AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001904.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001904.01.T01 MTR_1g046210 96.767 433 14 0 1 433 1 433 0.0 888
MsG0180001904.01.T01 MTR_1g046340 55.455 330 100 5 443 745 26 335 1.68e-92 292
MsG0180001904.01.T01 MTR_1g046200 94.382 89 5 0 442 530 22 110 2.93e-48 173
MsG0180001904.01.T01 MTR_3g088515 51.101 227 92 5 443 666 37 247 1.67e-41 152
MsG0180001904.01.T01 MTR_1g046320 81.609 87 16 0 443 529 26 112 3.38e-40 151
MsG0180001904.01.T01 MTR_1g021435 26.531 147 104 2 443 587 38 182 1.00e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001904.01.T01 AT2G05320 65.581 430 143 2 4 432 5 430 0.0 604
MsG0180001904.01.T01 AT3G06160 22.549 306 211 6 443 743 25 309 5.03e-15 77.4
MsG0180001904.01.T01 AT3G06160 22.549 306 211 6 443 743 25 309 5.03e-15 77.4
MsG0180001904.01.T01 AT3G06160 22.549 306 211 6 443 743 25 309 5.03e-15 77.4
MsG0180001904.01.T01 AT3G06160 22.549 306 211 6 443 743 40 324 5.69e-15 77.4
MsG0180001904.01.T01 AT3G06160 22.549 306 211 6 443 743 84 368 1.51e-14 76.6

Find 166 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGCATCTTTACCAATATT+TGG 0.160032 1:+29064742 None:intergenic
GTTTCTTTGATGATTATAAT+TGG 0.161902 1:-29064087 MsG0180001904.01.T01:CDS
TGCAATGAAGTGTGGATTTC+CGG 0.187944 1:+29057305 None:intergenic
TTTGTTGCCACCAAGGAATT+TGG 0.239817 1:-29064773 MsG0180001904.01.T01:CDS
TTGGATTTGTATCCAAATAT+TGG 0.255178 1:-29064754 MsG0180001904.01.T01:CDS
GGTTATAAAGCCGGGTTTAA+AGG 0.263690 1:-29063836 MsG0180001904.01.T01:CDS
GAAACCCCTGGAAAACTATT+TGG 0.268125 1:+29064520 None:intergenic
GTTTAAAGGTTGGGGAGGTT+GGG 0.274547 1:-29063822 MsG0180001904.01.T01:CDS
AGTGAGACGGGAGTGCATTC+TGG 0.286178 1:-29064352 MsG0180001904.01.T01:CDS
GGTTTAAAGGTTGGGGAGGT+TGG 0.289854 1:-29063823 MsG0180001904.01.T01:CDS
TTTAAAGGTTGGGGAGGTTG+GGG 0.302739 1:-29063821 MsG0180001904.01.T01:CDS
ATAAGATCATTGGTGGTATT+AGG 0.307860 1:-29064591 MsG0180001904.01.T01:CDS
TGTTAAGGGTGCACATTGTT+AGG 0.310846 1:-29056610 MsG0180001904.01.T01:CDS
TAGAGGGGAAAATTCTTTAG+AGG 0.319546 1:-29057887 MsG0180001904.01.T01:CDS
GAAACCACGTCTTAGAGATT+TGG 0.321204 1:-29065007 MsG0180001904.01.T01:CDS
TGCTGCTGATGATGATATTA+TGG 0.325258 1:-29057665 MsG0180001904.01.T01:CDS
GCATCAATTTCGTCGTCTTC+AGG 0.326868 1:+29057345 None:intergenic
CTTACCAGCTTTGCACTTGC+AGG 0.327904 1:+29057504 None:intergenic
CTTCAAATCGCGACGATAAC+CGG 0.329379 1:+29064858 None:intergenic
TGGGAAATGTGGTTTGCATC+AGG 0.335039 1:-29063978 MsG0180001904.01.T01:CDS
GAGAGTCTTGCTAAGGTTGT+AGG 0.341297 1:-29064667 MsG0180001904.01.T01:CDS
AAGAATTGTACCAATTCATT+AGG 0.342988 1:+29057264 None:intergenic
AGATCATGATGATGATATTA+TGG 0.349539 1:-29057632 MsG0180001904.01.T01:CDS
ATGTGGTTTGCATCAGGGTC+AGG 0.352273 1:-29063972 MsG0180001904.01.T01:CDS
ATCAAGTTCACAAAAGCATT+AGG 0.355825 1:+29058030 None:intergenic
TGAACTTGATGCGTTCAAAA+AGG 0.358189 1:-29058017 MsG0180001904.01.T01:CDS
CAAGGGAGATACAGTGCCTT+TGG 0.365705 1:+29063745 None:intergenic
TAAAGCCGGGTTTAAAGGTT+GGG 0.368431 1:-29063831 MsG0180001904.01.T01:CDS
GGACTAGTGCTGTTCACTTT+GGG 0.377896 1:-29063997 MsG0180001904.01.T01:CDS
CTCTTCCTCTACGATCTCTT+AGG 0.380260 1:+29057974 None:intergenic
TTTCTTTGATGATTATAATT+GGG 0.381332 1:-29064086 MsG0180001904.01.T01:CDS
TTAAAGGTTGGGGAGGTTGG+GGG 0.381860 1:-29063820 MsG0180001904.01.T01:CDS
GAAAGGGTTGATGATGGTTC+CGG 0.383637 1:-29064877 MsG0180001904.01.T01:CDS
TAAAGGTTGGGGAGGTTGGG+GGG 0.398412 1:-29063819 MsG0180001904.01.T01:CDS
TTGAAACTAATGATTTAGAA+AGG 0.399269 1:-29064894 MsG0180001904.01.T01:CDS
GAAGGGAATCCTGATCAGTA+TGG 0.399926 1:-29064451 MsG0180001904.01.T01:CDS
TAACAATCAGGACATTTCAT+AGG 0.402646 1:+29064250 None:intergenic
TTTCGAACATTGATTCAGAT+TGG 0.406173 1:-29063886 MsG0180001904.01.T01:CDS
TTGTACCAATTCATTAGGTC+TGG 0.410085 1:+29057269 None:intergenic
GCAATGAAGTGTGGATTTCC+GGG 0.417877 1:+29057306 None:intergenic
ATATGTGTTGTGCTTATTTG+TGG 0.421461 1:+29056776 None:intergenic
ATATTGAAAACAACATATTC+AGG 0.423216 1:-29057840 MsG0180001904.01.T01:CDS
TTCGAACATTGATTCAGATT+GGG 0.423391 1:-29063885 MsG0180001904.01.T01:CDS
GCGACTGTTTATCCCTCATT+TGG 0.423496 1:-29064049 MsG0180001904.01.T01:CDS
GTGGTGTTTCTTACTTTATG+TGG 0.425344 1:-29064964 MsG0180001904.01.T01:CDS
TAGTTTAGTTGCGGAGAGAA+TGG 0.426139 1:-29064176 MsG0180001904.01.T01:CDS
TCAAGTTCACAAAAGCATTA+GGG 0.428525 1:+29058031 None:intergenic
AGTTTAGTTGCGGAGAGAAT+GGG 0.429923 1:-29064175 MsG0180001904.01.T01:CDS
TCATTCCAGACCTAATGAAT+TGG 0.430343 1:-29057274 MsG0180001904.01.T01:intron
AGGACTAGTGCTGTTCACTT+TGG 0.433822 1:-29063998 MsG0180001904.01.T01:CDS
GGATACAAATCCAAATTCCT+TGG 0.434662 1:+29064763 None:intergenic
GATGGCTGGAAGCAATTTAG+AGG 0.442063 1:-29057904 MsG0180001904.01.T01:CDS
GGTTTCGGTTGGTGATTGTA+AGG 0.442783 1:-29064503 MsG0180001904.01.T01:CDS
TGTAAATTCCGATACGCATT+GGG 0.445185 1:+29064292 None:intergenic
CATGGAGGAAAATAACAATA+TGG 0.446533 1:-29057767 MsG0180001904.01.T01:CDS
CTGTAAATTCCGATACGCAT+TGG 0.446904 1:+29064291 None:intergenic
CATCTCTCCACGTACGTACT+TGG 0.449196 1:+29056741 None:intergenic
GGAAACAAATGAGGCGAATA+CGG 0.449799 1:+29064541 None:intergenic
GAGGAAATGAATAAGATCAT+TGG 0.454084 1:-29064601 MsG0180001904.01.T01:CDS
ACTCGTTTAATCGAACGGTT+TGG 0.455219 1:-29064141 MsG0180001904.01.T01:CDS
CATGTCAAAGCTCGTCGTAT+TGG 0.455772 1:-29057946 MsG0180001904.01.T01:CDS
TGGGATGGATTGAGTGAGAC+GGG 0.456724 1:-29064364 MsG0180001904.01.T01:CDS
GTGAGACGGGAGTGCATTCT+GGG 0.461982 1:-29064351 MsG0180001904.01.T01:CDS
TAGTCATGATGGTTACTTTG+AGG 0.463724 1:-29064620 MsG0180001904.01.T01:CDS
TTGCTGATTGTTAGTCATGA+TGG 0.465335 1:-29064631 MsG0180001904.01.T01:CDS
CGATGGTTCCCATACTGATC+AGG 0.468360 1:+29064442 None:intergenic
TAACCGGCCGCAGTATCTTA+AGG 0.468443 1:-29064698 MsG0180001904.01.T01:CDS
ATCAGCCTGGTTATAAAGCC+GGG 0.475227 1:-29063844 MsG0180001904.01.T01:CDS
AGTGAACAGCACTAGTCCTT+GGG 0.478854 1:+29064002 None:intergenic
GATGGTCGAGTACGTGTGCT+AGG 0.481978 1:-29056722 MsG0180001904.01.T01:CDS
AGAGTCTTGCTAAGGTTGTA+GGG 0.482406 1:-29064666 MsG0180001904.01.T01:CDS
TTGTGGCAAGATGTGATGAT+AGG 0.486090 1:+29056793 None:intergenic
GAGATCGTAGAGGAAGAGAT+TGG 0.486399 1:-29057969 MsG0180001904.01.T01:CDS
TGAAACTAATGATTTAGAAA+GGG 0.487518 1:-29064893 MsG0180001904.01.T01:CDS
CAATATGGAGGATGAGGAAG+AGG 0.500994 1:-29057752 MsG0180001904.01.T01:CDS
AAGTGAACAGCACTAGTCCT+TGG 0.502432 1:+29064001 None:intergenic
GTCGAGTACGTGTGCTAGGG+TGG 0.503803 1:-29056718 MsG0180001904.01.T01:CDS
TGCTTCAACGACACAATCTT+CGG 0.503961 1:+29064415 None:intergenic
AGAACCTGCAAGTGCAAAGC+TGG 0.504053 1:-29057508 MsG0180001904.01.T01:intron
TCGTGTAGAAGATCATGATA+AGG 0.504261 1:-29063909 MsG0180001904.01.T01:CDS
AAATAACAATATGGAGGATG+AGG 0.505646 1:-29057758 MsG0180001904.01.T01:CDS
AAATTTGCAGCATAACAATC+AGG 0.508654 1:+29064238 None:intergenic
AATCAGCCTGGTTATAAAGC+CGG 0.509207 1:-29063845 MsG0180001904.01.T01:CDS
GGGAAATGTGGTTTGCATCA+GGG 0.510464 1:-29063977 MsG0180001904.01.T01:CDS
GATTTAGAAAGGGTTGATGA+TGG 0.515891 1:-29064883 MsG0180001904.01.T01:CDS
CGGCAAAGCTCAAGCATAAG+TGG 0.517983 1:+29063783 None:intergenic
TGTGGTTTGCATCAGGGTCA+GGG 0.518341 1:-29063971 MsG0180001904.01.T01:CDS
ATCAATGTGTGAAAAGAAGA+AGG 0.520397 1:-29057797 MsG0180001904.01.T01:CDS
TTGTGTCGTTGAAGCATCAT+TGG 0.520834 1:-29064408 MsG0180001904.01.T01:CDS
AGGGGAAAATTCTTTAGAGG+AGG 0.523950 1:-29057884 MsG0180001904.01.T01:CDS
ATAAAGCCGGGTTTAAAGGT+TGG 0.530281 1:-29063832 MsG0180001904.01.T01:CDS
CAATCACCAACCGAAACCCC+TGG 0.531735 1:+29064508 None:intergenic
