Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408010 | XP_024630443.1 | 67.314 | 309 | 41 | 4 | 126 | 425 | 25 | 282 | 3.17e-130 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408010 | sp|Q0IGK1|MBD4L_ARATH | 34.507 | 426 | 192 | 12 | 12 | 421 | 88 | 442 | 5.63e-55 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408010 | A0A072TJT5 | 67.314 | 309 | 41 | 4 | 126 | 425 | 25 | 282 | 1.51e-130 | 387 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1408010 | 0.823596 | 1.272118e-53 | -8.615850e-47 |
| Msa0006110 | Msa1408010 | 0.839866 | 1.225935e-57 | -8.615850e-47 |
| Msa0007990 | Msa1408010 | 0.834735 | 2.524601e-56 | -8.615850e-47 |
| Msa0011660 | Msa1408010 | -0.814177 | 1.758989e-51 | -8.615850e-47 |
| Msa0015390 | Msa1408010 | 0.804236 | 2.379582e-49 | -8.615850e-47 |
| Msa0017510 | Msa1408010 | 0.818624 | 1.778815e-52 | -8.615850e-47 |
| Msa0022550 | Msa1408010 | 0.817429 | 3.312472e-52 | -8.615850e-47 |
| Msa0026910 | Msa1408010 | 0.827606 | 1.425462e-54 | -8.615850e-47 |
| Msa0027320 | Msa1408010 | 0.813866 | 2.060759e-51 | -8.615850e-47 |
| Msa0029310 | Msa1408010 | 0.808807 | 2.583650e-50 | -8.615850e-47 |
| Msa0031340 | Msa1408010 | 0.800455 | 1.429702e-48 | -8.615850e-47 |
| Msa0032090 | Msa1408010 | 0.810737 | 9.934286e-51 | -8.615850e-47 |
| Msa0032580 | Msa1408010 | 0.802589 | 5.220865e-49 | -8.615850e-47 |
| Msa0035120 | Msa1408010 | 0.808699 | 2.724624e-50 | -8.615850e-47 |
| Msa0035130 | Msa1408010 | 0.804442 | 2.155754e-49 | -8.615850e-47 |
| Msa0036130 | Msa1408010 | 0.803215 | 3.877472e-49 | -8.615850e-47 |
| Msa0040690 | Msa1408010 | 0.804294 | 2.315085e-49 | -8.615850e-47 |
| Msa0045790 | Msa1408010 | 0.815892 | 7.322407e-52 | -8.615850e-47 |
| Msa0046160 | Msa1408010 | 0.815400 | 9.426790e-52 | -8.615850e-47 |
| Msa0050390 | Msa1408010 | 0.818261 | 2.149867e-52 | -8.615850e-47 |
| Msa0054440 | Msa1408010 | 0.803629 | 3.181839e-49 | -8.615850e-47 |
| Msa0054480 | Msa1408010 | 0.838334 | 3.058605e-57 | -8.615850e-47 |
| Msa0055740 | Msa1408010 | 0.841315 | 5.120786e-58 | -8.615850e-47 |
| Msa0056450 | Msa1408010 | 0.803904 | 2.789551e-49 | -8.615850e-47 |
| Msa0057890 | Msa1408010 | 0.812667 | 3.778591e-51 | -8.615850e-47 |
| Msa0061340 | Msa1408010 | 0.810247 | 1.267403e-50 | -8.615850e-47 |
| Msa0074240 | Msa1408010 | 0.818515 | 1.882574e-52 | -8.615850e-47 |
| Msa0078900 | Msa1408010 | 0.804962 | 1.679452e-49 | -8.615850e-47 |
| Msa0079380 | Msa1408010 | 0.832397 | 9.674640e-56 | -8.615850e-47 |
| Msa0084380 | Msa1408010 | 0.806989 | 6.292395e-50 | -8.615850e-47 |
| Msa0089630 | Msa1408010 | 0.805907 | 1.063855e-49 | -8.615850e-47 |
| Msa0091210 | Msa1408010 | -0.806652 | 7.415165e-50 | -8.615850e-47 |
| Msa0103250 | Msa1408010 | 0.809243 | 2.083042e-50 | -8.615850e-47 |
| Msa0105070 | Msa1408010 | 0.813522 | 2.452611e-51 | -8.615850e-47 |
| Msa0106620 | Msa1408010 | 0.800373 | 1.486106e-48 | -8.615850e-47 |
| Msa0107640 | Msa1408010 | 0.813793 | 2.138574e-51 | -8.615850e-47 |
| Msa0109900 | Msa1408010 | 0.802727 | 4.889889e-49 | -8.615850e-47 |
| Msa1345220 | Msa1408010 | 0.802203 | 6.271470e-49 | -8.615850e-47 |
| Msa1345810 | Msa1408010 | 0.804320 | 2.286021e-49 | -8.615850e-47 |
| Msa1346370 | Msa1408010 | 0.827175 | 1.809180e-54 | -8.615850e-47 |
| Msa1348490 | Msa1408010 | 0.808750 | 2.657140e-50 | -8.615850e-47 |
| Msa1349520 | Msa1408010 | 0.805903 | 1.065975e-49 | -8.615850e-47 |
| Msa1353470 | Msa1408010 | 0.834747 | 2.506208e-56 | -8.615850e-47 |
| Msa1353980 | Msa1408010 | 0.803547 | 3.309715e-49 | -8.615850e-47 |
| Msa1358250 | Msa1408010 | 0.804327 | 2.278649e-49 | -8.615850e-47 |
| Msa1358670 | Msa1408010 | 0.809328 | 1.997769e-50 | -8.615850e-47 |
| Msa1359040 | Msa1408010 | 0.800577 | 1.350210e-48 | -8.615850e-47 |
| Msa1361400 | Msa1408010 | 0.808860 | 2.516568e-50 | -8.615850e-47 |
| Msa1365600 | Msa1408010 | 0.963745 | 1.836415e-122 | -8.615850e-47 |
| Msa1366600 | Msa1408010 | 0.802398 | 5.718659e-49 | -8.615850e-47 |
| Msa1368430 | Msa1408010 | 0.825365 | 4.878091e-54 | -8.615850e-47 |
| Msa1372760 | Msa1408010 | 0.802475 | 5.512961e-49 | -8.615850e-47 |
| Msa1375840 | Msa1408010 | 0.800277 | 1.553853e-48 | -8.615850e-47 |
| Msa1381480 | Msa1408010 | 0.808362 | 3.214805e-50 | -8.615850e-47 |
| Msa1382790 | Msa1408010 | 0.807520 | 4.856084e-50 | -8.615850e-47 |
| Msa1383230 | Msa1408010 | 0.806770 | 6.999918e-50 | -8.615850e-47 |
| Msa1384870 | Msa1408010 | 0.815810 | 7.639559e-52 | -8.615850e-47 |
| Msa1385000 | Msa1408010 | 0.810395 | 1.177562e-50 | -8.615850e-47 |
| Msa1392780 | Msa1408010 | 0.832010 | 1.206462e-55 | -8.615850e-47 |
| Msa1394730 | Msa1408010 | 0.832384 | 9.750442e-56 | -8.615850e-47 |
| Msa1408010 | Msa1408620 | -0.809310 | 2.015183e-50 | -8.615850e-47 |
| Msa1408010 | Msa1409880 | 0.805958 | 1.038334e-49 | -8.615850e-47 |
| Msa1408010 | Msa1423350 | 0.815042 | 1.132265e-51 | -8.615850e-47 |
| Msa1408010 | Msa1423870 | 0.834246 | 3.348952e-56 | -8.615850e-47 |
| Msa1408010 | Msa1423880 | 0.800551 | 1.366498e-48 | -8.615850e-47 |
| Msa1408010 | Msa1424680 | 0.808924 | 2.438795e-50 | -8.615850e-47 |
| Msa1408010 | Msa1424750 | 0.828372 | 9.324366e-55 | -8.615850e-47 |
| Msa1408010 | Msa1436480 | 0.816913 | 4.328397e-52 | -8.615850e-47 |
| Msa1408010 | Msa1440310 | 0.812171 | 4.848539e-51 | -8.615850e-47 |
| Msa1408010 | Msa1440740 | 0.802772 | 4.787060e-49 | -8.615850e-47 |
| Msa1408010 | Msa1442210 | 0.807971 | 3.895132e-50 | -8.615850e-47 |
| Msa1408010 | Msa1445390 | -0.800702 | 1.273250e-48 | -8.615850e-47 |
| Msa1408010 | Msa1447180 | 0.804825 | 1.794018e-49 | -8.615850e-47 |
| Msa1408010 | Msa1448640 | 0.802859 | 4.593270e-49 | -8.615850e-47 |
| Msa1408010 | Msa1449340 | -0.801865 | 7.358819e-49 | -8.615850e-47 |
| Msa1408010 | Msa1454570 | 0.805374 | 1.376532e-49 | -8.615850e-47 |
| Msa1408010 | Msa1457160 | 0.804477 | 2.119653e-49 | -8.615850e-47 |
| Msa1408010 | Msa1461300 | 0.829438 | 5.148864e-55 | -8.615850e-47 |
| Msa1408010 | Msa1461550 | 0.804216 | 2.402816e-49 | -8.615850e-47 |
| Msa1408010 | Msa1466540 | 0.850616 | 1.513710e-60 | -8.615850e-47 |
| Msa0604510 | Msa1408010 | 0.802270 | 6.074896e-49 | -8.615850e-47 |
| Msa0610840 | Msa1408010 | -0.805723 | 1.163386e-49 | -8.615850e-47 |
| Msa0613440 | Msa1408010 | 0.844311 | 8.178259e-59 | -8.615850e-47 |
| Msa0615440 | Msa1408010 | 0.800140 | 1.657073e-48 | -8.615850e-47 |
| Msa0623080 | Msa1408010 | 0.804834 | 1.785885e-49 | -8.615850e-47 |
| Msa0624470 | Msa1408010 | 0.809931 | 1.482160e-50 | -8.615850e-47 |
| Msa0625720 | Msa1408010 | 0.825208 | 5.314554e-54 | -8.615850e-47 |
| Msa0632740 | Msa1408010 | 0.801958 | 7.042660e-49 | -8.615850e-47 |
| Msa0636020 | Msa1408010 | 0.800242 | 1.580211e-48 | -8.615850e-47 |
| Msa0637900 | Msa1408010 | 0.804072 | 2.574581e-49 | -8.615850e-47 |
| Msa0658590 | Msa1408010 | 0.809738 | 1.631434e-50 | -8.615850e-47 |
| Msa0661320 | Msa1408010 | 0.807357 | 5.258777e-50 | -8.615850e-47 |
| Msa0661650 | Msa1408010 | 0.816410 | 5.610954e-52 | -8.615850e-47 |
| Msa0663390 | Msa1408010 | 0.811692 | 6.164140e-51 | -8.615850e-47 |
| Msa0664910 | Msa1408010 | 0.810251 | 1.264732e-50 | -8.615850e-47 |
| Msa0677410 | Msa1408010 | 0.822134 | 2.787335e-53 | -8.615850e-47 |
| Msa0679290 | Msa1408010 | -0.829613 | 4.667579e-55 | -8.615850e-47 |
| Msa0682330 | Msa1408010 | 0.801373 | 9.285876e-49 | -8.615850e-47 |
| Msa0682550 | Msa1408010 | 0.812730 | 3.658908e-51 | -8.615850e-47 |
| Msa0686560 | Msa1408010 | 0.812817 | 3.502538e-51 | -8.615850e-47 |
| Msa0689260 | Msa1408010 | 0.809518 | 1.818765e-50 | -8.615850e-47 |
| Msa0693380 | Msa1408010 | 0.807768 | 4.300744e-50 | -8.615850e-47 |
| Msa0697040 | Msa1408010 | 0.801605 | 8.321747e-49 | -8.615850e-47 |
| Msa0698920 | Msa1408010 | 0.822038 | 2.933207e-53 | -8.615850e-47 |
