr3:94162297-94162316 None:intergenic 40.0%
TTCCTTGGAATAACTTTCCC+GGG + Chr3:94161221-94161240 MsG0380017258.01.T01:intron 40.0%
TTGAAGCAGTATTGCTTAGG+CGG - Chr3:94162334-94162353 None:intergenic 40.0%
TTGTCTCGTTGATACTTCGT+TGG + Chr3:94164379-94164398 MsG0380017258.01.T01:intron 40.0%
TTTCTCTTTCAGATGACGAC+AGG - Chr3:94162118-94162137 None:intergenic 40.0%
! AAATGGATTCCCAGGAATAG+AGG - Chr3:94161869-94161888 None:intergenic 40.0%
! ACTTGCAGAAAAGTACGGTA+AGG + Chr3:94160503-94160522 MsG0380017258.01.T01:intron 40.0%
! AGGTTTCTAGAAGCCTAGAA+GGG + Chr3:94160672-94160691 MsG0380017258.01.T01:intron 40.0%
! CAATGGTGGTGTTAGTTTGA+CGG + Chr3:94162648-94162667 MsG0380017258.01.T01:intron 40.0%
! CATAAATACCCCTGTTGCTT+GGG - Chr3:94160633-94160652 None:intergenic 40.0%
! GGGGATTTTTACTCTGAACA+TGG + Chr3:94161692-94161711 MsG0380017258.01.T01:intron 40.0%
! TACCATTGTCACTTGGAAGT+TGG + Chr3:94162292-94162311 MsG0380017258.01.T01:intron 40.0%
! TTGGGAAAGCCACTCAATTT+TGG + Chr3:94163761-94163780 MsG0380017258.01.T01:intron 40.0%
!! GTATTTTAGGCGGTTTCTAG+AGG + Chr3:94160652-94160671 MsG0380017258.01.T01:intron 40.0%
!! TACTCTTGAGAGCATTCTCA+AGG - Chr3:94160567-94160586 None:intergenic 40.0%
!! TCGTTGGTGGCAACTAAATT+CGG + Chr3:94164395-94164414 MsG0380017258.01.T01:intron 40.0%
!! TGAAGATGTTATTTCGGTGC+AGG + Chr3:94162405-94162424 MsG0380017258.01.T01:intron 40.0%
!! TGCCATTAGCATGTTGTTTC+TGG - Chr3:94161533-94161552 None:intergenic 40.0%
!! TGCTTGATCTTTGGTGTTCT+TGG + Chr3:94163190-94163209 MsG0380017258.01.T01:intron 40.0%
!! TTGCTCGCCTTTTAAAGGAA+AGG + Chr3:94163005-94163024 MsG0380017258.01.T01:intron 40.0%
!!! CAAAGGGGGTGTTTGTTTTA+AGG + Chr3:94161186-94161205 MsG0380017258.01.T01:intron 40.0%
!!! CCTGGGTATTTTTTATTCCC+AGG + Chr3:94161794-94161813 MsG0380017258.01.T01:intron 40.0%
AAAACAACGAACACTCCAGC+AGG - Chr3:94162905-94162924 None:intergenic 45.0%
ACGATTGCGATTCAAAGGTG+TGG + Chr3:94160438-94160457 MsG0380017258.01.T01:CDS 45.0%
ACGGTTCCATGCAAAGCATA+TGG - Chr3:94164003-94164022 None:intergenic 45.0%
AGAACGTGTGGGGTAAAGTA+GGG + Chr3:94161663-94161682 MsG0380017258.01.T01:intron 45.0%
AGATCAAGCAGAGGATTGGA+AGG - Chr3:94163180-94163199 None:intergenic 45.0%
ATGGTAGACGATTTCGGAGT+GGG + Chr3:94164223-94164242 MsG0380017258.01.T01:CDS 45.0%
ATTGTCGCAGTGGGAATTGA+GGG + Chr3:94163845-94163864 MsG0380017258.01.T01:intron 45.0%
ATTTGGACGGACCTTTGATC+TGG + Chr3:94163049-94163068 MsG0380017258.01.T01:intron 45.0%
CATTTCACTTCGAGGTAGGT+TGG - Chr3:94161973-94161992 None:intergenic 45.0%