AAAGCCGGGTTTAAAGGTTG+GGG 0.534299 1:-29063830 MsG0180001904.01.T01:CDS
GCTGTTCACTTTGGGAAATG+TGG 0.541333 1:-29063989 MsG0180001904.01.T01:CDS
ACAAATCACTCTGCTGTGGA+AGG 0.550303 1:+29064818 None:intergenic
CGTTGAAGCATCATTGGTGG+TGG 0.550314 1:-29064402 MsG0180001904.01.T01:CDS
AAGGGTGCACATTGTTAGGA+AGG 0.552584 1:-29056606 MsG0180001904.01.T01:CDS
GATGAGGAAGAGGACGGTGA+TGG 0.556360 1:-29057742 MsG0180001904.01.T01:CDS
GGGAGATACAGTGCCTTTGG+AGG 0.556951 1:+29063748 None:intergenic
AGTTGAATTTGTTGCCACCA+AGG 0.557616 1:-29064780 MsG0180001904.01.T01:CDS
GTGGTTTGCATCAGGGTCAG+GGG 0.558079 1:-29063970 MsG0180001904.01.T01:CDS
CGAGAATGAAAGAATGTACA+AGG 0.558420 1:-29057560 MsG0180001904.01.T01:CDS
TTAAACCCGGCTTTATAACC+AGG 0.558447 1:+29063839 None:intergenic
GGTTGTTGAGAGTCTTGCTA+AGG 0.559730 1:-29064674 MsG0180001904.01.T01:CDS
TTATATTTCCCAATGCGTAT+CGG 0.560807 1:-29064300 MsG0180001904.01.T01:CDS
TACAAATCCAAATTCCTTGG+TGG 0.561392 1:+29064766 None:intergenic
AAACTATTTGGAAACAAATG+AGG 0.561848 1:+29064532 None:intergenic
AATAAGGCTTGCATTGATAA+CGG 0.564891 1:-29063944 MsG0180001904.01.T01:CDS
TGATGATGATATTATGGCAG+AGG 0.566025 1:-29057626 MsG0180001904.01.T01:CDS
GTACACAGGTCTACCAAATG+AGG 0.572927 1:+29064036 None:intergenic
AGGTTACTCGTTTAATCGAA+CGG 0.577224 1:-29064146 MsG0180001904.01.T01:CDS
GAGATTGTGCTGCGTGAAGA+TGG 0.578226 1:-29056644 MsG0180001904.01.T01:CDS
GAAATGAATAAGATCATTGG+TGG 0.579179 1:-29064598 MsG0180001904.01.T01:CDS
GCGGAGAGAATGGGAAACAT+AGG 0.580513 1:-29064166 MsG0180001904.01.T01:CDS
GCCGGGTTTAAAGGTTGGGG+AGG 0.581968 1:-29063827 MsG0180001904.01.T01:CDS
CAAGTACGTACGTGGAGAGA+TGG 0.582116 1:-29056740 MsG0180001904.01.T01:CDS
TTCGACAAATCACTCTGCTG+TGG 0.582757 1:+29064814 None:intergenic
GTGGATGATGAATACGGTGT+GGG 0.585306 1:-29064383 MsG0180001904.01.T01:CDS
GACATGTATCGCTCCTCCAA+AGG 0.585930 1:-29063761 MsG0180001904.01.T01:CDS
AAGGGAATCCTGATCAGTAT+GGG 0.587521 1:-29064450 MsG0180001904.01.T01:CDS
ATGATGAATACGGTGTGGGA+TGG 0.587798 1:-29064379 MsG0180001904.01.T01:CDS
CGAAAGAGAAGCATTGTGAA+GGG 0.594406 1:-29064468 MsG0180001904.01.T01:CDS
TTTGCGTCGTTTATTATCTG+TGG 0.594905 1:-29064983 MsG0180001904.01.T01:CDS
TGTCGTTGAAGCATCATTGG+TGG 0.597927 1:-29064405 MsG0180001904.01.T01:CDS
GCGAAAGAGAAGCATTGTGA+AGG 0.598171 1:-29064469 MsG0180001904.01.T01:CDS
ACGCATTGGGAAATATAAAG+TGG 0.599578 1:+29064305 None:intergenic
ACCTCCCCAACCTTTAAACC+CGG 0.600678 1:+29063826 None:intergenic
AAAGAAGAAGGTAAGTGACA+TGG 0.601455 1:-29057785 MsG0180001904.01.T01:CDS
TGAACTCGAGAGGTGAAGAG+TGG 0.605955 1:-29064201 MsG0180001904.01.T01:CDS
GAAGAAGGTAAGTGACATGG+AGG 0.606864 1:-29057782 MsG0180001904.01.T01:CDS
ATGGCTGGAAGCAATTTAGA+GGG 0.607200 1:-29057903 MsG0180001904.01.T01:CDS
TAATTGGGATATCACTATGT+GGG 0.611867 1:-29064071 MsG0180001904.01.T01:CDS
CATGATACCGATGATGATGA+TGG 0.612164 1:-29057595 MsG0180001904.01.T01:CDS
GTGGGATGGATTGAGTGAGA+CGG 0.612504 1:-29064365 MsG0180001904.01.T01:CDS
ATAATTGGGATATCACTATG+TGG 0.612789 1:-29064072 MsG0180001904.01.T01:CDS
AGAGTGGGATAGTTTAGTTG+CGG 0.613905 1:-29064185 MsG0180001904.01.T01:CDS
ATGGTCGAGTACGTGTGCTA+GGG 0.616130 1:-29056721 MsG0180001904.01.T01:CDS
CCTCTCGAGTTCACATCAGA+AGG 0.618268 1:+29064211 None:intergenic
GAACTCGAGAGGTGAAGAGT+GGG 0.621084 1:-29064200 MsG0180001904.01.T01:CDS
CCTTCTGATGTGAACTCGAG+AGG 0.621406 1:-29064211 MsG0180001904.01.T01:CDS
TGGTTTGCATCAGGGTCAGG+GGG 0.622031 1:-29063969 MsG0180001904.01.T01:CDS
TCGAGTACGTGTGCTAGGGT+GGG 0.622095 1:-29056717 MsG0180001904.01.T01:CDS
GTCATCACCATCATCATCAT+CGG 0.626181 1:+29057588 None:intergenic
TGATGATGATATTATGGCAG+AGG 0.627493 1:-29057659 MsG0180001904.01.T01:CDS
ACACAATCTTCGGCAAACGA+TGG 0.630908 1:+29064425 None:intergenic
CCACCTTAAGATACTGCGGC+CGG 0.633502 1:+29064695 None:intergenic
GGCTTGCATTGATAACGGCA+TGG 0.633628 1:-29063939 MsG0180001904.01.T01:CDS
AGACCTGTGTACACGTTACG+AGG 0.633777 1:-29064025 MsG0180001904.01.T01:CDS
GGAGGAAAATAACAATATGG+AGG 0.639547 1:-29057764 MsG0180001904.01.T01:CDS
AGAGAGGCCAAGTACGTACG+TGG 0.642453 1:-29056748 MsG0180001904.01.T01:CDS
TTGGTGGTGGATGATGAATA+CGG 0.650160 1:-29064389 MsG0180001904.01.T01:CDS
GCTGAAATGTATATTCAACC+CGG 0.655563 1:-29057324 MsG0180001904.01.T01:CDS
ATGGAGGATGAGGAAGAGGA+CGG 0.656729 1:-29057748 MsG0180001904.01.T01:CDS
TTTGGAGGAGCGATACATGT+CGG 0.658581 1:+29063763 None:intergenic
TACACAGGTCTACCAAATGA+GGG 0.661524 1:+29064037 None:intergenic
TGTACACGTTACGAGGCCCA+AGG 0.664181 1:-29064018 MsG0180001904.01.T01:CDS
GGTGGATGATGAATACGGTG+TGG 0.666533 1:-29064384 MsG0180001904.01.T01:CDS
ACAACACATATCGAAAAGAG+AGG 0.679363 1:-29056764 MsG0180001904.01.T01:CDS
ACAACCACCTTAAGATACTG+CGG 0.681044 1:+29064691 None:intergenic
CCGGCCGCAGTATCTTAAGG+TGG 0.691625 1:-29064695 MsG0180001904.01.T01:CDS
GGGCCTCGTAACGTGTACAC+AGG 0.697516 1:+29064022 None:intergenic
CAAAGCTCAAGCATAAGTGG+CGG 0.706570 1:+29063786 None:intergenic
TGGCTGGAAGCAATTTAGAG+GGG 0.710633 1:-29057902 MsG0180001904.01.T01:CDS
AAAGCCAAATCTCTAAGACG+TGG 0.718926 1:+29065003 None:intergenic
TGATGATGATGACGATGACG+AGG 0.734080 1:-29057716 MsG0180001904.01.T01:CDS
TTTATCCTAAGAGATCGTAG+AGG 0.735718 1:-29057979 MsG0180001904.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATAATTAATTAATTA+TGG + Chr1:29062439-29062458 None:intergenic 0.0%
!!! ACTTGTTTTTATTTTTAATT+TGG - Chr1:29057932-29057951 MsG0180001904.01.T01:CDS 10.0%
!!! AGTTTTTTTTTTTTTTTTTG+AGG - Chr1:29061185-29061204 MsG0180001904.01.T01:intron 10.0%
!!! ATAAATACAATTTTAGTTTT+TGG - Chr1:29061473-29061492 MsG0180001904.01.T01:intron 10.0%
!!! ATGATATTTTCATTTATTTT+AGG - Chr1:29060506-29060525 MsG0180001904.01.T01:intron 10.0%
!!! GTTTTTTTTTTTTTTTTTGA+GGG - Chr1:29061186-29061205 MsG0180001904.01.T01:intron 10.0%
!!! TGATATTTTCATTTATTTTA+GGG - Chr1:29060507-29060526 MsG0180001904.01.T01:intron 10.0%
!!! TTAAAGATTTGTTATTTTTA+GGG + Chr1:29061559-29061578 None:intergenic 10.0%
!!! TTTAAAGATTTGTTATTTTT+AGG + Chr1:29061560-29061579 None:intergenic 10.0%
!!! TTTTTTTTTTATTTTTATGC+AGG - Chr1:29060805-29060824 MsG0180001904.01.T01:intron 10.0%
!! AAACAAGCAATTAATTATTA+AGG - Chr1:29062703-29062722 MsG0180001904.01.T01:intron 15.0%
!! AAATAATAATGACATAAATG+TGG - Chr1:29062609-29062628 MsG0180001904.01.T01:intron 15.0%
!! ACAGAACAAAAAAAAAAAAA+AGG + Chr1:29062852-29062871 None:intergenic 15.0%
!! ATATAAATATGTTTCATGAA+AGG - Chr1:29059502-29059521 MsG0180001904.01.T01:intron 15.0%
!! ATGTCAAAAAAAAAAAGTAA+TGG + Chr1:29064389-29064408 None:intergenic 15.0%
!! ATTATTGCTTGATTAATTTA+GGG + Chr1:29062381-29062400 None:intergenic 15.0%
!! CAGAACAAAAAAAAAAAAAA+GGG + Chr1:29062851-29062870 None:intergenic 15.0%
!! CATATTTATAAGTTAAGAAA+AGG + Chr1:29062325-29062344 None:intergenic 15.0%
!! TAAGAAAATAGAATTATGTT+AGG + Chr1:29060390-29060409 None:intergenic 15.0%
!! TGTAAAAAGAATTAAACTAT+TGG - Chr1:29062253-29062272 MsG0180001904.01.T01:intron 15.0%
!! TTTAGAAAACATAAAACATA+AGG + Chr1:29058508-29058527 None:intergenic 15.0%
!!! AATCTAAAATGTATACAAAT+TGG + Chr1:29061904-29061923 None:intergenic 15.0%
!!! AGTTTTGCAAAATAATTTTA+AGG - Chr1:29063196-29063215 MsG0180001904.01.T01:intron 15.0%
!!! ATTACTTTTTTTTTTTGACA+TGG - Chr1:29064388-29064407 MsG0180001904.01.T01:CDS 15.0%
!!! ATTTGATATAGGTTTTTTTA+GGG - Chr1:29062890-29062909 MsG0180001904.01.T01:intron 15.0%
!!! ATTTTGAATAATGAAGAAAA+TGG - Chr1:29060542-29060561 MsG0180001904.01.T01:intron 15.0%
!!! CATTATTATTTTTCTGTTTA+TGG + Chr1:29062600-29062619 None:intergenic 15.0%
!!! GGATAAATTTTAAAAAAAGA+AGG + Chr1:29061441-29061460 None:intergenic 15.0%
