AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044902.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044902.01.T01 MTR_2g046130 85.597 243 35 0 61 303 1 243 1.19e-132 389
MsG0880044902.01.T01 MTR_4g123880 64.198 243 82 3 61 303 1 238 2.25e-99 302
MsG0880044902.01.T01 MTR_4g123880 64.198 243 82 3 61 303 1 238 4.09e-99 303
MsG0880044902.01.T01 MTR_7g111690 49.804 255 115 5 61 303 1 254 2.02e-66 218
MsG0880044902.01.T01 MTR_7g111690 49.804 255 115 5 61 303 1 254 2.15e-66 217
MsG0880044902.01.T01 MTR_5g091380 48.198 222 96 8 65 278 7 217 3.39e-42 154
MsG0880044902.01.T01 MTR_3g047890 40.496 242 133 5 65 303 7 240 1.00e-40 150
MsG0880044902.01.T01 MTR_7g078730 33.803 213 114 5 65 277 9 194 2.82e-25 107
MsG0880044902.01.T01 MTR_8g028695 35.945 217 93 7 62 277 6 177 3.31e-21 95.1
MsG0880044902.01.T01 MTR_8g101230 95.745 47 2 0 279 325 153 199 1.33e-20 91.3
MsG0880044902.01.T01 MTR_8g101230 95.745 47 2 0 279 325 153 199 1.49e-20 91.3
MsG0880044902.01.T01 MTR_8g101230 95.745 47 2 0 279 325 153 199 1.56e-20 90.5
MsG0880044902.01.T01 MTR_5g017080 30.180 222 130 5 58 277 2 200 4.79e-18 85.1
MsG0880044902.01.T01 MTR_5g017080 30.180 222 130 5 58 277 2 200 8.27e-18 85.1
MsG0880044902.01.T01 MTR_3g116590 55.556 54 24 0 224 277 114 167 8.96e-13 69.7
MsG0880044902.01.T01 MTR_3g116590 55.556 54 24 0 224 277 114 167 1.17e-12 69.3
MsG0880044902.01.T01 MTR_4g069970 51.786 56 27 0 222 277 118 173 9.34e-12 66.6
MsG0880044902.01.T01 MTR_4g069970 51.786 56 27 0 222 277 118 173 1.02e-11 66.2
MsG0880044902.01.T01 MTR_4g069970 40.964 83 49 0 222 304 118 200 1.18e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044902.01.T01 AT5G18500 48.869 221 89 9 61 278 1 200 9.01e-54 184
MsG0880044902.01.T01 AT5G18500 48.869 221 89 9 61 278 1 200 9.01e-54 184
MsG0880044902.01.T01 AT5G18500 48.869 221 89 9 61 278 1 200 9.01e-54 184
MsG0880044902.01.T01 AT5G18500 48.869 221 89 9 61 278 1 200 9.01e-54 184
MsG0880044902.01.T01 AT5G18500 48.869 221 89 9 61 278 1 200 9.01e-54 184
MsG0880044902.01.T01 AT5G18500 48.869 221 89 9 61 278 1 200 9.01e-54 184
MsG0880044902.01.T01 AT1G56720 46.154 247 120 6 61 303 1 238 5.00e-50 175
MsG0880044902.01.T01 AT1G56720 46.154 247 120 6 61 303 1 238 5.00e-50 175
MsG0880044902.01.T01 AT1G56720 46.154 247 120 6 61 303 1 238 5.00e-50 175
MsG0880044902.01.T01 AT1G56720 46.154 247 120 6 61 303 1 238 5.00e-50 175
MsG0880044902.01.T01 AT3G59110 44.841 252 121 9 63 303 5 249 5.90e-50 175
MsG0880044902.01.T01 AT2G42960 45.749 247 119 10 63 303 5 242 8.63e-46 160
MsG0880044902.01.T01 AT2G42960 45.749 247 119 10 63 303 5 242 9.40e-45 160
MsG0880044902.01.T01 AT2G42960 45.749 247 119 10 63 303 5 242 9.40e-45 160
MsG0880044902.01.T01 AT2G42960 45.749 247 119 10 63 303 5 242 9.40e-45 160
MsG0880044902.01.T01 AT2G42960 45.749 247 119 10 63 303 5 242 9.40e-45 160
MsG0880044902.01.T01 AT3G17420 44.749 219 87 9 61 277 1 187 2.35e-40 148
MsG0880044902.01.T01 AT1G09440 43.913 230 110 6 77 303 3 216 2.92e-38 142
MsG0880044902.01.T01 AT1G09440 43.913 230 110 6 77 303 3 216 2.92e-38 142
MsG0880044902.01.T01 AT4G01330 36.744 215 104 5 65 277 11 195 2.21e-32 127
MsG0880044902.01.T01 AT4G01330 36.744 215 104 5 65 277 11 195 2.28e-32 127
MsG0880044902.01.T01 AT4G01330 36.744 215 104 5 65 277 11 195 2.77e-32 126
MsG0880044902.01.T01 AT1G01540 38.710 217 97 6 62 277 6 187 2.88e-31 122
MsG0880044902.01.T01 AT1G01540 39.171 217 96 7 62 277 6 187 5.93e-31 122
MsG0880044902.01.T01 AT4G02630 63.158 57 21 0 221 277 139 195 2.49e-17 83.6
MsG0880044902.01.T01 AT4G34500 32.243 214 91 8 70 277 13 178 8.36e-15 75.9

Find 97 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCACCTTCAACCATCTTTC+TGG 0.158665 8:-51172529 None:intergenic
TTTGCAAAAGACATTATTAT+TGG 0.219336 8:+51176117 MsG0880044902.01.T01:CDS
ATTGAAAGCATGGGTATTAA+TGG 0.226541 8:+51175618 MsG0880044902.01.T01:CDS
CTCACCTTGGTTGGGGCCAC+TGG 0.250309 8:+51176058 MsG0880044902.01.T01:CDS
ATTATTGAGGAGTTTCTTAA+TGG 0.254003 8:-51176196 None:intergenic
TTAGGAGCATATCGGCTTAT+AGG 0.259018 8:+51175980 MsG0880044902.01.T01:CDS
GTCTTCTGGTCCAGTTAAAT+TGG 0.268659 8:+51177949 MsG0880044902.01.T01:CDS
CTGAATTCTCTCACCTTGGT+TGG 0.290952 8:+51176049 MsG0880044902.01.T01:CDS
TGAATTCTCTCACCTTGGTT+GGG 0.293863 8:+51176050 MsG0880044902.01.T01:CDS
TTTATTTGACAACAACAAAA+TGG 0.295901 8:+51175549 MsG0880044902.01.T01:CDS
ATGTTTGCAGATAGCATTCT+TGG 0.305934 8:+51178094 MsG0880044902.01.T01:intron
ATTATTGGAGAAGGTGGTTA+TGG 0.341276 8:+51176132 MsG0880044902.01.T01:CDS
ACTAGCGATGTAACGTCTTC+TGG 0.347637 8:+51177935 MsG0880044902.01.T01:CDS
GTGGTGTGTACCGGCGAAGA+TGG 0.349253 8:+51172479 MsG0880044902.01.T01:CDS
TCCGCGTCATCGCCGTGTTC+TGG 0.349477 8:+51176021 MsG0880044902.01.T01:CDS
CTTCTGAAATAGATAGAATA+TGG 0.354364 8:-51175747 None:intergenic
GGGCCACTGGTTTACGTTAA+GGG 0.362949 8:+51176071 MsG0880044902.01.T01:CDS
TGGAGATCTGCCAATTTAAC+TGG 0.367952 8:-51177959 None:intergenic
CTGGCGACCTCAACTCTTCC+CGG 0.394504 8:-51172510 None:intergenic
CACGGCGATGACGCGGATAT+AGG 0.409649 8:-51176015 None:intergenic
CTTATCATTCAAGCTCATAA+AGG 0.411866 8:-51175827 None:intergenic
CAACCAAGGTGAGAGAATTC+AGG 0.412791 8:-51176048 None:intergenic
ATGAGCTTGAATGATAAGTT+TGG 0.414102 8:+51175832 MsG0880044902.01.T01:CDS
GGGGCCACTGGTTTACGTTA+AGG 0.414970 8:+51176070 MsG0880044902.01.T01:CDS