CCAAAGATCAAGCAGAGGAT+TGG - Chr3:94163184-94163203 None:intergenic 45.0%
CCAATCCTCTGCTTGATCTT+TGG + Chr3:94163181-94163200 MsG0380017258.01.T01:intron 45.0%
CTAAACTAGCATTGTCGCAG+TGG + Chr3:94163835-94163854 MsG0380017258.01.T01:intron 45.0%
CTGAACATGGAGTTCATTCC+TGG + Chr3:94161705-94161724 MsG0380017258.01.T01:intron 45.0%
CTGCATGGTACTTGAAAGAG+TGG - Chr3:94163085-94163104 None:intergenic 45.0%
CTGCTGATGGTAGACGATTT+CGG + Chr3:94164217-94164236 MsG0380017258.01.T01:CDS 45.0%
GAACACCAAAGATCAAGCAG+AGG - Chr3:94163189-94163208 None:intergenic 45.0%
GACGGTGCAATTCAAGGAAT+AGG + Chr3:94160405-94160424 MsG0380017258.01.T01:CDS 45.0%
GGAAGGAGCAAACTATTGTC+TGG - Chr3:94163163-94163182 None:intergenic 45.0%
GTTGATGCAATACAGGCTTG+TGG + Chr3:94164183-94164202 MsG0380017258.01.T01:CDS 45.0%
GTTGGTTGCTACACTGAAGT+GGG - Chr3:94163408-94163427 None:intergenic 45.0%
TACACTGAAGTGGGCAAAAC+TGG - Chr3:94163399-94163418 None:intergenic 45.0%
TCCATCCAAACACACCCAAA+GGG + Chr3:94161170-94161189 MsG0380017258.01.T01:intron 45.0%
TCTCGTTGATACTTCGTTGG+TGG + Chr3:94164382-94164401 MsG0380017258.01.T01:intron 45.0%
TGAAGCAGTATTGCTTAGGC+GGG - Chr3:94162333-94162352 None:intergenic 45.0%
TGTCATCACTATTCAGGCGA+CGG + Chr3:94160387-94160406 MsG0380017258.01.T01:CDS 45.0%
TTATAGCCTGTCATGGGCTT+GGG + Chr3:94160591-94160610 MsG0380017258.01.T01:intron 45.0%
TTCCCGGGAAAGTTATTCCA+AGG - Chr3:94161226-94161245 None:intergenic 45.0%
TTTAAGGGTCTGTTTGGGAG+GGG + Chr3:94160952-94160971 MsG0380017258.01.T01:intron 45.0%
TTTATAGCCTGTCATGGGCT+TGG + Chr3:94160590-94160609 MsG0380017258.01.T01:intron 45.0%
TTTGGGTGTGTTTGGATGGA+GGG - Chr3:94161170-94161189 None:intergenic 45.0%
! AATTTGCACGCGGAGGTTTT+AGG + Chr3:94164161-94164180 MsG0380017258.01.T01:intron 45.0%
! GAGACATGAAATGGATTCCC+AGG - Chr3:94161877-94161896 None:intergenic 45.0%
! GAGGTTTCTAGAAGCCTAGA+AGG + Chr3:94160671-94160690 MsG0380017258.01.T01:intron 45.0%
! GTCTACCATCAGCAGTCTTT+TGG - Chr3:94164212-94164231 None:intergenic 45.0%
! TCATTAGTTTCCCCTTCACC+AGG - Chr3:94163356-94163375 None:intergenic 45.0%
! TCATTTGCTGGCAGTGATCA+AGG + Chr3:94164740-94164759 MsG0380017258.01.T01:CDS 45.0%
! TGTGTTTGGATGGAGGGTTT+TGG - Chr3:94161164-94161183 None:intergenic 45.0%
! TGTTGGTTGCTACACTGAAG+TGG - Chr3:94163409-94163428 None:intergenic 45.0%
! TTTCTAGAAGCCTAGAAGGG+CGG + Chr3:94160675-94160694 MsG0380017258.01.T01:intron 45.0%
! TTTTCCGGTCCTCTATTCCT+GGG + Chr3:94161857-94161876 MsG0380017258.01.T01:intron 45.0%