!!! TAAAGATTTGTTATTTTTAG+GGG + Chr1:29061558-29061577 None:intergenic 15.0%
!!! TATTTTGTATGATTTGATAT+AGG - Chr1:29062879-29062898 MsG0180001904.01.T01:intron 15.0%
!!! TGTATTTATGTTTTAATAGA+AGG + Chr1:29061462-29061481 None:intergenic 15.0%
!!! TTGATATTGATATTTTTACT+TGG - Chr1:29056685-29056704 MsG0180001904.01.T01:CDS 15.0%
!!! TTTCTTTGATGATTATAATT+GGG - Chr1:29057536-29057555 MsG0180001904.01.T01:CDS 15.0%
!!! TTTTTTTAGCATTTTCAATT+TGG - Chr1:29059998-29060017 MsG0180001904.01.T01:intron 15.0%
!! AAATGAATCAAATTGAGTTA+TGG - Chr1:29062412-29062431 MsG0180001904.01.T01:intron 20.0%
!! ACATGAATTTACTTTACAAA+CGG - Chr1:29057983-29058002 MsG0180001904.01.T01:CDS 20.0%
!! ACATTAAACTATGAATATGA+AGG + Chr1:29060722-29060741 None:intergenic 20.0%
!! ATATTGAAAACAACATATTC+AGG - Chr1:29063782-29063801 MsG0180001904.01.T01:CDS 20.0%
!! ATGAAAAACTTAAGTTATTC+CGG + Chr1:29060414-29060433 None:intergenic 20.0%
!! ATGAAATATATTACCAACAA+CGG - Chr1:29060584-29060603 MsG0180001904.01.T01:intron 20.0%
!! ATGAATCAGTATATATACAA+AGG + Chr1:29063169-29063188 None:intergenic 20.0%
!! ATTAGAAATTCGAGATTATT+AGG + Chr1:29060207-29060226 None:intergenic 20.0%
!! CATAAATAACACCATTAAAT+CGG + Chr1:29063019-29063038 None:intergenic 20.0%
!! GATTATTGCTTGATTAATTT+AGG + Chr1:29062382-29062401 None:intergenic 20.0%
!! GTCATAAGTAGAAATTTAAA+TGG - Chr1:29062652-29062671 MsG0180001904.01.T01:intron 20.0%
!! GTGTACTATAATTTGAATAT+TGG - Chr1:29063310-29063329 MsG0180001904.01.T01:intron 20.0%
!! GTTAACTATCAAATTAACTA+TGG + Chr1:29058018-29058037 None:intergenic 20.0%
!! TAATCAAATGATTGATGAAT+AGG - Chr1:29058945-29058964 MsG0180001904.01.T01:intron 20.0%
!! TAGTTTAATGTTCAAATTAC+AGG - Chr1:29060731-29060750 MsG0180001904.01.T01:intron 20.0%
!! TATAAATATGAATGTGAAAG+AGG - Chr1:29062335-29062354 MsG0180001904.01.T01:intron 20.0%
!! TCATAATAGTGAAAAATGAA+AGG + Chr1:29064709-29064728 None:intergenic 20.0%
!! TGAAACTAATGATTTAGAAA+GGG - Chr1:29056729-29056748 MsG0180001904.01.T01:CDS 20.0%
!! TTCATCAATCATTTGATTAT+TGG + Chr1:29058944-29058963 None:intergenic 20.0%
!! TTGAAACTAATGATTTAGAA+AGG - Chr1:29056728-29056747 MsG0180001904.01.T01:CDS 20.0%
!! TTGGAAAAAAATACACAATA+AGG - Chr1:29057500-29057519 MsG0180001904.01.T01:intron 20.0%
!! TTTCAATATGTGTAAAAACA+AGG + Chr1:29063771-29063790 None:intergenic 20.0%
!!! ACTCACTTTTTTCTATATAT+AGG - Chr1:29062153-29062172 MsG0180001904.01.T01:intron 20.0%
!!! AGAAAATGGTTTTTTTTAAG+AGG - Chr1:29060556-29060575 MsG0180001904.01.T01:intron 20.0%
!!! AGTAGTAATTTTGCTATAAA+AGG + Chr1:29059885-29059904 None:intergenic 20.0%
!!! ATACTGATTACTAAATTAGA+TGG - Chr1:29058309-29058328 MsG0180001904.01.T01:intron 20.0%
!!! ATATTTCAAGTTTATACCAT+AGG + Chr1:29059126-29059145 None:intergenic 20.0%
!!! ATTATTTTGCAAAACTACTA+AGG + Chr1:29063192-29063211 None:intergenic 20.0%
!!! ATTTACCTGATGATTTATTT+TGG - Chr1:29064217-29064236 MsG0180001904.01.T01:CDS 20.0%
!!! CAAAAATTGAAGATTTTAAG+TGG + Chr1:29058247-29058266 None:intergenic 20.0%
!!! CAAAATAGTAGTTTTATCTT+CGG + Chr1:29064157-29064176 None:intergenic 20.0%
!!! CAAATTGGTTTTTTTCAAAA+AGG + Chr1:29063468-29063487 None:intergenic 20.0%
!!! CATAATTCTATTTTCTTATC+CGG - Chr1:29060392-29060411 MsG0180001904.01.T01:intron 20.0%
!!! CTTTTTGAAAAAAACCAATT+TGG - Chr1:29063466-29063485 MsG0180001904.01.T01:intron 20.0%
!!! GATTTGATATAGGTTTTTTT+AGG - Chr1:29062889-29062908 MsG0180001904.01.T01:intron 20.0%
!!! GTTTCTTTGATGATTATAAT+TGG - Chr1:29057535-29057554 MsG0180001904.01.T01:CDS 20.0%
!!! TAGGCAAAATTATTTTTCAA+AGG - Chr1:29061367-29061386 MsG0180001904.01.T01:intron 20.0%
!!! TATTTCAAGTTTATACCATA+GGG + Chr1:29059125-29059144 None:intergenic 20.0%
!!! TTTCTAAAACAAAAATGTTG+TGG - Chr1:29062028-29062047 MsG0180001904.01.T01:intron 20.0%
!!! TTTGATATAGGTTTTTTTAG+GGG - Chr1:29062891-29062910 MsG0180001904.01.T01:intron 20.0%
!!! TTTTTCAAAAAGGAAGAAAA+AGG + Chr1:29063458-29063477 None:intergenic 20.0%
!!! TTTTTTAGGGGATTTTAAAA+AGG - Chr1:29062903-29062922 MsG0180001904.01.T01:intron 20.0%
! AAACTATTTGGAAACAAATG+AGG + Chr1:29057093-29057112 None:intergenic 25.0%
! AAGAATTGTACCAATTCATT+AGG + Chr1:29064361-29064380 None:intergenic 25.0%
! AATATTGTTCTCCAAGAATT+TGG - Chr1:29060982-29061001 MsG0180001904.01.T01:intron 25.0%
! ACTATGAATATGAAGGTTAT+TGG + Chr1:29060715-29060734 None:intergenic 25.0%
! ATAGCATCTTTACCAATATT+TGG + Chr1:29056883-29056902 None:intergenic 25.0%
! ATCAACACATTAAACAAAAG+TGG + Chr1:29064740-29064759 None:intergenic 25.0%
! ATGGAAAAATCGAAATGTTA+AGG - Chr1:29064997-29065016 MsG0180001904.01.T01:CDS 25.0%
! CTAAACCAAAATAAATCATC+AGG + Chr1:29064225-29064244 None:intergenic 25.0%
! CTAGAATTGTTCATTAAAGA+TGG - Chr1:29059262-29059281 MsG0180001904.01.T01:intron 25.0%
! CTTCATGACATAATTCAATA+TGG + Chr1:29062081-29062100 None:intergenic 25.0%
! GAAAAATGAAAGGTAAAGAT+TGG + Chr1:29064699-29064718 None:intergenic 25.0%
! GAGAATAACTTTATTGTATG+CGG - Chr1:29058159-29058178 MsG0180001904.01.T01:intron 25.0%
! GTAAGTTGTAATCCATTAAA+GGG - Chr1:29059189-29059208 MsG0180001904.01.T01:intron 25.0%
! GTATAACTGTTGAAATACTT+TGG + Chr1:29058293-29058312 None:intergenic 25.0%
! GTGAAAATTTATGTGAACAT+AGG - Chr1:29058589-29058608 MsG0180001904.01.T01:intron 25.0%
! TAAAATAGCCCTAGAAAAAA+GGG + Chr1:29058419-29058438 None:intergenic 25.0%
! TAAACTTGAAATATTCCCTA+TGG - Chr1:29059107-29059126 MsG0180001904.01.T01:intron 25.0%
! TAAATGTAGACACATTTCAA+TGG + Chr1:29061953-29061972 None:intergenic 25.0%
! TAAGTTGTAATCCATTAAAG+GGG - Chr1:29059190-29059209 MsG0180001904.01.T01:intron 25.0%
! TATCCAAATTGTAACTAAGA+TGG - Chr1:29063343-29063362 MsG0180001904.01.T01:intron 25.0%
! TATTCCAAAGAATGTTATCA+AGG - Chr1:29064607-29064626 MsG0180001904.01.T01:CDS 25.0%
! TATTGGAAGACATATAAGAT+AGG - Chr1:29062270-29062289 MsG0180001904.01.T01:intron 25.0%
! TATTTCTTTGCATACCAAAT+TGG + Chr1:29063483-29063502 None:intergenic 25.0%
! TCTTTACAAAAGAAAACAAC+TGG - Chr1:29061301-29061320 MsG0180001904.01.T01:intron 25.0%
! TGGAAAAATCGAAATGTTAA+GGG - Chr1:29064998-29065017 MsG0180001904.01.T01:CDS 25.0%
! TGTAAGTTGTAATCCATTAA+AGG - Chr1:29059188-29059207 MsG0180001904.01.T01:intron 25.0%
! TGTTCTGTCAAAAAAAAAGA+AGG - Chr1:29063037-29063056 MsG0180001904.01.T01:intron 25.0%
! TTACTTCAAAGAATAAGAGT+TGG + Chr1:29062685-29062704 None:intergenic 25.0%
! TTGGATTTGTATCCAAATAT+TGG - Chr1:29056868-29056887 MsG0180001904.01.T01:intron 25.0%
! TTTGTCAGATTTATACCATA+GGG + Chr1:29059150-29059169 None:intergenic 25.0%
!! AAAAAACTTTGAAGAAGTCT+GGG + Chr1:29063379-29063398 None:intergenic 25.0%
!! AAATCCTTGATAACATTCTT+TGG + Chr1:29064614-29064633 None:intergenic 25.0%
!! AATATTACAACTCTTTGAGA+AGG - Chr1:29062454-29062473 MsG0180001904.01.T01:intron 25.0%
!! AGAAAAGTCTTGAATTTTCA+AGG - Chr1:29063288-29063307 MsG0180001904.01.T01:intron 25.0%
!! AGATCATGATGATGATATTA+TGG - Chr1:29063990-29064009 MsG0180001904.01.T01:CDS 25.0%
!! AGTGGTAAAAATACAGTTTT+TGG - Chr1:29061008-29061027 MsG0180001904.01.T01:intron 25.0%
!! ATAGAAAACTTGTTCTACAA+AGG + Chr1:29063141-29063160 None:intergenic 25.0%
!! ATATATTTTGCAATGAAGTG+TGG + Chr1:29064328-29064347 None:intergenic 25.0%
!! ATCTCAAGTTTTTGATAAAG+TGG - Chr1:29060939-29060958 MsG0180001904.01.T01:intron 25.0%
!! ATTTGATAGTTAACACTGAA+TGG - Chr1:29058024-29058043 MsG0180001904.01.T01:CDS 25.0%
!! CATTTTTCACTATTATGAAG+TGG - Chr1:29064711-29064730 MsG0180001904.01.T01:CDS 25.0%
!! TTACTTTACAAACGGTTTTA+GGG - Chr1:29057991-29058010 MsG0180001904.01.T01:CDS 25.0%