TTCCTGCACTAGTTTACTAA+TGG 0.416038 8:-51172421 None:intergenic
TTGAAAGCATGGGTATTAAT+GGG 0.417741 8:+51175619 MsG0880044902.01.T01:CDS
GACATTATTATTGGAGAAGG+TGG 0.422046 8:+51176126 MsG0880044902.01.T01:CDS
GAATTCTCTCACCTTGGTTG+GGG 0.427599 8:+51176051 MsG0880044902.01.T01:CDS
ATTAGATCTCTCTACTGAAA+TGG 0.428959 8:+51172395 MsG0880044902.01.T01:CDS
CTGCCTGAATTCTCTCACCT+TGG 0.432420 8:+51176045 MsG0880044902.01.T01:CDS
ACCTATAGGTTGCAAGTTCA+AGG 0.434698 8:-51176095 None:intergenic
GATTGAAATTCGAATATAAT+CGG 0.436592 8:-51178214 None:intergenic
GTTGCATCCACACCAAAGTT+CGG 0.439990 8:-51177914 None:intergenic
GGAGATAATAGTAGTCAATC+AGG 0.447697 8:+51175895 MsG0880044902.01.T01:CDS
CACACTAATGCCCCTCATCA+TGG 0.454475 8:-51178302 None:intergenic
TTGCATCCACACCAAAGTTC+GGG 0.455855 8:-51177913 None:intergenic
GCGAAGATGGGTTTCACGCC+GGG 0.462415 8:+51172492 MsG0880044902.01.T01:CDS
GTTGGAAAGAGCTGCAAACT+TGG 0.470657 8:+51177886 MsG0880044902.01.T01:intron
ATCGAGGTCAACGTATCAAC+GGG 0.473804 8:+51176163 MsG0880044902.01.T01:CDS
GCCAAGTGATTACCTTCGTC+AGG 0.475567 8:-51178118 None:intergenic
AAGGGCGGCATGCTTCCTCT+TGG 0.476720 8:+51175724 MsG0880044902.01.T01:CDS
GAGAGATCTAATAATTGCAT+TGG 0.477522 8:-51172384 None:intergenic
ACCTTGAACTTGCAACCTAT+AGG 0.484185 8:+51176094 MsG0880044902.01.T01:CDS
GATCTGAATGGCTCTCAGTC+AGG 0.486961 8:+51175940 MsG0880044902.01.T01:CDS
GTATTAATGGGAATAGTGGT+TGG 0.491829 8:+51175631 MsG0880044902.01.T01:CDS
TGGCATCTGATCTAAATTCA+AGG 0.494331 8:+51175569 MsG0880044902.01.T01:CDS
ACGGGTCACATGTTTCGAAC+TGG 0.508360 8:+51172454 MsG0880044902.01.T01:CDS
AACTTGGTTGTCCCGAACTT+TGG 0.511711 8:+51177902 MsG0880044902.01.T01:CDS
TAATAGCTTACAAATTATTG+AGG 0.512738 8:-51176209 None:intergenic
TGCAGGAAGGTAGCGACGAC+GGG 0.513816 8:+51172436 MsG0880044902.01.T01:CDS
ATGGGTATTAATGGGAATAG+TGG 0.513957 8:+51175627 MsG0880044902.01.T01:CDS
GGCCATTAGTAAACTAGTGC+AGG 0.515629 8:+51172419 MsG0880044902.01.T01:CDS
AGCAACATTGGACCTGCTGC+AGG 0.516938 8:+51177992 MsG0880044902.01.T01:CDS
AAAGACATTATTATTGGAGA+AGG 0.523442 8:+51176123 MsG0880044902.01.T01:CDS
CAGAGTATATTGAGCAACAT+TGG 0.524658 8:+51177980 MsG0880044902.01.T01:CDS
AGTTGAGGTCGCCAGAAAGA+TGG 0.525933 8:+51172518 MsG0880044902.01.T01:CDS
CAATGTTGCTCAATATACTC+TGG 0.526288 8:-51177979 None:intergenic
GAACTGGTGGTGGTGTGTAC+CGG 0.532999 8:+51172470 MsG0880044902.01.T01:CDS
TCGAATAATCATCCGCAGAA+TGG 0.533606 8:+51175802 MsG0880044902.01.T01:CDS
GTTCATTATAATCATCCTTG+TGG 0.534067 8:+51175657 MsG0880044902.01.T01:CDS
GTCGCCAGAAAGATGGTTGA+AGG 0.541367 8:+51172525 MsG0880044902.01.T01:CDS
ACACTAATGCCCCTCATCAT+GGG 0.545928 8:-51178301 None:intergenic
TGGTGTGTACCGGCGAAGAT+GGG 0.550821 8:+51172480 MsG0880044902.01.T01:CDS
CACATGTTTCGAACTGGTGG+TGG 0.560029 8:+51172460 MsG0880044902.01.T01:CDS
TGTAACTTATTACCTGCAGC+AGG 0.562977 8:-51178004 None:intergenic
TTAAGAAAGAAGTCTAGAAG+AGG 0.564848 8:+51175700 MsG0880044902.01.T01:CDS
TTTCACGCCGGGAAGAGTTG+AGG 0.567844 8:+51172503 MsG0880044902.01.T01:CDS
ACCAGAACACGGCGATGACG+CGG 0.568873 8:-51176022 None:intergenic
TGGTGACGGCAATTCTCGAA+AGG 0.571636 8:+51175852 MsG0880044902.01.T01:CDS
AAAACAGTATCCCATGATGA+GGG 0.573602 8:+51178291 MsG0880044902.01.T01:CDS
TTGAATGATAAGTTTGGTGA+CGG 0.577036 8:+51175838 MsG0880044902.01.T01:CDS
AAAGAAGTCTAGAAGAGGCA+AGG 0.577807 8:+51175705 MsG0880044902.01.T01:CDS
AAGAAGTCTAGAAGAGGCAA+GGG 0.581001 8:+51175706 MsG0880044902.01.T01:CDS
GGCGAAGATGGGTTTCACGC+CGG 0.589028 8:+51172491 MsG0880044902.01.T01:CDS
TAAAACAGTATCCCATGATG+AGG 0.602445 8:+51178290 MsG0880044902.01.T01:CDS
GTGCAGGAAGGTAGCGACGA+CGG 0.606843 8:+51172435 MsG0880044902.01.T01:CDS
CGTTTAGAGAAAGATCTGAA+TGG 0.607298 8:+51175928 MsG0880044902.01.T01:CDS
AAGTCTAGAAGAGGCAAGGG+CGG 0.608384 8:+51175709 MsG0880044902.01.T01:CDS
TATCGAGGTCAACGTATCAA+CGG 0.618555 8:+51176162 MsG0880044902.01.T01:CDS
GGCGTGAAACCCATCTTCGC+CGG 0.624318 8:-51172489 None:intergenic
GGTCACATGTTTCGAACTGG+TGG 0.628147 8:+51172457 MsG0880044902.01.T01:CDS
AGCATTCTTGGTCCTGACGA+AGG 0.637709 8:+51178106 MsG0880044902.01.T01:CDS
GGTTGTCCCGAACTTTGGTG+TGG 0.640547 8:+51177907 MsG0880044902.01.T01:CDS
TAAACCAGTGGCCCCAACCA+AGG 0.641071 8:-51176062 None:intergenic
GGAGTTTCTTAATGGCCACA+AGG 0.650174 8:-51176188 None:intergenic
ATTAGTAAACTAGTGCAGGA+AGG 0.652481 8:+51172423 MsG0880044902.01.T01:CDS
ACGTATCAACGGGAACCTTG+TGG 0.659961 8:+51176173 MsG0880044902.01.T01:CDS
ATAGATAGAATATGGCCAAG+AGG 0.665254 8:-51175739 None:intergenic
AGATCTCTCTACTGAAATGG+CGG 0.667021 8:+51172398 MsG0880044902.01.T01:CDS
CTCATAAAGGAACCATTCTG+CGG 0.670213 8:-51175814 None:intergenic
AAACAGTATCCCATGATGAG+GGG 0.674950 8:+51178292 MsG0880044902.01.T01:CDS
CAGTCAGGTGAAGATAGCGG+TGG 0.675174 8:+51175955 MsG0880044902.01.T01:CDS
AATTCAGGCAGACCAGAACA+CGG 0.683900 8:-51176033 None:intergenic
GGTTATGGAGTTGTCTATCG+AGG 0.691177 8:+51176147 MsG0880044902.01.T01:CDS
TCTCAGTCAGGTGAAGATAG+CGG 0.693976 8:+51175952 MsG0880044902.01.T01:CDS
GACATAATGATAGCACCACA+AGG 0.695167 8:-51175672 None:intergenic
GGTCCCTTAACGTAAACCAG+TGG 0.712329 8:-51176074 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCAAAACTAAAAAATAA+AGG - Chr8:51176257-51176276 None:intergenic 10.0%
!! ACATAATAATACTTATTATA+TGG + Chr8:51176730-51176749 MsG0880044902.01.T01:intron 10.0%
!! ATATATATTATAACTTAACA+TGG + Chr8:51176979-51176998 MsG0880044902.01.T01:intron 10.0%
