AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044131.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044131.01.T01 MTR_8g056940 92.040 201 16 0 135 335 19 219 4.22e-137 388
MsG0880044131.01.T01 MTR_4g124130 64.039 203 72 1 134 335 18 220 1.53e-90 270
MsG0880044131.01.T01 MTR_2g070060 63.682 201 73 0 135 335 19 219 2.60e-90 269
MsG0880044131.01.T01 MTR_2g070140 62.687 201 75 0 135 335 3 203 9.24e-90 267
MsG0880044131.01.T01 MTR_2g070070 63.682 201 73 0 135 335 19 219 1.01e-88 265
MsG0880044131.01.T01 MTR_2g070180 62.437 197 74 0 134 330 18 214 7.65e-86 258
MsG0880044131.01.T01 MTR_2g070150 64.674 184 65 0 135 318 19 202 2.47e-84 253
MsG0880044131.01.T01 MTR_2g070130 57.500 200 85 0 136 335 20 219 3.96e-83 251
MsG0880044131.01.T01 MTR_3g467420 54.726 201 91 0 135 335 24 224 1.17e-81 248
MsG0880044131.01.T01 MTR_3g467430 54.950 202 91 0 134 335 23 224 8.45e-81 245
MsG0880044131.01.T01 MTR_2g070200 60.199 201 78 2 134 332 18 218 1.28e-80 244
MsG0880044131.01.T01 MTR_0186s0030 94.355 124 7 0 134 257 18 141 3.76e-80 241
MsG0880044131.01.T01 MTR_2g070110 59.701 201 80 1 135 335 19 218 5.65e-80 243
MsG0880044131.01.T01 MTR_2g070210 56.158 203 87 1 135 335 19 221 2.80e-78 239
MsG0880044131.01.T01 MTR_2g070120 57.672 189 80 0 137 325 21 209 3.51e-73 226
MsG0880044131.01.T01 MTR_5g076900 51.256 199 95 2 133 330 19 216 1.07e-64 204
MsG0880044131.01.T01 MTR_7g065740 43.147 197 106 4 132 324 19 213 1.16e-42 147
MsG0880044131.01.T01 MTR_7g065720 39.691 194 111 4 135 324 22 213 1.37e-40 142
MsG0880044131.01.T01 MTR_7g065660 40.415 193 110 4 135 324 22 212 1.61e-40 142
MsG0880044131.01.T01 MTR_7g065750 43.784 185 98 4 135 315 22 204 2.11e-40 141
MsG0880044131.01.T01 MTR_4g019780 37.688 199 118 5 130 324 17 213 4.50e-38 135
MsG0880044131.01.T01 MTR_7g065630 46.154 169 86 5 136 303 41 205 7.10e-38 135
MsG0880044131.01.T01 MTR_4g019790 40.437 183 104 4 136 315 23 203 1.00e-37 134
MsG0880044131.01.T01 MTR_6g080440 40.000 210 114 6 132 332 13 219 1.35e-37 134
MsG0880044131.01.T01 MTR_3g099757 48.649 148 75 1 138 285 23 169 3.50e-37 133
MsG0880044131.01.T01 MTR_1g090060 40.104 192 110 3 138 325 21 211 4.33e-37 133
MsG0880044131.01.T01 MTR_8g087425 38.889 180 107 2 138 315 23 201 5.43e-37 132
MsG0880044131.01.T01 MTR_4g059730 40.933 193 109 3 137 325 21 212 2.54e-36 130
MsG0880044131.01.T01 MTR_7g065265 40.000 205 113 6 133 333 20 218 3.56e-36 130
MsG0880044131.01.T01 MTR_7g065230 39.189 222 119 8 118 333 2 213 8.50e-36 129
MsG0880044131.01.T01 MTR_7g065270 38.725 204 117 5 133 333 20 218 1.56e-35 129
MsG0880044131.01.T01 MTR_8g087410 40.361 166 96 2 138 301 24 188 1.92e-35 129
MsG0880044131.01.T01 MTR_5g037380 41.176 204 105 7 135 326 20 220 2.53e-35 128
MsG0880044131.01.T01 MTR_7g065710 48.592 142 70 3 134 274 18 157 5.99e-35 127
MsG0880044131.01.T01 MTR_5g040430 34.211 190 118 2 133 315 20 209 2.14e-34 126
MsG0880044131.01.T01 MTR_7g065590 40.571 175 97 5 133 303 20 191 6.30e-34 124
MsG0880044131.01.T01 MTR_1g090150 48.921 139 65 4 138 273 21 156 1.04e-33 124
MsG0880044131.01.T01 MTR_7g065290 37.255 204 120 5 133 333 20 218 1.80e-33 123
MsG0880044131.01.T01 MTR_0186s0090 62.931 116 30 5 22 135 22 126 6.49e-33 120
MsG0880044131.01.T01 MTR_8g061950 39.267 191 101 5 133 311 18 205 2.40e-32 120
MsG0880044131.01.T01 MTR_1g090100 40.314 191 109 3 138 324 20 209 3.03e-32 120
MsG0880044131.01.T01 MTR_1g115195 39.037 187 104 4 138 317 21 204 3.69e-32 120
MsG0880044131.01.T01 MTR_7g065600 41.714 175 95 5 133 303 20 191 4.24e-32 120
MsG0880044131.01.T01 MTR_7g065680 48.227 141 70 3 135 274 22 160 5.06e-32 119
MsG0880044131.01.T01 MTR_8g056930 81.429 70 11 2 68 135 57 126 5.05e-31 115
MsG0880044131.01.T01 MTR_1g090070 37.563 197 109 5 138 325 27 218 1.77e-30 115
MsG0880044131.01.T01 MTR_7g065640 46.721 122 63 2 135 255 22 142 1.87e-30 115
MsG0880044131.01.T01 MTR_7g065700 48.921 139 68 3 135 272 22 158 1.89e-30 115
MsG0880044131.01.T01 MTR_7g065260 38.824 170 99 4 137 303 31 198 8.83e-30 114
MsG0880044131.01.T01 MTR_1g090090 38.220 191 113 3 138 324 21 210 3.37e-29 112
MsG0880044131.01.T01 MTR_2g072120 61.111 72 28 0 163 234 1 72 2.76e-25 97.4
MsG0880044131.01.T01 MTR_4g043640 86.047 43 6 0 264 306 44 86 1.62e-21 87.4
MsG0880044131.01.T01 MTR_5g037390 42.466 73 40 2 144 214 11 83 9.44e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044131.01.T01 AT1G78380 61.616 198 76 0 135 332 19 216 7.69e-86 258
MsG0880044131.01.T01 AT1G78370 58.673 196 81 0 135 330 19 214 1.08e-84 255
MsG0880044131.01.T01 AT1G17180 58.416 202 84 0 134 335 18 219 3.20e-83 251