!! TTATTTAAGTGTTTTGTGTC+TGG - Chr1:29060070-29060089 MsG0180001904.01.T01:intron 25.0%
!! TTTACTTTACAAACGGTTTT+AGG - Chr1:29057990-29058009 MsG0180001904.01.T01:CDS 25.0%
!! TTTTCATACATATCAGTCAT+TGG - Chr1:29058098-29058117 MsG0180001904.01.T01:intron 25.0%
!! TTTTGTCAGATTTATACCAT+AGG + Chr1:29059151-29059170 None:intergenic 25.0%
!!! AGTTTTTGGATATGAGATTT+CGG - Chr1:29061022-29061041 MsG0180001904.01.T01:intron 25.0%
!!! ATCAACTAGTTTTGCATTTT+AGG - Chr1:29061348-29061367 MsG0180001904.01.T01:intron 25.0%
!!! ATTATTGGTTTACTGTTTAG+AGG + Chr1:29058929-29058948 None:intergenic 25.0%
!!! GATGATTTATTTTGGTTTAG+CGG - Chr1:29064225-29064244 MsG0180001904.01.T01:CDS 25.0%
!!! GTTTTTGTTTACCGATTTAA+TGG - Chr1:29063005-29063024 MsG0180001904.01.T01:intron 25.0%
!!! TTGTTTTGTATGTTCATAAC+CGG - Chr1:29056908-29056927 MsG0180001904.01.T01:intron 25.0%
AAAAGCTTAAACTTAGCCAA+TGG - Chr1:29060689-29060708 MsG0180001904.01.T01:intron 30.0%
AAAAGTGAGTTGTCATTGTT+AGG + Chr1:29062143-29062162 None:intergenic 30.0%
AAAGTGAGTTGTCATTGTTA+GGG + Chr1:29062142-29062161 None:intergenic 30.0%
AAATAACAATATGGAGGATG+AGG - Chr1:29063864-29063883 MsG0180001904.01.T01:CDS 30.0%
AAATACAGTCAACAAATGCA+TGG + Chr1:29058774-29058793 None:intergenic 30.0%
AAATTTGCAGCATAACAATC+AGG + Chr1:29057387-29057406 None:intergenic 30.0%
AAGGAACTACTTAACTACAT+GGG - Chr1:29061618-29061637 MsG0180001904.01.T01:intron 30.0%
AATACAGTCAACAAATGCAT+GGG + Chr1:29058773-29058792 None:intergenic 30.0%
AATGAATTATGTCATGCCAA+AGG + Chr1:29061978-29061997 None:intergenic 30.0%
AATTATACTATACCTTGCAG+TGG + Chr1:29064676-29064695 None:intergenic 30.0%
AATTGTAACTAAGATGGCTA+AGG - Chr1:29063349-29063368 MsG0180001904.01.T01:intron 30.0%
ACATATAAGATAGGTTTGCA+TGG - Chr1:29062279-29062298 MsG0180001904.01.T01:intron 30.0%
ACCTCGAAGAAAATAATTGT+TGG - Chr1:29061832-29061851 MsG0180001904.01.T01:intron 30.0%
ACTCATAACAAAATAGAGTG+TGG - Chr1:29058674-29058693 MsG0180001904.01.T01:intron 30.0%
AGTTATCCACTTATGTGAAT+TGG - Chr1:29058137-29058156 MsG0180001904.01.T01:intron 30.0%
ATAATTGGGATATCACTATG+TGG - Chr1:29057550-29057569 MsG0180001904.01.T01:CDS 30.0%
ATATCAGTCATTGGATTTGA+AGG - Chr1:29058107-29058126 MsG0180001904.01.T01:intron 30.0%
ATATGCTAGTTCAAACTTTG+TGG + Chr1:29062481-29062500 None:intergenic 30.0%
ATATGTGTTGTGCTTATTTG+TGG + Chr1:29064849-29064868 None:intergenic 30.0%
ATCAATGTGTGAAAAGAAGA+AGG - Chr1:29063825-29063844 MsG0180001904.01.T01:CDS 30.0%
ATTCAATATGGAATCCAATG+TGG + Chr1:29062069-29062088 None:intergenic 30.0%
ATTGAACTTGAGTACGTTAT+TGG - Chr1:29059002-29059021 MsG0180001904.01.T01:intron 30.0%
CAAGTAAAATTGCAACAACT+TGG + Chr1:29064515-29064534 None:intergenic 30.0%
CAATCAATTTGAGTAGAAAC+TGG + Chr1:29062007-29062026 None:intergenic 30.0%
CATGGAGGAAAATAACAATA+TGG - Chr1:29063855-29063874 MsG0180001904.01.T01:CDS 30.0%
CTAAAATAGCCCTAGAAAAA+AGG + Chr1:29058420-29058439 None:intergenic 30.0%
CTAGTAAACTCTAGTAAGAT+GGG - Chr1:29059408-29059427 MsG0180001904.01.T01:intron 30.0%
CTCGAATTTCTAATTGAACT+TGG - Chr1:29060213-29060232 MsG0180001904.01.T01:intron 30.0%
CTTACTAGAGTTTACTAGAA+AGG + Chr1:29059406-29059425 None:intergenic 30.0%
CTTTGTTAGTTACTCATATC+AGG + Chr1:29059334-29059353 None:intergenic 30.0%
GAAATGAATAAGATCATTGG+TGG - Chr1:29057024-29057043 MsG0180001904.01.T01:intron 30.0%
GAGGAAATGAATAAGATCAT+TGG - Chr1:29057021-29057040 MsG0180001904.01.T01:intron 30.0%
GTAACTAACAAAGTATGCAT+CGG - Chr1:29059341-29059360 MsG0180001904.01.T01:intron 30.0%
GTGATATGAGGATTCAATAA+GGG - Chr1:29061877-29061896 MsG0180001904.01.T01:intron 30.0%
TAACAATCAGGACATTTCAT+AGG + Chr1:29057375-29057394 None:intergenic 30.0%
TAAGGAACTACTTAACTACA+TGG - Chr1:29061617-29061636 MsG0180001904.01.T01:intron 30.0%
TAATTGGGATATCACTATGT+GGG - Chr1:29057551-29057570 MsG0180001904.01.T01:CDS 30.0%
TAGCCATCTTAGTTACAATT+TGG + Chr1:29063349-29063368 None:intergenic 30.0%
TAGTCGTTGAATTAATGCAA+CGG - Chr1:29059770-29059789 MsG0180001904.01.T01:intron 30.0%
TATTCTCCAATTCACATAAG+TGG + Chr1:29058146-29058165 None:intergenic 30.0%
TATTGCATGTATGTGATATG+AGG - Chr1:29061865-29061884 MsG0180001904.01.T01:intron 30.0%
TCTAGTAAACTCTAGTAAGA+TGG - Chr1:29059407-29059426 MsG0180001904.01.T01:intron 30.0%
TGAGTTAACATCATGATTTG+AGG - Chr1:29058722-29058741 MsG0180001904.01.T01:intron 30.0%
TGATATGAGGATTCAATAAG+GGG - Chr1:29061878-29061897 MsG0180001904.01.T01:intron 30.0%
TGTGATATGAGGATTCAATA+AGG - Chr1:29061876-29061895 MsG0180001904.01.T01:intron 30.0%
TGTGTCTACATTTAAACCTT+TGG - Chr1:29061959-29061978 MsG0180001904.01.T01:intron 30.0%
TTACCACTTAACCAAATTCT+TGG + Chr1:29060996-29061015 None:intergenic 30.0%
TTAGATTAGATTTCTTAGCC+TGG - Chr1:29061917-29061936 MsG0180001904.01.T01:intron 30.0%
TTATATTTCCCAATGCGTAT+CGG - Chr1:29057322-29057341 MsG0180001904.01.T01:CDS 30.0%
TTCAAAAAGGAAGGTCATAA+AGG - Chr1:29063618-29063637 MsG0180001904.01.T01:intron 30.0%
TTGTAGGAAAAACACAAAGT+CGG - Chr1:29061704-29061723 MsG0180001904.01.T01:intron 30.0%
TTGTTCTACAAAGGAAAACT+AGG + Chr1:29063132-29063151 None:intergenic 30.0%
TTTATATTTACCTCCCCTAA+AGG + Chr1:29061066-29061085 None:intergenic 30.0%
! AAGAGTACAAAGAAAGAAAG+AGG - Chr1:29062098-29062117 MsG0180001904.01.T01:intron 30.0%
! AATAAGGCTTGCATTGATAA+CGG - Chr1:29057678-29057697 MsG0180001904.01.T01:CDS 30.0%
! AGATAAAAAGCATACTTGAG+CGG + Chr1:29060847-29060866 None:intergenic 30.0%
! AGTAGAAGTTAACAGCATTT+TGG - Chr1:29058970-29058989 MsG0180001904.01.T01:intron 30.0%
! ATAAGATCATTGGTGGTATT+AGG - Chr1:29057031-29057050 MsG0180001904.01.T01:intron 30.0%
! ATTGGCTAAGTTTAAGCTTT+TGG + Chr1:29060690-29060709 None:intergenic 30.0%
! CATGATCTAAAGTTTGTCTT+CGG + Chr1:29061113-29061132 None:intergenic 30.0%
! GAAAAAACTTTGAAGAAGTC+TGG + Chr1:29063380-29063399 None:intergenic 30.0%
! TGTCAATATTGACTAGTTGT+AGG - Chr1:29061688-29061707 MsG0180001904.01.T01:intron 30.0%
! TGTTTCCAAATAGTTTTCCA+GGG - Chr1:29057097-29057116 MsG0180001904.01.T01:intron 30.0%
! TTGCAAGTTAAACTCTTTTG+AGG + Chr1:29060645-29060664 None:intergenic 30.0%
! TTGTTTCCAAATAGTTTTCC+AGG - Chr1:29057096-29057115 MsG0180001904.01.T01:intron 30.0%
!! ATCAAGTTCACAAAAGCATT+AGG + Chr1:29063595-29063614 None:intergenic 30.0%
!! GAATGGATTTTCTCTCATAT+TGG - Chr1:29058041-29058060 MsG0180001904.01.T01:intron 30.0%
!! GTTAAGAAAAGGAAGTACTA+AGG + Chr1:29062314-29062333 None:intergenic 30.0%
!! GTTGAAATACTTTGGTGTTT+CGG + Chr1:29058285-29058304 None:intergenic 30.0%
!! GTTTTTGGATATGAGATTTC+GGG - Chr1:29061023-29061042 MsG0180001904.01.T01:intron 30.0%
!! TCAAGTTCACAAAAGCATTA+GGG + Chr1:29063594-29063613 None:intergenic 30.0%
!! TTCGAACATTGATTCAGATT+GGG - Chr1:29057737-29057756 MsG0180001904.01.T01:CDS 30.0%
!! TTGAAATACTTTGGTGTTTC+GGG + Chr1:29058284-29058303 None:intergenic 30.0%
!! TTTCGAACATTGATTCAGAT+TGG - Chr1:29057736-29057755 MsG0180001904.01.T01:CDS 30.0%
!!! AAGTTGCATTCATCCTTTTT+TGG - Chr1:29064772-29064791 MsG0180001904.01.T01:CDS 30.0%
!!! CTTTTTTCTAGGGCTATTTT+AGG - Chr1:29058418-29058437 MsG0180001904.01.T01:intron 30.0%
!!! GATTTGCCATCATTGATTTT+AGG + Chr1:29060894-29060913 None:intergenic 30.0%
AAAATGCAGTAACAGAGCAA+CGG + Chr1:29058548-29058567 None:intergenic 35.0%
AAACAACTGGAGTTTACGTA+TGG - Chr1:29061314-29061333 MsG0180001904.01.T01:intron 35.0%
AAACACAAGAAGAACGAGAA+AGG - Chr1:29062753-29062772 MsG0180001904.01.T01:intron 35.0%
AAAGAAGAAGGTAAGTGACA+TGG - Chr1:29063837-29063856 MsG0180001904.01.T01:CDS 35.0%
AAAGGAAGAAAAAGGAAGCA+TGG + Chr1:29063450-29063469 None:intergenic 35.0%
AACATAGGAATCATAGTGTG+TGG - Chr1:29058604-29058623 MsG0180001904.01.T01:intron 35.0%