!! TATAATTCTTATAAATCAAA+AGG - Chr8:51174467-51174486 None:intergenic 10.0%
!!! AAAAACCATTTTAAAAAAAT+GGG - Chr8:51177230-51177249 None:intergenic 10.0%
!!! TTTGCTTTTTAAAATAATAA+CGG - Chr8:51173454-51173473 None:intergenic 10.0%
!! AACATGGAAAAAAAAAAAAA+AGG + Chr8:51176995-51177014 MsG0880044902.01.T01:intron 15.0%
!! ACTAAGATATATAAAATTCT+AGG - Chr8:51177353-51177372 None:intergenic 15.0%
!! GTTAAGTTATAATATATATG+AGG - Chr8:51176978-51176997 None:intergenic 15.0%
!! GTTATTTATTATTAGATCTT+TGG - Chr8:51173126-51173145 None:intergenic 15.0%
!! TATATAACATGATCAATAAT+AGG - Chr8:51176494-51176513 None:intergenic 15.0%
!!! CAAAAACCATTTTAAAAAAA+TGG - Chr8:51177231-51177250 None:intergenic 15.0%
!!! TGTTAATGAGAATTTTTAAT+TGG + Chr8:51176762-51176781 MsG0880044902.01.T01:intron 15.0%
!!! TTGTTTGTAGTAATAATTTT+CGG + Chr8:51173544-51173563 MsG0880044902.01.T01:intron 15.0%
!! AAAAAGTTGACACAAATATA+AGG - Chr8:51176561-51176580 None:intergenic 20.0%
!! AAAAGTTGACACAAATATAA+GGG - Chr8:51176560-51176579 None:intergenic 20.0%
!! AAAGATGTGAATGTTTATTT+AGG - Chr8:51172889-51172908 None:intergenic 20.0%
!! AACATGTTTAATACTTACTT+TGG + Chr8:51173152-51173171 MsG0880044902.01.T01:intron 20.0%
!! AAGATGTGAATGTTTATTTA+GGG - Chr8:51172888-51172907 None:intergenic 20.0%
!! AATCAAAAATCAAATCAATC+TGG + Chr8:51172563-51172582 MsG0880044902.01.T01:intron 20.0%
!! AATGTATGATATTAGCAAAT+AGG - Chr8:51176339-51176358 None:intergenic 20.0%
!! ACAATATGATCACAAAATTA+CGG + Chr8:51173679-51173698 MsG0880044902.01.T01:intron 20.0%
!! ATCAAAAATCAAATCAATCT+GGG + Chr8:51172564-51172583 MsG0880044902.01.T01:intron 20.0%
!! ATTACAATTACACAAATGAA+AGG - Chr8:51175149-51175168 None:intergenic 20.0%
!! ATTATTAGATCTTTGGTATA+CGG - Chr8:51173119-51173138 None:intergenic 20.0%
!! CACACTAAATTAAATGATAT+GGG - Chr8:51174138-51174157 None:intergenic 20.0%
!! CATGTTACCATAAAATATTT+AGG - Chr8:51177707-51177726 None:intergenic 20.0%
!! GATTGAAATTCGAATATAAT+CGG - Chr8:51178217-51178236 None:intergenic 20.0%
!! TAATAGCTTACAAATTATTG+AGG - Chr8:51176212-51176231 None:intergenic 20.0%
!! TAGTGATTTCATGATATATA+AGG + Chr8:51177130-51177149 MsG0880044902.01.T01:intron 20.0%
!! TATTTATATGTGAGAATCAT+AGG - Chr8:51172845-51172864 None:intergenic 20.0%
!! TCAAATAAATCTGCAAATAT+CGG - Chr8:51175538-51175557 None:intergenic 20.0%
!! TCACACTAAATTAAATGATA+TGG - Chr8:51174139-51174158 None:intergenic 20.0%
!! TTATATATCTTAGTGATTTG+AGG + Chr8:51177359-51177378 MsG0880044902.01.T01:intron 20.0%
!! TTTATTACAGACAATTGTTA+GGG + Chr8:51174649-51174668 MsG0880044902.01.T01:intron 20.0%
!! TTTATTTGACAACAACAAAA+TGG + Chr8:51175549-51175568 MsG0880044902.01.T01:CDS 20.0%
!! TTTGCAAAAGACATTATTAT+TGG + Chr8:51176117-51176136 MsG0880044902.01.T01:CDS 20.0%
!!! AAAGCAAGAAACTTTAATTT+TGG - Chr8:51173985-51174004 None:intergenic 20.0%
!!! AACTCACTTTTAACTAAAAT+CGG - Chr8:51174555-51174574 None:intergenic 20.0%
!!! AACTTTAATTTTGGAGAAAA+AGG - Chr8:51173976-51173995 None:intergenic 20.0%
!!! AAGATATTAAGGAATAGTTT+TGG + Chr8:51174438-51174457 MsG0880044902.01.T01:intron 20.0%
!!! ACTTTAATTTTGGAGAAAAA+GGG - Chr8:51173975-51173994 None:intergenic 20.0%
!!! ATATAAGGTTTTGATGTTTA+TGG + Chr8:51177145-51177164 MsG0880044902.01.T01:intron 20.0%
!!! ATTAAGTTGAATGTAGAATA+TGG + Chr8:51174007-51174026 MsG0880044902.01.T01:intron 20.0%
!!! ATTTCGACCTAAATATTTTA+TGG + Chr8:51177697-51177716 MsG0880044902.01.T01:intron 20.0%
!!! ATTTTACTGCAAAGATATTA+AGG + Chr8:51174427-51174446 MsG0880044902.01.T01:intron 20.0%
!!! CATTTAATTTAGTGTGAATA+AGG + Chr8:51174142-51174161 MsG0880044902.01.T01:intron 20.0%
!!! TATGACAAGTTTTAAATTGA+AGG + Chr8:51176401-51176420 MsG0880044902.01.T01:intron 20.0%
!!! TCAAAGAAAACAAATGTTTT+TGG + Chr8:51175595-51175614 MsG0880044902.01.T01:CDS 20.0%
!!! TGTTTATGTGTTATCTTTTT+TGG + Chr8:51177427-51177446 MsG0880044902.01.T01:intron 20.0%
!!! TTATGAACCAAGTTTTATAA+CGG + Chr8:51176275-51176294 MsG0880044902.01.T01:intron 20.0%
!!! TTCAATTTTCGTTTTTGATT+TGG + Chr8:51173935-51173954 MsG0880044902.01.T01:intron 20.0%
!!! TTGTTACTGAAATTTTTGAA+TGG + Chr8:51175339-51175358 MsG0880044902.01.T01:intron 20.0%
!!! TTTGTATTTTTCAATGTCTT+TGG + Chr8:51175110-51175129 MsG0880044902.01.T01:intron 20.0%
! AAAGACATTATTATTGGAGA+AGG + Chr8:51176123-51176142 MsG0880044902.01.T01:CDS 25.0%
! AATAGTTGGTTACAATTACA+AGG + Chr8:51175052-51175071 MsG0880044902.01.T01:intron 25.0%
! AGATGTGAATGTTTATTTAG+GGG - Chr8:51172887-51172906 None:intergenic 25.0%
! ATAGTTGGTTACAATTACAA+GGG + Chr8:51175053-51175072 MsG0880044902.01.T01:intron 25.0%
! ATATCCATCATTTCATAATC+AGG - Chr8:51174622-51174641 None:intergenic 25.0%
! ATCAAAAAACAACATTTCTG+AGG - Chr8:51174393-51174412 None:intergenic 25.0%
! ATTATTGAGGAGTTTCTTAA+TGG - Chr8:51176199-51176218 None:intergenic 25.0%
! CATATCATCAGAAAAGTAAT+AGG - Chr8:51178077-51178096 None:intergenic 25.0%
! CTAAAAGTTTGATTCTTTGT+TGG + Chr8:51177868-51177887 MsG0880044902.01.T01:intron 25.0%
! CTCCTTTGAATTTATTTCAA+GGG - Chr8:51177042-51177061 None:intergenic 25.0%
! GATTGAGAATAAGAATAAAG+AGG + Chr8:51174239-51174258 MsG0880044902.01.T01:intron 25.0%
! GTTAAACTTAATCACTAGTT+TGG - Chr8:51173482-51173501 None:intergenic 25.0%
! GTTTATTACAGACAATTGTT+AGG + Chr8:51174648-51174667 MsG0880044902.01.T01:intron 25.0%
! TAAATAAGCAATAGAGTTAG+CGG - Chr8:51175087-51175106 None:intergenic 25.0%