MsG0880044131.01.T01 AT1G17170 59.204 201 81 1 135 335 19 218 2.44e-82 249
MsG0880044131.01.T01 AT1G78340 59.898 197 79 0 134 330 18 214 3.03e-82 249
MsG0880044131.01.T01 AT1G78360 58.974 195 79 1 137 330 21 215 2.46e-79 241
MsG0880044131.01.T01 AT1G53680 54.040 198 89 2 135 330 22 219 7.63e-75 230
MsG0880044131.01.T01 AT1G78320 56.345 197 86 0 134 330 18 214 2.16e-74 229
MsG0880044131.01.T01 AT1G17190 53.266 199 93 0 134 332 19 217 7.62e-74 228
MsG0880044131.01.T01 AT3G43800 49.541 218 104 4 119 330 2 219 5.53e-62 197
MsG0880044131.01.T01 AT1G78320 47.208 197 77 1 134 330 18 187 6.83e-55 178
MsG0880044131.01.T01 AT2G29420 39.910 223 119 7 118 333 6 220 7.50e-44 150
MsG0880044131.01.T01 AT3G09270 47.647 170 86 2 137 303 23 192 6.22e-41 143
MsG0880044131.01.T01 AT2G29460 39.706 204 117 4 134 333 21 222 6.23e-38 135
MsG0880044131.01.T01 AT1G10370 38.889 198 113 4 136 325 21 218 3.13e-37 133
MsG0880044131.01.T01 AT2G29470 38.119 202 118 5 137 333 24 223 4.26e-36 130
MsG0880044131.01.T01 AT2G29490 40.659 182 104 2 137 315 24 204 6.06e-36 130
MsG0880044131.01.T01 AT1G74590 35.784 204 119 4 137 331 24 224 8.22e-36 130
MsG0880044131.01.T01 AT2G29480 43.478 161 86 3 120 276 6 165 8.54e-36 129
MsG0880044131.01.T01 AT2G29450 44.624 186 86 7 120 290 5 188 3.80e-35 128
MsG0880044131.01.T01 AT1G59700 41.379 203 102 7 136 325 22 220 5.47e-35 127
MsG0880044131.01.T01 AT5G62480 33.824 204 125 2 137 330 25 228 6.87e-35 127
MsG0880044131.01.T01 AT2G29440 48.980 147 63 4 137 276 23 164 1.22e-34 126
MsG0880044131.01.T01 AT1G27140 37.981 208 116 5 136 333 22 226 1.49e-33 124
MsG0880044131.01.T01 AT1G10360 38.191 199 115 4 135 325 20 218 1.82e-33 123
MsG0880044131.01.T01 AT1G59670 38.835 206 117 5 135 331 21 226 1.43e-32 121
MsG0880044131.01.T01 AT1G27130 36.500 200 118 4 134 324 20 219 1.87e-32 121
MsG0880044131.01.T01 AT1G69930 34.010 197 123 3 135 324 27 223 3.72e-30 115
MsG0880044131.01.T01 AT1G69920 34.826 201 118 5 135 324 49 247 2.56e-27 108
MsG0880044131.01.T01 AT5G62480 28.834 163 81 2 137 291 25 160 8.82e-17 78.6
MsG0880044131.01.T01 AT5G62480 28.834 163 82 2 137 291 25 161 1.05e-16 78.2

Find 74 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAACTCAAGCAAGATTT+TGG 0.133634 8:-36148657 MsG0880044131.01.T01:CDS
AGGATAGCATTGGCTGAAAA+AGG 0.234872 8:-36148871 MsG0880044131.01.T01:CDS
AAAATGTAAACTAAACAATT+TGG 0.242177 8:-36147928 MsG0880044131.01.T01:three_prime_UTR
ACTTATTTGTATAACTATAT+TGG 0.246318 8:+36147883 None:intergenic
GGAGTTGATTGAAGGCTTAA+AGG 0.261757 8:-36148261 MsG0880044131.01.T01:CDS
ATAAAGATGGACTCAGAAAT+TGG 0.267987 8:+36148742 None:intergenic
CTTGGAGACAAGCCTTATTT+TGG 0.284960 8:-36148224 MsG0880044131.01.T01:CDS
TAAGACTATCATATTAATTA+AGG 0.293716 8:+36147836 None:intergenic
TGAAGAAGACAACAAGTTAT+TGG 0.323872 8:-36151423 MsG0880044131.01.T01:CDS
GATTCATTTGCAAAAGCATT+TGG 0.343663 8:+36148806 None:intergenic
GGTTGTTCCTATTAGTGCTT+TGG 0.345626 8:-36147907 MsG0880044131.01.T01:three_prime_UTR
GTGATGTTGGAGGAAGGATA+TGG 0.346197 8:-36148319 MsG0880044131.01.T01:CDS
CCTCCTAGGGCTTCCTGCAC+AGG 0.359454 8:+36152157 None:intergenic
TATTGGACCAAAGCACTAAT+AGG 0.362495 8:+36147900 None:intergenic
CTCTGAGAAATTGAACTTGT+TGG 0.369958 8:-36147964 MsG0880044131.01.T01:three_prime_UTR
ATCATGCCTACTCCATGAAC+AGG 0.394107 8:+36149678 None:intergenic
TAGGGTTTCACCCTCCTCCT+AGG 0.402423 8:+36152143 None:intergenic
CTCTTTGATCATTCTTCTGC+CGG 0.408338 8:-36149636 MsG0880044131.01.T01:CDS
TATAGGAACGGCCCTGTTCA+TGG 0.410732 8:-36149690 MsG0880044131.01.T01:intron
AATTCCAGTTCTTATCCATA+AGG 0.411200 8:-36148770 MsG0880044131.01.T01:CDS
TGATGAGGTTTGGAAGGATA+AGG 0.411738 8:-36148707 MsG0880044131.01.T01:CDS
TTTCCCTTATGGATAAGAAC+TGG 0.413273 8:+36148766 None:intergenic
AAAGAGAGATGAGATTGAAT+TGG 0.418834 8:-36148291 MsG0880044131.01.T01:CDS
TTGAGTATATTGATGAGGTT+TGG 0.428745 8:-36148717 MsG0880044131.01.T01:CDS
TAAGGATCTGAGGGTAGAAA+TGG 0.431150 8:+36148682 None:intergenic
AATGTGTCACCACCAAAATA+AGG 0.433956 8:+36148212 None:intergenic
TGAGATTGAATTGGCAAAGA+AGG 0.443100 8:-36148282 MsG0880044131.01.T01:CDS
CAACAAGTTATTGGCGAGAA+AGG 0.452096 8:-36151414 MsG0880044131.01.T01:CDS
ATTCCAGTTCTTATCCATAA+GGG 0.455725 8:-36148769 MsG0880044131.01.T01:CDS
ATGAGTTTGTTGTTAACTAT+AGG 0.457851 8:-36148022 MsG0880044131.01.T01:CDS
GATGCTCATCAAAATTCTAC+TGG 0.461436 8:-36149573 MsG0880044131.01.T01:CDS
TATAAAACCAACTATGAAAA+GGG 0.461833 8:+36148165 None:intergenic
GTATAAAACCAACTATGAAA+AGG 0.463905 8:+36148164 None:intergenic
GTGCAGGAAGCCCTAGGAGG+AGG 0.470873 8:-36152154 MsG0880044131.01.T01:CDS