AATGAGAGATGAGAGTTTCT+TGG + Chr1:29062798-29062817 None:intergenic 35.0%
ACAACACATATCGAAAAGAG+AGG - Chr1:29064858-29064877 MsG0180001904.01.T01:CDS 35.0%
ACACAGCCTAAAATCAATGA+TGG - Chr1:29060885-29060904 MsG0180001904.01.T01:intron 35.0%
ACATGAAAACAACACATAGG+AGG - Chr1:29060107-29060126 MsG0180001904.01.T01:intron 35.0%
ACATTGCAAAACTGATTACC+TGG + Chr1:29059239-29059258 None:intergenic 35.0%
ACGCATTGGGAAATATAAAG+TGG + Chr1:29057320-29057339 None:intergenic 35.0%
ACTTCAAATGTGAAGAGTGA+TGG + Chr1:29064586-29064605 None:intergenic 35.0%
AGAGTGTGGAGAAGTAAAAT+AGG - Chr1:29058688-29058707 MsG0180001904.01.T01:intron 35.0%
AGCATTACAAGCTTTCACAA+AGG - Chr1:29059056-29059075 MsG0180001904.01.T01:intron 35.0%
AGGTTACTCGTTTAATCGAA+CGG - Chr1:29057476-29057495 MsG0180001904.01.T01:intron 35.0%
ATACATATGGAATGTCACCT+AGG + Chr1:29058876-29058895 None:intergenic 35.0%
ATATGAAGGTTATTGGCCAT+TGG + Chr1:29060708-29060727 None:intergenic 35.0%
ATGATCATGCATGTGAAATG+CGG + Chr1:29062534-29062553 None:intergenic 35.0%
ATTATGTTAGGAACGTCTTG+AGG + Chr1:29060378-29060397 None:intergenic 35.0%
ATTCAACGACTAAGACTTCT+TGG + Chr1:29059762-29059781 None:intergenic 35.0%
ATTCCATATGTATGCTGTGT+TGG - Chr1:29058883-29058902 MsG0180001904.01.T01:intron 35.0%
ATTTGAGTAGAAACTGGTCA+CGG + Chr1:29062001-29062020 None:intergenic 35.0%
CACACATGAAAACAACACAT+AGG - Chr1:29060104-29060123 MsG0180001904.01.T01:intron 35.0%
CAGAAACTGAACTCTTACAA+GGG + Chr1:29057897-29057916 None:intergenic 35.0%
CATGTCTATAAAAATCAGCC+TGG - Chr1:29057765-29057784 MsG0180001904.01.T01:CDS 35.0%
CATTGCAAAACTGATTACCT+GGG + Chr1:29059238-29059257 None:intergenic 35.0%
CCGATCACACAAAATCTATT+GGG - Chr1:29059650-29059669 MsG0180001904.01.T01:intron 35.0%
CGAAGACAAACTTTAGATCA+TGG - Chr1:29061111-29061130 MsG0180001904.01.T01:intron 35.0%
CGAGAATGAAAGAATGTACA+AGG - Chr1:29064062-29064081 MsG0180001904.01.T01:CDS 35.0%
GATAAGAAATGACAAGTCGA+AGG + Chr1:29064482-29064501 None:intergenic 35.0%
GCTGAAATGTATATTCAACC+CGG - Chr1:29064298-29064317 MsG0180001904.01.T01:CDS 35.0%
GCTTATCTAAGGGTAATTAG+AGG + Chr1:29060356-29060375 None:intergenic 35.0%
GGAGGAAAATAACAATATGG+AGG - Chr1:29063858-29063877 MsG0180001904.01.T01:CDS 35.0%
GGATACAAATCCAAATTCCT+TGG + Chr1:29056862-29056881 None:intergenic 35.0%
GTATAAGTTATGCATGCATC+AGG - Chr1:29060255-29060274 MsG0180001904.01.T01:intron 35.0%
GTGAATGTGTAAATCCACAT+TGG - Chr1:29062052-29062071 MsG0180001904.01.T01:intron 35.0%
GTGGAGAAGTAAAATAGGTA+TGG - Chr1:29058693-29058712 MsG0180001904.01.T01:intron 35.0%
GTGGTGTTTCTTACTTTATG+TGG - Chr1:29056658-29056677 MsG0180001904.01.T01:CDS 35.0%
TACAAATCCAAATTCCTTGG+TGG + Chr1:29056859-29056878 None:intergenic 35.0%
TAGAGGGGAAAATTCTTTAG+AGG - Chr1:29063735-29063754 MsG0180001904.01.T01:intron 35.0%
TCATTCCAGACCTAATGAAT+TGG - Chr1:29064348-29064367 MsG0180001904.01.T01:CDS 35.0%
TCGTGTAGAAGATCATGATA+AGG - Chr1:29057713-29057732 MsG0180001904.01.T01:CDS 35.0%
TCTCCAAGAATTTGGTTAAG+TGG - Chr1:29060990-29061009 MsG0180001904.01.T01:intron 35.0%
TGAAAGGTTAAGAATGTCCA+AGG - Chr1:29059518-29059537 MsG0180001904.01.T01:intron 35.0%
TGAACTTGATGCGTTCAAAA+AGG - Chr1:29063605-29063624 MsG0180001904.01.T01:intron 35.0%
TGACTTAAGTTAACTCTGGA+AGG + Chr1:29058483-29058502 None:intergenic 35.0%
TGTAAATTCCGATACGCATT+GGG + Chr1:29057333-29057352 None:intergenic 35.0%
TGTCCTGTCATAACCAAAAA+AGG + Chr1:29064788-29064807 None:intergenic 35.0%
TTGTACCAATTCATTAGGTC+TGG + Chr1:29064356-29064375 None:intergenic 35.0%
TTTATCCTAAGAGATCGTAG+AGG - Chr1:29063643-29063662 MsG0180001904.01.T01:intron 35.0%
TTTGCGTCGTTTATTATCTG+TGG - Chr1:29056639-29056658 MsG0180001904.01.T01:CDS 35.0%
! AAATAGTTTTCCAGGGGTTT+CGG - Chr1:29057104-29057123 MsG0180001904.01.T01:intron 35.0%
! ACTTAACTACATGGGTTTTC+TGG - Chr1:29061626-29061645 MsG0180001904.01.T01:intron 35.0%
! CCAATAGATTTTGTGTGATC+GGG + Chr1:29059652-29059671 None:intergenic 35.0%
! CCCAATAGATTTTGTGTGAT+CGG + Chr1:29059653-29059672 None:intergenic 35.0%
! GAATTCTTGTTTGCACATCA+TGG + Chr1:29063249-29063268 None:intergenic 35.0%
! GACTTAAGTTAACTCTGGAA+GGG + Chr1:29058482-29058501 None:intergenic 35.0%
! GAGTGATTTGTCGAAAAAGT+TGG - Chr1:29056816-29056835 MsG0180001904.01.T01:CDS 35.0%
! GCCAACAATTATTTTCTTCG+AGG + Chr1:29061836-29061855 None:intergenic 35.0%
! GTTTCCAAATAGTTTTCCAG+GGG - Chr1:29057098-29057117 MsG0180001904.01.T01:intron 35.0%
! TAGTCATGATGGTTACTTTG+AGG - Chr1:29057002-29057021 MsG0180001904.01.T01:intron 35.0%
! TGATGATGATATTATGGCAG+AGG - Chr1:29063963-29063982 MsG0180001904.01.T01:CDS 35.0%
! TGCTGCTGATGATGATATTA+TGG - Chr1:29063957-29063976 MsG0180001904.01.T01:CDS 35.0%
! TTACTGTATAGTGCTACTCT+AGG + Chr1:29059463-29059482 None:intergenic 35.0%
! TTGCTGATTGTTAGTCATGA+TGG - Chr1:29056991-29057010 MsG0180001904.01.T01:intron 35.0%
!! CTCTCATCTCTCATTTTTCT+TGG - Chr1:29062803-29062822 MsG0180001904.01.T01:intron 35.0%
!! GATTTAGAAAGGGTTGATGA+TGG - Chr1:29056739-29056758 MsG0180001904.01.T01:CDS 35.0%
!!! ATTTTGGTTTAGCGGACATT+GGG - Chr1:29064233-29064252 MsG0180001904.01.T01:CDS 35.0%
!!! CATCCTTTTTTGGTTATGAC+AGG - Chr1:29064782-29064801 MsG0180001904.01.T01:CDS 35.0%
!!! GATGAGCTTTATTTTGACGA+TGG - Chr1:29063700-29063719 MsG0180001904.01.T01:intron 35.0%
!!! GTTCCATACCCTTTTTTCTA+GGG - Chr1:29058408-29058427 MsG0180001904.01.T01:intron 35.0%
!!! TATTTTGCACAAGAGCACTT+TGG - Chr1:29059545-29059564 MsG0180001904.01.T01:intron 35.0%
!!! TATTTTGGTTTAGCGGACAT+TGG - Chr1:29064232-29064251 MsG0180001904.01.T01:CDS 35.0%
!!! TGTTCCATACCCTTTTTTCT+AGG - Chr1:29058407-29058426 MsG0180001904.01.T01:intron 35.0%
AAACCCCGATATTGCCTTTA+GGG - Chr1:29061049-29061068 MsG0180001904.01.T01:intron 40.0%
AAACGCTAGATAGATTGCCT+AGG - Chr1:29058856-29058875 MsG0180001904.01.T01:intron 40.0%
AACGTCTTGAGGCTTATCTA+AGG + Chr1:29060367-29060386 None:intergenic 40.0%
AAGAGACGAACTTAGTAACC+AGG + Chr1:29058654-29058673 None:intergenic 40.0%
AAGATCCGGGTTCAAATTCA+GGG + Chr1:29060133-29060152 None:intergenic 40.0%
AAGCTTTCACAAAGGTGAAG+AGG - Chr1:29059064-29059083 MsG0180001904.01.T01:intron 40.0%
AAGGGAATCCTGATCAGTAT+GGG - Chr1:29057172-29057191 MsG0180001904.01.T01:intron 40.0%
AATCAGCCTGGTTATAAAGC+CGG - Chr1:29057777-29057796 MsG0180001904.01.T01:CDS 40.0%
AATGTCTAGGAGTTTGAACC+CGG - Chr1:29060160-29060179 MsG0180001904.01.T01:intron 40.0%
AATTTGAACCCGGATCTTCA+CGG - Chr1:29060135-29060154 MsG0180001904.01.T01:intron 40.0%
ACAAATGATTCCTTCGTCTG+TGG + Chr1:29058072-29058091 None:intergenic 40.0%
ACAACCACCTTAAGATACTG+CGG + Chr1:29056934-29056953 None:intergenic 40.0%
ACGACTAAGACTTCTTGGAA+AGG + Chr1:29059757-29059776 None:intergenic 40.0%
ACGTCTTGAGGCTTATCTAA+GGG + Chr1:29060366-29060385 None:intergenic 40.0%
ACTAACAAAGTATGCATCGG+AGG - Chr1:29059344-29059363 MsG0180001904.01.T01:intron 40.0%
ACTCGTTTAATCGAACGGTT+TGG - Chr1:29057481-29057500 MsG0180001904.01.T01:intron 40.0%
AGACATTTACCGTGATCATC+CGG + Chr1:29060182-29060201 None:intergenic 40.0%
AGAGACGAACTTAGTAACCA+GGG + Chr1:29058653-29058672 None:intergenic 40.0%
AGAGTCTTGCTAAGGTTGTA+GGG - Chr1:29056956-29056975 MsG0180001904.01.T01:intron 40.0%
AGAGTGGGATAGTTTAGTTG+CGG - Chr1:29057437-29057456 MsG0180001904.01.T01:intron 40.0%
AGTACGTTATTGGCATGACT+AGG - Chr1:29059012-29059031 MsG0180001904.01.T01:intron 40.0%
AGTTGTCATTGTTAGGGCAT+TGG + Chr1:29062136-29062155 None:intergenic 40.0%
AGTTTAGTTGCGGAGAGAAT+GGG - Chr1:29057447-29057466 MsG0180001904.01.T01:intron 40.0%
ATAAAGCCGGGTTTAAAGGT+TGG - Chr1:29057790-29057809 MsG0180001904.01.T01:CDS 40.0%