! TCTCCTTTGAATTTATTTCA+AGG - Chr8:51177043-51177062 None:intergenic 25.0%
! TGCTAAAACACCAAATATAT+AGG - Chr8:51173758-51173777 None:intergenic 25.0%
! TTATTACAGACAATTGTTAG+GGG + Chr8:51174650-51174669 MsG0880044902.01.T01:intron 25.0%
! TTGAACAAAAAACTGCATTA+TGG - Chr8:51175219-51175238 None:intergenic 25.0%
!! ACGGTTATGATCTTATATTT+TGG - Chr8:51173100-51173119 None:intergenic 25.0%
!! ATTGTTTGTGTAAATTTGCT+TGG + Chr8:51175449-51175468 MsG0880044902.01.T01:intron 25.0%
!! TGAATCTGATTTGCAATTAT+GGG + Chr8:51174287-51174306 MsG0880044902.01.T01:intron 25.0%
!! TGCTAGATTTCTTCATATTT+TGG + Chr8:51177737-51177756 MsG0880044902.01.T01:intron 25.0%
!! TTGAATCTGATTTGCAATTA+TGG + Chr8:51174286-51174305 MsG0880044902.01.T01:intron 25.0%
!!! AAAAGGGTTTTAGCAATTAA+AGG + Chr8:51176672-51176691 MsG0880044902.01.T01:intron 25.0%
!!! ATTAGTCTTATAGAATCATG+GGG + Chr8:51176457-51176476 MsG0880044902.01.T01:intron 25.0%
!!! ATTATGCGTAGCAATTTTTT+TGG + Chr8:51173274-51173293 MsG0880044902.01.T01:intron 25.0%
!!! ATTTTGTTTCTTGATTCCAA+AGG + Chr8:51176893-51176912 MsG0880044902.01.T01:intron 25.0%
!!! CATTAGTCTTATAGAATCAT+GGG + Chr8:51176456-51176475 MsG0880044902.01.T01:intron 25.0%
!!! CTTCTGAAATAGATAGAATA+TGG - Chr8:51175750-51175769 None:intergenic 25.0%
!!! GATGTCCCATTTTTTTAAAA+TGG + Chr8:51177222-51177241 MsG0880044902.01.T01:intron 25.0%
!!! GTTTTGATTCAAACAAAGAA+TGG + Chr8:51175874-51175893 MsG0880044902.01.T01:CDS 25.0%
!!! TAGTTTTACATTTGTGTGTT+TGG + Chr8:51174496-51174515 MsG0880044902.01.T01:intron 25.0%
!!! TTCATATTTTGGAAATCACT+TGG + Chr8:51177748-51177767 MsG0880044902.01.T01:intron 25.0%
AAAACAAGCTTATGACATGT+TGG + Chr8:51173620-51173639 MsG0880044902.01.T01:intron 30.0%
AAACGAACAGGACATAAATT+TGG - Chr8:51177571-51177590 None:intergenic 30.0%
AAAGGGTTCGATTAAATTCT+AGG - Chr8:51172610-51172629 None:intergenic 30.0%
AACAATGATTGAAAACGAAC+AGG - Chr8:51177583-51177602 None:intergenic 30.0%
AACGAACAGGACATAAATTT+GGG - Chr8:51177570-51177589 None:intergenic 30.0%
AAGTTACAGAGAATCAAGAT+AGG + Chr8:51173903-51173922 MsG0880044902.01.T01:intron 30.0%
AATCACACCGTTATAAAACT+TGG - Chr8:51176285-51176304 None:intergenic 30.0%
ACGATACATTCCAATATTTG+TGG + Chr8:51173500-51173519 MsG0880044902.01.T01:intron 30.0%
ACTATGATTCATAGCAAGTT+TGG + Chr8:51174787-51174806 MsG0880044902.01.T01:intron 30.0%
AGAACAACAATTTGGAGATT+GGG + Chr8:51172750-51172769 MsG0880044902.01.T01:intron 30.0%
AGATCTCAACACAGTTAAAA+GGG - Chr8:51178052-51178071 None:intergenic 30.0%
ATAAGTACTTTGTAACACCT+GGG - Chr8:51177668-51177687 None:intergenic 30.0%
ATCGGAGTTGAAAAATTAGA+AGG - Chr8:51175520-51175539 None:intergenic 30.0%
ATGAGCTTGAATGATAAGTT+TGG + Chr8:51175832-51175851 MsG0880044902.01.T01:CDS 30.0%
ATTAGATCTCTCTACTGAAA+TGG + Chr8:51172395-51172414 MsG0880044902.01.T01:CDS 30.0%
CAAGAAACAAAATCCAATAG+CGG - Chr8:51176886-51176905 None:intergenic 30.0%
CATACGAAGTGATTTATGTT+TGG + Chr8:51174576-51174595 MsG0880044902.01.T01:intron 30.0%
CATTTCCAGATAACAAAAGA+GGG - Chr8:51175253-51175272 None:intergenic 30.0%
CCATGATTCTATAAGACTAA+TGG - Chr8:51176458-51176477 None:intergenic 30.0%
CTACAAACAATAACAAAGAG+AGG - Chr8:51173534-51173553 None:intergenic 30.0%
CTATGATTCATAGCAAGTTT+GGG + Chr8:51174788-51174807 MsG0880044902.01.T01:intron 30.0%
CTTATCATTCAAGCTCATAA+AGG - Chr8:51175830-51175849 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - Chr8:51173325-51173344 None:intergenic 30.0%
GACCCTTGAAATAAATTCAA+AGG + Chr8:51177037-51177056 MsG0880044902.01.T01:intron 30.0%
GAGAAACTTAATCATACATC+TGG - Chr8:51175365-51175384 None:intergenic 30.0%
GATGTGAATGTTTATTTAGG+GGG - Chr8:51172886-51172905 None:intergenic 30.0%
GCTTCCATAAAGCTATTTAT+AGG + Chr8:51174975-51174994 MsG0880044902.01.T01:intron 30.0%
GTTCATTATAATCATCCTTG+TGG + Chr8:51175657-51175676 MsG0880044902.01.T01:CDS 30.0%
GTTTATGGTTCAGAAAATGT+TGG + Chr8:51177160-51177179 MsG0880044902.01.T01:intron 30.0%
TAACAAAAGAGGGAGATAAA+TGG - Chr8:51175243-51175262 None:intergenic 30.0%
TAGAATTTAATCGAACCCTT+TGG + Chr8:51172609-51172628 MsG0880044902.01.T01:intron 30.0%
TATAGAATCATGGGGATATA+AGG + Chr8:51176465-51176484 MsG0880044902.01.T01:intron 30.0%
TATATAAAATTCTAGGCTGC+AGG - Chr8:51177346-51177365 None:intergenic 30.0%
TATCTATTTATTTACCCGAC+TGG + Chr8:51177842-51177861 MsG0880044902.01.T01:intron 30.0%
TCACTGGATTTGTAATTGTT+TGG + Chr8:51174062-51174081 MsG0880044902.01.T01:intron 30.0%
TCATTTCCAGATAACAAAAG+AGG - Chr8:51175254-51175273 None:intergenic 30.0%
TTAAGAAAGAAGTCTAGAAG+AGG + Chr8:51175700-51175719 MsG0880044902.01.T01:CDS 30.0%
TTCATTTATGCTCGATTAGT+TGG + Chr8:51175178-51175197 MsG0880044902.01.T01:intron 30.0%
TTGTAGCCATCAGATTAAAA+AGG - Chr8:51172816-51172835 None:intergenic 30.0%
! AATGTCTTTTGCAAACCTAT+AGG - Chr8:51176112-51176131 None:intergenic 30.0%
! ATTGAAAGCATGGGTATTAA+TGG + Chr8:51175618-51175637 MsG0880044902.01.T01:CDS 30.0%
! GAGAGTGATTTGTACATTAT+AGG + Chr8:51177517-51177536 MsG0880044902.01.T01:intron 30.0%
! GTCAGTAACTCTTTAATTTC+TGG + Chr8:51174084-51174103 MsG0880044902.01.T01:intron 30.0%
! TCGTTTTCAATCATTGTTTC+TGG + Chr8:51177585-51177604 MsG0880044902.01.T01:intron 30.0%
! TGTAGAAGCTCTAATGAAAA+GGG + Chr8:51176656-51176675 MsG0880044902.01.T01:intron 30.0%
! TTCTGTTGATAGATTTGAGA+AGG - Chr8:51173885-51173904 None:intergenic 30.0%