| Msa0701010 | Msa1408010 | 0.812124 | 4.963920e-51 | -8.615850e-47 |
| Msa0705190 | Msa1408010 | 0.816034 | 6.808904e-52 | -8.615850e-47 |
| Msa0710270 | Msa1408010 | 0.806011 | 1.011805e-49 | -8.615850e-47 |
| Msa0711780 | Msa1408010 | 0.812259 | 4.639911e-51 | -8.615850e-47 |
| Msa0715700 | Msa1408010 | 0.813026 | 3.152790e-51 | -8.615850e-47 |
| Msa0731940 | Msa1408010 | 0.834618 | 2.700218e-56 | -8.615850e-47 |
| Msa0735170 | Msa1408010 | 0.818693 | 1.715468e-52 | -8.615850e-47 |
| Msa0744040 | Msa1408010 | 0.801838 | 7.452854e-49 | -8.615850e-47 |
| Msa0745790 | Msa1408010 | 0.802438 | 5.609765e-49 | -8.615850e-47 |
| Msa0760130 | Msa1408010 | 0.811265 | 7.634138e-51 | -8.615850e-47 |
| Msa0762970 | Msa1408010 | 0.819355 | 1.212998e-52 | -8.615850e-47 |
| Msa0793800 | Msa1408010 | 0.811311 | 7.460877e-51 | -8.615850e-47 |
| Msa0794670 | Msa1408010 | 0.804309 | 2.298432e-49 | -8.615850e-47 |
| Msa0797250 | Msa1408010 | 0.812390 | 4.344180e-51 | -8.615850e-47 |
| Msa0797930 | Msa1408010 | 0.804189 | 2.434071e-49 | -8.615850e-47 |
| Msa0804730 | Msa1408010 | 0.807273 | 5.479581e-50 | -8.615850e-47 |
| Msa0810220 | Msa1408010 | 0.816980 | 4.181247e-52 | -8.615850e-47 |
| Msa0817650 | Msa1408010 | 0.801660 | 8.108665e-49 | -8.615850e-47 |
| Msa0824660 | Msa1408010 | 0.816740 | 4.732551e-52 | -8.615850e-47 |
| Msa0831530 | Msa1408010 | 0.814139 | 1.794067e-51 | -8.615850e-47 |
| Msa0831850 | Msa1408010 | 0.811150 | 8.084076e-51 | -8.615850e-47 |
| Msa0832340 | Msa1408010 | 0.814044 | 1.882661e-51 | -8.615850e-47 |
| Msa0834880 | Msa1408010 | 0.807741 | 4.358379e-50 | -8.615850e-47 |
| Msa0835800 | Msa1408010 | 0.822873 | 1.876513e-53 | -8.615850e-47 |
| Msa0123100 | Msa1408010 | 0.814844 | 1.252305e-51 | -8.615850e-47 |
| Msa0131330 | Msa1408010 | 0.802822 | 4.675003e-49 | -8.615850e-47 |
| Msa0138020 | Msa1408010 | 0.809732 | 1.636225e-50 | -8.615850e-47 |
| Msa0140500 | Msa1408010 | -0.801206 | 1.004262e-48 | -8.615850e-47 |
| Msa0149300 | Msa1408010 | 0.835975 | 1.226705e-56 | -8.615850e-47 |
| Msa0152400 | Msa1408010 | 0.802361 | 5.819294e-49 | -8.615850e-47 |
| Msa0157290 | Msa1408010 | 0.818797 | 1.624827e-52 | -8.615850e-47 |
| Msa0160550 | Msa1408010 | 0.800108 | 1.681959e-48 | -8.615850e-47 |
| Msa0165210 | Msa1408010 | 0.813276 | 2.777815e-51 | -8.615850e-47 |
| Msa0166560 | Msa1408010 | 0.816366 | 5.739247e-52 | -8.615850e-47 |
| Msa0171540 | Msa1408010 | 0.824520 | 7.720006e-54 | -8.615850e-47 |
| Msa0173990 | Msa1408010 | 0.807932 | 3.968771e-50 | -8.615850e-47 |
| Msa0174390 | Msa1408010 | 0.800569 | 1.355234e-48 | -8.615850e-47 |
| Msa0175780 | Msa1408010 | 0.813536 | 2.435157e-51 | -8.615850e-47 |
| Msa0187120 | Msa1408010 | 0.811000 | 8.714305e-51 | -8.615850e-47 |
| Msa0187830 | Msa1408010 | 0.800402 | 1.465621e-48 | -8.615850e-47 |
| Msa0188150 | Msa1408010 | 0.821890 | 3.174156e-53 | -8.615850e-47 |
| Msa0197520 | Msa1408010 | 0.811839 | 5.728240e-51 | -8.615850e-47 |
| Msa0197660 | Msa1408010 | 0.828884 | 7.015632e-55 | -8.615850e-47 |
| Msa0197780 | Msa1408010 | 0.813193 | 2.896643e-51 | -8.615850e-47 |
| Msa0204840 | Msa1408010 | 0.808938 | 2.421310e-50 | -8.615850e-47 |
| Msa0211150 | Msa1408010 | 0.825613 | 4.261533e-54 | -8.615850e-47 |
| Msa0212990 | Msa1408010 | 0.807126 | 5.884652e-50 | -8.615850e-47 |
| Msa0217700 | Msa1408010 | 0.801063 | 1.074392e-48 | -8.615850e-47 |
| Msa0218810 | Msa1408010 | 0.825641 | 4.195484e-54 | -8.615850e-47 |
| Msa1226470 | Msa1408010 | 0.817114 | 3.900683e-52 | -8.615850e-47 |
| Msa1235740 | Msa1408010 | 0.803344 | 3.646017e-49 | -8.615850e-47 |
| Msa1238820 | Msa1408010 | 0.806632 | 7.484539e-50 | -8.615850e-47 |
| Msa1238930 | Msa1408010 | 0.837673 | 4.524653e-57 | -8.615850e-47 |
| Msa1239920 | Msa1408010 | 0.814363 | 1.600975e-51 | -8.615850e-47 |
| Msa1257130 | Msa1408010 | 0.801237 | 9.897657e-49 | -8.615850e-47 |
| Msa1276660 | Msa1408010 | 0.812911 | 3.340624e-51 | -8.615850e-47 |
| Msa1277660 | Msa1408010 | 0.816901 | 4.353863e-52 | -8.615850e-47 |
| Msa1281510 | Msa1408010 | 0.804363 | 2.239102e-49 | -8.615850e-47 |
| Msa1284680 | Msa1408010 | 0.805109 | 1.564552e-49 | -8.615850e-47 |
| Msa1297290 | Msa1408010 | 0.810966 | 8.863738e-51 | -8.615850e-47 |
| Msa1298370 | Msa1408010 | 0.820401 | 6.992975e-53 | -8.615850e-47 |
| Msa1303250 | Msa1408010 | 0.807889 | 4.053172e-50 | -8.615850e-47 |
| Msa1313140 | Msa1408010 | 0.836910 | 7.094397e-57 | -8.615850e-47 |
| Msa1320410 | Msa1408010 | 0.818176 | 2.246962e-52 | -8.615850e-47 |
| Msa1328710 | Msa1408010 | 0.807565 | 4.749656e-50 | -8.615850e-47 |
| Msa1330170 | Msa1408010 | 0.801815 | 7.533713e-49 | -8.615850e-47 |
| Msa1332000 | Msa1408010 | 0.817393 | 3.375155e-52 | -8.615850e-47 |
| Msa1332760 | Msa1408010 | 0.817649 | 2.954933e-52 | -8.615850e-47 |
| Msa0366240 | Msa1408010 | 0.809179 | 2.150460e-50 | -8.615850e-47 |
| Msa0367870 | Msa1408010 | 0.812739 | 3.643019e-51 | -8.615850e-47 |
| Msa0378720 | Msa1408010 | 0.801437 | 9.006273e-49 | -8.615850e-47 |
| Msa0381610 | Msa1408010 | -0.806871 | 6.665258e-50 | -8.615850e-47 |
| Msa0388950 | Msa1408010 | 0.836765 | 7.724124e-57 | -8.615850e-47 |
| Msa0388960 | Msa1408010 | 0.803614 | 3.204896e-49 | -8.615850e-47 |
| Msa0389910 | Msa1408010 | 0.820288 | 7.425759e-53 | -8.615850e-47 |
| Msa0393080 | Msa1408010 | 0.807132 | 5.867448e-50 | -8.615850e-47 |
| Msa0395790 | Msa1408010 | 0.823457 | 1.371187e-53 | -8.615850e-47 |
| Msa0395820 | Msa1408010 | 0.803999 | 2.666714e-49 | -8.615850e-47 |
| Msa0405130 | Msa1408010 | 0.804705 | 1.900590e-49 | -8.615850e-47 |
| Msa0408300 | Msa1408010 | 0.802439 | 5.608565e-49 | -8.615850e-47 |
| Msa0422180 | Msa1408010 | 0.811023 | 8.613955e-51 | -8.615850e-47 |
| Msa0424320 | Msa1408010 | 0.804038 | 2.616231e-49 | -8.615850e-47 |
| Msa0428050 | Msa1408010 | 0.814791 | 1.287028e-51 | -8.615850e-47 |
| Msa0428080 | Msa1408010 | 0.815091 | 1.104284e-51 | -8.615850e-47 |
| Msa0434180 | Msa1408010 | 0.806663 | 7.375757e-50 | -8.615850e-47 |
| Msa0435690 | Msa1408010 | 0.806251 | 9.006140e-50 | -8.615850e-47 |
| Msa0438200 | Msa1408010 | 0.841794 | 3.828034e-58 | -8.615850e-47 |
| Msa0455760 | Msa1408010 | 0.800647 | 1.306443e-48 | -8.615850e-47 |
| Msa0464680 | Msa1408010 | 0.815759 | 7.839499e-52 | -8.615850e-47 |
| Msa0468320 | Msa1408010 | 0.802715 | 4.917774e-49 | -8.615850e-47 |
| Msa0468800 | Msa1408010 | 0.802645 | 5.083853e-49 | -8.615850e-47 |
| Msa0481530 | Msa1408010 | 0.804147 | 2.483790e-49 | -8.615850e-47 |
| Msa0980880 | Msa1408010 | 0.817568 | 3.083092e-52 | -8.615850e-47 |
| Msa0998690 | Msa1408010 | 0.804744 | 1.865273e-49 | -8.615850e-47 |
| Msa0999870 | Msa1408010 | 0.802025 | 6.823297e-49 | -8.615850e-47 |
| Msa1002000 | Msa1408010 | 0.811571 | 6.549606e-51 | -8.615850e-47 |
| Msa1003620 | Msa1408010 | 0.814340 | 1.619025e-51 | -8.615850e-47 |
| Msa1004840 | Msa1408010 | 0.805503 | 1.293359e-49 | -8.615850e-47 |
| Msa1006810 | Msa1408010 | 0.800219 | 1.596837e-48 | -8.615850e-47 |
| Msa1014540 | Msa1408010 | 0.832276 | 1.036542e-55 | -8.615850e-47 |
| Msa1016320 | Msa1408010 | 0.803730 | 3.032692e-49 | -8.615850e-47 |
| Msa1022820 | Msa1408010 | 0.800533 | 1.378250e-48 | -8.615850e-47 |
| Msa1024740 | Msa1408010 | 0.806858 | 6.708068e-50 | -8.615850e-47 |
| Msa1026940 | Msa1408010 | 0.802098 | 6.592477e-49 | -8.615850e-47 |
| Msa1028970 | Msa1408010 | 0.830267 | 3.234096e-55 | -8.615850e-47 |
| Msa1036410 | Msa1408010 | 0.814759 | 1.307835e-51 | -8.615850e-47 |
| Msa1038080 | Msa1408010 | 0.808596 | 2.865207e-50 | -8.615850e-47 |
| Msa1046300 | Msa1408010 | 0.805654 | 1.202496e-49 | -8.615850e-47 |
| Msa1046460 | Msa1408010 | 0.800948 | 1.134256e-48 | -8.615850e-47 |
| Msa1048160 | Msa1408010 | 0.803814 | 2.913227e-49 | -8.615850e-47 |
| Msa1052330 | Msa1408010 | 0.812077 | 5.083661e-51 | -8.615850e-47 |