! TTTTCTAAGCCTGTGTGCGT+TGG + Chr3:94163330-94163349 MsG0380017258.01.T01:intron 45.0%
! TTTTTCCGGTCCTCTATTCC+TGG + Chr3:94161856-94161875 MsG0380017258.01.T01:intron 45.0%
!! ATGGTGGACACTATGCATCA+CGG - Chr3:94164022-94164041 None:intergenic 45.0%
!! CGTTGGTGGCAACTAAATTC+GGG + Chr3:94164396-94164415 MsG0380017258.01.T01:intron 45.0%
!! GGGGTAAAGTAGGGGTATTA+GGG + Chr3:94161672-94161691 MsG0380017258.01.T01:intron 45.0%
!! GGGTAAAGTAGGGGTATTAG+GGG + Chr3:94161673-94161692 MsG0380017258.01.T01:intron 45.0%
!! GGTTTGGCCTTATCATTTGC+TGG + Chr3:94164728-94164747 MsG0380017258.01.T01:CDS 45.0%
!! TGGGGTAAAGTAGGGGTATT+AGG + Chr3:94161671-94161690 MsG0380017258.01.T01:intron 45.0%
!!! TTGGATGGAGGGTTTTGGAA+GGG - Chr3:94161159-94161178 None:intergenic 45.0%
!!! TTTGGATGGAGGGTTTTGGA+AGG - Chr3:94161160-94161179 None:intergenic 45.0%
!! ATAAAAATAAAAATAAAAAC+AGG - Chr3:94164098-94164117 None:intergenic 5.0%
!! TTAATTAAAAAAAAAAAGAA+CGG - Chr3:94163562-94163581 None:intergenic 5.0%
AAATTGGAGGGGAGAACGTG+TGG + Chr3:94161651-94161670 MsG0380017258.01.T01:intron 50.0%
AATGAGTGGCCATTGAGCCA+GGG - Chr3:94162876-94162895 None:intergenic 50.0%
AATTGGAGGGGAGAACGTGT+GGG + Chr3:94161652-94161671 MsG0380017258.01.T01:intron 50.0%
AGGTCTTAGAGCCTTTCTGG+AGG + Chr3:94160761-94160780 MsG0380017258.01.T01:intron 50.0%
CATCCAAACACACCCAAAGG+GGG + Chr3:94161172-94161191 MsG0380017258.01.T01:intron 50.0%
CATTGTCGCAGTGGGAATTG+AGG + Chr3:94163844-94163863 MsG0380017258.01.T01:intron 50.0%
CCACTCATTGAATCTCCTGC+TGG + Chr3:94162887-94162906 MsG0380017258.01.T01:intron 50.0%
CCAGCAGGAGATTCAATGAG+TGG - Chr3:94162890-94162909 None:intergenic 50.0%
CCATCCAAACACACCCAAAG+GGG + Chr3:94161171-94161190 MsG0380017258.01.T01:intron 50.0%
CTCCATCCAAACACACCCAA+AGG + Chr3:94161169-94161188 MsG0380017258.01.T01:intron 50.0%
CTTTGGGTGTGTTTGGATGG+AGG - Chr3:94161171-94161190 None:intergenic 50.0%
GAACGTGTGGGGTAAAGTAG+GGG + Chr3:94161664-94161683 MsG0380017258.01.T01:intron 50.0%
GAGAACGTGTGGGGTAAAGT+AGG + Chr3:94161662-94161681 MsG0380017258.01.T01:intron 50.0%
GATGCAATACAGGCTTGTGG+AGG + Chr3:94164186-94164205 MsG0380017258.01.T01:CDS 50.0%
GATGGTAGACGATTTCGGAG+TGG + Chr3:94164222-94164241 MsG0380017258.01.T01:CDS 50.0%
GATTCCCAGGAATAGAGGAC+CGG - Chr3:94161864-94161883 None:intergenic 50.0%
GGCAAAACTGGCTACGCTAA+TGG - Chr3:94163387-94163406 None:intergenic 50.0%
GGTCTTAGAGCCTTTCTGGA+GGG + Chr3:94160762-94160781 MsG0380017258.01.T01:intron 50.0%
TAAGACCTCCAGAATGGCTC+AGG - Chr3:94160749-94160768 None:intergenic 50.0%