TCTATATCTTCAAAATTCTC+AGG 0.474784 8:-36147765 MsG0880044131.01.T01:three_prime_UTR
AAAATGCAGGTTGGTGATGT+TGG 0.476506 8:-36148332 MsG0880044131.01.T01:intron
GCAAAGAAGGAGTTGATTGA+AGG 0.480756 8:-36148269 MsG0880044131.01.T01:CDS
AGGGTTTCACCCTCCTCCTA+GGG 0.481953 8:+36152144 None:intergenic
TGATGTTGGAGGAAGGATAT+GGG 0.485671 8:-36148318 MsG0880044131.01.T01:CDS
AATATACTCAACAATAAAGA+TGG 0.489706 8:+36148729 None:intergenic
AAGGAATTAGAGAATGTGCT+TGG 0.497037 8:-36148242 MsG0880044131.01.T01:CDS
GCATCGTGGCTCAGTTCAAA+AGG 0.498226 8:+36149591 None:intergenic
CTATAGGAAGAGGTTAGAGT+TGG 0.508025 8:-36148006 MsG0880044131.01.T01:CDS
TGGCGAGAAAGGAATCGTTA+AGG 0.510156 8:-36151403 MsG0880044131.01.T01:CDS
GACAAGAACATTGTCTATGT+TGG 0.510675 8:-36151381 MsG0880044131.01.T01:CDS
GCAGGTGACAAGACCTGTGC+AGG 0.515650 8:-36152170 MsG0880044131.01.T01:CDS
AGGGATAAAGTATGAGTACA+AGG 0.524364 8:-36148851 MsG0880044131.01.T01:CDS
AATCGAAGTAGGAGGCATGC+TGG 0.528896 8:+36151338 None:intergenic
TTCTTCTGCCGGTAGCAACA+TGG 0.531021 8:-36149625 MsG0880044131.01.T01:CDS
CTTCATCATCATCAAGAACA+AGG 0.540508 8:+36151441 None:intergenic
TTGTTGTTAACTATAGGAAG+AGG 0.543349 8:-36148016 MsG0880044131.01.T01:CDS
TTTGAGAGCAAGGATAGCAT+TGG 0.546018 8:-36148881 MsG0880044131.01.T01:intron
GTATATTGATGAGGTTTGGA+AGG 0.548215 8:-36148713 MsG0880044131.01.T01:CDS
GTTGGAGGAAGGATATGGGC+TGG 0.551186 8:-36148314 MsG0880044131.01.T01:CDS
CTCTAAACATGAATCGAAGT+AGG 0.554627 8:+36151327 None:intergenic
GTGGTGACCCATGTTGCTAC+CGG 0.560393 8:+36149617 None:intergenic
TCTTCTGCCGGTAGCAACAT+GGG 0.570099 8:-36149624 MsG0880044131.01.T01:CDS
GGCTCAGTTCAAAAGGAAAG+TGG 0.578985 8:+36149598 None:intergenic
AGACCTGTGCAGGAAGCCCT+AGG 0.579221 8:-36152160 MsG0880044131.01.T01:CDS
ATTATGCGACTTCAAAGTTG+AGG 0.582566 8:-36148132 MsG0880044131.01.T01:CDS
TGCAGGAAGCCCTAGGAGGA+GGG 0.589722 8:-36152153 MsG0880044131.01.T01:intron
GGTACAGAAGCAGATGTCGC+AGG 0.590443 8:-36152188 MsG0880044131.01.T01:CDS
TATTGTTGAGTATATTGATG+AGG 0.592193 8:-36148722 MsG0880044131.01.T01:CDS
AACGGCCCTGTTCATGGAGT+AGG 0.592371 8:-36149684 MsG0880044131.01.T01:CDS
ATGCAGGTTGGTGATGTTGG+AGG 0.604533 8:-36148329 MsG0880044131.01.T01:intron
TAAACATGAATCGAAGTAGG+AGG 0.611286 8:+36151330 None:intergenic
TATCTTCAAAATTCTCAGGT+CGG 0.616743 8:-36147761 MsG0880044131.01.T01:three_prime_UTR
AGTGTGATAAACTGATTGCA+TGG 0.628334 8:-36148106 MsG0880044131.01.T01:CDS
CCTGTGCAGGAAGCCCTAGG+AGG 0.650692 8:-36152157 MsG0880044131.01.T01:CDS
AGGTTGGTGATGTTGGAGGA+AGG 0.655636 8:-36148325 MsG0880044131.01.T01:CDS
GTGTGATAAACTGATTGCAT+GGG 0.669961 8:-36148105 MsG0880044131.01.T01:CDS
CGAAGTAGGAGGCATGCTGG+AGG 0.674029 8:+36151341 None:intergenic
TCATGCCTACTCCATGAACA+GGG 0.680475 8:+36149679 None:intergenic
AACATGAAACAACAACAACA+TGG 0.690838 8:-36149548 MsG0880044131.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGATATATTTTTTTCTT+TGG + Chr8:36148983-36149002 None:intergenic 10.0%
!!! AAAGATATATTTTTTTCTTT+GGG + Chr8:36148982-36149001 None:intergenic 10.0%
!!! AAGTTGTATATTTTTATTTA+CGG - Chr8:36150118-36150137 MsG0880044131.01.T01:intron 10.0%
!!! AATTTTTTATTATATGAATC+TGG - Chr8:36147849-36147868 MsG0880044131.01.T01:three_prime_UTR 10.0%
!!! AGATATTTTTATTTATTTAC+TGG + Chr8:36151386-36151405 None:intergenic 10.0%
!!! GATTACATTTTTATTTTATT+AGG - Chr8:36150184-36150203 MsG0880044131.01.T01:intron 10.0%
!!! TTACATTTTTATTTTATTAG+GGG - Chr8:36150186-36150205 MsG0880044131.01.T01:intron 10.0%
!! AAAATGTAAACTAAACAATT+TGG - Chr8:36152004-36152023 MsG0880044131.01.T01:intron 15.0%
!! ACTTATTTGTATAACTATAT+TGG + Chr8:36152052-36152071 None:intergenic 15.0%
!! GAGATATAATATTTCAATAA+TGG - Chr8:36150697-36150716 MsG0880044131.01.T01:intron 15.0%
!! GATAAAAAAAACATTATCAA+GGG - Chr8:36149828-36149847 MsG0880044131.01.T01:intron 15.0%
!! TAAGACTATCATATTAATTA+AGG + Chr8:36152099-36152118 None:intergenic 15.0%
!!! AAAAATTGATAATGCAAAAT+TGG + Chr8:36147836-36147855 None:intergenic 15.0%
!!! AAGATATATTTTTTTCTTTG+GGG + Chr8:36148981-36149000 None:intergenic 15.0%
!!! ATTTATAGAGAAAAGTATAT+GGG - Chr8:36148766-36148785 MsG0880044131.01.T01:CDS 15.0%
!!! ATTTTTATTTATTTACTGGT+AGG + Chr8:36151382-36151401 None:intergenic 15.0%
!!! TATTTATAGAGAAAAGTATA+TGG - Chr8:36148765-36148784 MsG0880044131.01.T01:CDS 15.0%
!!! TTTTTACTTAAGTACAAAAA+AGG - Chr8:36149058-36149077 MsG0880044131.01.T01:intron 15.0%
!! AATATACTCAACAATAAAGA+TGG + Chr8:36151206-36151225 None:intergenic 20.0%
!! AATATCTTTATCAATCTTCT+AGG + Chr8:36150092-36150111 None:intergenic 20.0%
!! ATCAAATAAAAAAGTTATCC+TGG - Chr8:36148071-36148090 MsG0880044131.01.T01:CDS 20.0%