| Msa1065390 | Msa1408010 | 0.814093 | 1.836073e-51 | -8.615850e-47 |
| Msa1075540 | Msa1408010 | 0.804071 | 2.575632e-49 | -8.615850e-47 |
| Msa1075650 | Msa1408010 | 0.841739 | 3.958843e-58 | -8.615850e-47 |
| Msa1080640 | Msa1408010 | 0.803021 | 4.252803e-49 | -8.615850e-47 |
| Msa1080960 | Msa1408010 | 0.832302 | 1.021483e-55 | -8.615850e-47 |
| Msa1082500 | Msa1408010 | 0.808906 | 2.460461e-50 | -8.615850e-47 |
| Msa1093530 | Msa1408010 | 0.802588 | 5.224111e-49 | -8.615850e-47 |
| Msa1095650 | Msa1408010 | 0.807454 | 5.014329e-50 | -8.615850e-47 |
| Msa1098250 | Msa1408010 | 0.800392 | 1.472397e-48 | -8.615850e-47 |
| Msa1098400 | Msa1408010 | 0.800646 | 1.307390e-48 | -8.615850e-47 |
| Msa1100050 | Msa1408010 | 0.819247 | 1.283656e-52 | -8.615850e-47 |
| Msa1101090 | Msa1408010 | 0.804428 | 2.170793e-49 | -8.615850e-47 |
| Msa0239800 | Msa1408010 | 0.829024 | 6.487915e-55 | -8.615850e-47 |
| Msa0241140 | Msa1408010 | 0.804791 | 1.823053e-49 | -8.615850e-47 |
| Msa0241190 | Msa1408010 | 0.840722 | 7.326747e-58 | -8.615850e-47 |
| Msa0254790 | Msa1408010 | 0.820545 | 6.481590e-53 | -8.615850e-47 |
| Msa0255550 | Msa1408010 | 0.803329 | 3.672394e-49 | -8.615850e-47 |
| Msa0257460 | Msa1408010 | 0.823112 | 1.650829e-53 | -8.615850e-47 |
| Msa0258310 | Msa1408010 | 0.804089 | 2.553495e-49 | -8.615850e-47 |
| Msa0262510 | Msa1408010 | 0.814129 | 1.802601e-51 | -8.615850e-47 |
| Msa0264150 | Msa1408010 | 0.817287 | 3.566749e-52 | -8.615850e-47 |
| Msa0264780 | Msa1408010 | 0.803669 | 3.122091e-49 | -8.615850e-47 |
| Msa0267370 | Msa1408010 | 0.814684 | 1.358797e-51 | -8.615850e-47 |
| Msa0271530 | Msa1408010 | 0.841778 | 3.866473e-58 | -8.615850e-47 |
| Msa0275000 | Msa1408010 | 0.839758 | 1.308180e-57 | -8.615850e-47 |
| Msa0280090 | Msa1408010 | 0.801072 | 1.070117e-48 | -8.615850e-47 |
| Msa0284350 | Msa1408010 | 0.813986 | 1.938750e-51 | -8.615850e-47 |
| Msa0288100 | Msa1408010 | 0.801567 | 8.471960e-49 | -8.615850e-47 |
| Msa0299870 | Msa1408010 | 0.801932 | 7.128820e-49 | -8.615850e-47 |
| Msa0300690 | Msa1408010 | 0.817035 | 4.062424e-52 | -8.615850e-47 |
| Msa0316900 | Msa1408010 | 0.801402 | 9.156930e-49 | -8.615850e-47 |
| Msa0316910 | Msa1408010 | 0.809444 | 1.886666e-50 | -8.615850e-47 |
| Msa0317510 | Msa1408010 | 0.829606 | 4.685052e-55 | -8.615850e-47 |
| Msa0317730 | Msa1408010 | 0.814622 | 1.402685e-51 | -8.615850e-47 |
| Msa0319170 | Msa1408010 | 0.802218 | 6.226340e-49 | -8.615850e-47 |
| Msa0321310 | Msa1408010 | 0.811002 | 8.703592e-51 | -8.615850e-47 |
| Msa0328070 | Msa1408010 | 0.803161 | 3.978065e-49 | -8.615850e-47 |
| Msa0330340 | Msa1408010 | 0.812551 | 4.004396e-51 | -8.615850e-47 |
| Msa0337620 | Msa1408010 | 0.824622 | 7.303529e-54 | -8.615850e-47 |
| Msa0337700 | Msa1408010 | 0.810602 | 1.062560e-50 | -8.615850e-47 |
| Msa0339250 | Msa1408010 | 0.815522 | 8.854773e-52 | -8.615850e-47 |
| Msa0340450 | Msa1408010 | 0.816510 | 5.329171e-52 | -8.615850e-47 |
| Msa0350990 | Msa1408010 | 0.818396 | 2.003981e-52 | -8.615850e-47 |
| Msa0351030 | Msa1408010 | 0.823882 | 1.090533e-53 | -8.615850e-47 |
| Msa0357020 | Msa1408010 | 0.804124 | 2.511675e-49 | -8.615850e-47 |
| Msa0358890 | Msa1408010 | 0.832548 | 8.875769e-56 | -8.615850e-47 |
| Msa0359030 | Msa1408010 | 0.812069 | 5.103821e-51 | -8.615850e-47 |
| Msa0363790 | Msa1408010 | 0.806291 | 8.835549e-50 | -8.615850e-47 |
| Msa1109680 | Msa1408010 | 0.848655 | 5.336395e-60 | -8.615850e-47 |
| Msa1110090 | Msa1408010 | 0.800659 | 1.299175e-48 | -8.615850e-47 |
| Msa1113170 | Msa1408010 | 0.818033 | 2.420836e-52 | -8.615850e-47 |
| Msa1117170 | Msa1408010 | 0.816273 | 6.021307e-52 | -8.615850e-47 |
| Msa1121480 | Msa1408010 | 0.800930 | 1.143778e-48 | -8.615850e-47 |
| Msa1121490 | Msa1408010 | 0.831764 | 1.387161e-55 | -8.615850e-47 |
| Msa1123380 | Msa1408010 | 0.806698 | 7.249302e-50 | -8.615850e-47 |
| Msa1135470 | Msa1408010 | 0.826676 | 2.381015e-54 | -8.615850e-47 |
| Msa1135890 | Msa1408010 | 0.805772 | 1.136074e-49 | -8.615850e-47 |
| Msa1137570 | Msa1408010 | 0.843341 | 1.487244e-58 | -8.615850e-47 |
| Msa1139890 | Msa1408010 | 0.813727 | 2.211499e-51 | -8.615850e-47 |
| Msa1142670 | Msa1408010 | 0.812911 | 3.341343e-51 | -8.615850e-47 |
| Msa1143020 | Msa1408010 | 0.812874 | 3.402752e-51 | -8.615850e-47 |
| Msa1144750 | Msa1408010 | 0.830882 | 2.285784e-55 | -8.615850e-47 |
| Msa1147900 | Msa1408010 | 0.828518 | 8.597800e-55 | -8.615850e-47 |
| Msa1154280 | Msa1408010 | 0.820497 | 6.647582e-53 | -8.615850e-47 |
| Msa1156020 | Msa1408010 | 0.807985 | 3.867720e-50 | -8.615850e-47 |
| Msa1162780 | Msa1408010 | 0.828855 | 7.129597e-55 | -8.615850e-47 |
| Msa1168160 | Msa1408010 | 0.822032 | 2.942751e-53 | -8.615850e-47 |
| Msa1181250 | Msa1408010 | 0.814413 | 1.559991e-51 | -8.615850e-47 |
| Msa1181330 | Msa1408010 | 0.809429 | 1.900898e-50 | -8.615850e-47 |
| Msa1193290 | Msa1408010 | 0.834952 | 2.225676e-56 | -8.615850e-47 |
| Msa1199570 | Msa1408010 | 0.810632 | 1.046405e-50 | -8.615850e-47 |
| Msa1199830 | Msa1408010 | -0.807254 | 5.530644e-50 | -8.615850e-47 |
| Msa1208430 | Msa1408010 | 0.803698 | 3.078639e-49 | -8.615850e-47 |
| Msa1208880 | Msa1408010 | 0.805765 | 1.139530e-49 | -8.615850e-47 |
| Msa1209460 | Msa1408010 | 0.802027 | 6.817977e-49 | -8.615850e-47 |
| Msa1210110 | Msa1408010 | 0.806002 | 1.016034e-49 | -8.615850e-47 |
| Msa1211140 | Msa1408010 | -0.802730 | 4.884038e-49 | -8.615850e-47 |
| Msa1219000 | Msa1408010 | 0.817205 | 3.721240e-52 | -8.615850e-47 |
| Msa1219010 | Msa1408010 | 0.812796 | 3.540558e-51 | -8.615850e-47 |
| Msa0484780 | Msa1408010 | 0.814825 | 1.265033e-51 | -8.615850e-47 |
| Msa0488560 | Msa1408010 | 0.804943 | 1.694396e-49 | -8.615850e-47 |
| Msa0490730 | Msa1408010 | -0.804486 | 2.110614e-49 | -8.615850e-47 |
| Msa0495330 | Msa1408010 | 0.818200 | 2.219228e-52 | -8.615850e-47 |
| Msa0503060 | Msa1408010 | 0.807620 | 4.624126e-50 | -8.615850e-47 |
| Msa0510930 | Msa1408010 | 0.800055 | 1.724157e-48 | -8.615850e-47 |
| Msa0512750 | Msa1408010 | 0.801619 | 8.266615e-49 | -8.615850e-47 |
| Msa0517090 | Msa1408010 | 0.825160 | 5.453916e-54 | -8.615850e-47 |
| Msa0518380 | Msa1408010 | 0.807864 | 4.104308e-50 | -8.615850e-47 |
| Msa0518440 | Msa1408010 | 0.800846 | 1.190163e-48 | -8.615850e-47 |
| Msa0521670 | Msa1408010 | 0.830361 | 3.066696e-55 | -8.615850e-47 |
| Msa0523940 | Msa1408010 | 0.803234 | 3.842259e-49 | -8.615850e-47 |
| Msa0529040 | Msa1408010 | 0.801048 | 1.082036e-48 | -8.615850e-47 |
| Msa0529890 | Msa1408010 | 0.829064 | 6.344907e-55 | -8.615850e-47 |
| Msa0530400 | Msa1408010 | 0.813363 | 2.659222e-51 | -8.615850e-47 |
| Msa0531180 | Msa1408010 | 0.810095 | 1.366570e-50 | -8.615850e-47 |
| Msa0532960 | Msa1408010 | 0.814798 | 1.282268e-51 | -8.615850e-47 |
| Msa0532980 | Msa1408010 | 0.835598 | 1.528392e-56 | -8.615850e-47 |
| Msa0532990 | Msa1408010 | 0.829780 | 4.249364e-55 | -8.615850e-47 |
| Msa0546680 | Msa1408010 | 0.820945 | 5.244755e-53 | -8.615850e-47 |
| Msa0547720 | Msa1408010 | 0.802607 | 5.177913e-49 | -8.615850e-47 |
| Msa0548150 | Msa1408010 | 0.826187 | 3.112289e-54 | -8.615850e-47 |
| Msa0569200 | Msa1408010 | 0.827116 | 1.869003e-54 | -8.615850e-47 |
| Msa0585230 | Msa1408010 | 0.805307 | 1.422022e-49 | -8.615850e-47 |
| Msa0585560 | Msa1408010 | 0.818093 | 2.345707e-52 | -8.615850e-47 |
| Msa0592440 | Msa1408010 | 0.804474 | 2.123460e-49 | -8.615850e-47 |
| Msa0593650 | Msa1408010 | 0.800407 | 1.462113e-48 | -8.615850e-47 |
| Msa0601750 | Msa1408010 | 0.806055 | 9.903295e-50 | -8.615850e-47 |
| Msa0842790 | Msa1408010 | 0.822573 | 2.204116e-53 | -8.615850e-47 |
| Msa0844490 | Msa1408010 | 0.806809 | 6.868369e-50 | -8.615850e-47 |
| Msa0850960 | Msa1408010 | 0.811974 | 5.353317e-51 | -8.615850e-47 |
| Msa0856910 | Msa1408010 | 0.804381 | 2.220557e-49 | -8.615850e-47 |