TATTCCAGTGAGAGAGGGGT+TGG - Chr3:94161744-94161763 None:intergenic 50.0%
TGCTTGGTTCCCAAGCAACA+GGG + Chr3:94160621-94160640 MsG0380017258.01.T01:intron 50.0%
TGGAGGGCTTCTAAGCCTTT+AGG + Chr3:94160778-94160797 MsG0380017258.01.T01:intron 50.0%
TGGAGGTCTTAGAGCCTTTC+TGG + Chr3:94160758-94160777 MsG0380017258.01.T01:intron 50.0%
TGGTAGACGATTTCGGAGTG+GGG + Chr3:94164224-94164243 MsG0380017258.01.T01:CDS 50.0%
TTGCTTGGTTCCCAAGCAAC+AGG + Chr3:94160620-94160639 MsG0380017258.01.T01:intron 50.0%
! CTTAATTTGGCTTCCCTCCC+TGG + Chr3:94162856-94162875 MsG0380017258.01.T01:intron 50.0%
! TTTTCCAACCCCTCTCTCAC+TGG + Chr3:94161737-94161756 MsG0380017258.01.T01:intron 50.0%
!! AGGCTCTAAGACCTCCAGAA+TGG - Chr3:94160755-94160774 None:intergenic 50.0%
!!! ATGGAGGGTTTTGGAAGGGA+GGG - Chr3:94161155-94161174 None:intergenic 50.0%
!!! TGTTTGGGAGGGGTTTTGGA+GGG + Chr3:94160962-94160981 MsG0380017258.01.T01:intron 50.0%
ACACCCCCTTTGGGTGTGTT+TGG - Chr3:94161178-94161197 None:intergenic 55.0%
ATTGGAGGGGAGAACGTGTG+GGG + Chr3:94161653-94161672 MsG0380017258.01.T01:intron 55.0%
CAATGAGTGGCCATTGAGCC+AGG - Chr3:94162877-94162896 None:intergenic 55.0%
CCCCTTTGGGTGTGTTTGGA+TGG - Chr3:94161174-94161193 None:intergenic 55.0%
CCTGTCATGGGCTTGGGTTT+CGG + Chr3:94160597-94160616 MsG0380017258.01.T01:intron 55.0%
GCTTGGTTCCCAAGCAACAG+GGG + Chr3:94160622-94160641 MsG0380017258.01.T01:intron 55.0%
GGAGGCCAAAAGACTGCTGA+TGG + Chr3:94164204-94164223 MsG0380017258.01.T01:CDS 55.0%
GGCTTAGAAGCCCTCCAGAA+AGG - Chr3:94160775-94160794 None:intergenic 55.0%
GGTAGACGATTTCGGAGTGG+GGG + Chr3:94164225-94164244 MsG0380017258.01.T01:CDS 55.0%
TCAGGCGACGGTGCAATTCA+AGG + Chr3:94160399-94160418 MsG0380017258.01.T01:CDS 55.0%
TTGGAGGGGAGGACTTTGGA+GGG + Chr3:94160977-94160996 MsG0380017258.01.T01:intron 55.0%
TTTGGAGGGGAGGACTTTGG+AGG + Chr3:94160976-94160995 MsG0380017258.01.T01:intron 55.0%
! GGTCTGTTTGGGAGGGGTTT+TGG + Chr3:94160958-94160977 MsG0380017258.01.T01:intron 55.0%
! GTTTTACCGGTCCCCACAGA+CGG + Chr3:94160470-94160489 MsG0380017258.01.T01:CDS 55.0%
! TACACTGCTGCGGGTTGTCT+TGG + Chr3:94162153-94162172 MsG0380017258.01.T01:CDS 55.0%
! TGCGATTCAAAGGTGTGGCC+CGG + Chr3:94160443-94160462 MsG0380017258.01.T01:CDS 55.0%
!! CTGTTTGGGAGGGGTTTTGG+AGG + Chr3:94160961-94160980 MsG0380017258.01.T01:intron 55.0%
!!! GATGGAGGGTTTTGGAAGGG+AGG - Chr3:94161156-94161175 None:intergenic 55.0%
!!! GGTTTTGGAGGGGAGGACTT+TGG + Chr3:94160973-94160992 MsG0380017258.01.T01:intron 55.0%