!! ATTTAAAAATTGCAAAACCA+TGG + Chr8:36147927-36147946 None:intergenic 20.0%
!! CATTCTTGATATTTAATCAA+TGG - Chr8:36151492-36151511 MsG0880044131.01.T01:intron 20.0%
!! GGATAAAAAAAACATTATCA+AGG - Chr8:36149827-36149846 MsG0880044131.01.T01:intron 20.0%
!! TAATGTGTTAAAAAAAATGC+AGG - Chr8:36151587-36151606 MsG0880044131.01.T01:intron 20.0%
!! TACAATTTAAATCTTTGCAA+AGG + Chr8:36150787-36150806 None:intergenic 20.0%
!! TAGAAAAAATCAAGAAGTAA+CGG + Chr8:36148807-36148826 None:intergenic 20.0%
!! TATAAAACCAACTATGAAAA+GGG + Chr8:36151770-36151789 None:intergenic 20.0%
!! TTCTCTTGTCTTTAATAATA+TGG + Chr8:36151546-36151565 None:intergenic 20.0%
!!! AGATATATTTTTTTCTTTGG+GGG + Chr8:36148980-36148999 None:intergenic 20.0%
!!! ATGTATGATCTGTTTTATTA+TGG - Chr8:36150728-36150747 MsG0880044131.01.T01:intron 20.0%
!!! TGTATGATCTGTTTTATTAT+GGG - Chr8:36150729-36150748 MsG0880044131.01.T01:intron 20.0%
! AAACTCATATCTTATTAGGA+AGG + Chr8:36151466-36151485 None:intergenic 25.0%
! AACCAACATAATATAGCAAA+GGG + Chr8:36150764-36150783 None:intergenic 25.0%
! ACTAATATTAATCGTGACTA+TGG + Chr8:36150946-36150965 None:intergenic 25.0%
! ATGTTTCTTCAAAGTGAATT+AGG + Chr8:36149204-36149223 None:intergenic 25.0%
! ATTTCAGAGTCAATGATTAT+AGG + Chr8:36150817-36150836 None:intergenic 25.0%
! GAAAAACTTCCGTTAAAAAA+CGG + Chr8:36147972-36147991 None:intergenic 25.0%
! GATATGACCAATTAAATATC+TGG + Chr8:36149424-36149443 None:intergenic 25.0%
! GCTATTAAACAACAAATCAA+CGG + Chr8:36148869-36148888 None:intergenic 25.0%
! GTATAAAACCAACTATGAAA+AGG + Chr8:36151771-36151790 None:intergenic 25.0%
! TATTGTTGAGTATATTGATG+AGG - Chr8:36151210-36151229 MsG0880044131.01.T01:intron 25.0%
! TCAATTATCTAGTCAAAACA+AGG - Chr8:36148891-36148910 MsG0880044131.01.T01:intron 25.0%
! TCCTAAACTCATATCTTATT+AGG + Chr8:36151470-36151489 None:intergenic 25.0%
! TCCTAATAAGATATGAGTTT+AGG - Chr8:36151466-36151485 MsG0880044131.01.T01:intron 25.0%
! TCTATATCTTCAAAATTCTC+AGG - Chr8:36152167-36152186 MsG0880044131.01.T01:CDS 25.0%
! TGTTTCACAAAGATTGTATT+CGG - Chr8:36150501-36150520 MsG0880044131.01.T01:intron 25.0%
! TGTTTCACAAAGATTGTATT+CGG + Chr8:36150520-36150501 None:intergenic 25.0%
!! AAACACTTAATTTTCCCTTT+TGG + Chr8:36149456-36149475 None:intergenic 25.0%
!! ATTTATGTTGATGAAGGTAT+CGG + Chr8:36149948-36149967 None:intergenic 25.0%
!! TTTTCGATTATCAAGATGAA+CGG - Chr8:36149721-36149740 MsG0880044131.01.T01:intron 25.0%
!! TTTTTACAATGTTGAGTGTT+GGG - Chr8:36149640-36149659 MsG0880044131.01.T01:CDS 25.0%
!!! ATGAGTTTGTTGTTAACTAT+AGG - Chr8:36151910-36151929 MsG0880044131.01.T01:intron 25.0%
!!! GTATGATCTGTTTTATTATG+GGG - Chr8:36150730-36150749 MsG0880044131.01.T01:intron 25.0%
!!! TATGATCTGTTTTATTATGG+GGG - Chr8:36150731-36150750 MsG0880044131.01.T01:intron 25.0%
!!! TTCTTTTTGACTAGTATGTT+CGG + Chr8:36150045-36150064 None:intergenic 25.0%
!!! TTTTTTACAATGTTGAGTGT+TGG - Chr8:36149639-36149658 MsG0880044131.01.T01:CDS 25.0%
!!! TTTTTTTTTTGAGGGAAACA+AGG - Chr8:36148933-36148952 MsG0880044131.01.T01:intron 25.0%
AAAGAGAGATGAGATTGAAT+TGG - Chr8:36151641-36151660 MsG0880044131.01.T01:intron 30.0%
AACATGAAACAACAACAACA+TGG - Chr8:36150384-36150403 MsG0880044131.01.T01:intron 30.0%
AATTCCAGTTCTTATCCATA+AGG - Chr8:36151162-36151181 MsG0880044131.01.T01:intron 30.0%
AGTGTGTTGTGAATATGTTA+GGG - Chr8:36148721-36148740 MsG0880044131.01.T01:CDS 30.0%
ATCAACATAAATCCGAGATT+GGG - Chr8:36149956-36149975 MsG0880044131.01.T01:intron 30.0%
ATCATGAAACAACAACAACA+TGG + Chr8:36148296-36148315 None:intergenic 30.0%
ATGGACATCAAATAAAGAGA+AGG + Chr8:36150650-36150669 None:intergenic 30.0%
ATTCCAGTTCTTATCCATAA+GGG - Chr8:36151163-36151182 MsG0880044131.01.T01:intron 30.0%
CAAAAAGAAGGATTGTTCAT+GGG - Chr8:36150056-36150075 MsG0880044131.01.T01:intron 30.0%
CAATCATGATCAAGGATTAA+AGG + Chr8:36149394-36149413 None:intergenic 30.0%
CATATCTTATTAGGAAGGAA+AGG + Chr8:36151461-36151480 None:intergenic 30.0%
CTATTTGATCATTCTTCTGT+CGG + Chr8:36148387-36148406 None:intergenic 30.0%
GAACATACTAGTCAAAAAGA+AGG - Chr8:36150044-36150063 MsG0880044131.01.T01:intron 30.0%
GAACCAACATAATATAGCAA+AGG + Chr8:36150765-36150784 None:intergenic 30.0%
GAATGAGACACAAAAAACTT+TGG + Chr8:36151339-36151358 None:intergenic 30.0%
GTGTTAAAAAAAATGCAGGT+TGG - Chr8:36151591-36151610 MsG0880044131.01.T01:intron 30.0%
TAAACAACAAATCAACGGTT+GGG + Chr8:36148864-36148883 None:intergenic 30.0%
TATCTTCAAAATTCTCAGGT+CGG - Chr8:36152171-36152190 MsG0880044131.01.T01:CDS 30.0%
TCAAAAAGAAGGATTGTTCA+TGG - Chr8:36150055-36150074 MsG0880044131.01.T01:intron 30.0%
TCACTTCAAGATTATGTGAA+TGG - Chr8:36149786-36149805 MsG0880044131.01.T01:intron 30.0%