| Msa0861130 | Msa1408010 | 0.805116 | 1.558919e-49 | -8.615850e-47 |
| Msa0861510 | Msa1408010 | 0.807528 | 4.838183e-50 | -8.615850e-47 |
| Msa0861600 | Msa1408010 | 0.811052 | 8.487683e-51 | -8.615850e-47 |
| Msa0861930 | Msa1408010 | 0.803584 | 3.250650e-49 | -8.615850e-47 |
| Msa0868160 | Msa1408010 | 0.812915 | 3.334261e-51 | -8.615850e-47 |
| Msa0871270 | Msa1408010 | 0.813881 | 2.044701e-51 | -8.615850e-47 |
| Msa0873860 | Msa1408010 | 0.816466 | 5.450424e-52 | -8.615850e-47 |
| Msa0875290 | Msa1408010 | 0.813441 | 2.556291e-51 | -8.615850e-47 |
| Msa0876580 | Msa1408010 | 0.805962 | 1.036055e-49 | -8.615850e-47 |
| Msa0879080 | Msa1408010 | 0.905490 | 4.064625e-80 | -8.615850e-47 |
| Msa0880140 | Msa1408010 | 0.813310 | 2.730618e-51 | -8.615850e-47 |
| Msa0893950 | Msa1408010 | 0.814903 | 1.215426e-51 | -8.615850e-47 |
| Msa0896750 | Msa1408010 | 0.813679 | 2.265972e-51 | -8.615850e-47 |
| Msa0897330 | Msa1408010 | 0.822893 | 1.856658e-53 | -8.615850e-47 |
| Msa0902760 | Msa1408010 | 0.802057 | 6.719476e-49 | -8.615850e-47 |
| Msa0922410 | Msa1408010 | 0.803040 | 4.214734e-49 | -8.615850e-47 |
| Msa0923330 | Msa1408010 | 0.806375 | 8.480079e-50 | -8.615850e-47 |
| Msa0926890 | Msa1408010 | 0.814614 | 1.408545e-51 | -8.615850e-47 |
| Msa0932730 | Msa1408010 | 0.803075 | 4.144566e-49 | -8.615850e-47 |
| Msa0933100 | Msa1408010 | 0.822682 | 2.078347e-53 | -8.615850e-47 |
| Msa0936300 | Msa1408010 | 0.832559 | 8.824227e-56 | -8.615850e-47 |
| Msa0936390 | Msa1408010 | 0.841159 | 5.625455e-58 | -8.615850e-47 |
| Msa0938220 | Msa1408010 | 0.823277 | 1.510055e-53 | -8.615850e-47 |
| Msa0944660 | Msa1408010 | 0.803320 | 3.687867e-49 | -8.615850e-47 |
| Msa0960740 | Msa1408010 | 0.804608 | 1.990936e-49 | -8.615850e-47 |
| Msa0962840 | Msa1408010 | 0.800470 | 1.419734e-48 | -8.615850e-47 |
| Msa0964130 | Msa1408010 | 0.809088 | 2.249563e-50 | -8.615850e-47 |
| Msa0964310 | Msa1408010 | 0.802896 | 4.512134e-49 | -8.615850e-47 |
| Msa0969520 | Msa1408010 | 0.821860 | 3.225545e-53 | -8.615850e-47 |
| Msa0970420 | Msa1408010 | 0.804069 | 2.578250e-49 | -8.615850e-47 |
| Msa0973100 | Msa1408010 | 0.809983 | 1.444954e-50 | -8.615850e-47 |
| Msa0974070 | Msa1408010 | 0.828557 | 8.416780e-55 | -8.615850e-47 |
| Msa0974080 | Msa1408010 | 0.808138 | 3.588851e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408010 | MtrunA17_Chr5g0422001 | 67.314 | 309 | 41 | 4 | 126 | 425 | 25 | 282 | 2.91e-134 | 387 |
| Msa1408010 | MtrunA17_Chr5g0421951 | 66.557 | 305 | 37 | 6 | 126 | 421 | 30 | 278 | 3.65e-126 | 366 |
| Msa1408010 | MtrunA17_Chr5g0421951 | 59.155 | 71 | 23 | 4 | 1 | 70 | 1 | 66 | 4.13e-11 | 63.5 |
| Msa1408010 | MtrunA17_Chr6g0461801 | 69.565 | 161 | 25 | 4 | 126 | 275 | 30 | 177 | 1.02e-61 | 199 |
| Msa1408010 | MtrunA17_Chr6g0461801 | 61.429 | 70 | 21 | 4 | 1 | 70 | 1 | 64 | 4.00e-12 | 65.5 |
| Msa1408010 | MtrunA17_Chr6g0465351 | 87.500 | 64 | 8 | 0 | 276 | 339 | 4 | 67 | 4.30e-33 | 120 |
| Msa1408010 | MtrunA17_Chr6g0458841 | 44.954 | 109 | 34 | 3 | 130 | 226 | 1 | 95 | 2.29e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408010 | AT3G07930.3 | 34.507 | 426 | 192 | 12 | 12 | 421 | 88 | 442 | 5.72e-56 | 191 |
| Msa1408010 | AT3G07930.4 | 36.615 | 325 | 135 | 7 | 99 | 421 | 71 | 326 | 2.67e-52 | 178 |
| Msa1408010 | AT3G07930.2 | 31.429 | 280 | 152 | 11 | 12 | 275 | 88 | 343 | 1.77e-16 | 80.9 |
| Msa1408010 | AT3G07930.1 | 31.273 | 275 | 149 | 11 | 12 | 270 | 88 | 338 | 6.38e-15 | 76.3 |
Find 100 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAAACACCGGATAATAAT+TGG | 0.173506 | tig0023342:+39103 | Msa1408010:CDS |
| TTGCTACAAACATTGGATTT+TGG | 0.185344 | tig0023342:+43104 | Msa1408010:three_prime_UTR |
| ATAGTATATATTTCCTTTAA+TGG | 0.193423 | tig0023342:+42932 | Msa1408010:three_prime_UTR |
| AGGAAATAGAAGAGGTAATA+AGG | 0.220049 | tig0023342:+40873 | Msa1408010:CDS |
| TCTTCAACTTTCTGAAAATA+AGG | 0.234853 | tig0023342:-38610 | None:intergenic |
| CCGCAGCAGTCGACCATTAA+AGG | 0.260845 | tig0023342:-42945 | None:intergenic |
| CGAGAGTCATTGAAAATCTT+AGG | 0.262380 | tig0023342:-38991 | None:intergenic |
| ATATTCTTATCTAGCGGATT+TGG | 0.271351 | tig0023342:+41753 | Msa1408010:CDS |
| TCTTCAACTTTCTGAAAATA+AGG | 0.272553 | tig0023342:-38724 | None:intergenic |
| TCTTCAACTTTCTGAAAATA+AGG | 0.272553 | tig0023342:-38781 | None:intergenic |
| TCTTCAACTTTCTGAAAATA+AGG | 0.272553 | tig0023342:-38838 | None:intergenic |
| TTGAAGATTTAGAACAGTTT+AGG | 0.299387 | tig0023342:+38911 | Msa1408010:CDS |
| ATCACAAGCTGAACGAATAT+TGG | 0.299436 | tig0023342:+42823 | Msa1408010:CDS |
| CTCTTATTCTGCAGGCGGTT+TGG | 0.309125 | tig0023342:-41826 | None:intergenic |
| TCTTCAACTTCCTGAAAATA+AGG | 0.315866 | tig0023342:-38667 | None:intergenic |
| GCAACAATTAAAATACATAT+TGG | 0.348086 | tig0023342:-43017 | None:intergenic |
| AATGCTTACCGATGGGATAA+AGG | 0.380168 | tig0023342:+41780 | Msa1408010:CDS |
| AAGGGGAGTGGCGGAGGTTG+TGG | 0.394988 | tig0023342:+41705 | Msa1408010:intron |
| GAAGAGGTAATAAGGACATT+AGG | 0.402181 | tig0023342:+40881 | Msa1408010:CDS |
| ACCGATGGGATAAAGGTTGC+AGG | 0.404792 | tig0023342:+41787 | Msa1408010:CDS |
| TGCATACAAGTTTCTGCGTC+TGG | 0.405102 | tig0023342:-40839 | None:intergenic |
| TAAGGAGACACAACCCTCTC+TGG | 0.411809 | tig0023342:-38592 | None:intergenic |
| TAAGGAGACACGACCCTTTG+TGG | 0.442932 | tig0023342:-38649 | None:intergenic |
| TAAGGAGACACGACCCTTTG+TGG | 0.442932 | tig0023342:-38706 | None:intergenic |
| TAAGGAGACACGACCCTTTG+TGG | 0.442932 | tig0023342:-38763 | None:intergenic |
| CGCACTGTATTTATCTACAT+TGG | 0.449291 | tig0023342:+42892 | Msa1408010:three_prime_UTR |
| CATCTATCAGCCTTAAGAAA+AGG | 0.450995 | tig0023342:-39063 | None:intergenic |
| ATGGTCGACTGCTGCGGTGG+AGG | 0.460972 | tig0023342:+42951 | Msa1408010:three_prime_UTR |
| GAAAACACCGGATAATAATT+GGG | 0.469834 | tig0023342:+39104 | Msa1408010:CDS |
| GAATTTCCTTCGCAAAAGAA+AGG | 0.473593 | tig0023342:+42845 | Msa1408010:CDS |
| ATGTGCAAGGGGAGTGGCGG+AGG | 0.474312 | tig0023342:+41699 | Msa1408010:intron |
| CAATCACCCTCCATGGATCA+TGG | 0.476838 | tig0023342:-39185 | None:intergenic |
| GAACCGCACTCAAGGAAAAC+AGG | 0.477107 | tig0023342:+39224 | Msa1408010:CDS |
| TTTCAGTAAGTATGCGTACA+AGG | 0.478351 | tig0023342:+38468 | Msa1408010:CDS |
| GAAAGTTGAAGAGTGTAAAG+TGG | 0.483269 | tig0023342:+38735 | Msa1408010:CDS |
| GAAAGTTGAAGAGTGTAAAG+TGG | 0.483269 | tig0023342:+38792 | Msa1408010:CDS |
| GAAAGTTGAAGAGTGTAAAG+TGG | 0.483269 | tig0023342:+38849 | Msa1408010:CDS |
| CAAAGCTCTAACATATATGT+TGG | 0.487159 | tig0023342:+43073 | Msa1408010:three_prime_UTR |
| CATTAGGTCTTCAAGTGAAA+AGG | 0.489628 | tig0023342:+40897 | Msa1408010:CDS |
| GGATACATTGCTACAAACAT+TGG | 0.489639 | tig0023342:+43097 | Msa1408010:three_prime_UTR |
| CAAACCGCCTGCAGAATAAG+AGG | 0.490364 | tig0023342:+41827 | Msa1408010:CDS |
| CATGGAAATGAAACTCTTGA+AGG | 0.492533 | tig0023342:-39167 | None:intergenic |
| TTCTGCAGGCGGTTTGGACA+AGG | 0.494279 | tig0023342:-41820 | None:intergenic |
| AGTTTCATTTCCATGATCCA+TGG | 0.498865 | tig0023342:+39175 | Msa1408010:CDS |
| TAGAAAGAGTGTTGTTGAGG+TGG | 0.504482 | tig0023342:+38501 | Msa1408010:CDS |
| GAAAGTTGAAGAATGTAAAG+TGG | 0.513159 | tig0023342:+38621 | Msa1408010:CDS |
| TCCTGCAACCTTTATCCCAT+CGG | 0.514411 | tig0023342:-41788 | None:intergenic |
| AGGTGGATTCTTGTCATGCT+AGG | 0.519427 | tig0023342:+38518 | Msa1408010:CDS |
| TGGTCGACTGCTGCGGTGGA+GGG | 0.524228 | tig0023342:+42952 | Msa1408010:three_prime_UTR |
| GGATTCTTGTCATGCTAGGA+AGG | 0.538385 | tig0023342:+38522 | Msa1408010:CDS |
| CCTTTAATGGTCGACTGCTG+CGG | 0.542735 | tig0023342:+42945 | Msa1408010:three_prime_UTR |
| GGAGGCACCCAATTATTATC+CGG | 0.546937 | tig0023342:-39111 | None:intergenic |
| GGAAGTTGAAGAGTGTAAAG+TGG | 0.547408 | tig0023342:+38678 | Msa1408010:CDS |