ATACCACTCCATTCAAACCA+TGG - Chr1:29061804-29061823 MsG0180001904.01.T01:intron 40.0%
ATATGTAAGAAGCTAGCAGC+TGG - Chr1:29059707-29059726 MsG0180001904.01.T01:intron 40.0%
ATGGCTGGAAGCAATTTAGA+GGG - Chr1:29063719-29063738 MsG0180001904.01.T01:intron 40.0%
ATTTGCTTAACCCTAGGTAG+AGG - Chr1:29064438-29064457 MsG0180001904.01.T01:CDS 40.0%
CAAAAACCCGTCGGATTTAT+CGG - Chr1:29059617-29059636 MsG0180001904.01.T01:intron 40.0%
CAACCAACACAGCATACATA+TGG + Chr1:29058889-29058908 None:intergenic 40.0%
CCAGAAACTGAACTCTTACA+AGG + Chr1:29057898-29057917 None:intergenic 40.0%
CCCGATCACACAAAATCTAT+TGG - Chr1:29059649-29059668 MsG0180001904.01.T01:intron 40.0%
CCTTGTAAGAGTTCAGTTTC+TGG - Chr1:29057895-29057914 MsG0180001904.01.T01:CDS 40.0%
CTGTAAATTCCGATACGCAT+TGG + Chr1:29057334-29057353 None:intergenic 40.0%
CTTGATGCGTTCAAAAAGGA+AGG - Chr1:29063609-29063628 MsG0180001904.01.T01:intron 40.0%
CTTGTGCAAAATAGACTCCT+TGG + Chr1:29059538-29059557 None:intergenic 40.0%
GAAACCACGTCTTAGAGATT+TGG - Chr1:29056615-29056634 MsG0180001904.01.T01:CDS 40.0%
GAAACCCCTGGAAAACTATT+TGG + Chr1:29057105-29057124 None:intergenic 40.0%
GACGAGATTATTGCACTTCA+TGG + Chr1:29060443-29060462 None:intergenic 40.0%
GAGGTAATTGCTTTATAGGC+TGG - Chr1:29059580-29059599 MsG0180001904.01.T01:intron 40.0%
GGAAACAAATGAGGCGAATA+CGG + Chr1:29057084-29057103 None:intergenic 40.0%
GGTCTGACTTAAGTTAACTC+TGG + Chr1:29058487-29058506 None:intergenic 40.0%
GGTTATAAAGCCGGGTTTAA+AGG - Chr1:29057786-29057805 MsG0180001904.01.T01:CDS 40.0%
GTCATCACCATCATCATCAT+CGG + Chr1:29064037-29064056 None:intergenic 40.0%
GTGAAATACACCCACAAAGT+GGG + Chr1:29061752-29061771 None:intergenic 40.0%
TAAAGCCGGGTTTAAAGGTT+GGG - Chr1:29057791-29057810 MsG0180001904.01.T01:CDS 40.0%
TACACAGGTCTACCAAATGA+GGG + Chr1:29057588-29057607 None:intergenic 40.0%
TAGCCCTAGAAAAAAGGGTA+TGG + Chr1:29058414-29058433 None:intergenic 40.0%
TAGTCCATTTGCTTAACCCT+AGG - Chr1:29064432-29064451 MsG0180001904.01.T01:CDS 40.0%
TAGTTTAGTTGCGGAGAGAA+TGG - Chr1:29057446-29057465 MsG0180001904.01.T01:intron 40.0%
TCTACCTAGGGTTAAGCAAA+TGG + Chr1:29064439-29064458 None:intergenic 40.0%
TGAAATACACCCACAAAGTG+GGG + Chr1:29061751-29061770 None:intergenic 40.0%
TGCAATGAAGTGTGGATTTC+CGG + Chr1:29064320-29064339 None:intergenic 40.0%
TGCTTCAACGACACAATCTT+CGG + Chr1:29057210-29057229 None:intergenic 40.0%
TGGGGAGGTAATTGCTTTAT+AGG - Chr1:29059576-29059595 MsG0180001904.01.T01:intron 40.0%
TGTGAAATACACCCACAAAG+TGG + Chr1:29061753-29061772 None:intergenic 40.0%
TTACACTCCGATAAATCCGA+CGG + Chr1:29059627-29059646 None:intergenic 40.0%
TTACTTCAGTACCCTGTTCT+TGG - Chr1:29058746-29058765 MsG0180001904.01.T01:intron 40.0%
TTCAATGGTACAAGAAAGCC+AGG + Chr1:29061938-29061957 None:intergenic 40.0%
TTGGTCAGCGTGAGAAAATT+AGG - Chr1:29057951-29057970 MsG0180001904.01.T01:CDS 40.0%
TTGTGGCAAGATGTGATGAT+AGG + Chr1:29064832-29064851 None:intergenic 40.0%
TTTGTTGCCACCAAGGAATT+TGG - Chr1:29056849-29056868 MsG0180001904.01.T01:intron 40.0%
! AAGTGTTTTGTGTCTGGAGA+CGG - Chr1:29060076-29060095 MsG0180001904.01.T01:intron 40.0%
! AGAGAAGCACACTGAAAGAA+TGG - Chr1:29063403-29063422 MsG0180001904.01.T01:intron 40.0%
! AGGGGAAAATTCTTTAGAGG+AGG - Chr1:29063738-29063757 MsG0180001904.01.T01:intron 40.0%
! CATGATACCGATGATGATGA+TGG - Chr1:29064027-29064046 MsG0180001904.01.T01:CDS 40.0%
! CTCGAAACTATTTTCAACCC+AGG - Chr1:29059218-29059237 MsG0180001904.01.T01:intron 40.0%
! GTTGTCATTGTTAGGGCATT+GGG + Chr1:29062135-29062154 None:intergenic 40.0%
! TAACTACATGGGTTTTCTGG+TGG - Chr1:29061629-29061648 MsG0180001904.01.T01:intron 40.0%
! TGACATGTTTTGTGAAGCAG+AGG + Chr1:29064640-29064659 None:intergenic 40.0%
! TGTTAAGGGTGCACATTGTT+AGG - Chr1:29065012-29065031 MsG0180001904.01.T01:CDS 40.0%
! TTAAACCCGGCTTTATAACC+AGG + Chr1:29057786-29057805 None:intergenic 40.0%
! TTGTGTCGTTGAAGCATCAT+TGG - Chr1:29057214-29057233 MsG0180001904.01.T01:intron 40.0%
!! AAAGCCAAATCTCTAAGACG+TGG + Chr1:29056622-29056641 None:intergenic 40.0%
!! AGTTGAATTTGTTGCCACCA+AGG - Chr1:29056842-29056861 MsG0180001904.01.T01:intron 40.0%
!! CGAAAGAGAAGCATTGTGAA+GGG - Chr1:29057154-29057173 MsG0180001904.01.T01:intron 40.0%
!! CTCATTTTTCTTGGACTTGC+AGG - Chr1:29062812-29062831 MsG0180001904.01.T01:intron 40.0%
!! GGTTTTGTCCATGGTTTGAA+TGG + Chr1:29061815-29061834 None:intergenic 40.0%
!! TACTTTGGTGTTTCGGGAAT+CGG + Chr1:29058278-29058297 None:intergenic 40.0%
!! TTGGTGGTGGATGATGAATA+CGG - Chr1:29057233-29057252 MsG0180001904.01.T01:intron 40.0%
!! TTTCTTCGAGGTTTTGTCCA+TGG + Chr1:29061824-29061843 None:intergenic 40.0%
!!! AGCTTTATTTTGACGATGGC+TGG - Chr1:29063704-29063723 MsG0180001904.01.T01:intron 40.0%
!!! GGCTATTTTAGGTTTTCCAC+TGG - Chr1:29058429-29058448 MsG0180001904.01.T01:intron 40.0%
AAAGCCGGGTTTAAAGGTTG+GGG - Chr1:29057792-29057811 MsG0180001904.01.T01:CDS 45.0%
AAATGCATGGGACCAAGAAC+AGG + Chr1:29058761-29058780 None:intergenic 45.0%
AACAAAGTATGCATCGGAGG+AGG - Chr1:29059347-29059366 MsG0180001904.01.T01:intron 45.0%
AACCCCGATATTGCCTTTAG+GGG - Chr1:29061050-29061069 MsG0180001904.01.T01:intron 45.0%
AAGTGAACAGCACTAGTCCT+TGG + Chr1:29057624-29057643 None:intergenic 45.0%
AATGCATGGGACCAAGAACA+GGG + Chr1:29058760-29058779 None:intergenic 45.0%
ACAAAGTATGCATCGGAGGA+GGG - Chr1:29059348-29059367 MsG0180001904.01.T01:intron 45.0%
ACAAATCACTCTGCTGTGGA+AGG + Chr1:29056807-29056826 None:intergenic 45.0%
ACACAATCTTCGGCAAACGA+TGG + Chr1:29057200-29057219 None:intergenic 45.0%
ACCTCCCCTAAAGGCAATAT+CGG + Chr1:29061057-29061076 None:intergenic 45.0%
AGAAAGCCACATCAACTCCT+TGG + Chr1:29059684-29059703 None:intergenic 45.0%
AGACATTGACCGTGAAGATC+CGG + Chr1:29060147-29060166 None:intergenic 45.0%
AGAGATGAGAGTTTCTTGGC+TGG + Chr1:29062794-29062813 None:intergenic 45.0%
AGCACTTTGGCCAAGTTATG+GGG - Chr1:29059558-29059577 MsG0180001904.01.T01:intron 45.0%
AGTGAACAGCACTAGTCCTT+GGG + Chr1:29057623-29057642 None:intergenic 45.0%
AGTTTGAACCCGGATGATCA+CGG - Chr1:29060170-29060189 MsG0180001904.01.T01:intron 45.0%
ATCAGCCTGGTTATAAAGCC+GGG - Chr1:29057778-29057797 MsG0180001904.01.T01:CDS 45.0%
ATGATGAATACGGTGTGGGA+TGG - Chr1:29057243-29057262 MsG0180001904.01.T01:intron 45.0%
ATTGGCATGACTAGGAGACT+AGG - Chr1:29059020-29059039 MsG0180001904.01.T01:intron 45.0%
CAAACCCCGATATTGCCTTT+AGG - Chr1:29061048-29061067 MsG0180001904.01.T01:intron 45.0%
CAAAGCTCAAGCATAAGTGG+CGG + Chr1:29057839-29057858 None:intergenic 45.0%
CAACTGGAGTTTACGTATGG+TGG - Chr1:29061317-29061336 MsG0180001904.01.T01:intron 45.0%
CAATATGGAGGATGAGGAAG+AGG - Chr1:29063870-29063889 MsG0180001904.01.T01:CDS 45.0%
CACATTGCTCAAAAACCCGT+CGG - Chr1:29059608-29059627 MsG0180001904.01.T01:intron 45.0%
CATGTCAAAGCTCGTCGTAT+TGG - Chr1:29063676-29063695 MsG0180001904.01.T01:intron 45.0%
CTCTTCCTCTACGATCTCTT+AGG + Chr1:29063651-29063670 None:intergenic 45.0%
CTTCAAATCGCGACGATAAC+CGG + Chr1:29056767-29056786 None:intergenic 45.0%
CTTGCAGTGGCAACATTCAA+GGG + Chr1:29064663-29064682 None:intergenic 45.0%
GAAATACACCCACAAAGTGG+GGG + Chr1:29061750-29061769 None:intergenic 45.0%
GAAGAAGGTAAGTGACATGG+AGG - Chr1:29063840-29063859 MsG0180001904.01.T01:CDS 45.0%
GAAGATCCGGGTTCAAATTC+AGG + Chr1:29060134-29060153 None:intergenic 45.0%
GAAGGGAATCCTGATCAGTA+TGG - Chr1:29057171-29057190 MsG0180001904.01.T01:intron 45.0%
GACATTTACCGTGATCATCC+GGG + Chr1:29060181-29060200 None:intergenic 45.0%
GAGACGAACTTAGTAACCAG+GGG + Chr1:29058652-29058671 None:intergenic 45.0%
GAGAGTCTTGCTAAGGTTGT+AGG - Chr1:29056955-29056974 MsG0180001904.01.T01:intron 45.0%