! TTGAAAGCATGGGTATTAAT+GGG + Chr8:51175619-51175638 MsG0880044902.01.T01:CDS 30.0%
! TTGAATGATAAGTTTGGTGA+CGG + Chr8:51175838-51175857 MsG0880044902.01.T01:CDS 30.0%
! TTGTAGAAGCTCTAATGAAA+AGG + Chr8:51176655-51176674 MsG0880044902.01.T01:intron 30.0%
! TTTTCAATGTCTTTGGTTGT+TGG + Chr8:51175117-51175136 MsG0880044902.01.T01:intron 30.0%
!! CCATTAGTCTTATAGAATCA+TGG + Chr8:51176455-51176474 MsG0880044902.01.T01:intron 30.0%
!! CGTTTTCAATCATTGTTTCT+GGG + Chr8:51177586-51177605 MsG0880044902.01.T01:intron 30.0%
!! GTTGGTCTTACCTATATATT+TGG + Chr8:51173745-51173764 MsG0880044902.01.T01:intron 30.0%
!!! ATGTTTTTGGATTGAAAGCA+TGG + Chr8:51175608-51175627 MsG0880044902.01.T01:CDS 30.0%
!!! TGTTTTTGGATTGAAAGCAT+GGG + Chr8:51175609-51175628 MsG0880044902.01.T01:CDS 30.0%
AAAACAGTATCCCATGATGA+GGG + Chr8:51178291-51178310 MsG0880044902.01.T01:CDS 35.0%
AAAGCGTAAAAGAGAATGGA+AGG + Chr8:51172688-51172707 MsG0880044902.01.T01:intron 35.0%
AAGGAGATGAGAAAGAAACT+AGG + Chr8:51177056-51177075 MsG0880044902.01.T01:intron 35.0%
AAGGCTGCAATAAACTACTA+AGG - Chr8:51176238-51176257 None:intergenic 35.0%
AAGGGCTGAGATTAAAAGAT+GGG - Chr8:51172793-51172812 None:intergenic 35.0%
AATTTAATCGAACCCTTTGG+TGG + Chr8:51172612-51172631 MsG0880044902.01.T01:intron 35.0%
ACAGAGAATCAAGATAGGTT+AGG + Chr8:51173908-51173927 MsG0880044902.01.T01:intron 35.0%
ACGTGTACTTGTGAATGAAA+AGG + Chr8:51176616-51176635 MsG0880044902.01.T01:intron 35.0%
AGCCATCAGATTAAAAAGGA+AGG - Chr8:51172812-51172831 None:intergenic 35.0%
AGGAAGAACCAATTATGACA+AGG + Chr8:51177015-51177034 MsG0880044902.01.T01:intron 35.0%
AGTTGACACAAATATAAGGG+TGG - Chr8:51176557-51176576 None:intergenic 35.0%
ATAAGATCTAACACACTGCA+GGG - Chr8:51177635-51177654 None:intergenic 35.0%
ATAGATAGAATATGGCCAAG+AGG - Chr8:51175742-51175761 None:intergenic 35.0%
ATGGGTATTAATGGGAATAG+TGG + Chr8:51175627-51175646 MsG0880044902.01.T01:CDS 35.0%
ATGTTTGCAGATAGCATTCT+TGG + Chr8:51178094-51178113 MsG0880044902.01.T01:intron 35.0%
ATTAGTAAACTAGTGCAGGA+AGG + Chr8:51172423-51172442 MsG0880044902.01.T01:CDS 35.0%
ATTATTGGAGAAGGTGGTTA+TGG + Chr8:51176132-51176151 MsG0880044902.01.T01:CDS 35.0%
ATTTAATCGAACCCTTTGGT+GGG + Chr8:51172613-51172632 MsG0880044902.01.T01:intron 35.0%
ATTTGCTTGGTTGAGAAGTT+TGG + Chr8:51175462-51175481 MsG0880044902.01.T01:intron 35.0%
ATTTGGGAATACCGAGAATT+TGG + Chr8:51173206-51173225 MsG0880044902.01.T01:intron 35.0%
CAATGTTGCTCAATATACTC+TGG - Chr8:51177982-51178001 None:intergenic 35.0%
CACAGTCTTAATAGATAGCA+AGG - Chr8:51178157-51178176 None:intergenic 35.0%
CAGAGTATATTGAGCAACAT+TGG + Chr8:51177980-51177999 MsG0880044902.01.T01:CDS 35.0%
CAGATCTCAACACAGTTAAA+AGG - Chr8:51178053-51178072 None:intergenic 35.0%
CATAAGTACTTTGTAACACC+TGG - Chr8:51177669-51177688 None:intergenic 35.0%
CATAATATATGCAAGGTCTC+AGG - Chr8:51173318-51173337 None:intergenic 35.0%
CGTGAATGAGAACAACAATT+TGG + Chr8:51172742-51172761 MsG0880044902.01.T01:intron 35.0%
CGTGTACTTGTGAATGAAAA+GGG + Chr8:51176617-51176636 MsG0880044902.01.T01:intron 35.0%
CGTTTAGAGAAAGATCTGAA+TGG + Chr8:51175928-51175947 MsG0880044902.01.T01:CDS 35.0%
CTTCAATTACTCAACAATGG+AGG - Chr8:51173845-51173864 None:intergenic 35.0%
GACAACTATCTCTTAGTTCA+TGG + Chr8:51173174-51173193 MsG0880044902.01.T01:intron 35.0%
GACATTATTATTGGAGAAGG+TGG + Chr8:51176126-51176145 MsG0880044902.01.T01:CDS 35.0%
GAGAACAACAATTTGGAGAT+TGG + Chr8:51172749-51172768 MsG0880044902.01.T01:intron 35.0%
GAGCTTCAATTACTCAACAA+TGG - Chr8:51173848-51173867 None:intergenic 35.0%
GATCAAACACACCTATAGTT+CGG - Chr8:51177468-51177487 None:intergenic 35.0%
GCCATCAGATTAAAAAGGAA+GGG - Chr8:51172811-51172830 None:intergenic 35.0%
GGAGATAATAGTAGTCAATC+AGG + Chr8:51175895-51175914 MsG0880044902.01.T01:CDS 35.0%
GTAACTCACAATGATTGTGA+AGG - Chr8:51176923-51176942 None:intergenic 35.0%
GTATTAATGGGAATAGTGGT+TGG + Chr8:51175631-51175650 MsG0880044902.01.T01:CDS 35.0%
GTCTTTATCTAACTAAGCAG+TGG + Chr8:51174847-51174866 MsG0880044902.01.T01:intron 35.0%
TAAAACAGTATCCCATGATG+AGG + Chr8:51178290-51178309 MsG0880044902.01.T01:CDS 35.0%
TCATCAATCTTGTGCACTAT+AGG + Chr8:51176580-51176599 MsG0880044902.01.T01:intron 35.0%
TGATCATATTGTGACATAGC+AGG - Chr8:51173671-51173690 None:intergenic 35.0%
TGGCATCTGATCTAAATTCA+AGG + Chr8:51175569-51175588 MsG0880044902.01.T01:CDS 35.0%
TGTAGCTCTTTCATGTTCAA+TGG - Chr8:51174687-51174706 None:intergenic 35.0%
TTCATGGATACCGAGAATTT+GGG + Chr8:51173190-51173209 MsG0880044902.01.T01:intron 35.0%
TTTGGGAATACCGAGAATTT+GGG + Chr8:51173207-51173226 MsG0880044902.01.T01:intron 35.0%
! ACTATGTTTGTTGCAGCAAA+AGG + Chr8:51176359-51176378 MsG0880044902.01.T01:intron 35.0%
! AGCAATTGATAGCAGAATTG+AGG + Chr8:51177258-51177277 MsG0880044902.01.T01:intron 35.0%
! AGTTTTTCTTCGCTGCATTT+CGG + Chr8:51177489-51177508 MsG0880044902.01.T01:intron 35.0%
! ATAATTTTCGGCTCTTAGTG+TGG + Chr8:51173556-51173575 MsG0880044902.01.T01:intron 35.0%
! GAATCTAAAATGTCACTCAC+TGG + Chr8:51174046-51174065 MsG0880044902.01.T01:intron 35.0%
! GCAATTGATTCCCAAATTCT+CGG - Chr8:51173220-51173239 None:intergenic 35.0%
! GCAGGTATTTTCTACCATTA+AGG - Chr8:51177328-51177347 None:intergenic 35.0%
! GCGTCCTATAAATAGCTTTA+TGG - Chr8:51174982-51175001 None:intergenic 35.0%
! TAATTTTCGGCTCTTAGTGT+GGG + Chr8:51173557-51173576 MsG0880044902.01.T01:intron 35.0%
! TCAAACTTTTAGTGTCCAGT+CGG - Chr8:51177780-51177799 None:intergenic 35.0%