| ACAATCACCTCTTATTCTGC+AGG | 0.548259 | tig0023342:-41834 | None:intergenic |
| TGTACGCAAACTCATTGTAA+TGG | 0.548351 | tig0023342:-38435 | None:intergenic |
| AGCTCTAACATATATGTTGG+AGG | 0.550645 | tig0023342:+43076 | Msa1408010:three_prime_UTR |
| TGGGATAAAGGTTGCAGGAA+CGG | 0.551303 | tig0023342:+41792 | Msa1408010:CDS |
| TTGGAGAAAATGCTTACCGA+TGG | 0.551660 | tig0023342:+41772 | Msa1408010:CDS |
| GATGTAGAGAGGCTTACAAA+AGG | 0.552426 | tig0023342:+39082 | Msa1408010:CDS |
| AAGAAGAGAGGAAATAGAAG+AGG | 0.558019 | tig0023342:+40865 | Msa1408010:CDS |
| CATATAGCAATCACCCTCCA+TGG | 0.559914 | tig0023342:-39192 | None:intergenic |
| TAAAGTGGAGCATCCACAAA+GGG | 0.564359 | tig0023342:+38636 | Msa1408010:CDS |
| AATGCTATGTGCAAGGGGAG+TGG | 0.564586 | tig0023342:+41693 | Msa1408010:intron |
| GAAAGTCGAAGAGTGTAAAG+TGG | 0.568900 | tig0023342:+38564 | Msa1408010:CDS |
| TAAAGTGGAGCATCCACAAA+GGG | 0.571179 | tig0023342:+38693 | Msa1408010:CDS |
| TAAAGTGGAGCATCCACAAA+GGG | 0.571179 | tig0023342:+38750 | Msa1408010:CDS |
| ATACTCTTGAACCGCACTCA+AGG | 0.580789 | tig0023342:+39216 | Msa1408010:CDS |
| TGGAGAAAATGCTTACCGAT+GGG | 0.583840 | tig0023342:+41773 | Msa1408010:CDS |
| TTAATGGTCGACTGCTGCGG+TGG | 0.587168 | tig0023342:+42948 | Msa1408010:three_prime_UTR |
| TCTTAGAAAGAGTGTTGTTG+AGG | 0.587653 | tig0023342:+38498 | Msa1408010:CDS |
| GAACGAGACACGACCCTCTG+TGG | 0.587983 | tig0023342:-38877 | None:intergenic |
| GTGAATACTTAACTGAGACT+TGG | 0.590610 | tig0023342:+40945 | Msa1408010:CDS |
| TCATTTCCATGATCCATGGA+GGG | 0.594814 | tig0023342:+39179 | Msa1408010:CDS |
| ACTGTGCAGTTCAGTAACAT+AGG | 0.599692 | tig0023342:-40969 | None:intergenic |
| TCTGCAGGCGGTTTGGACAA+GGG | 0.601494 | tig0023342:-41819 | None:intergenic |
| TCGTTCAGCTTGTGATCATG+TGG | 0.604250 | tig0023342:-42816 | None:intergenic |
| GACCGAAAGTTGAAAAGCCT+AGG | 0.611563 | tig0023342:+39019 | Msa1408010:CDS |
| GCTATGTGCAAGGGGAGTGG+CGG | 0.611636 | tig0023342:+41696 | Msa1408010:intron |
| TAAGGAGACACGACCCTCTG+TGG | 0.614957 | tig0023342:-38820 | None:intergenic |
| TAAAGTGGAGCATCCAGAGA+GGG | 0.616844 | tig0023342:+38579 | Msa1408010:CDS |
| TAAGGCTGATAGATGTAGAG+AGG | 0.618140 | tig0023342:+39071 | Msa1408010:CDS |
| TTCAGTAAGTATGCGTACAA+GGG | 0.620982 | tig0023342:+38469 | Msa1408010:CDS |
| TTGTACGCATACTTACTGAA+AGG | 0.621933 | tig0023342:-38466 | None:intergenic |
| ATCACCTCTTATTCTGCAGG+CGG | 0.622676 | tig0023342:-41831 | None:intergenic |
| TTCATTTCCATGATCCATGG+AGG | 0.624082 | tig0023342:+39178 | Msa1408010:CDS |
| AAATCTATATTCTTATCTAG+CGG | 0.630621 | tig0023342:+41747 | Msa1408010:CDS |
| GAGTCATTGAAAATCTTAGG+AGG | 0.634133 | tig0023342:-38988 | None:intergenic |
| GTAAAGTGGAGCATCCAGAG+AGG | 0.637261 | tig0023342:+38578 | Msa1408010:CDS |
| TAAAGTGGAGCATCCACAGA+GGG | 0.638542 | tig0023342:+38807 | Msa1408010:CDS |
| TAAAGTGGAGCATCCACAGA+GGG | 0.638542 | tig0023342:+38864 | Msa1408010:CDS |
| GTTACTGAACTGCACAGTGT+TGG | 0.647308 | tig0023342:+40974 | Msa1408010:CDS |
| ACGAGAGGACGTGTAGAACG+TGG | 0.649226 | tig0023342:-39132 | None:intergenic |
| TTGTATGCAAGTAAGAAGAG+AGG | 0.658799 | tig0023342:+40853 | Msa1408010:CDS |
| GGCTTACAAAAGGAAAACAC+CGG | 0.659818 | tig0023342:+39092 | Msa1408010:CDS |
| GTAAAGTGGAGCATCCACAA+AGG | 0.670334 | tig0023342:+38635 | Msa1408010:CDS |
| GTAAAGTGGAGCATCCACAA+AGG | 0.695425 | tig0023342:+38692 | Msa1408010:CDS |
| GTAAAGTGGAGCATCCACAA+AGG | 0.695425 | tig0023342:+38749 | Msa1408010:CDS |
| GTAAAGTGGAGCATCCACAG+AGG | 0.713286 | tig0023342:+38806 | Msa1408010:CDS |
| GTAAAGTGGAGCATCCACAG+AGG | 0.713286 | tig0023342:+38863 | Msa1408010:CDS |
| AGAGGACGTGTAGAACGTGG+AGG | 0.750477 | tig0023342:-39129 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATTATAATAATTTGA+GGG | - | tig0023342:41174-41193 | None:intergenic | 10.0% |
| !! | TCATGTATTAATAATAATTT+GGG | + | tig0023342:41934-41953 | Msa1408010:intron | 10.0% |
| !!! | CTTTTTTATAAAAATATTTG+AGG | - | tig0023342:42565-42584 | None:intergenic | 10.0% |
| !! | AATAAAAGAATATACTAAAG+AGG | + | tig0023342:40346-40365 | Msa1408010:intron | 15.0% |
| !! | CAATTGATTATAATAATTTG+AGG | - | tig0023342:41175-41194 | None:intergenic | 15.0% |
| !! | GTCATGTATTAATAATAATT+TGG | + | tig0023342:41933-41952 | Msa1408010:intron | 15.0% |
| !!! | AATTAATAGTATGACTTTTT+TGG | + | tig0023342:42321-42340 | Msa1408010:intron | 15.0% |
| !!! | TTTTATAAAAAAGTAGACTT+AGG | + | tig0023342:42572-42591 | Msa1408010:intron | 15.0% |
| !! | ATAGTATATATTTCCTTTAA+TGG | + | tig0023342:42932-42951 | Msa1408010:three_prime_UTR | 15.0% |
| !!! | AAAAACTAAACCTTTTCTTA+AGG | + | tig0023342:39053-39072 | Msa1408010:CDS | 20.0% |
| !!! | ATTTGAAATTTATCTTCTTG+AGG | + | tig0023342:39459-39478 | Msa1408010:intron | 20.0% |
| !! | CGAAATTATGATTAAGAATT+TGG | + | tig0023342:39491-39510 | Msa1408010:intron | 20.0% |
| !!! | AGTCTTTAAAAAAGAGAAAA+AGG | - | tig0023342:39691-39710 | None:intergenic | 20.0% |
| !!! | ACAATTAATATTTTACATGC+TGG | - | tig0023342:39831-39850 | None:intergenic | 20.0% |
| !! | TCGTAATTTAGAAATAAAGA+AGG | + | tig0023342:39855-39874 | Msa1408010:intron | 20.0% |
| !! | ATAAAGAAGGATAATGAATT+AGG | + | tig0023342:39868-39887 | Msa1408010:intron | 20.0% |
| !!! | ATGGAATTTTTTGTAATAAC+TGG | + | tig0023342:40035-40054 | Msa1408010:intron | 20.0% |
| !! | ATAATGTTAATGTAGTTACA+AGG | + | tig0023342:40226-40245 | Msa1408010:intron | 20.0% |
| !! | GATCAATTGGATTAATAATT+AGG | - | tig0023342:40258-40277 | None:intergenic | 20.0% |
| !! | GTTTGAGAATATGTTAAATT+AGG | + | tig0023342:40636-40655 | Msa1408010:intron | 20.0% |
| !! | GAATATGTTAAATTAGGAAA+CGG | + | tig0023342:40642-40661 | Msa1408010:intron | 20.0% |
| !! | AATATGTTAAATTAGGAAAC+GGG | + | tig0023342:40643-40662 | Msa1408010:intron | 20.0% |
| !!! | TCACTTTTAAAGTTACTTTT+AGG | + | tig0023342:41040-41059 | Msa1408010:intron | 20.0% |
| !!! | TTTTATGCTATGTGTAATTT+TGG | + | tig0023342:41091-41110 | Msa1408010:intron | 20.0% |
| !! | AAATCACTAAAAAAAACTAG+AGG | - | tig0023342:41119-41138 | None:intergenic | 20.0% |
| !!! | TAAAAACAAAAAACCCTTTT+TGG | + | tig0023342:41276-41295 | Msa1408010:intron | 20.0% |
| !!! | TAAGAATATAGATTTTCAGA+GGG | - | tig0023342:41742-41761 | None:intergenic | 20.0% |
| !!! | ATAAGAATATAGATTTTCAG+AGG | - | tig0023342:41743-41762 | None:intergenic | 20.0% |
| !! | AAATCTATATTCTTATCTAG+CGG | + | tig0023342:41747-41766 | Msa1408010:CDS | 20.0% |
| !! | ATTATTGAGTGTTATGTTAT+TGG | + | tig0023342:41880-41899 | Msa1408010:intron | 20.0% |
| !! | TATATGCAATTAACGAAATA+TGG | - | tig0023342:42627-42646 | None:intergenic | 20.0% |
| !!! | TTCTTTACATTGATTGATAT+CGG | + | tig0023342:42721-42740 | Msa1408010:intron | 20.0% |
| !! | GCAACAATTAAAATACATAT+TGG | - | tig0023342:43020-43039 | None:intergenic | 20.0% |
| !! | TCTTCAACTTTCTGAAAATA+AGG | - | tig0023342:38613-38632 | None:intergenic | 25.0% |
| !! | TCTTCAACTTTCTGAAAATA+AGG | - | tig0023342:38613-38632 | None:intergenic | 25.0% |
| !! | TCTTCAACTTTCTGAAAATA+AGG | - | tig0023342:38613-38632 | None:intergenic | 25.0% |
| !! | TCTTCAACTTTCTGAAAATA+AGG | - | tig0023342:38613-38632 | None:intergenic | 25.0% |
| !! | TTGAAGATTTAGAACAGTTT+AGG | + | tig0023342:38911-38930 | Msa1408010:CDS | 25.0% |
| ! | AACATCAGCATAAAATACAA+GGG | - | tig0023342:39280-39299 | None:intergenic | 25.0% |
| ! | AAACATCAGCATAAAATACA+AGG | - | tig0023342:39281-39300 | None:intergenic | 25.0% |
| ! | TACAGTATCATAATAAAGTC+AGG | - | tig0023342:39314-39333 | None:intergenic | 25.0% |
| !!! | ACTACTATTGTTTGTTGTTT+TGG | + | tig0023342:39389-39408 | Msa1408010:intron | 25.0% |
| ! | TGAATTCAAAATGACTCAAA+AGG | - | tig0023342:39641-39660 | None:intergenic | 25.0% |
| !! | TTTTCTACAGAACTACAAAA+AGG | - | tig0023342:39804-39823 | None:intergenic | 25.0% |
| ! | AAAAGAATATACTAAAGAGG+AGG | + | tig0023342:40349-40368 | Msa1408010:intron | 25.0% |