TCTTTGAATCGTATTAATGC+AGG + Chr8:36148438-36148457 None:intergenic 30.0%
TGAAGAAGACAACAAGTTAT+TGG - Chr8:36148509-36148528 MsG0880044131.01.T01:intron 30.0%
TTAAACAACAAATCAACGGT+TGG + Chr8:36148865-36148884 None:intergenic 30.0%
TTGAGTATATTGATGAGGTT+TGG - Chr8:36151215-36151234 MsG0880044131.01.T01:intron 30.0%
TTGTGAATATGTTAGGGTTA+GGG - Chr8:36148727-36148746 MsG0880044131.01.T01:CDS 30.0%
TTTCGATTATCAAGATGAAC+GGG - Chr8:36149722-36149741 MsG0880044131.01.T01:intron 30.0%
! AAAACTCAAGCAAGATTTTG+GGG - Chr8:36151277-36151296 MsG0880044131.01.T01:intron 30.0%
! ACTGGAATTTTCTTGTGAAT+TGG + Chr8:36151151-36151170 None:intergenic 30.0%
! ACTTAATTTTCCCTTTTGGT+GGG + Chr8:36149452-36149471 None:intergenic 30.0%
! AGAAAACTCAAGCAAGATTT+TGG - Chr8:36151275-36151294 MsG0880044131.01.T01:intron 30.0%
! ATAAAGATGGACTCAGAAAT+TGG + Chr8:36151193-36151212 None:intergenic 30.0%
! CTCTTTAAGTTCAACTTCAA+AGG - Chr8:36149356-36149375 MsG0880044131.01.T01:intron 30.0%
! GAAAACTCAAGCAAGATTTT+GGG - Chr8:36151276-36151295 MsG0880044131.01.T01:intron 30.0%
! TTCCCTTTGCTATATTATGT+TGG - Chr8:36150759-36150778 MsG0880044131.01.T01:intron 30.0%
! TTGTTGTTAACTATAGGAAG+AGG - Chr8:36151916-36151935 MsG0880044131.01.T01:intron 30.0%
!! GATTCATTTGCAAAAGCATT+TGG + Chr8:36151129-36151148 None:intergenic 30.0%
!!! ACAAGAAGGTAAGTTTTGTT+AGG - Chr8:36151311-36151330 MsG0880044131.01.T01:intron 30.0%
!!! GTTTTTTGTGTCTCATTCAA+TGG - Chr8:36151341-36151360 MsG0880044131.01.T01:CDS 30.0%
!!! TTTTGAAACAAGTACATGCT+TGG - Chr8:36150997-36151016 MsG0880044131.01.T01:intron 30.0%
AAAGAAGCAGCAGAAACATT+TGG - Chr8:36148453-36148472 MsG0880044131.01.T01:intron 35.0%
AAGGAATTAGAGAATGTGCT+TGG - Chr8:36151690-36151709 MsG0880044131.01.T01:intron 35.0%
ACAAAGATTGTATTCGGAAG+TGG - Chr8:36150507-36150526 MsG0880044131.01.T01:intron 35.0%
ACAAAGATTGTATTCGGAAG+TGG + Chr8:36150526-36150507 None:intergenic 35.0%
ACAAATGAAAGTAAGGCTAG+CGG - Chr8:36149534-36149553 MsG0880044131.01.T01:CDS 35.0%
ACACATTTCTTCGACACAAA+GGG + Chr8:36150553-36150572 None:intergenic 35.0%
ACATTAAAAGACTGCACGAT+AGG - Chr8:36150874-36150893 MsG0880044131.01.T01:intron 35.0%
AGCCTCCAAATATATAGGAA+CGG - Chr8:36150230-36150249 MsG0880044131.01.T01:intron 35.0%
AGGGATAAAGTATGAGTACA+AGG - Chr8:36151081-36151100 MsG0880044131.01.T01:intron 35.0%
AGTGTGATAAACTGATTGCA+TGG - Chr8:36151826-36151845 MsG0880044131.01.T01:intron 35.0%
ATCCTTGATCATGATTGTTC+CGG - Chr8:36149397-36149416 MsG0880044131.01.T01:intron 35.0%
ATTATGCGACTTCAAAGTTG+AGG - Chr8:36151800-36151819 MsG0880044131.01.T01:intron 35.0%
ATTGACCTACACTTGTATTG+AGG + Chr8:36149567-36149586 None:intergenic 35.0%
CAGTACCACAAATGAAAGTA+AGG - Chr8:36149527-36149546 MsG0880044131.01.T01:CDS 35.0%
CATCAACATAAATCCGAGAT+TGG - Chr8:36149955-36149974 MsG0880044131.01.T01:intron 35.0%
CTAAGAACCTACGATTCATA+AGG - Chr8:36147991-36148010 MsG0880044131.01.T01:exon 35.0%
CTAAGATCCTATGATGCATA+AGG + Chr8:36150846-36150865 None:intergenic 35.0%
CTCTAAACATGAATCGAAGT+AGG + Chr8:36148608-36148627 None:intergenic 35.0%
CTTCATCATCATCAAGAACA+AGG + Chr8:36148494-36148513 None:intergenic 35.0%
GACAAGAACATTGTCTATGT+TGG - Chr8:36148551-36148570 MsG0880044131.01.T01:intron 35.0%
GACATGTGTATAGAGATACA+AGG - Chr8:36149590-36149609 MsG0880044131.01.T01:CDS 35.0%
GACCAATTAAATATCTGGAC+CGG + Chr8:36149419-36149438 None:intergenic 35.0%
GACTCAATTCAAAAGGAAAG+TGG - Chr8:36148346-36148365 MsG0880044131.01.T01:intron 35.0%
GAGTGTGTTGTGAATATGTT+AGG - Chr8:36148720-36148739 MsG0880044131.01.T01:CDS 35.0%
GATGCTCATCAAAATTCTAC+TGG - Chr8:36150359-36150378 MsG0880044131.01.T01:intron 35.0%
GTATATTGATGAGGTTTGGA+AGG - Chr8:36151219-36151238 MsG0880044131.01.T01:intron 35.0%
GTGTATAGAGATACAAGGAT+CGG - Chr8:36149595-36149614 MsG0880044131.01.T01:CDS 35.0%
GTGTGATAAACTGATTGCAT+GGG - Chr8:36151827-36151846 MsG0880044131.01.T01:intron 35.0%
GTTCAACTTCAAAGGTTATG+AGG - Chr8:36149364-36149383 MsG0880044131.01.T01:intron 35.0%
GTTGTGAATATGTTAGGGTT+AGG - Chr8:36148726-36148745 MsG0880044131.01.T01:CDS 35.0%
TAAACATGAATCGAAGTAGG+AGG + Chr8:36148605-36148624 None:intergenic 35.0%
TAATGCACCTTATGAATCGT+AGG + Chr8:36148001-36148020 None:intergenic 35.0%
TAATGCACCTTATGCATCAT+AGG - Chr8:36150836-36150855 MsG0880044131.01.T01:intron 35.0%
TACACATTTCTTCGACACAA+AGG + Chr8:36150554-36150573 None:intergenic 35.0%
TACTTTCATTTGTGGTACTG+AGG + Chr8:36149527-36149546 None:intergenic 35.0%
TCAACATAAATCCGAGATTG+GGG - Chr8:36149957-36149976 MsG0880044131.01.T01:intron 35.0%
TGAAACAAGTTGCACTACAA+TGG + Chr8:36150669-36150688 None:intergenic 35.0%