!!! GTTTGGGAGGGGTTTTGGAG+GGG + Chr3:94160963-94160982 MsG0380017258.01.T01:intron 55.0%
!!! TGGAGGGTTTTGGAAGGGAG+GGG - Chr3:94161154-94161173 None:intergenic 55.0%
AGACGATTTCGGAGTGGGGG+TGG + Chr3:94164228-94164247 MsG0380017258.01.T01:CDS 60.0%
AGTACAGTTGGCGCCGTCTG+TGG - Chr3:94160486-94160505 None:intergenic 60.0%
AGTCTCAGGAGCCCTTCTGG+AGG + Chr3:94160720-94160739 MsG0380017258.01.T01:intron 60.0%
AGTGGCCATTGAGCCAGGGA+GGG - Chr3:94162872-94162891 None:intergenic 60.0%
CAGAAGGGCTCCTGAGACTC+TGG - Chr3:94160719-94160738 None:intergenic 60.0%
CAGAGTCTCAGGAGCCCTTC+TGG + Chr3:94160717-94160736 MsG0380017258.01.T01:intron 60.0%
CCGAAACCCAAGCCCATGAC+AGG - Chr3:94160600-94160619 None:intergenic 60.0%
GGGACCGGTAAAACTGACCC+GGG - Chr3:94160464-94160483 None:intergenic 60.0%
GGGCTTGGGTTTCGGTTGCT+TGG + Chr3:94160605-94160624 MsG0380017258.01.T01:intron 60.0%
GGGGACCGGTAAAACTGACC+CGG - Chr3:94160465-94160484 None:intergenic 60.0%
GTACAGTTGGCGCCGTCTGT+GGG - Chr3:94160485-94160504 None:intergenic 60.0%
GTCTCAGGAGCCCTTCTGGA+GGG + Chr3:94160721-94160740 MsG0380017258.01.T01:intron 60.0%
TACAGTTGGCGCCGTCTGTG+GGG - Chr3:94160484-94160503 None:intergenic 60.0%
TTCACCAGGCCAACGCACAC+AGG - Chr3:94163342-94163361 None:intergenic 60.0%
! GCGATTCAAAGGTGTGGCCC+GGG + Chr3:94160444-94160463 MsG0380017258.01.T01:CDS 60.0%
! GTGGCCCGGGTCAGTTTTAC+CGG + Chr3:94160457-94160476 MsG0380017258.01.T01:CDS 60.0%
! GTGTGCGTTGGCCTGGTGAA+GGG + Chr3:94163342-94163361 MsG0380017258.01.T01:intron 60.0%
! TAAGCCTGTGTGCGTTGGCC+TGG + Chr3:94163335-94163354 MsG0380017258.01.T01:intron 60.0%
! TGTGCGTTGGCCTGGTGAAG+GGG + Chr3:94163343-94163362 MsG0380017258.01.T01:intron 60.0%
! TGTGTGCGTTGGCCTGGTGA+AGG + Chr3:94163341-94163360 MsG0380017258.01.T01:intron 60.0%
!!! AGGGTTTTGGAAGGGAGGGG+AGG - Chr3:94161151-94161170 None:intergenic 60.0%
!!! GGGTTTTGGAAGGGAGGGGA+GGG - Chr3:94161150-94161169 None:intergenic 60.0%
CCTAGAAGGGCGGTGCCTCA+AGG + Chr3:94160685-94160704 MsG0380017258.01.T01:intron 65.0%
GAGTGGCCATTGAGCCAGGG+AGG - Chr3:94162873-94162892 None:intergenic 65.0%
GGAGTGGGGGTGGCATACTG+TGG + Chr3:94164238-94164257 MsG0380017258.01.T01:CDS 65.0%
GGCTTCCCTCCCTGGCTCAA+TGG + Chr3:94162864-94162883 MsG0380017258.01.T01:intron 65.0%
!! CCTTGAGGCACCGCCCTTCT+AGG - Chr3:94160688-94160707 None:intergenic 65.0%
!!! TGGGAGGGGTTTTGGAGGGG+AGG + Chr3:94160966-94160985 MsG0380017258.01.T01:intron 65.0%
ACTCTGGCGCGCTCGCCTTG+AGG - Chr3:94160703-94160722 None:intergenic 70.0%
GGCTCAGGCGCCCTCCAGAA+GGG - Chr3:94160734-94160753 None:intergenic 70.0%