| ! | AAGTTATACAATTTCTGTTG+AGG | + | tig0023342:40376-40395 | Msa1408010:intron | 25.0% |
| !!! | TTCTATTATAAGCTTGTTGA+TGG | + | tig0023342:40465-40484 | Msa1408010:intron | 25.0% |
| !!! | ATGTACCATTTGCAATTTTT+TGG | + | tig0023342:40515-40534 | Msa1408010:intron | 25.0% |
| ! | ATAAGAAGCTAACTCAAAAT+AGG | - | tig0023342:40769-40788 | None:intergenic | 25.0% |
| ! | ACATAGCATAAAATACTAGA+GGG | - | tig0023342:41084-41103 | None:intergenic | 25.0% |
| ! | AAGAGATGAAAAACTATGAA+TGG | - | tig0023342:41146-41165 | None:intergenic | 25.0% |
| ! | CTTGATCTTCCAAAAATAAA+GGG | - | tig0023342:41581-41600 | None:intergenic | 25.0% |
| ! | TCTTGATCTTCCAAAAATAA+AGG | - | tig0023342:41582-41601 | None:intergenic | 25.0% |
| ! | ATAATCAAAATGAGTGAATC+TGG | + | tig0023342:41966-41985 | Msa1408010:intron | 25.0% |
| ! | ATAAAACAGATAGCATTACT+CGG | - | tig0023342:42361-42380 | None:intergenic | 25.0% |
| ! | TAGCAACGAAAATTGTAATT+AGG | + | tig0023342:42657-42676 | Msa1408010:intron | 25.0% |
| !! | ATCGGTTATATCTTTTAATC+AGG | + | tig0023342:42739-42758 | Msa1408010:intron | 25.0% |
| !! | ATATCTTTTAATCAGGTATG+CGG | + | tig0023342:42746-42765 | Msa1408010:intron | 25.0% |
| !!! | ATGTATTTTAATTGTTGCAG+TGG | + | tig0023342:43022-43041 | Msa1408010:three_prime_UTR | 25.0% |
| GAAAGTTGAAGAATGTAAAG+TGG | + | tig0023342:38621-38640 | Msa1408010:CDS | 30.0% | |
| TCTTCAACTTCCTGAAAATA+AGG | - | tig0023342:38670-38689 | None:intergenic | 30.0% | |
| ! | GTTTTTCTTTCTGATTTCCT+AGG | - | tig0023342:39039-39058 | None:intergenic | 30.0% |
| GAAAACACCGGATAATAATT+GGG | + | tig0023342:39104-39123 | Msa1408010:CDS | 30.0% | |
| ! | TTATGCTGATGTTTTACTGT+CGG | + | tig0023342:39287-39306 | Msa1408010:intron | 30.0% |
| !! | GTTTCTGATTTGCTTTACAA+TGG | + | tig0023342:39363-39382 | Msa1408010:intron | 30.0% |
| TCTAAACTGTTAATCGTCTT+CGG | + | tig0023342:39415-39434 | Msa1408010:intron | 30.0% | |
| TAAAACTCAACTGATGCAAA+CGG | - | tig0023342:39577-39596 | None:intergenic | 30.0% | |
| !!! | GGAACTGTTTTGAAAATGTT+GGG | - | tig0023342:39929-39948 | None:intergenic | 30.0% |
| ! | TTTTCAAAACAGTTCCGTTT+TGG | + | tig0023342:39933-39952 | Msa1408010:intron | 30.0% |
| TAATGGCAGCATAGTATTAA+TGG | + | tig0023342:39959-39978 | Msa1408010:intron | 30.0% | |
| AAATCCAAAACTGAACTGTT+CGG | - | tig0023342:39997-40016 | None:intergenic | 30.0% | |
| GTGTCAACATCTAACATTAT+TGG | + | tig0023342:40090-40109 | Msa1408010:intron | 30.0% | |
| AAGCTTATAATAGAAGCAAC+AGG | - | tig0023342:40460-40479 | None:intergenic | 30.0% | |
| TCACTCCAAAAAATTGCAAA+TGG | - | tig0023342:40523-40542 | None:intergenic | 30.0% | |
| GATTTGAGTAATGTCAAATG+AGG | + | tig0023342:40603-40622 | Msa1408010:intron | 30.0% | |
| !!! | CTTCTTATTTTGCAAAATGC+AGG | + | tig0023342:40781-40800 | Msa1408010:intron | 30.0% |
| AGGAAATAGAAGAGGTAATA+AGG | + | tig0023342:40873-40892 | Msa1408010:CDS | 30.0% | |
| CACATAGCATAAAATACTAG+AGG | - | tig0023342:41085-41104 | None:intergenic | 30.0% | |
| ! | AAACAAAAAACCCTTTTTGG+CGG | + | tig0023342:41279-41298 | Msa1408010:intron | 30.0% |
| ! | AGAAGATGCTTAATGCTTTT+TGG | + | tig0023342:41302-41321 | Msa1408010:intron | 30.0% |
| TTTGGTTGCTAGAATATTGA+AGG | + | tig0023342:41483-41502 | Msa1408010:intron | 30.0% | |
| !!! | CACATCTATCCCTTTATTTT+TGG | + | tig0023342:41569-41588 | Msa1408010:intron | 30.0% |
| ATCAAGATGACATAGTGATA+TGG | + | tig0023342:41595-41614 | Msa1408010:intron | 30.0% | |
| ATATGGAATGCAGAATTACA+TGG | + | tig0023342:41612-41631 | Msa1408010:intron | 30.0% | |
| TTACATGGTAAATACACAGT+AGG | + | tig0023342:41627-41646 | Msa1408010:intron | 30.0% | |
| AAAAGAAATGCTATGTGCAA+GGG | + | tig0023342:41687-41706 | Msa1408010:intron | 30.0% | |
| !! | ATATTCTTATCTAGCGGATT+TGG | + | tig0023342:41753-41772 | Msa1408010:CDS | 30.0% |
| ! | TGATGATGAGTTATAAATGC+TGG | + | tig0023342:42194-42213 | Msa1408010:intron | 30.0% |
| !! | AGTTTGTTAAGGTTCTTACA+GGG | + | tig0023342:42218-42237 | Msa1408010:intron | 30.0% |
| AAATATTTGAGGATCGACAA+TGG | - | tig0023342:42554-42573 | None:intergenic | 30.0% | |
| TTTATGTGAAACACAACTGA+TGG | + | tig0023342:42596-42615 | Msa1408010:intron | 30.0% | |
| ! | TAAACCACTGCAACAATTTT+TGG | - | tig0023342:43051-43070 | None:intergenic | 30.0% |
| ! | CAAAGCTCTAACATATATGT+TGG | + | tig0023342:43073-43092 | Msa1408010:three_prime_UTR | 30.0% |
| ! | TTGCTACAAACATTGGATTT+TGG | + | tig0023342:43104-43123 | Msa1408010:three_prime_UTR | 30.0% |
| TGTACGCAAACTCATTGTAA+TGG | - | tig0023342:38438-38457 | None:intergenic | 35.0% | |
| TTGTACGCATACTTACTGAA+AGG | - | tig0023342:38469-38488 | None:intergenic | 35.0% | |
| TTTCAGTAAGTATGCGTACA+AGG | + | tig0023342:38468-38487 | Msa1408010:CDS | 35.0% | |
| TTCAGTAAGTATGCGTACAA+GGG | + | tig0023342:38469-38488 | Msa1408010:CDS | 35.0% | |
| !! | TCTTAGAAAGAGTGTTGTTG+AGG | + | tig0023342:38498-38517 | Msa1408010:CDS | 35.0% |
| ! | GAAAGTTGAAGAGTGTAAAG+TGG | + | tig0023342:38735-38754 | Msa1408010:CDS | 35.0% |
| ! | GAAAGTTGAAGAGTGTAAAG+TGG | + | tig0023342:38735-38754 | Msa1408010:CDS | 35.0% |
| ! | GAAAGTTGAAGAGTGTAAAG+TGG | + | tig0023342:38735-38754 | Msa1408010:CDS | 35.0% |
| GAGTCATTGAAAATCTTAGG+AGG | - | tig0023342:38991-39010 | None:intergenic | 35.0% | |
| CGAGAGTCATTGAAAATCTT+AGG | - | tig0023342:38994-39013 | None:intergenic | 35.0% | |
| ! | TTCCTAGGCTTTTCAACTTT+CGG | - | tig0023342:39024-39043 | None:intergenic | 35.0% |
| CATCTATCAGCCTTAAGAAA+AGG | - | tig0023342:39066-39085 | None:intergenic | 35.0% | |
| GGAAAACACCGGATAATAAT+TGG | + | tig0023342:39103-39122 | Msa1408010:CDS | 35.0% | |
| CATGGAAATGAAACTCTTGA+AGG | - | tig0023342:39170-39189 | None:intergenic | 35.0% | |
| AGTTTCATTTCCATGATCCA+TGG | + | tig0023342:39175-39194 | Msa1408010:CDS | 35.0% | |
| TGATGACTACATGTTGAAAG+AGG | + | tig0023342:39545-39564 | Msa1408010:intron | 35.0% | |
| !!! | CGGAACTGTTTTGAAAATGT+TGG | - | tig0023342:39930-39949 | None:intergenic | 35.0% |
| !! | CAGTTCCGTTTTGGATATAA+TGG | + | tig0023342:39942-39961 | Msa1408010:intron | 35.0% |
| TGCTGCCATTATATCCAAAA+CGG | - | tig0023342:39950-39969 | None:intergenic | 35.0% | |
| ! | TATTCCGAACAGTTCAGTTT+TGG | + | tig0023342:39990-40009 | Msa1408010:intron | 35.0% |
| !!! | CAGTTCAGTTTTGGATTTAG+TGG | + | tig0023342:39999-40018 | Msa1408010:intron | 35.0% |
| TAGTGGCAGCTTACAATTAA+TGG | + | tig0023342:40016-40035 | Msa1408010:intron | 35.0% | |
| TGTTACAGTATGTCAAACAG+AGG | + | tig0023342:40149-40168 | Msa1408010:intron | 35.0% | |
| TGGATATGTGTGGTAGTTAT+GGG | - | tig0023342:40299-40318 | None:intergenic | 35.0% | |
| ATGGATATGTGTGGTAGTTA+TGG | - | tig0023342:40300-40319 | None:intergenic | 35.0% | |
| GATCATGTATAGGACAGTTA+TGG | - | tig0023342:40319-40338 | None:intergenic | 35.0% | |
| ATTCGAGTGTGATCATGTAT+AGG | - | tig0023342:40329-40348 | None:intergenic | 35.0% | |
| TAATAGAAGCAACAGGAAGA+TGG | - | tig0023342:40453-40472 | None:intergenic | 35.0% | |
| TTGAGTAATGTCAAATGAGG+TGG | + | tig0023342:40606-40625 | Msa1408010:intron | 35.0% | |
| TTGTATGCAAGTAAGAAGAG+AGG | + | tig0023342:40853-40872 | Msa1408010:CDS | 35.0% | |
| AAGAAGAGAGGAAATAGAAG+AGG | + | tig0023342:40865-40884 | Msa1408010:CDS | 35.0% | |
| GAAGAGGTAATAAGGACATT+AGG | + | tig0023342:40881-40900 | Msa1408010:CDS | 35.0% | |
| CATTAGGTCTTCAAGTGAAA+AGG | + | tig0023342:40897-40916 | Msa1408010:CDS | 35.0% | |
| GTGAATACTTAACTGAGACT+TGG | + | tig0023342:40945-40964 | Msa1408010:CDS | 35.0% | |
| !! | AGATGCTTAATGCTTTTTGG+TGG | + | tig0023342:41305-41324 | Msa1408010:intron | 35.0% |
| !! | GATGCTTAATGCTTTTTGGT+GGG | + | tig0023342:41306-41325 | Msa1408010:intron | 35.0% |
| !! | ATGCTTAATGCTTTTTGGTG+GGG | + | tig0023342:41307-41326 | Msa1408010:intron | 35.0% |
| CTAGAATATTGAAGGCTAGA+TGG | + | tig0023342:41491-41510 | Msa1408010:intron | 35.0% | |
| ATGTGATAGCTTCAGACATA+GGG | - | tig0023342:41554-41573 | None:intergenic | 35.0% | |