! TTCCTGCACTAGTTTACTAA+TGG - Chr8:51172424-51172443 None:intergenic 35.0%
! TTTTCATTCACAAGTACACG+TGG - Chr8:51176617-51176636 None:intergenic 35.0%
!! AATGGAGGTTTTGTGAGTTA+TGG - Chr8:51173830-51173849 None:intergenic 35.0%
!! ATGGAGGTTTTGTGAGTTAT+GGG - Chr8:51173829-51173848 None:intergenic 35.0%
!! GGAAACTTATTTTCGCATTG+CGG - Chr8:51176437-51176456 None:intergenic 35.0%
!! TATCTCCCTCTTTTGTTATC+TGG + Chr8:51175245-51175264 MsG0880044902.01.T01:intron 35.0%
!! TTGGAGAAAAAGGGTATTTG+TGG - Chr8:51173966-51173985 None:intergenic 35.0%
!! TTTGAGGAAGACTGATTTTC+CGG + Chr8:51177375-51177394 MsG0880044902.01.T01:intron 35.0%
!!! ATGCGTAGCAATTTTTTTGG+TGG + Chr8:51173277-51173296 MsG0880044902.01.T01:intron 35.0%
AAACAGTATCCCATGATGAG+GGG + Chr8:51178292-51178311 MsG0880044902.01.T01:CDS 40.0%
AAAGAAGTCTAGAAGAGGCA+AGG + Chr8:51175705-51175724 MsG0880044902.01.T01:CDS 40.0%
AAGAAGTCTAGAAGAGGCAA+GGG + Chr8:51175706-51175725 MsG0880044902.01.T01:CDS 40.0%
ACCTATAGGTTGCAAGTTCA+AGG - Chr8:51176098-51176117 None:intergenic 40.0%
ACCTTGAACTTGCAACCTAT+AGG + Chr8:51176094-51176113 MsG0880044902.01.T01:CDS 40.0%
ACTACATTTGACACACCCAA+TGG + Chr8:51176788-51176807 MsG0880044902.01.T01:intron 40.0%
AGAAAGATGGTTGAAGGTGA+GGG + Chr8:51172531-51172550 MsG0880044902.01.T01:intron 40.0%
AGATCTCTCTACTGAAATGG+CGG + Chr8:51172398-51172417 MsG0880044902.01.T01:CDS 40.0%
CAACTTCTTCATGTCAACTC+CGG - Chr8:51177397-51177416 None:intergenic 40.0%
CAAGCAAGTGGTCAAATTTC+TGG - Chr8:51177305-51177324 None:intergenic 40.0%
CAATCTTGTGCACTATAGGT+TGG + Chr8:51176584-51176603 MsG0880044902.01.T01:intron 40.0%
CAATTGTTAGGGGAAGATCT+TGG + Chr8:51174660-51174679 MsG0880044902.01.T01:intron 40.0%
CTCATAAAGGAACCATTCTG+CGG - Chr8:51175817-51175836 None:intergenic 40.0%
GAAGGGCTGAGATTAAAAGA+TGG - Chr8:51172794-51172813 None:intergenic 40.0%
GACATAATGATAGCACCACA+AGG - Chr8:51175675-51175694 None:intergenic 40.0%
GATAAGATCTAACACACTGC+AGG - Chr8:51177636-51177655 None:intergenic 40.0%
GCAATAGGGTTATCTCCATT+GGG - Chr8:51176806-51176825 None:intergenic 40.0%
GCGACCTGATTATGAAATGA+TGG + Chr8:51174615-51174634 MsG0880044902.01.T01:intron 40.0%
GCTATGAATCATAGTGACAC+AGG - Chr8:51174782-51174801 None:intergenic 40.0%
GGTGTGTGATCCACAAATAT+TGG - Chr8:51173513-51173532 None:intergenic 40.0%
GGTTCAGAAAATGTTGGATG+CGG + Chr8:51177166-51177185 MsG0880044902.01.T01:intron 40.0%
GTCTTCTGGTCCAGTTAAAT+TGG + Chr8:51177949-51177968 MsG0880044902.01.T01:CDS 40.0%
GTTCATGGATACCGAGAATT+TGG + Chr8:51173189-51173208 MsG0880044902.01.T01:intron 40.0%
TAAGATCTAACACACTGCAG+GGG - Chr8:51177634-51177653 None:intergenic 40.0%
TAGTGTGAATAAGGAGCAAG+AGG + Chr8:51174151-51174170 MsG0880044902.01.T01:intron 40.0%
TATCGAGGTCAACGTATCAA+CGG + Chr8:51176162-51176181 MsG0880044902.01.T01:CDS 40.0%
TCAAGGGTCCTTGTCATAAT+TGG - Chr8:51177026-51177045 None:intergenic 40.0%
TCGAATAATCATCCGCAGAA+TGG + Chr8:51175802-51175821 MsG0880044902.01.T01:CDS 40.0%
TCTCGGTATTCCCAAATTCT+CGG - Chr8:51173203-51173222 None:intergenic 40.0%
TGAATTCTCTCACCTTGGTT+GGG + Chr8:51176050-51176069 MsG0880044902.01.T01:CDS 40.0%
TGATTGTGAAGGATTGCCTT+TGG - Chr8:51176912-51176931 None:intergenic 40.0%
TGCTGAATTGACCGAACTAT+AGG + Chr8:51177454-51177473 MsG0880044902.01.T01:intron 40.0%
TGGAGATCTGCCAATTTAAC+TGG - Chr8:51177962-51177981 None:intergenic 40.0%
TGGGTAAATGGACAAAGCAT+TGG + Chr8:51176860-51176879 MsG0880044902.01.T01:intron 40.0%
TGTAACTTATTACCTGCAGC+AGG - Chr8:51178007-51178026 None:intergenic 40.0%
TTTGTGAGTTATGGGTGAGA+AGG - Chr8:51173821-51173840 None:intergenic 40.0%
! AATTTTCGGCTCTTAGTGTG+GGG + Chr8:51173558-51173577 MsG0880044902.01.T01:intron 40.0%
! AGCTAAGGTCTAAGGCAATA+GGG - Chr8:51176820-51176839 None:intergenic 40.0%
! CAAACTTTTAGTGTCCAGTC+GGG - Chr8:51177779-51177798 None:intergenic 40.0%
! GCCCTTCCTTTTTAATCTGA+TGG + Chr8:51172807-51172826 MsG0880044902.01.T01:intron 40.0%
! GCTGAAAGCGTAAAAGAGAA+TGG + Chr8:51172684-51172703 MsG0880044902.01.T01:intron 40.0%
! TAAGCTTACCTCAGTTGGTA+AGG - Chr8:51173347-51173366 None:intergenic 40.0%
! TGCGGTGATTTGAAATAAGC+AGG + Chr8:51177184-51177203 MsG0880044902.01.T01:intron 40.0%
! TGTCAACAATGGAGGTTTTC+TGG - Chr8:51173719-51173738 None:intergenic 40.0%
! TTTTTGCGATTTTGCACACG+CGG - Chr8:51175394-51175413 None:intergenic 40.0%
!! TTAGGAGCATATCGGCTTAT+AGG + Chr8:51175980-51175999 MsG0880044902.01.T01:CDS 40.0%
!! TTCCTGTTTCTAGAGCATCA+TGG + Chr8:51176304-51176323 MsG0880044902.01.T01:intron 40.0%
!!! AATTTTTTTGGTGGTGTCCG+GGG + Chr8:51173286-51173305 MsG0880044902.01.T01:intron 40.0%
!!! CAATTTTTTTGGTGGTGTCC+GGG + Chr8:51173285-51173304 MsG0880044902.01.T01:intron 40.0%
!!! GCAATTTTTTTGGTGGTGTC+CGG + Chr8:51173284-51173303 MsG0880044902.01.T01:intron 40.0%
AAAGGTGAGGCTTGGGTAAA+TGG + Chr8:51176848-51176867 MsG0880044902.01.T01:intron 45.0%
AACTTGGTTGTCCCGAACTT+TGG + Chr8:51177902-51177921 MsG0880044902.01.T01:CDS 45.0%
AATGGCAAAAGGTGAGGCTT+GGG + Chr8:51176841-51176860 MsG0880044902.01.T01:intron 45.0%
AATTCAGGCAGACCAGAACA+CGG - Chr8:51176036-51176055 None:intergenic 45.0%
ACATGAGCTGTCAACAATGG+AGG - Chr8:51173727-51173746 None:intergenic 45.0%
ACTAGCGATGTAACGTCTTC+TGG + Chr8:51177935-51177954 MsG0880044902.01.T01:CDS 45.0%
ATCGAGGTCAACGTATCAAC+GGG + Chr8:51176163-51176182 MsG0880044902.01.T01:CDS 45.0%