TGAGATTGAATTGGCAAAGA+AGG - Chr8:36151650-36151669 MsG0880044131.01.T01:intron 35.0%
TGGTAAATGCTACACTTTGT+AGG - Chr8:36149806-36149825 MsG0880044131.01.T01:intron 35.0%
TGTGGTTTGACTAGAATGAA+AGG - Chr8:36149692-36149711 MsG0880044131.01.T01:intron 35.0%
TGTTGTAATCCGGTATCATT+CGG - Chr8:36149995-36150014 MsG0880044131.01.T01:intron 35.0%
TTCCGGTCCAGATATTTAAT+TGG - Chr8:36149414-36149433 MsG0880044131.01.T01:intron 35.0%
TTCCTATATATTTGGAGGCT+CGG + Chr8:36150230-36150249 None:intergenic 35.0%
TTGAATCGTATTAATGCAGG+AGG + Chr8:36148435-36148454 None:intergenic 35.0%
TTTCCCTTATGGATAAGAAC+TGG + Chr8:36151169-36151188 None:intergenic 35.0%
! AGTTTTCTCATAAGGATCTG+AGG + Chr8:36151263-36151282 None:intergenic 35.0%
! CACTTAATTTTCCCTTTTGG+TGG + Chr8:36149453-36149472 None:intergenic 35.0%
! CTCTGAGAAATTGAACTTGT+TGG - Chr8:36151968-36151987 MsG0880044131.01.T01:intron 35.0%
! CTTGCTTGAGTTTTCTCATA+AGG + Chr8:36151271-36151290 None:intergenic 35.0%
! CTTTGATCCCTTTTCATAGT+TGG - Chr8:36151760-36151779 MsG0880044131.01.T01:intron 35.0%
! GTTTTCTCATAAGGATCTGA+GGG + Chr8:36151262-36151281 None:intergenic 35.0%
! TATTGGACCAAAGCACTAAT+AGG + Chr8:36152035-36152054 None:intergenic 35.0%
! TCTCGGATTTATGTTGATGA+AGG + Chr8:36149954-36149973 None:intergenic 35.0%
! TTTGTGATAGCGATATATCC+AGG + Chr8:36148092-36148111 None:intergenic 35.0%
!! TAGAATTTTGATGAGCATCG+TGG + Chr8:36150358-36150377 None:intergenic 35.0%
!!! CAGAAATTGGTTTTCCCTTA+TGG + Chr8:36151180-36151199 None:intergenic 35.0%
AACAACAACATGGTCTTCTG+AGG + Chr8:36150413-36150394 None:intergenic 40.0%
AAGATGAACGGGTCGATATT+AGG - Chr8:36149733-36149752 MsG0880044131.01.T01:intron 40.0%
ACACATTCCTTCGACACAAA+GGG - Chr8:36148127-36148146 MsG0880044131.01.T01:CDS 40.0%
AGATGAACGGGTCGATATTA+GGG - Chr8:36149734-36149753 MsG0880044131.01.T01:intron 40.0%
ATATCCACTACCCACCAAAA+GGG - Chr8:36149439-36149458 MsG0880044131.01.T01:intron 40.0%
ATGACATGGTTGTCATGCAT+TGG - Chr8:36149664-36149683 MsG0880044131.01.T01:CDS 40.0%
ATGGTTCAACACTGCTCAAA+TGG + Chr8:36147908-36147927 None:intergenic 40.0%
CAACAAGTTATTGGCGAGAA+AGG - Chr8:36148518-36148537 MsG0880044131.01.T01:intron 40.0%
CTATAGGAAGAGGTTAGAGT+TGG - Chr8:36151926-36151945 MsG0880044131.01.T01:intron 40.0%
CTATCCTTGCTCTCAAAACA+AGG + Chr8:36151048-36151067 None:intergenic 40.0%
CTCGGCTCTCAATCAAAAAT+AGG + Chr8:36150212-36150231 None:intergenic 40.0%
CTCTTTGATCATTCTTCTGC+CGG - Chr8:36150296-36150315 MsG0880044131.01.T01:intron 40.0%
GCATACTATCAGAGAGTTTG+AGG - Chr8:36149895-36149914 MsG0880044131.01.T01:intron 40.0%
GGTTGTTCCTATTAGTGCTT+TGG - Chr8:36152025-36152044 MsG0880044131.01.T01:intron 40.0%
GTAGGTGAGATGTTGTAATC+CGG - Chr8:36149985-36150004 MsG0880044131.01.T01:intron 40.0%
GTAGTGCGACTCAATTCAAA+AGG - Chr8:36148339-36148358 MsG0880044131.01.T01:intron 40.0%
GTTCACCTCAATACAAGTGT+AGG - Chr8:36149559-36149578 MsG0880044131.01.T01:CDS 40.0%
TAAGGATCTGAGGGTAGAAA+TGG + Chr8:36151253-36151272 None:intergenic 40.0%
TACACATTCCTTCGACACAA+AGG - Chr8:36148126-36148145 MsG0880044131.01.T01:CDS 40.0%
TAGGGGAATCGAGGAATTTA+TGG - Chr8:36149752-36149771 MsG0880044131.01.T01:intron 40.0%
TCTAAGTCTTGACCTTGAGA+TGG + Chr8:36149875-36149894 None:intergenic 40.0%
TGACATGGTTGTCATGCATT+GGG - Chr8:36149665-36149684 MsG0880044131.01.T01:CDS 40.0%
TGATGAGGTTTGGAAGGATA+AGG - Chr8:36151225-36151244 MsG0880044131.01.T01:intron 40.0%
TGATGTTGGAGGAAGGATAT+GGG - Chr8:36151614-36151633 MsG0880044131.01.T01:intron 40.0%
TTTGAGAGCAAGGATAGCAT+TGG - Chr8:36151051-36151070 MsG0880044131.01.T01:intron 40.0%
! ATTTGAGCAGTGTTGAACCA+TGG - Chr8:36147907-36147926 MsG0880044131.01.T01:three_prime_UTR 40.0%
! GCAAAGAAGGAGTTGATTGA+AGG - Chr8:36151663-36151682 MsG0880044131.01.T01:intron 40.0%
! GGAGTTGATTGAAGGCTTAA+AGG - Chr8:36151671-36151690 MsG0880044131.01.T01:intron 40.0%
! GGGTGATTTTGTCAACAAGA+AGG - Chr8:36151297-36151316 MsG0880044131.01.T01:intron 40.0%
! TGTCTCACAGAGTTTTCCAA+TGG - Chr8:36150437-36150456 MsG0880044131.01.T01:intron 40.0%
!! AAAATGCAGGTTGGTGATGT+TGG - Chr8:36151600-36151619 MsG0880044131.01.T01:intron 40.0%
!! AGGATAGCATTGGCTGAAAA+AGG - Chr8:36151061-36151080 MsG0880044131.01.T01:intron 40.0%
!! GCTAGCCTTACTTTCATTTG+TGG + Chr8:36149535-36149554 None:intergenic 40.0%
!! GGATAGCATTGGCTGAAAAA+GGG - Chr8:36151062-36151081 MsG0880044131.01.T01:intron 40.0%
!! TGTTGATGAAGGTATCGGTA+TGG + Chr8:36149943-36149962 None:intergenic 40.0%
!!! CCTTTCGTGCCGTTTTTTAA+CGG - Chr8:36147960-36147979 MsG0880044131.01.T01:three_prime_UTR 40.0%
!!! CTATCCTTGTTTTGAGAGCA+AGG - Chr8:36151041-36151060 MsG0880044131.01.T01:intron 40.0%