GGGCGCCTGAGCCATTCTGG+AGG + Chr3:94160741-94160760 MsG0380017258.01.T01:intron 70.0%
TGGCTCAGGCGCCCTCCAGA+AGG - Chr3:94160735-94160754 None:intergenic 70.0%
TTGGCGCCGTCTGTGGGGAC+CGG - Chr3:94160479-94160498 None:intergenic 70.0%
!! GGAGGGCGCCTGAGCCATTC+TGG + Chr3:94160738-94160757 MsG0380017258.01.T01:intron 70.0%
GGCGAGCGCGCCAGAGTCTC+AGG + Chr3:94160706-94160725 MsG0380017258.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 94160363 94164922 94160363 ID=MsG0380017258.01;Name=MsG0380017258.01
Chr3 mRNA 94160363 94164922 94160363 ID=MsG0380017258.01.T01;Parent=MsG0380017258.01;Name=MsG0380017258.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.8|0.75|0.8|5|0|187
Chr3 exon 94160363 94160519 94160363 ID=MsG0380017258.01.T01:exon:26890;Parent=MsG0380017258.01.T01
Chr3 exon 94162112 94162206 94162112 ID=MsG0380017258.01.T01:exon:26891;Parent=MsG0380017258.01.T01
Chr3 exon 94164183 94164326 94164183 ID=MsG0380017258.01.T01:exon:26892;Parent=MsG0380017258.01.T01
Chr3 exon 94164666 94164766 94164666 ID=MsG0380017258.01.T01:exon:26893;Parent=MsG0380017258.01.T01
Chr3 exon 94164856 94164922 94164856 ID=MsG0380017258.01.T01:exon:26894;Parent=MsG0380017258.01.T01
Chr3 CDS 94160363 94160519 94160363 ID=MsG0380017258.01.T01:cds;Parent=MsG0380017258.01.T01
Chr3 CDS 94162112 94162206 94162112 ID=MsG0380017258.01.T01:cds;Parent=MsG0380017258.01.T01
Chr3 CDS 94164183 94164326 94164183 ID=MsG0380017258.01.T01:cds;Parent=MsG0380017258.01.T01
Chr3 CDS 94164666 94164766 94164666 ID=MsG0380017258.01.T01:cds;Parent=MsG0380017258.01.T01
Chr3 CDS 94164856 94164922 94164856 ID=MsG0380017258.01.T01:cds;Parent=MsG0380017258.01.T01
Gene Sequence

>MsG0380017258.01.T01

ATGCTAAGGTCAGAGATGGATATTTGTCATCACTATTCAGGCGACGGTGCAATTCAAGGAATAGGGTTTGTGTTCACGATTGCGATTCAAAGGTGTGGCCCGGGTCAGTTTTACCGGTCCCCACAGACGGCGCCAACTGTACTTGCAGAAAAGTACGATACCTGTCGTCATCTGAAAGAGAAAAAGTCATATATGGTATACACTGCTGCGGGTTGTCTTGGAATGTTTGCATTAAGTGATATCATCAAAGAGGTTGATGCAATACAGGCTTGTGGAGGCCAAAAGACTGCTGATGGTAGACGATTTCGGAGTGGGGGTGGCATACTGTGGAACATCATAAAGGTTCGGGAACCAAAGACCTACAAAGAGATAATGAAAAGAGCAAAAGAGTTTGAGAAGCAATTCAGGCAGCCAAATGTTAAACAACTAAATACGCCAAAGAAAGATGATTTTCTCAAGGTTTGGCCTTATCATTTGCTGGCAGTGATCAAGGAAATGTTAAGGATACCTGTTTCCTATGATGATGATCTACTTGGAAATAATCCAGTCAATGATGCAACATGA

Protein sequence

>MsG0380017258.01.T01

MLRSEMDICHHYSGDGAIQGIGFVFTIAIQRCGPGQFYRSPQTAPTVLAEKYDTCRHLKEKKSYMVYTAAGCLGMFALSDIIKEVDAIQACGGQKTADGRRFRSGGGILWNIIKVREPKTYKEIMKRAKEFEKQFRQPNVKQLNTPKKDDFLKVWPYHLLAVIKEMLRIPVSYDDDLLGNNPVNDAT*