ATCTTATCACGTACCTTCCC+AGG + Chr8:51177648-51177667 MsG0880044902.01.T01:intron 45.0%
CAACCAAGGTGAGAGAATTC+AGG - Chr8:51176051-51176070 None:intergenic 45.0%
CACACTGCAACTCATACATG+AGG - Chr8:51174823-51174842 None:intergenic 45.0%
CAGAAAGATGGTTGAAGGTG+AGG + Chr8:51172530-51172549 MsG0880044902.01.T01:intron 45.0%
CCAACATGAGCTGTCAACAA+TGG - Chr8:51173730-51173749 None:intergenic 45.0%
CCATTGTTGACAGCTCATGT+TGG + Chr8:51173727-51173746 MsG0880044902.01.T01:intron 45.0%
CTACCATTAAGGCAAGCAAG+TGG - Chr8:51177317-51177336 None:intergenic 45.0%
CTCACCTTCAACCATCTTTC+TGG - Chr8:51172532-51172551 None:intergenic 45.0%
CTGAATTCTCTCACCTTGGT+TGG + Chr8:51176049-51176068 MsG0880044902.01.T01:CDS 45.0%
GAAAGATGGTTGAAGGTGAG+GGG + Chr8:51172532-51172551 MsG0880044902.01.T01:intron 45.0%
GAATTCTCTCACCTTGGTTG+GGG + Chr8:51176051-51176070 MsG0880044902.01.T01:CDS 45.0%
GACCTTAGCTCAATGGCAAA+AGG + Chr8:51176830-51176849 MsG0880044902.01.T01:intron 45.0%
GAGTGTGAATAAGGAGCAAG+AGG + Chr8:51174191-51174210 MsG0880044902.01.T01:intron 45.0%
GGAGCTTCTGAGTGTGAATA+AGG + Chr8:51174182-51174201 MsG0880044902.01.T01:intron 45.0%
GGAGTTTCTTAATGGCCACA+AGG - Chr8:51176191-51176210 None:intergenic 45.0%
GGCAATAGGGTTATCTCCAT+TGG - Chr8:51176807-51176826 None:intergenic 45.0%
GGCCATTAGTAAACTAGTGC+AGG + Chr8:51172419-51172438 MsG0880044902.01.T01:CDS 45.0%
GGTTATGGAGTTGTCTATCG+AGG + Chr8:51176147-51176166 MsG0880044902.01.T01:CDS 45.0%
GTACTTTGTAACACCTGGGA+AGG - Chr8:51177664-51177683 None:intergenic 45.0%
GTTGCATCCACACCAAAGTT+CGG - Chr8:51177917-51177936 None:intergenic 45.0%
GTTGGAAAGAGCTGCAAACT+TGG + Chr8:51177886-51177905 MsG0880044902.01.T01:intron 45.0%
TAGCTCAATGGCAAAAGGTG+AGG + Chr8:51176835-51176854 MsG0880044902.01.T01:intron 45.0%
TCCTGACGAAGGTAATCACT+TGG + Chr8:51178117-51178136 MsG0880044902.01.T01:intron 45.0%
TCTCAGTCAGGTGAAGATAG+CGG + Chr8:51175952-51175971 MsG0880044902.01.T01:CDS 45.0%
TGACCACTTGCTTGCCTTAA+TGG + Chr8:51177311-51177330 MsG0880044902.01.T01:intron 45.0%
TGCATTGTCCTTACCAACTG+AGG + Chr8:51173336-51173355 MsG0880044902.01.T01:intron 45.0%
TGCCATTGAGCTAAGGTCTA+AGG - Chr8:51176828-51176847 None:intergenic 45.0%
TGCCTTAGACCTTAGCTCAA+TGG + Chr8:51176823-51176842 MsG0880044902.01.T01:intron 45.0%
TGTGAATAAGGAGCAAGAGG+AGG + Chr8:51174154-51174173 MsG0880044902.01.T01:intron 45.0%
TTAGCCCTTGCATATCGCTA+CGG + Chr8:51173581-51173600 MsG0880044902.01.T01:intron 45.0%
TTGCATCCACACCAAAGTTC+GGG - Chr8:51177916-51177935 None:intergenic 45.0%
TTTCCCGTAGCGATATGCAA+GGG - Chr8:51173588-51173607 None:intergenic 45.0%
! AGCAAGAGGAGGAGATTTTC+AGG + Chr8:51174205-51174224 MsG0880044902.01.T01:intron 45.0%
! CACCTTTTGCCATTGAGCTA+AGG - Chr8:51176835-51176854 None:intergenic 45.0%
! GAGCTAAGGTCTAAGGCAAT+AGG - Chr8:51176821-51176840 None:intergenic 45.0%
!! CACCATGATGCTCTAGAAAC+AGG - Chr8:51176309-51176328 None:intergenic 45.0%
!! CTGCGTTGACTCACAATAGT+TGG + Chr8:51175038-51175057 MsG0880044902.01.T01:intron 45.0%
!! GTGAAGATAGCGGTGGTTTT+AGG + Chr8:51175962-51175981 MsG0880044902.01.T01:CDS 45.0%
!!! CGGTGGTTTTAGGAGCATAT+CGG + Chr8:51175972-51175991 MsG0880044902.01.T01:CDS 45.0%
AACCCTTTGGTGGGAAGAAG+AGG + Chr8:51172622-51172641 MsG0880044902.01.T01:intron 50.0%
AAGGTCTCAGGTTCAAACCC+CGG - Chr8:51173306-51173325 None:intergenic 50.0%
AAGTCTAGAAGAGGCAAGGG+CGG + Chr8:51175709-51175728 MsG0880044902.01.T01:CDS 50.0%
ACCCTCTTCTTCCCACCAAA+GGG - Chr8:51172627-51172646 None:intergenic 50.0%
ACCCTTTGGTGGGAAGAAGA+GGG + Chr8:51172623-51172642 MsG0880044902.01.T01:intron 50.0%
ACGGGTCACATGTTTCGAAC+TGG + Chr8:51172454-51172473 MsG0880044902.01.T01:CDS 50.0%
ACGTATCAACGGGAACCTTG+TGG + Chr8:51176173-51176192 MsG0880044902.01.T01:CDS 50.0%
AGCATTCTTGGTCCTGACGA+AGG + Chr8:51178106-51178125 MsG0880044902.01.T01:CDS 50.0%
AGTTGAGGTCGCCAGAAAGA+TGG + Chr8:51172518-51172537 MsG0880044902.01.T01:CDS 50.0%
ATCACTTGGCATTACCCGAC+TGG + Chr8:51177762-51177781 MsG0880044902.01.T01:intron 50.0%
CAATGGCAAAAGGTGAGGCT+TGG + Chr8:51176840-51176859 MsG0880044902.01.T01:intron 50.0%
CACATGTTTCGAACTGGTGG+TGG + Chr8:51172460-51172479 MsG0880044902.01.T01:CDS 50.0%
CCAACTGAGGTAAGCTTACG+CGG + Chr8:51173349-51173368 MsG0880044902.01.T01:intron 50.0%
CTGCCTGAATTCTCTCACCT+TGG + Chr8:51176045-51176064 MsG0880044902.01.T01:CDS 50.0%
GATCTGAATGGCTCTCAGTC+AGG + Chr8:51175940-51175959 MsG0880044902.01.T01:CDS 50.0%
GCCAAGTGATTACCTTCGTC+AGG - Chr8:51178121-51178140 None:intergenic 50.0%
GGTCACATGTTTCGAACTGG+TGG + Chr8:51172457-51172476 MsG0880044902.01.T01:CDS 50.0%
GGTCCCTTAACGTAAACCAG+TGG - Chr8:51176077-51176096 None:intergenic 50.0%
GTCGCCAGAAAGATGGTTGA+AGG + Chr8:51172525-51172544 MsG0880044902.01.T01:CDS 50.0%
GTTATGGGTGAGAAGGAGCA+TGG - Chr8:51173814-51173833 None:intergenic 50.0%
GTTTCCCGTAGCGATATGCA+AGG - Chr8:51173589-51173608 None:intergenic 50.0%
TAGCCCTTGCATATCGCTAC+GGG + Chr8:51173582-51173601 MsG0880044902.01.T01:intron 50.0%
! ATGGTGGAGGGTGATGAATC+TGG + Chr8:51172662-51172681 MsG0880044902.01.T01:intron 50.0%
!! GACAAAGCATTGGCCGCTAT+TGG + Chr8:51176870-51176889 MsG0880044902.01.T01:intron 50.0%
!! GGGCCACTGGTTTACGTTAA+GGG + Chr8:51176071-51176090 MsG0880044902.01.T01:CDS 50.0%
!! TGGTGACGGCAATTCTCGAA+AGG + Chr8:51175852-51175871 MsG0880044902.01.T01:CDS 50.0%
AAGGAGCAAGAGGAGCGAGA+GGG + Chr8:51174161-51174180 MsG0880044902.01.T01:intron 55.0%