GAGATCGTAGAGGAAGAGAT+TGG - Chr1:29063653-29063672 MsG0180001904.01.T01:intron 45.0%
GAGCACTTTGGCCAAGTTAT+GGG - Chr1:29059557-29059576 MsG0180001904.01.T01:intron 45.0%
GATCTTCACGGTCAATGTCT+AGG - Chr1:29060147-29060166 MsG0180001904.01.T01:intron 45.0%
GATGGCTGGAAGCAATTTAG+AGG - Chr1:29063718-29063737 MsG0180001904.01.T01:intron 45.0%
GCAATGAAGTGTGGATTTCC+GGG + Chr1:29064319-29064338 None:intergenic 45.0%
GCAATTACCTCCCCATAACT+TGG + Chr1:29059571-29059590 None:intergenic 45.0%
GCATCAATTTCGTCGTCTTC+AGG + Chr1:29064280-29064299 None:intergenic 45.0%
GCGACTGTTTATCCCTCATT+TGG - Chr1:29057573-29057592 MsG0180001904.01.T01:CDS 45.0%
GGTTGTTGAGAGTCTTGCTA+AGG - Chr1:29056948-29056967 MsG0180001904.01.T01:intron 45.0%
GTACACAGGTCTACCAAATG+AGG + Chr1:29057589-29057608 None:intergenic 45.0%
GTGGATGATGAATACGGTGT+GGG - Chr1:29057239-29057258 MsG0180001904.01.T01:intron 45.0%
GTTTAAAGGTTGGGGAGGTT+GGG - Chr1:29057800-29057819 MsG0180001904.01.T01:CDS 45.0%
TACACTCCGATAAATCCGAC+GGG + Chr1:29059626-29059645 None:intergenic 45.0%
TCGACTAACTCCTCTACCTA+GGG + Chr1:29064451-29064470 None:intergenic 45.0%
TCTATTGGGAGTTACGACCA+AGG - Chr1:29059664-29059683 MsG0180001904.01.T01:intron 45.0%
TCTTTCAGTGTGCTTCTCTG+TGG + Chr1:29063402-29063421 None:intergenic 45.0%
TGGCTGGAAGCAATTTAGAG+GGG - Chr1:29063720-29063739 MsG0180001904.01.T01:intron 45.0%
TGTCCATGGTTTGAATGGAG+TGG + Chr1:29061810-29061829 None:intergenic 45.0%
TTAATGCAACGGCTGAGAGT+TGG - Chr1:29059781-29059800 MsG0180001904.01.T01:intron 45.0%
TTATGCATGCATCAGGACTC+AGG - Chr1:29060262-29060281 MsG0180001904.01.T01:intron 45.0%
TTCGACAAATCACTCTGCTG+TGG + Chr1:29056811-29056830 None:intergenic 45.0%
TTCGACTAACTCCTCTACCT+AGG + Chr1:29064452-29064471 None:intergenic 45.0%
TTCGAGCGAAACCCCTTTAA+TGG + Chr1:29059204-29059223 None:intergenic 45.0%
TTTAAAGGTTGGGGAGGTTG+GGG - Chr1:29057801-29057820 MsG0180001904.01.T01:CDS 45.0%
TTTGGAGGAGCGATACATGT+CGG + Chr1:29057862-29057881 None:intergenic 45.0%
! AAGGGTGCACATTGTTAGGA+AGG - Chr1:29065016-29065035 MsG0180001904.01.T01:CDS 45.0%
! AGAGCACTTTGGCCAAGTTA+TGG - Chr1:29059556-29059575 MsG0180001904.01.T01:intron 45.0%
! AGGACTAGTGCTGTTCACTT+TGG - Chr1:29057624-29057643 MsG0180001904.01.T01:CDS 45.0%
! ATTGGTTCTTCCACAGACGA+AGG - Chr1:29058059-29058078 MsG0180001904.01.T01:intron 45.0%
! GCTGTTCACTTTGGGAAATG+TGG - Chr1:29057633-29057652 MsG0180001904.01.T01:CDS 45.0%
! GGACTAGTGCTGTTCACTTT+GGG - Chr1:29057625-29057644 MsG0180001904.01.T01:CDS 45.0%
! GGGAAATGTGGTTTGCATCA+GGG - Chr1:29057645-29057664 MsG0180001904.01.T01:CDS 45.0%
! TGATGATGATGACGATGACG+AGG - Chr1:29063906-29063925 MsG0180001904.01.T01:CDS 45.0%
! TGGGAAATGTGGTTTGCATC+AGG - Chr1:29057644-29057663 MsG0180001904.01.T01:CDS 45.0%
! TGTCGTTGAAGCATCATTGG+TGG - Chr1:29057217-29057236 MsG0180001904.01.T01:intron 45.0%
!! ACGGGTTTTTGAGCAATGTG+AGG + Chr1:29059608-29059627 None:intergenic 45.0%
!! ACTTTGGTGTTTCGGGAATC+GGG + Chr1:29058277-29058296 None:intergenic 45.0%
!! CGGGTTTTTGAGCAATGTGA+GGG + Chr1:29059607-29059626 None:intergenic 45.0%
!! GAAAGGGTTGATGATGGTTC+CGG - Chr1:29056745-29056764 MsG0180001904.01.T01:CDS 45.0%
!! GCGAAAGAGAAGCATTGTGA+AGG - Chr1:29057153-29057172 MsG0180001904.01.T01:intron 45.0%
!! GCTACTCTAGGACTCATTGA+GGG + Chr1:29059451-29059470 None:intergenic 45.0%
!! GGGTTTTTGAGCAATGTGAG+GGG + Chr1:29059606-29059625 None:intergenic 45.0%
!! GGTTTCGGTTGGTGATTGTA+AGG - Chr1:29057119-29057138 MsG0180001904.01.T01:intron 45.0%
!! GTTTTCCACTGGAAGCATAC+TGG - Chr1:29058440-29058459 MsG0180001904.01.T01:intron 45.0%
!! TGCTACTCTAGGACTCATTG+AGG + Chr1:29059452-29059471 None:intergenic 45.0%
!! TTACGACCAAGGAGTTGATG+TGG - Chr1:29059675-29059694 MsG0180001904.01.T01:intron 45.0%
!! TTGTTAGGGCATTGGGTCAT+TGG + Chr1:29062128-29062147 None:intergenic 45.0%
!! TAAAAAAGAAAAAAAATAAA+TGG + Chr1:29061411-29061430 None:intergenic 5.0%
!!! TTTTTTATTTTTTTTTATCA+TGG - Chr1:29062970-29062989 MsG0180001904.01.T01:intron 5.0%
ACCTCCCCAACCTTTAAACC+CGG + Chr1:29057799-29057818 None:intergenic 50.0%
ACTTTGGCCAAGTTATGGGG+AGG - Chr1:29059561-29059580 MsG0180001904.01.T01:intron 50.0%
AGAACCTGCAAGTGCAAAGC+TGG - Chr1:29064114-29064133 MsG0180001904.01.T01:CDS 50.0%
AGACCTGTGTACACGTTACG+AGG - Chr1:29057597-29057616 MsG0180001904.01.T01:CDS 50.0%
ATGGAGGATGAGGAAGAGGA+CGG - Chr1:29063874-29063893 MsG0180001904.01.T01:CDS 50.0%
ATGGTCGAGTACGTGTGCTA+GGG - Chr1:29064901-29064920 MsG0180001904.01.T01:CDS 50.0%
CAAGGGAGATACAGTGCCTT+TGG + Chr1:29057880-29057899 None:intergenic 50.0%
CAAGTACGTACGTGGAGAGA+TGG - Chr1:29064882-29064901 MsG0180001904.01.T01:CDS 50.0%
CATCTCTCCACGTACGTACT+TGG + Chr1:29064884-29064903 None:intergenic 50.0%
CCTCCCCTAAAGGCAATATC+GGG + Chr1:29061056-29061075 None:intergenic 50.0%
CCTCTCGAGTTCACATCAGA+AGG + Chr1:29057414-29057433 None:intergenic 50.0%
CCTTCTGATGTGAACTCGAG+AGG - Chr1:29057411-29057430 MsG0180001904.01.T01:intron 50.0%
CCTTGAATGTTGCCACTGCA+AGG - Chr1:29064661-29064680 MsG0180001904.01.T01:CDS 50.0%
CCTTGCAGTGGCAACATTCA+AGG + Chr1:29064664-29064683 None:intergenic 50.0%
CGATGGTTCCCATACTGATC+AGG + Chr1:29057183-29057202 None:intergenic 50.0%
CGGCAAAGCTCAAGCATAAG+TGG + Chr1:29057842-29057861 None:intergenic 50.0%
CTCCCCTAAAGGCAATATCG+GGG + Chr1:29061055-29061074 None:intergenic 50.0%
CTTACCAGCTTTGCACTTGC+AGG + Chr1:29064121-29064140 None:intergenic 50.0%
GAACTCGAGAGGTGAAGAGT+GGG - Chr1:29057422-29057441 MsG0180001904.01.T01:intron 50.0%
GACATGTATCGCTCCTCCAA+AGG - Chr1:29057861-29057880 MsG0180001904.01.T01:CDS 50.0%
GACATTGACCGTGAAGATCC+GGG + Chr1:29060146-29060165 None:intergenic 50.0%
GAGATTGTGCTGCGTGAAGA+TGG - Chr1:29064978-29064997 MsG0180001904.01.T01:CDS 50.0%
GCGGAGAGAATGGGAAACAT+AGG - Chr1:29057456-29057475 MsG0180001904.01.T01:intron 50.0%
GGTGGATGATGAATACGGTG+TGG - Chr1:29057238-29057257 MsG0180001904.01.T01:intron 50.0%
GGTTTAAAGGTTGGGGAGGT+TGG - Chr1:29057799-29057818 MsG0180001904.01.T01:CDS 50.0%
GTGTGAGTGTAGTAAACCCC+TGG - Chr1:29058633-29058652 MsG0180001904.01.T01:intron 50.0%
TAACCGGCCGCAGTATCTTA+AGG - Chr1:29056924-29056943 MsG0180001904.01.T01:intron 50.0%
TACCAACAACGGCAATTCCC+CGG - Chr1:29060595-29060614 MsG0180001904.01.T01:intron 50.0%
TGAACTCGAGAGGTGAAGAG+TGG - Chr1:29057421-29057440 MsG0180001904.01.T01:intron 50.0%
TGCTCGAGTATGTCTTGTGC+CGG + Chr1:29060617-29060636 None:intergenic 50.0%
TTAAAGGTTGGGGAGGTTGG+GGG - Chr1:29057802-29057821 MsG0180001904.01.T01:CDS 50.0%
TTCTGCCAGTATGCTTCCAG+TGG + Chr1:29058448-29058467 None:intergenic 50.0%
! AGTTTTCCAGGGGTTTCGGT+TGG - Chr1:29057108-29057127 MsG0180001904.01.T01:intron 50.0%
! ATGTGGTTTGCATCAGGGTC+AGG - Chr1:29057650-29057669 MsG0180001904.01.T01:CDS 50.0%
! CGTTGAAGCATCATTGGTGG+TGG - Chr1:29057220-29057239 MsG0180001904.01.T01:intron 50.0%
! TGTGGTTTGCATCAGGGTCA+GGG - Chr1:29057651-29057670 MsG0180001904.01.T01:CDS 50.0%
!! CTCTAGGACTCATTGAGGGA+AGG + Chr1:29059447-29059466 None:intergenic 50.0%
!! GGCTTGCATTGATAACGGCA+TGG - Chr1:29057683-29057702 MsG0180001904.01.T01:CDS 50.0%
!! GTGGGATGGATTGAGTGAGA+CGG - Chr1:29057257-29057276 MsG0180001904.01.T01:intron 50.0%
!! TGGGATGGATTGAGTGAGAC+GGG - Chr1:29057258-29057277 MsG0180001904.01.T01:intron 50.0%
AGAGAGGCCAAGTACGTACG+TGG - Chr1:29064874-29064893 MsG0180001904.01.T01:CDS 55.0%
CAATCACCAACCGAAACCCC+TGG + Chr1:29057117-29057136 None:intergenic 55.0%
CCACCTTAAGATACTGCGGC+CGG + Chr1:29056930-29056949 None:intergenic 55.0%
CTCGAGTATGTCTTGTGCCG+GGG + Chr1:29060615-29060634 None:intergenic 55.0%