| ATGGTAAATACACAGTAGGT+CGG | + | tig0023342:41631-41650 | Msa1408010:intron | 35.0% | |
| GAAAAGAAATGCTATGTGCA+AGG | + | tig0023342:41686-41705 | Msa1408010:intron | 35.0% | |
| AAAGAAATGCTATGTGCAAG+GGG | + | tig0023342:41688-41707 | Msa1408010:intron | 35.0% | |
| ! | ATAGATTTTCAGAGGGACAT+GGG | - | tig0023342:41735-41754 | None:intergenic | 35.0% |
| ! | TATAGATTTTCAGAGGGACA+TGG | - | tig0023342:41736-41755 | None:intergenic | 35.0% |
| ACATGTATAATCAGCTTGCA+AGG | - | tig0023342:42140-42159 | None:intergenic | 35.0% | |
| !! | TTGGCTTTTTCCGTAATGAA+GGG | + | tig0023342:42170-42189 | Msa1408010:intron | 35.0% |
| !! | TAAATGCTGGCAGTTTGTTA+AGG | + | tig0023342:42207-42226 | Msa1408010:intron | 35.0% |
| !! | CAGTTTGTTAAGGTTCTTAC+AGG | + | tig0023342:42217-42236 | Msa1408010:intron | 35.0% |
| !! | TATCTTGACTTGTGACTTTG+AGG | + | tig0023342:42435-42454 | Msa1408010:intron | 35.0% |
| ! | TTGAGGTTAAGTTTGTTCAG+AGG | + | tig0023342:42452-42471 | Msa1408010:intron | 35.0% |
| ! | GCATATGCGATATTTTGTAC+AGG | + | tig0023342:42774-42793 | Msa1408010:CDS | 35.0% |
| ! | GATATTTTGTACAGGCAAGT+GGG | + | tig0023342:42782-42801 | Msa1408010:CDS | 35.0% |
| ATCACAAGCTGAACGAATAT+TGG | + | tig0023342:42823-42842 | Msa1408010:CDS | 35.0% | |
| GAATTTCCTTCGCAAAAGAA+AGG | + | tig0023342:42845-42864 | Msa1408010:CDS | 35.0% | |
| ! | ATGTATCCTTTCTTTTGCGA+AGG | - | tig0023342:42854-42873 | None:intergenic | 35.0% |
| CGCACTGTATTTATCTACAT+TGG | + | tig0023342:42892-42911 | Msa1408010:three_prime_UTR | 35.0% | |
| GTTTCCAAAAATTGTTGCAG+TGG | + | tig0023342:43044-43063 | Msa1408010:three_prime_UTR | 35.0% | |
| ! | AGCTCTAACATATATGTTGG+AGG | + | tig0023342:43076-43095 | Msa1408010:three_prime_UTR | 35.0% |
| GGATACATTGCTACAAACAT+TGG | + | tig0023342:43097-43116 | Msa1408010:three_prime_UTR | 35.0% | |
| ! | TGTGAACATGTTTTGCAATC+TGG | + | tig0023342:43156-43175 | Msa1408010:three_prime_UTR | 35.0% |
| !! | TAGAAAGAGTGTTGTTGAGG+TGG | + | tig0023342:38501-38520 | Msa1408010:CDS | 40.0% |
| ! | GAAAGTCGAAGAGTGTAAAG+TGG | + | tig0023342:38564-38583 | Msa1408010:CDS | 40.0% |
| ! | TAAAGTGGAGCATCCACAAA+GGG | + | tig0023342:38636-38655 | Msa1408010:CDS | 40.0% |
| ! | GGAAGTTGAAGAGTGTAAAG+TGG | + | tig0023342:38678-38697 | Msa1408010:CDS | 40.0% |
| ! | TAAAGTGGAGCATCCACAAA+GGG | + | tig0023342:38636-38655 | Msa1408010:CDS | 40.0% |
| ! | TAAAGTGGAGCATCCACAAA+GGG | + | tig0023342:38636-38655 | Msa1408010:CDS | 40.0% |
| TAAGGCTGATAGATGTAGAG+AGG | + | tig0023342:39071-39090 | Msa1408010:CDS | 40.0% | |
| GATGTAGAGAGGCTTACAAA+AGG | + | tig0023342:39082-39101 | Msa1408010:CDS | 40.0% | |
| GGCTTACAAAAGGAAAACAC+CGG | + | tig0023342:39092-39111 | Msa1408010:CDS | 40.0% | |
| TTCATTTCCATGATCCATGG+AGG | + | tig0023342:39178-39197 | Msa1408010:CDS | 40.0% | |
| TCATTTCCATGATCCATGGA+GGG | + | tig0023342:39179-39198 | Msa1408010:CDS | 40.0% | |
| ! | TGAAAATGTTGGGCACTGTT+TGG | - | tig0023342:39919-39938 | None:intergenic | 40.0% |
| AGGACAGTTATGGATATGTG+TGG | - | tig0023342:40309-40328 | None:intergenic | 40.0% | |
| ! | TCTGTTGAGGTATGCTTTTG+CGG | + | tig0023342:40389-40408 | Msa1408010:intron | 40.0% |
| TGTCAAATGAGGTGGATACA+TGG | + | tig0023342:40614-40633 | Msa1408010:intron | 40.0% | |
| ACTGTGCAGTTCAGTAACAT+AGG | - | tig0023342:40972-40991 | None:intergenic | 40.0% | |
| GTAATCGGAGCAAAGGAATT+CGG | + | tig0023342:41335-41354 | Msa1408010:intron | 40.0% | |
| ! | TCTATCCCTCTCTTAGCTTT+GGG | - | tig0023342:41388-41407 | None:intergenic | 40.0% |
| ATCTATCCCTCTCTTAGCTT+TGG | - | tig0023342:41389-41408 | None:intergenic | 40.0% | |
| TTAGCCATGTTAACCAAGCA+AGG | + | tig0023342:41433-41452 | Msa1408010:intron | 40.0% | |
| TAGCCATGTTAACCAAGCAA+GGG | + | tig0023342:41434-41453 | Msa1408010:intron | 40.0% | |
| GTGGAATATGCTATGCAAGT+CGG | + | tig0023342:41456-41475 | Msa1408010:intron | 40.0% | |
| ! | GCTATGCAAGTCGGATATTT+TGG | + | tig0023342:41465-41484 | Msa1408010:intron | 40.0% |
| TTGAAGGCTAGATGGTGAAT+AGG | + | tig0023342:41499-41518 | Msa1408010:intron | 40.0% | |
| TGAAGGCTAGATGGTGAATA+GGG | + | tig0023342:41500-41519 | Msa1408010:intron | 40.0% | |
| GGTGAATAGGGGATGTATAA+AGG | + | tig0023342:41512-41531 | Msa1408010:intron | 40.0% | |
| TAGGGGATGTATAAAGGTGA+AGG | + | tig0023342:41518-41537 | Msa1408010:intron | 40.0% | |
| GATGTGATAGCTTCAGACAT+AGG | - | tig0023342:41555-41574 | None:intergenic | 40.0% | |
| TGGTAAATACACAGTAGGTC+GGG | + | tig0023342:41632-41651 | Msa1408010:intron | 40.0% | |
| TTGGAGAAAATGCTTACCGA+TGG | + | tig0023342:41772-41791 | Msa1408010:CDS | 40.0% | |
| TGGAGAAAATGCTTACCGAT+GGG | + | tig0023342:41773-41792 | Msa1408010:CDS | 40.0% | |
| AATGCTTACCGATGGGATAA+AGG | + | tig0023342:41780-41799 | Msa1408010:CDS | 40.0% | |
| ACAATCACCTCTTATTCTGC+AGG | - | tig0023342:41837-41856 | None:intergenic | 40.0% | |
| GCAAGCTGATTATACATGTG+CGG | + | tig0023342:42141-42160 | Msa1408010:intron | 40.0% | |
| TATACATGTGCGGTTGATCT+TGG | + | tig0023342:42151-42170 | Msa1408010:intron | 40.0% | |
| !! | CTTGGCTTTTTCCGTAATGA+AGG | + | tig0023342:42169-42188 | Msa1408010:intron | 40.0% |
| TCATCATCAGCCCTTCATTA+CGG | - | tig0023342:42183-42202 | None:intergenic | 40.0% | |
| TTGTTAAGGTTCTTACAGGG+TGG | + | tig0023342:42221-42240 | Msa1408010:intron | 40.0% | |
| AACATATCAGTCTCACCTTC+TGG | - | tig0023342:42268-42287 | None:intergenic | 40.0% | |
| TGTGAAACACAACTGATGGT+AGG | + | tig0023342:42600-42619 | Msa1408010:intron | 40.0% | |
| ! | TCTTTTAATCAGGTATGCGG+CGG | + | tig0023342:42749-42768 | Msa1408010:intron | 40.0% |
| ! | CGATATTTTGTACAGGCAAG+TGG | + | tig0023342:42781-42800 | Msa1408010:CDS | 40.0% |
| ! | AGGTGGATTCTTGTCATGCT+AGG | + | tig0023342:38518-38537 | Msa1408010:CDS | 45.0% |
| GGATTCTTGTCATGCTAGGA+AGG | + | tig0023342:38522-38541 | Msa1408010:CDS | 45.0% | |
| ! | TAAAGTGGAGCATCCAGAGA+GGG | + | tig0023342:38579-38598 | Msa1408010:CDS | 45.0% |
| ! | GTAAAGTGGAGCATCCACAA+AGG | + | tig0023342:38635-38654 | Msa1408010:CDS | 45.0% |
| !!! | GGTCGTGTCTCCTTATTTTC+AGG | + | tig0023342:38657-38676 | Msa1408010:CDS | 45.0% |
| ! | GTAAAGTGGAGCATCCACAA+AGG | + | tig0023342:38635-38654 | Msa1408010:CDS | 45.0% |
| ! | GTAAAGTGGAGCATCCACAA+AGG | + | tig0023342:38635-38654 | Msa1408010:CDS | 45.0% |
| ! | TAAAGTGGAGCATCCACAGA+GGG | + | tig0023342:38807-38826 | Msa1408010:CDS | 45.0% |
| ! | TAAAGTGGAGCATCCACAGA+GGG | + | tig0023342:38807-38826 | Msa1408010:CDS | 45.0% |
| GACCGAAAGTTGAAAAGCCT+AGG | + | tig0023342:39019-39038 | Msa1408010:CDS | 45.0% | |
| !! | GGAGGCACCCAATTATTATC+CGG | - | tig0023342:39114-39133 | None:intergenic | 45.0% |
| !! | AGGAGACGCTTTTTAACGAG+AGG | - | tig0023342:39150-39169 | None:intergenic | 45.0% |
| CATATAGCAATCACCCTCCA+TGG | - | tig0023342:39195-39214 | None:intergenic | 45.0% | |
| ATACTCTTGAACCGCACTCA+AGG | + | tig0023342:39216-39235 | Msa1408010:CDS | 45.0% | |
| ! | GTACCTGTTTTCCTTGAGTG+CGG | - | tig0023342:39230-39249 | None:intergenic | 45.0% |
| CGTAAAGAACAGTAGCACAG+TGG | + | tig0023342:39662-39681 | Msa1408010:intron | 45.0% | |
| AAAGAACAGTAGCACAGTGG+CGG | + | tig0023342:39665-39684 | Msa1408010:intron | 45.0% | |
| CTGCTCTGCAATACTCTGTT+TGG | + | tig0023342:39729-39748 | Msa1408010:intron | 45.0% | |
| CTGCAATACTCTGTTTGGAC+AGG | + | tig0023342:39734-39753 | Msa1408010:intron | 45.0% | |
| GTGTGGTAGTTATGGGACAA+GGG | - | tig0023342:40292-40311 | None:intergenic | 45.0% | |
| TGTGTGGTAGTTATGGGACA+AGG | - | tig0023342:40293-40312 | None:intergenic | 45.0% | |
| TCAACGACACGCAAGATGTT+GGG | - | tig0023342:40680-40699 | None:intergenic | 45.0% | |
| TGCATACAAGTTTCTGCGTC+TGG | - | tig0023342:40842-40861 | None:intergenic | 45.0% | |
| GTTACTGAACTGCACAGTGT+TGG | + | tig0023342:40974-40993 | Msa1408010:CDS | 45.0% | |
| AGCATCTTCTCCGCCAAAAA+GGG | - | tig0023342:41292-41311 | None:intergenic | 45.0% | |