AGCAACATTGGACCTGCTGC+AGG + Chr8:51177992-51178011 MsG0880044902.01.T01:CDS 55.0%
CACCCTCTTCTTCCCACCAA+AGG - Chr8:51172628-51172647 None:intergenic 55.0%
CCGCGTAAGCTTACCTCAGT+TGG - Chr8:51173352-51173371 None:intergenic 55.0%
CTTTGGTGGGAAGAAGAGGG+TGG + Chr8:51172626-51172645 MsG0880044902.01.T01:intron 55.0%
GGTTGTCCCGAACTTTGGTG+TGG + Chr8:51177907-51177926 MsG0880044902.01.T01:CDS 55.0%
TAAACCAGTGGCCCCAACCA+AGG - Chr8:51176065-51176084 None:intergenic 55.0%
TAAGGAGCAAGAGGAGCGAG+AGG + Chr8:51174160-51174179 MsG0880044902.01.T01:intron 55.0%
TCACCCTCCACCATCTGTTC+TGG - Chr8:51172656-51172675 None:intergenic 55.0%
TGGTTCGCCAGAACAGATGG+TGG + Chr8:51172646-51172665 MsG0880044902.01.T01:intron 55.0%
TTTCACGCCGGGAAGAGTTG+AGG + Chr8:51172503-51172522 MsG0880044902.01.T01:CDS 55.0%
! CAGTCAGGTGAAGATAGCGG+TGG + Chr8:51175955-51175974 MsG0880044902.01.T01:CDS 55.0%
! GGTGAGAAGGAGCATGGCAT+CGG - Chr8:51173808-51173827 None:intergenic 55.0%
! TGGTGTGTACCGGCGAAGAT+GGG + Chr8:51172480-51172499 MsG0880044902.01.T01:CDS 55.0%
! TTCGCCAGAACAGATGGTGG+AGG + Chr8:51172649-51172668 MsG0880044902.01.T01:intron 55.0%
! TTGCGATTTTGCACACGCGG+AGG - Chr8:51175391-51175410 None:intergenic 55.0%
!! GAACTGGTGGTGGTGTGTAC+CGG + Chr8:51172470-51172489 MsG0880044902.01.T01:CDS 55.0%
!! GGGGCCACTGGTTTACGTTA+AGG + Chr8:51176070-51176089 MsG0880044902.01.T01:CDS 55.0%
!! TCGCCAGAACAGATGGTGGA+GGG + Chr8:51172650-51172669 MsG0880044902.01.T01:intron 55.0%
AAGGGCGGCATGCTTCCTCT+TGG + Chr8:51175724-51175743 MsG0880044902.01.T01:CDS 60.0%
ACCAGAACACGGCGATGACG+CGG - Chr8:51176025-51176044 None:intergenic 60.0%
CACGGCGATGACGCGGATAT+AGG - Chr8:51176018-51176037 None:intergenic 60.0%
CTGGCGACCTCAACTCTTCC+CGG - Chr8:51172513-51172532 None:intergenic 60.0%
GGCGTGAAACCCATCTTCGC+CGG - Chr8:51172492-51172511 None:intergenic 60.0%
GGGTGGTTCGCCAGAACAGA+TGG + Chr8:51172643-51172662 MsG0880044902.01.T01:intron 60.0%
GTGCAGGAAGGTAGCGACGA+CGG + Chr8:51172435-51172454 MsG0880044902.01.T01:CDS 60.0%
TGCAGGAAGGTAGCGACGAC+GGG + Chr8:51172436-51172455 MsG0880044902.01.T01:CDS 60.0%
! GCGAAGATGGGTTTCACGCC+GGG + Chr8:51172492-51172511 MsG0880044902.01.T01:CDS 60.0%
! GGCGAAGATGGGTTTCACGC+CGG + Chr8:51172491-51172510 MsG0880044902.01.T01:CDS 60.0%
! GTGGTGTGTACCGGCGAAGA+TGG + Chr8:51172479-51172498 MsG0880044902.01.T01:CDS 60.0%
CTCACCTTGGTTGGGGCCAC+TGG + Chr8:51176058-51176077 MsG0880044902.01.T01:CDS 65.0%
TCCGCGTCATCGCCGTGTTC+TGG + Chr8:51176021-51176040 MsG0880044902.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 51172387 51178320 51172387 ID=MsG0880044902.01;Name=MsG0880044902.01
Chr8 mRNA 51172387 51178320 51172387 ID=MsG0880044902.01.T01;Parent=MsG0880044902.01;Name=MsG0880044902.01.T01;_AED=0.72;_eAED=1.00;_QI=0|0|0|0.6|0.75|0.8|5|0|366
Chr8 exon 51172387 51172546 51172387 ID=MsG0880044902.01.T01:exon:21739;Parent=MsG0880044902.01.T01
Chr8 exon 51175548 51176220 51175548 ID=MsG0880044902.01.T01:exon:21740;Parent=MsG0880044902.01.T01
Chr8 exon 51177895 51178013 51177895 ID=MsG0880044902.01.T01:exon:21741;Parent=MsG0880044902.01.T01
Chr8 exon 51178104 51178127 51178104 ID=MsG0880044902.01.T01:exon:21742;Parent=MsG0880044902.01.T01
Chr8 exon 51178196 51178320 51178196 ID=MsG0880044902.01.T01:exon:21743;Parent=MsG0880044902.01.T01
Chr8 CDS 51172387 51172546 51172387 ID=MsG0880044902.01.T01:cds;Parent=MsG0880044902.01.T01
Chr8 CDS 51175548 51176220 51175548 ID=MsG0880044902.01.T01:cds;Parent=MsG0880044902.01.T01
Chr8 CDS 51177895 51178013 51177895 ID=MsG0880044902.01.T01:cds;Parent=MsG0880044902.01.T01
Chr8 CDS 51178104 51178127 51178104 ID=MsG0880044902.01.T01:cds;Parent=MsG0880044902.01.T01
Chr8 CDS 51178196 51178320 51178196 ID=MsG0880044902.01.T01:cds;Parent=MsG0880044902.01.T01
Gene Sequence

>MsG0880044902.01.T01

ATGCAATTATTAGATCTCTCTACTGAAATGGCGGCCATTAGTAAACTAGTGCAGGAAGGTAGCGACGACGGGTCACATGTTTCGAACTGGTGGTGGTGTGTACCGGCGAAGATGGGTTTCACGCCGGGAAGAGTTGAGGTCGCCAGAAAGATGGTTGAAGATTTATTTGACAACAACAAAATGGCATCTGATCTAAATTCAAGGTTGTCAAAGAAAACAAATGTTTTTGGATTGAAAGCATGGGTATTAATGGGAATAGTGGTTGGTTTGTTCATTATAATCATCCTTGTGGTGCTATCATTATGTCTTGCTTTAAGAAAGAAGTCTAGAAGAGGCAAGGGCGGCATGCTTCCTCTTGGCCATATTCTATCTATTTCAGAAGAGATCAAAGAAATTAGTGTCAATCAAGTTTCATCGAATAATCATCCGCAGAATGGTTCCTTTATGAGCTTGAATGATAAGTTTGGTGACGGCAATTCTCGAAAGGTTTTGATTCAAACAAAGAATGGAGATAATAGTAGTCAATCAGGCTCATTTAATCGTTTAGAGAAAGATCTGAATGGCTCTCAGTCAGGTGAAGATAGCGGTGGTTTTAGGAGCATATCGGCTTATAGGTCTTCGTCACATCCTATATCCGCGTCATCGCCGTGTTCTGGTCTGCCTGAATTCTCTCACCTTGGTTGGGGCCACTGGTTTACGTTAAGGGACCTTGAACTTGCAACCTATAGGTTTGCAAAAGACATTATTATTGGAGAAGGTGGTTATGGAGTTGTCTATCGAGGTCAACGTATCAACGGGAACCTTGTGGCCATTAAGAAACTCCTCAATAATTTAGCTGCAAACTTGGTTGTCCCGAACTTTGGTGTGGATGCAACTAGCGATGTAACGTCTTCTGGTCCAGTTAAATTGGCAGATCTCCAGAGTATATTGAGCAACATTGGACCTGCTGCAGATAGCATTCTTGGTCCTGACGAAGATAATATTGCAATTGCATCCGATTATATTCGAATTTCAATCTACTTTTACAACTTTCTCTGTACTCTAAAAATTAAAGCTGTCAACTTAATATTTAAAACAGTATCCCATGATGAGGGGCATTAG

Protein sequence

>MsG0880044902.01.T01

MQLLDLSTEMAAISKLVQEGSDDGSHVSNWWWCVPAKMGFTPGRVEVARKMVEDLFDNNKMASDLNSRLSKKTNVFGLKAWVLMGIVVGLFIIIILVVLSLCLALRKKSRRGKGGMLPLGHILSISEEIKEISVNQVSSNNHPQNGSFMSLNDKFGDGNSRKVLIQTKNGDNSSQSGSFNRLEKDLNGSQSGEDSGGFRSISAYRSSSHPISASSPCSGLPEFSHLGWGHWFTLRDLELATYRFAKDIIIGEGGYGVVYRGQRINGNLVAIKKLLNNLAANLVVPNFGVDATSDVTSSGPVKLADLQSILSNIGPAADSILGPDEDNIAIASDYIRISIYFYNFLCTLKIKAVNLIFKTVSHDEGH*