GATGAGGAAGAGGACGGTGA+TGG - Chr1:29063880-29063899 MsG0180001904.01.T01:CDS 55.0%
GATGGTCGAGTACGTGTGCT+AGG - Chr1:29064900-29064919 MsG0180001904.01.T01:CDS 55.0%
GCATGCATCAGGACTCAGGA+GGG - Chr1:29060266-29060285 MsG0180001904.01.T01:intron 55.0%
GCTCGAGTATGTCTTGTGCC+GGG + Chr1:29060616-29060635 None:intergenic 55.0%
GGAGGCCCTGAATTTGAACC+CGG - Chr1:29060125-29060144 MsG0180001904.01.T01:intron 55.0%
GGCACAAGACATACTCGAGC+AGG - Chr1:29060616-29060635 MsG0180001904.01.T01:intron 55.0%
GGGAGATACAGTGCCTTTGG+AGG + Chr1:29057877-29057896 None:intergenic 55.0%
TAAAGGTTGGGGAGGTTGGG+GGG - Chr1:29057803-29057822 MsG0180001904.01.T01:CDS 55.0%
TCAGGGTCAGGGGGAGAATA+AGG - Chr1:29057662-29057681 MsG0180001904.01.T01:CDS 55.0%
TCGAGTACGTGTGCTAGGGT+GGG - Chr1:29064905-29064924 MsG0180001904.01.T01:CDS 55.0%
TGCATGCATCAGGACTCAGG+AGG - Chr1:29060265-29060284 MsG0180001904.01.T01:intron 55.0%
TGTACACGTTACGAGGCCCA+AGG - Chr1:29057604-29057623 MsG0180001904.01.T01:CDS 55.0%
TTGGTCGGGGAAGGGGATAT+GGG - Chr1:29059800-29059819 MsG0180001904.01.T01:intron 55.0%
! AGTGAGACGGGAGTGCATTC+TGG - Chr1:29057270-29057289 MsG0180001904.01.T01:intron 55.0%
! CCCGATATTGCCTTTAGGGG+AGG - Chr1:29061053-29061072 MsG0180001904.01.T01:intron 55.0%
! GTGAGACGGGAGTGCATTCT+GGG - Chr1:29057271-29057290 MsG0180001904.01.T01:intron 55.0%
! GTGGTTTGCATCAGGGTCAG+GGG - Chr1:29057652-29057671 MsG0180001904.01.T01:CDS 55.0%
! TGCAACGGCTGAGAGTTGGT+CGG - Chr1:29059785-29059804 MsG0180001904.01.T01:intron 55.0%
! TGGTTTGCATCAGGGTCAGG+GGG - Chr1:29057653-29057672 MsG0180001904.01.T01:CDS 55.0%
!! CATGGGTTTTCTGGTGGTCG+TGG - Chr1:29061635-29061654 MsG0180001904.01.T01:intron 55.0%
CCCACAAAGTGGGGGCAACT+CGG + Chr1:29061742-29061761 None:intergenic 60.0%
CCGAGTTGCCCCCACTTTGT+GGG - Chr1:29061739-29061758 MsG0180001904.01.T01:intron 60.0%
CCGGCCGCAGTATCTTAAGG+TGG - Chr1:29056927-29056946 MsG0180001904.01.T01:intron 60.0%
GCCGGGTTTAAAGGTTGGGG+AGG - Chr1:29057795-29057814 MsG0180001904.01.T01:CDS 60.0%
GGGCCTCGTAACGTGTACAC+AGG + Chr1:29057603-29057622 None:intergenic 60.0%
GTCGAGTACGTGTGCTAGGG+TGG - Chr1:29064904-29064923 MsG0180001904.01.T01:CDS 60.0%
GTTGGTCGGGGAAGGGGATA+TGG - Chr1:29059799-29059818 MsG0180001904.01.T01:intron 60.0%
TGCCGGGGAATTGCCGTTGT+TGG + Chr1:29060600-29060619 None:intergenic 60.0%
! CAACGGCTGAGAGTTGGTCG+GGG - Chr1:29059787-29059806 MsG0180001904.01.T01:intron 60.0%
! CTGAGAGTTGGTCGGGGAAG+GGG - Chr1:29059793-29059812 MsG0180001904.01.T01:intron 60.0%
! GCAACGGCTGAGAGTTGGTC+GGG - Chr1:29059786-29059805 MsG0180001904.01.T01:intron 60.0%
! GCTGAGAGTTGGTCGGGGAA+GGG - Chr1:29059792-29059811 MsG0180001904.01.T01:intron 60.0%
GCCGAGTTGCCCCCACTTTG+TGG - Chr1:29061738-29061757 MsG0180001904.01.T01:intron 65.0%
GGGCAACTCGGCGTCAAGTG+GGG + Chr1:29061730-29061749 None:intergenic 65.0%
GGGGCAACTCGGCGTCAAGT+GGG + Chr1:29061731-29061750 None:intergenic 65.0%
! GGCTGAGAGTTGGTCGGGGA+AGG - Chr1:29059791-29059810 MsG0180001904.01.T01:intron 65.0%
!! GCATCGGAGGAGGGCGTTTG+AGG - Chr1:29059357-29059376 MsG0180001904.01.T01:intron 65.0%
GGGGGCAACTCGGCGTCAAG+TGG + Chr1:29061732-29061751 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 29056601 29065043 29056601 ID=MsG0180001904.01;Name=MsG0180001904.01
Chr1 mRNA 29056601 29065043 29056601 ID=MsG0180001904.01.T01;Parent=MsG0180001904.01;Name=MsG0180001904.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|1|1|5|0|745
Chr1 exon 29063746 29065043 29063746 ID=MsG0180001904.01.T01:exon:42127;Parent=MsG0180001904.01.T01
Chr1 exon 29060793 29060817 29060793 ID=MsG0180001904.01.T01:exon:42126;Parent=MsG0180001904.01.T01
Chr1 exon 29057509 29058058 29057509 ID=MsG0180001904.01.T01:exon:42125;Parent=MsG0180001904.01.T01
Chr1 exon 29057275 29057399 29057275 ID=MsG0180001904.01.T01:exon:42124;Parent=MsG0180001904.01.T01
Chr1 exon 29056601 29056840 29056601 ID=MsG0180001904.01.T01:exon:42123;Parent=MsG0180001904.01.T01
Chr1 CDS 29063746 29065043 29063746 ID=MsG0180001904.01.T01:cds;Parent=MsG0180001904.01.T01
Chr1 CDS 29060793 29060817 29060793 ID=MsG0180001904.01.T01:cds;Parent=MsG0180001904.01.T01
Chr1 CDS 29057509 29058058 29057509 ID=MsG0180001904.01.T01:cds;Parent=MsG0180001904.01.T01
Chr1 CDS 29057275 29057399 29057275 ID=MsG0180001904.01.T01:cds;Parent=MsG0180001904.01.T01
Chr1 CDS 29056601 29056840 29056601 ID=MsG0180001904.01.T01:cds;Parent=MsG0180001904.01.T01
Gene Sequence

>MsG0180001904.01.T01

ATGGCTTCTTATAAGAAACCACGTCTTAGAGATTTGGCTTTGCGTCGTTTATTATCTGTGGTGTTTCTTACTTTATGTGGTGTTTTGATATTGATATTTTTACTTGGATCAAATTCAAGTACAACTATTGAAACTAATGATTTAGAAAGGGTTGATGATGGTTCCGGTTATCGTCGCGATTTGAAGTTTACTAAGTTGCAAAACCTTCCACAGCAGAGTGATTTGTCGAAAAAGTTGGAAAAGTTGAATTTGTTGCCACCAAGGAATTTGGATTTGTATCCAAATATTGGTAAAGATGCTATCATTGTTGTTTTGTATGTTCATAACCGGCCGCAGTATCTTAAGGTGGTTGTTGAGAGTCTTGCTAAGGTTGTAGGGATTAATGAGACTTTGCTGATTGTTAGTCATGATGGTTACTTTGAGGAAATGAATAAGATCATTGGTGGTATTAGGTTTTGTCAAGTTAAACAAATATATGCTCCGTATTCGCCTCATTTGTTTCCAAATAGTTTTCCAGGGGTTTCGGTTGGTGATTGTAAGGAGAAAGATGATGCGAAAGAGAAGCATTGTGAAGGGAATCCTGATCAGTATGGGAACCATCGTTTGCCGAAGATTGTGTCGTTGAAGCATCATTGGTGGTGGATGATGAATACGGTGTGGGATGGATTGAGTGAGACGGGAGTGCATTCTGGGCATGTTCTTTTTATTGAAGAAGACCACTTTATATTTCCCAATGCGTATCGGAATTTACAGATTTTAACTAAGTTGAAGCCTATGAAATGTCCTGATTGTTATGCTGCAAATTTAGCACCTTCTGATGTGAACTCGAGAGGTGAAGAGTGGGATAGTTTAGTTGCGGAGAGAATGGGAAACATAGGTTACTCGTTTAATCGAACGGTTTGGAAAAAAATACACAATAAGGCTAAAGAATTTTGTTTCTTTGATGATTATAATTGGGATATCACTATGTGGGCGACTGTTTATCCCTCATTTGGTAGACCTGTGTACACGTTACGAGGCCCAAGGACTAGTGCTGTTCACTTTGGGAAATGTGGTTTGCATCAGGGTCAGGGGGAGAATAAGGCTTGCATTGATAACGGCATGGCGAACATTCGTGTAGAAGATCATGATAAGGTTTCGAACATTGATTCAGATTGGGATGTTCATGTCTATAAAAATCAGCCTGGTTATAAAGCCGGGTTTAAAGGTTGGGGAGGTTGGGGGGATGACAGAGACCGCCACTTATGCTTGAGCTTTGCCGACATGTATCGCTCCTCCAAAGGCACTGTATCTCCCTTGCTATCAGTGATTGATGCCGCTCAACGTATCCCTAATGCTTTTGTGAACTTGATGCGTTCAAAAAGGAAGGTCATAAAGGATTTTATCCTAAGAGATCGTAGAGGAAGAGATTGGCATGTCAAAGCTCGTCGTATTGGCGATGAGCTTTATTTTGACGATGGCTGGAAGCAATTTAGAGGGGAAAATTCTTTAGAGGAGGATGATTTCCTTGTTTTTACACATATTGAAAACAACATATTCAGGTTCAAAATTCTTGAACTATCATCAATGTGTGAAAAGAAGAAGGTAAGTGACATGGAGGAAAATAACAATATGGAGGATGAGGAAGAGGACGGTGATGGTGATGATGATGATGACGATGACGAGGATGATGATTATGATTTTGATGCTGCTGCTGCTGCTGATGATGATATTATGGCAGAGGAAGAAGATCATGATGATGATATTATGGCAGAGGAAGAACATCATGATACCGATGATGATGATGGTGATGACGACGACGAGAATGAAAGAATGTACAAGGAAATTAGTAGAAGTAAACATCAACATTGTAGAACCTGCAAGTGCAAAGCTGCGGACATTGGGAGCAGCTCTGCACATTCAAAACCTGAAGACGACGAAATTGATGCTGAAATGTATATTCAACCCGGAAATCCACACTTCATTGCAAAATATATTCATTCCAGACCTAATGAATTGGACATTCAGAGCAATGACTTAGCAGCCTATCATCACATCTTGCCACAAATAAGCACAACACATATCGAAAAGAGAGGCCAAGTACGTACGTGGAGAGATGGTCGAGTACGTGTGCTAGGGTGGGAAGATTTTTGTAGAAAGTGCAATATCACAGAAAATGATAGTTGCTTATGCGAGATTGTGCTGCGTGAAGATGGAAAAATCGAAATGTTAAGGGTGCACATTGTTAGGAAGGAATGA

Protein sequence

>MsG0180001904.01.T01

MASYKKPRLRDLALRRLLSVVFLTLCGVLILIFLLGSNSSTTIETNDLERVDDGSGYRRDLKFTKLQNLPQQSDLSKKLEKLNLLPPRNLDLYPNIGKDAIIVVLYVHNRPQYLKVVVESLAKVVGINETLLIVSHDGYFEEMNKIIGGIRFCQVKQIYAPYSPHLFPNSFPGVSVGDCKEKDDAKEKHCEGNPDQYGNHRLPKIVSLKHHWWWMMNTVWDGLSETGVHSGHVLFIEEDHFIFPNAYRNLQILTKLKPMKCPDCYAANLAPSDVNSRGEEWDSLVAERMGNIGYSFNRTVWKKIHNKAKEFCFFDDYNWDITMWATVYPSFGRPVYTLRGPRTSAVHFGKCGLHQGQGENKACIDNGMANIRVEDHDKVSNIDSDWDVHVYKNQPGYKAGFKGWGGWGDDRDRHLCLSFADMYRSSKGTVSPLLSVIDAAQRIPNAFVNLMRSKRKVIKDFILRDRRGRDWHVKARRIGDELYFDDGWKQFRGENSLEEDDFLVFTHIENNIFRFKILELSSMCEKKKVSDMEENNNMEDEEEDGDGDDDDDDDEDDDYDFDAAAAADDDIMAEEEDHDDDIMAEEEHHDTDDDDGDDDDENERMYKEISRSKHQHCRTCKCKAADIGSSSAHSKPEDDEIDAEMYIQPGNPHFIAKYIHSRPNELDIQSNDLAAYHHILPQISTTHIEKRGQVRTWRDGRVRVLGWEDFCRKCNITENDSCLCEIVLREDGKIEMLRVHIVRKE*