!!! CTTGGAGACAAGCCTTATTT+TGG - Chr8:36151708-36151727 MsG0880044131.01.T01:intron 40.0%
AATGAAGGCTTGGGGAGAAA+GGG + Chr8:36149252-36149271 None:intergenic 45.0%
ACATGTGAGCAACAGTGTTG+AGG - Chr8:36148198-36148217 MsG0880044131.01.T01:CDS 45.0%
ACCTACTTGTTCCCCAATCT+CGG + Chr8:36149971-36149990 None:intergenic 45.0%
AGCCGAGCCTCCAAATATAT+AGG - Chr8:36150225-36150244 MsG0880044131.01.T01:intron 45.0%
ATCATGCCTACTCCATGAAC+AGG + Chr8:36150257-36150276 None:intergenic 45.0%
CAGGGCCGTTCCTATATATT+TGG + Chr8:36150238-36150257 None:intergenic 45.0%
CATATCCACTACCCACCAAA+AGG - Chr8:36149438-36149457 MsG0880044131.01.T01:intron 45.0%
CCAATGGTTCAAGCGTAGTT+CGG - Chr8:36150453-36150472 MsG0880044131.01.T01:intron 45.0%
CCAGAGAAAGAACTATGGCT+AGG + Chr8:36150021-36150040 None:intergenic 45.0%
CCAGCTAGCAATGTGACTAA+AGG - Chr8:36149276-36149295 MsG0880044131.01.T01:intron 45.0%
CCGTTAAAAAACGGCACGAA+AGG + Chr8:36147963-36147982 None:intergenic 45.0%
CCTAGCCATAGTTCTTTCTC+TGG - Chr8:36150018-36150037 MsG0880044131.01.T01:intron 45.0%
CCTTTAGTCACATTGCTAGC+TGG + Chr8:36149279-36149298 None:intergenic 45.0%
CTAAAGGAACTCTAGTCGTG+TGG - Chr8:36149292-36149311 MsG0880044131.01.T01:intron 45.0%
GACCGGAACAATCATGATCA+AGG + Chr8:36149402-36149421 None:intergenic 45.0%
GATGAACGGGTCGATATTAG+GGG - Chr8:36149735-36149754 MsG0880044131.01.T01:intron 45.0%
GGCCGTTCCTATATATTTGG+AGG + Chr8:36150235-36150254 None:intergenic 45.0%
GGCTCAGTTCAAAAGGAAAG+TGG + Chr8:36150337-36150356 None:intergenic 45.0%
GTGATGTTGGAGGAAGGATA+TGG - Chr8:36151613-36151632 MsG0880044131.01.T01:intron 45.0%
TCAGAGAGTTTGAGGAATCG+AGG - Chr8:36149903-36149922 MsG0880044131.01.T01:intron 45.0%
TCATGCCTACTCCATGAACA+GGG + Chr8:36150256-36150275 None:intergenic 45.0%
TCGGACCAGAGAAAGAACTA+TGG + Chr8:36150026-36150045 None:intergenic 45.0%
TGGCGAGAAAGGAATCGTTA+AGG - Chr8:36148529-36148548 MsG0880044131.01.T01:intron 45.0%
TGTCATGCATTGGGTGTATG+TGG - Chr8:36149674-36149693 MsG0880044131.01.T01:CDS 45.0%
TGTCTCACAGAGTTGTCCAA+TGG + Chr8:36148243-36148262 None:intergenic 45.0%
!! GTTGAGTGTTGGGAATGACA+TGG - Chr8:36149650-36149669 MsG0880044131.01.T01:CDS 45.0%
!! TTGCTAGCTGGTTCGAATGA+AGG + Chr8:36149267-36149286 None:intergenic 45.0%
!! TTTTCCCTTTTGGTGGGTAG+TGG + Chr8:36149446-36149465 None:intergenic 45.0%
!!! GGAGACAAGCCTTATTTTGG+TGG - Chr8:36151711-36151730 MsG0880044131.01.T01:intron 45.0%
!!! ATTACATTTTTATTTTATTA+GGG - Chr8:36150185-36150204 MsG0880044131.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG - Chr8:36148925-36148944 MsG0880044131.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+AGG - Chr8:36148924-36148943 MsG0880044131.01.T01:intron 5.0%
ACATGTGAGCAGCAGTGTTG+AGG + Chr8:36150482-36150501 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - Chr8:36148648-36148667 MsG0880044131.01.T01:CDS 50.0%
ATGGCTAGGCCGAATGATAC+CGG + Chr8:36150007-36150026 None:intergenic 50.0%
CCGAACTACGCTTGAACCAT+TGG + Chr8:36150456-36150475 None:intergenic 50.0%
CTGAACTACGCTCGAACCAT+TGG - Chr8:36148224-36148243 MsG0880044131.01.T01:CDS 50.0%
GAATGAAGGCTTGGGGAGAA+AGG + Chr8:36149253-36149272 None:intergenic 50.0%
GAGAGTTTGAGGAATCGAGG+TGG - Chr8:36149906-36149925 MsG0880044131.01.T01:intron 50.0%
GCATCGTGGCTCAGTTCAAA+AGG + Chr8:36150344-36150363 None:intergenic 50.0%
GGTCGATATTAGGGGAATCG+AGG - Chr8:36149743-36149762 MsG0880044131.01.T01:intron 50.0%
GTCTTGACCTTGAGATGGTC+AGG + Chr8:36149870-36149889 None:intergenic 50.0%
TATAGGAACGGCCCTGTTCA+TGG - Chr8:36150242-36150261 MsG0880044131.01.T01:intron 50.0%
TCCGAGATTGGGGAACAAGT+AGG - Chr8:36149967-36149986 MsG0880044131.01.T01:intron 50.0%
TCTGATGTCGCTCTCTGCTA+GGG + Chr8:36147810-36147829 None:intergenic 50.0%
TCTTCTGCCGGTAGCAACAT+GGG - Chr8:36150308-36150327 MsG0880044131.01.T01:intron 50.0%
TCTTCTGTCGGCAGCAACAT+GGG + Chr8:36148375-36148394 None:intergenic 50.0%
TTCTTCTGCCGGTAGCAACA+TGG - Chr8:36150307-36150326 MsG0880044131.01.T01:intron 50.0%
TTCTTCTGTCGGCAGCAACA+TGG + Chr8:36148376-36148395 None:intergenic 50.0%
! AATCGAAGTAGGAGGCATGC+TGG + Chr8:36148597-36148616 None:intergenic 50.0%
! CTGGTTCGAATGAAGGCTTG+GGG + Chr8:36149260-36149279 None:intergenic 50.0%
! GTGGTACTGAGGTAGCTGAA+GGG + Chr8:36149516-36149535 None:intergenic 50.0%
! TGTGGTACTGAGGTAGCTGA+AGG + Chr8:36149517-36149536 None:intergenic 50.0%
! TTATCAAGGGCTGCACCGAT+TGG - Chr8:36149841-36149860 MsG0880044131.01.T01:intron 50.0%
!! AGCTGGTTCGAATGAAGGCT+TGG + Chr8:36149262-36149281 None:intergenic 50.0%
!! AGGTTGGTGATGTTGGAGGA+AGG - Chr8:36151607-36151626 MsG0880044131.01.T01:intron 50.0%
!! ATGCAGGTTGGTGATGTTGG+AGG - Chr8:36151603-36151622 MsG0880044131.01.T01:intron 50.0%