| AAGCATCTTCTCCGCCAAAA+AGG | - | tig0023342:41293-41312 | None:intergenic | 45.0% | |
| !! | CTTAATGCTTTTTGGTGGGG+AGG | + | tig0023342:41310-41329 | Msa1408010:intron | 45.0% |
| TCATGTCCCAAAGCTAAGAG+AGG | + | tig0023342:41379-41398 | Msa1408010:intron | 45.0% | |
| CATGTCCCAAAGCTAAGAGA+GGG | + | tig0023342:41380-41399 | Msa1408010:intron | 45.0% | |
| TAGCATATTCCACCCTTGCT+TGG | - | tig0023342:41449-41468 | None:intergenic | 45.0% | |
| GAAGGCTAGATGGTGAATAG+GGG | + | tig0023342:41501-41520 | Msa1408010:intron | 45.0% | |
| TCCTGCAACCTTTATCCCAT+CGG | - | tig0023342:41791-41810 | None:intergenic | 45.0% | |
| TGGGATAAAGGTTGCAGGAA+CGG | + | tig0023342:41792-41811 | Msa1408010:CDS | 45.0% | |
| ATCACCTCTTATTCTGCAGG+CGG | - | tig0023342:41834-41853 | None:intergenic | 45.0% | |
| GAGCAGTACAATTGCATGCA+GGG | + | tig0023342:42053-42072 | Msa1408010:intron | 45.0% | |
| AAAGATCTGTGACTGTCCAG+AGG | - | tig0023342:42085-42104 | None:intergenic | 45.0% | |
| CTGGACAGTCACAGATCTTT+AGG | + | tig0023342:42085-42104 | Msa1408010:intron | 45.0% | |
| CTGGCACACTGAATTCAAGT+TGG | - | tig0023342:42249-42268 | None:intergenic | 45.0% | |
| CTTGAATTCAGTGTGCCAGA+AGG | + | tig0023342:42250-42269 | Msa1408010:intron | 45.0% | |
| TGTTGCTGAAAGCTGTCTGT+TGG | + | tig0023342:42284-42303 | Msa1408010:intron | 45.0% | |
| GTTGCTGAAAGCTGTCTGTT+GGG | + | tig0023342:42285-42304 | Msa1408010:intron | 45.0% | |
| TCGTTCAGCTTGTGATCATG+TGG | - | tig0023342:42819-42838 | None:intergenic | 45.0% | |
| GTGGAGGGAAAAATATGGTG+AGG | + | tig0023342:42967-42986 | Msa1408010:three_prime_UTR | 45.0% | |
| GGGAAAAATATGGTGAGGCA+TGG | + | tig0023342:42972-42991 | Msa1408010:three_prime_UTR | 45.0% | |
| ! | GTAAAGTGGAGCATCCAGAG+AGG | + | tig0023342:38578-38597 | Msa1408010:CDS | 50.0% |
| TAAGGAGACACAACCCTCTC+TGG | - | tig0023342:38595-38614 | None:intergenic | 50.0% | |
| TAAGGAGACACGACCCTTTG+TGG | - | tig0023342:38652-38671 | None:intergenic | 50.0% | |
| TAAGGAGACACGACCCTTTG+TGG | - | tig0023342:38652-38671 | None:intergenic | 50.0% | |
| TAAGGAGACACGACCCTTTG+TGG | - | tig0023342:38652-38671 | None:intergenic | 50.0% | |
| ! | GTAAAGTGGAGCATCCACAG+AGG | + | tig0023342:38806-38825 | Msa1408010:CDS | 50.0% |
| ! | GTAAAGTGGAGCATCCACAG+AGG | + | tig0023342:38806-38825 | Msa1408010:CDS | 50.0% |
| CAATCACCCTCCATGGATCA+TGG | - | tig0023342:39188-39207 | None:intergenic | 50.0% | |
| GAACCGCACTCAAGGAAAAC+AGG | + | tig0023342:39224-39243 | Msa1408010:CDS | 50.0% | |
| GGAGGGAGGATTCGATCAAT+TGG | - | tig0023342:40271-40290 | None:intergenic | 50.0% | |
| GGTAGTTATGGGACAAGGGA+GGG | - | tig0023342:40288-40307 | None:intergenic | 50.0% | |
| TGGTAGTTATGGGACAAGGG+AGG | - | tig0023342:40289-40308 | None:intergenic | 50.0% | |
| GTCAACGACACGCAAGATGT+TGG | - | tig0023342:40681-40700 | None:intergenic | 50.0% | |
| !! | AATGCTTTTTGGTGGGGAGG+AGG | + | tig0023342:41313-41332 | Msa1408010:intron | 50.0% |
| TTTGGTGGGGAGGAGGTAAT+CGG | + | tig0023342:41320-41339 | Msa1408010:intron | 50.0% | |
| ATCGGAGCAAAGGAATTCGG+TGG | + | tig0023342:41338-41357 | Msa1408010:intron | 50.0% | |
| ! | GAGCAAAGGAATTCGGTGGT+TGG | + | tig0023342:41342-41361 | Msa1408010:intron | 50.0% |
| ! | AAGGAATTCGGTGGTTGGCT+TGG | + | tig0023342:41347-41366 | Msa1408010:intron | 50.0% |
| !! | AGGAATTCGGTGGTTGGCTT+GGG | + | tig0023342:41348-41367 | Msa1408010:intron | 50.0% |
| CCACCCTTGCTTGGTTAACA+TGG | - | tig0023342:41440-41459 | None:intergenic | 50.0% | |
| CCATGTTAACCAAGCAAGGG+TGG | + | tig0023342:41437-41456 | Msa1408010:intron | 50.0% | |
| AATGCTATGTGCAAGGGGAG+TGG | + | tig0023342:41693-41712 | Msa1408010:intron | 50.0% | |
| ACCGATGGGATAAAGGTTGC+AGG | + | tig0023342:41787-41806 | Msa1408010:CDS | 50.0% | |
| CTCTTATTCTGCAGGCGGTT+TGG | - | tig0023342:41829-41848 | None:intergenic | 50.0% | |
| CAAACCGCCTGCAGAATAAG+AGG | + | tig0023342:41827-41846 | Msa1408010:CDS | 50.0% | |
| GAACCTCAAACACATGCCTC+CGG | + | tig0023342:41988-42007 | Msa1408010:intron | 50.0% | |
| ATGCCTCCGGTTCAGATTGT+AGG | + | tig0023342:42001-42020 | Msa1408010:intron | 50.0% | |
| CACAGGCTGTGTTTGCAGAA+TGG | + | tig0023342:42029-42048 | Msa1408010:intron | 50.0% | |
| CGAGCAGTACAATTGCATGC+AGG | + | tig0023342:42052-42071 | Msa1408010:intron | 50.0% | |
| TGTCTGTTGGGTGCAAGAAC+TGG | + | tig0023342:42297-42316 | Msa1408010:intron | 50.0% | |
| GTCTGTTGGGTGCAAGAACT+GGG | + | tig0023342:42298-42317 | Msa1408010:intron | 50.0% | |
| TGTTCAGAGGCAAGCGAACA+TGG | + | tig0023342:42465-42484 | Msa1408010:intron | 50.0% | |
| CCTTTAATGGTCGACTGCTG+CGG | + | tig0023342:42945-42964 | Msa1408010:three_prime_UTR | 50.0% | |
| CTGCGGTGGAGGGAAAAATA+TGG | + | tig0023342:42962-42981 | Msa1408010:three_prime_UTR | 50.0% | |
| TAAGGAGACACGACCCTCTG+TGG | - | tig0023342:38823-38842 | None:intergenic | 55.0% | |
| AGAGGACGTGTAGAACGTGG+AGG | - | tig0023342:39132-39151 | None:intergenic | 55.0% | |
| ACGAGAGGACGTGTAGAACG+TGG | - | tig0023342:39135-39154 | None:intergenic | 55.0% | |
| AGTTATGGGACAAGGGAGGG+AGG | - | tig0023342:40285-40304 | None:intergenic | 55.0% | |
| GGAGGAGGTAATCGGAGCAA+AGG | + | tig0023342:41328-41347 | Msa1408010:intron | 55.0% | |
| ! | TCTGCAGGCGGTTTGGACAA+GGG | - | tig0023342:41822-41841 | None:intergenic | 55.0% |
| ! | TTCTGCAGGCGGTTTGGACA+AGG | - | tig0023342:41823-41842 | None:intergenic | 55.0% |
| GGATGTGTGTGCGTGTGAAG+AGG | + | tig0023342:41901-41920 | Msa1408010:intron | 55.0% | |
| ! | GAACCGGAGGCATGTGTTTG+AGG | - | tig0023342:41994-42013 | None:intergenic | 55.0% |
| GTCGCGCCTACAATCTGAAC+CGG | - | tig0023342:42010-42029 | None:intergenic | 55.0% | |
| TCAGATTGTAGGCGCGACAC+AGG | + | tig0023342:42012-42031 | Msa1408010:intron | 55.0% | |
| GCATGCAGGGATTTCACCTC+TGG | + | tig0023342:42066-42085 | Msa1408010:intron | 55.0% | |
| CCGCAGCAGTCGACCATTAA+AGG | - | tig0023342:42948-42967 | None:intergenic | 55.0% | |
| TTAATGGTCGACTGCTGCGG+TGG | + | tig0023342:42948-42967 | Msa1408010:three_prime_UTR | 55.0% | |
| GAACGAGACACGACCCTCTG+TGG | - | tig0023342:38880-38899 | None:intergenic | 60.0% | |
| GCTATGTGCAAGGGGAGTGG+CGG | + | tig0023342:41696-41715 | Msa1408010:intron | 60.0% | |
| GCGCCTACAATCTGAACCGG+AGG | - | tig0023342:42007-42026 | None:intergenic | 60.0% | |
| ATGTGCAAGGGGAGTGGCGG+AGG | + | tig0023342:41699-41718 | Msa1408010:intron | 65.0% | |
| ! | AAGGGGAGTGGCGGAGGTTG+TGG | + | tig0023342:41705-41724 | Msa1408010:intron | 65.0% |
| ATGGTCGACTGCTGCGGTGG+AGG | + | tig0023342:42951-42970 | Msa1408010:three_prime_UTR | 65.0% | |
| TGGTCGACTGCTGCGGTGGA+GGG | + | tig0023342:42952-42971 | Msa1408010:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023342 | gene | 38424 | 43214 | 38424 | ID=Msa1408010;Name=Msa1408010 |
| tig0023342 | mRNA | 38424 | 43214 | 38424 | ID=Msa1408010-mRNA-1;Parent=Msa1408010;Name=Msa1408010-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.33|0.5|0.75|0.66|0.75|4|336|425 |
| tig0023342 | exon | 38424 | 39245 | 38424 | ID=Msa1408010-mRNA-1:exon:25443;Parent=Msa1408010-mRNA-1 |
| tig0023342 | exon | 40803 | 40999 | 40803 | ID=Msa1408010-mRNA-1:exon:25444;Parent=Msa1408010-mRNA-1 |
| tig0023342 | exon | 41708 | 41848 | 41708 | ID=Msa1408010-mRNA-1:exon:25445;Parent=Msa1408010-mRNA-1 |
| tig0023342 | exon | 42761 | 43214 | 42761 | ID=Msa1408010-mRNA-1:exon:25446;Parent=Msa1408010-mRNA-1 |
| tig0023342 | CDS | 38424 | 39245 | 38424 | ID=Msa1408010-mRNA-1:cds;Parent=Msa1408010-mRNA-1 |
| tig0023342 | CDS | 40803 | 40999 | 40803 | ID=Msa1408010-mRNA-1:cds;Parent=Msa1408010-mRNA-1 |
| tig0023342 | CDS | 41708 | 41848 | 41708 | ID=Msa1408010-mRNA-1:cds;Parent=Msa1408010-mRNA-1 |
| tig0023342 | CDS | 42761 | 42878 | 42761 | ID=Msa1408010-mRNA-1:cds;Parent=Msa1408010-mRNA-1 |
| tig0023342 | three_prime_UTR | 42879 | 43214 | 42879 | ID=Msa1408010-mRNA-1:three_prime_utr;Parent=Msa1408010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