!! GCTGGTTCGAATGAAGGCTT+GGG + Chr8:36149261-36149280 None:intergenic 50.0%
AACGGCCCTGTTCATGGAGT+AGG - Chr8:36150248-36150267 MsG0880044131.01.T01:intron 55.0%
AGGGTTTCACCCTCCTCCTA+GGG + Chr8:36147791-36147810 None:intergenic 55.0%
CTCTGATGTCGCTCTCTGCT+AGG + Chr8:36147811-36147830 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGAGG+TGG - Chr8:36148665-36148684 MsG0880044131.01.T01:CDS 55.0%
GAGATGGTCAGGCCTCCAAT+CGG + Chr8:36149859-36149878 None:intergenic 55.0%
GCACATGCCCTTTGTGTCGA+AGG + Chr8:36150562-36150543 None:intergenic 55.0%
GGTACAGAAGCAGATGTCGC+AGG - Chr8:36147744-36147763 MsG0880044131.01.T01:three_prime_UTR 55.0%
GTGGTGACCCATGTTGCTAC+CGG + Chr8:36150318-36150337 None:intergenic 55.0%
GTTGGAGGAAGGATATGGGC+TGG - Chr8:36151618-36151637 MsG0880044131.01.T01:intron 55.0%
TAGGGTTTCACCCTCCTCCT+AGG + Chr8:36147792-36147811 None:intergenic 55.0%
TTGGAGGCCTGACCATCTCA+AGG - Chr8:36149860-36149879 MsG0880044131.01.T01:intron 55.0%
AGACCTGTGCAGGAAGCCCT+AGG - Chr8:36147772-36147791 MsG0880044131.01.T01:three_prime_UTR 60.0%
GCAGGTGACAAGACCTGTGC+AGG - Chr8:36147762-36147781 MsG0880044131.01.T01:three_prime_UTR 60.0%
TGCAGGAAGCCCTAGGAGGA+GGG - Chr8:36147779-36147798 MsG0880044131.01.T01:three_prime_UTR 60.0%
! CGAAGTAGGAGGCATGCTGG+AGG + Chr8:36148594-36148613 None:intergenic 60.0%
! GGGGAGAAAGGGTGCGATGT+AGG + Chr8:36149241-36149260 None:intergenic 60.0%
!! TCAAGGGCTGCACCGATTGG+AGG - Chr8:36149844-36149863 MsG0880044131.01.T01:intron 60.0%
CCTCCTAGGGCTTCCTGCAC+AGG + Chr8:36147778-36147797 None:intergenic 65.0%
CCTGTGCAGGAAGCCCTAGG+AGG - Chr8:36147775-36147794 MsG0880044131.01.T01:three_prime_UTR 65.0%
GTGCAGGAAGCCCTAGGAGG+AGG - Chr8:36147778-36147797 MsG0880044131.01.T01:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 36147742 36152212 36147742 ID=MsG0880044131.01;Name=MsG0880044131.01
Chr8 mRNA 36147742 36152212 36147742 ID=MsG0880044131.01.T01;Parent=MsG0880044131.01;Name=MsG0880044131.01.T01;_AED=0.49;_eAED=0.55;_QI=0|0.25|0.2|1|0.5|0.4|5|259|335
Chr8 exon 36152154 36152212 36152154 ID=MsG0880044131.01.T01:exon:3243;Parent=MsG0880044131.01.T01
Chr8 exon 36151335 36151466 36151335 ID=MsG0880044131.01.T01:exon:3244;Parent=MsG0880044131.01.T01
Chr8 exon 36149496 36149707 36149496 ID=MsG0880044131.01.T01:exon:3245;Parent=MsG0880044131.01.T01
Chr8 exon 36148636 36148895 36148636 ID=MsG0880044131.01.T01:exon:3246;Parent=MsG0880044131.01.T01
Chr8 exon 36147742 36148345 36147742 ID=MsG0880044131.01.T01:exon:3247;Parent=MsG0880044131.01.T01
Chr8 CDS 36152154 36152212 36152154 ID=MsG0880044131.01.T01:cds;Parent=MsG0880044131.01.T01
Chr8 CDS 36151335 36151466 36151335 ID=MsG0880044131.01.T01:cds;Parent=MsG0880044131.01.T01
Chr8 CDS 36149496 36149707 36149496 ID=MsG0880044131.01.T01:cds;Parent=MsG0880044131.01.T01
Chr8 CDS 36148636 36148895 36148636 ID=MsG0880044131.01.T01:cds;Parent=MsG0880044131.01.T01
Chr8 CDS 36148001 36148345 36148001 ID=MsG0880044131.01.T01:cds;Parent=MsG0880044131.01.T01
Chr8 three_prime_UTR 36147742 36148000 36147742 ID=MsG0880044131.01.T01:three_prime_utr;Parent=MsG0880044131.01.T01
Gene Sequence

>MsG0880044131.01.T01

ATGGTACAGAAGCAGATGTCGCAGGTGACAAGACCTGTGCAGGAAGCCCTAGGAGGAGGAAGCCTTGTTCTTGATGATGATGAAGAAGACAACAAGTTATTGGCGAGAAAGGAATCGTTAAGGACAAGAACATTGTCTATGTTGGAACACGATATCATGAATCCTCCAGCATGCCTCCTACTTCGATTCATGAACGGCCCTGTTCATGGAGTAGGCATGATGCTAGATGATCATATTCTTCTCTTTGATCATTCTTCTGCCGGTAGCAACATGGGTCACCACTTTCCTTTTGAACTGAGCCACGATGCTCATCAAAATTCTACTGGACAACATGAAACAACAACAACATGGTCTTCTGAAGCAGAATCGATGTGTTGTATTTGTCTCACAGAGTTTTCCAATGCAAGGATAGCATTGGCTGAAAAAGGGATAAAGTATGAGTACAAGGAAGAAGATCTTGAAAACAAGAGCCAAATGCTTTTGCAAATGAATCCAATTCACAAGAAAATTCCAGTTCTTATCCATAAGGGAAAACCAATTTCTGAGTCCATCTTTATTGTTGAGTATATTGATGAGGTTTGGAAGGATAAGGTTCCATTTCTACCCTCAGATCCTTATGAGAAAACTCAAGCAAGATTTTGGGGTGATTTTGTCAACAAGAAGGTTGGTGATGTTGGAGGAAGGATATGGGCTGGAAAGAGAGATGAGATTGAATTGGCAAAGAAGGAGTTGATTGAAGGCTTAAAGGAATTAGAGAATGTGCTTGGAGACAAGCCTTATTTTGGTGGTGACACATTTGGGTTTGTTGACATTGCTTTGATCCCTTTTCATAGTTGGTTTTATACTTATGAGAAATTATGCGACTTCAAAGTTGAGGAAGAGTGTGATAAACTGATTGCATGGGCAAAGAGATGCAAGCAAAGAGATAGTGTTTCTAAATCTGTTGCTGATGAGAAAGAAGTGTATGAGTTTGTTGTTAACTATAGGAAGAGGTTAGAGTTGGACTGA

Protein sequence

>MsG0880044131.01.T01

MVQKQMSQVTRPVQEALGGGSLVLDDDEEDNKLLARKESLRTRTLSMLEHDIMNPPACLLLRFMNGPVHGVGMMLDDHILLFDHSSAGSNMGHHFPFELSHDAHQNSTGQHETTTTWSSEAESMCCICLTEFSNARIALAEKGIKYEYKEEDLENKSQMLLQMNPIHKKIPVLIHKGKPISESIFIVEYIDEVWKDKVPFLPSDPYEKTQARFWGDFVNKKVGDVGGRIWAGKRDEIELAKKELIEGLKELENVLGDKPYFGGDTFGFVDIALIPFHSWFYTYEKLCDFKVEEECDKLIAWAKRCKQRDSVSKSVADEKEVYEFVVNYRKRLELD*