Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058130 | XP_003589468.1 | 93.824 | 340 | 11 | 1 | 1 | 330 | 1 | 340 | 0.0 | 576 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058130 | sp|Q8LE10|HA22I_ARATH | 52.439 | 328 | 118 | 7 | 1 | 326 | 1 | 292 | 9.42e-97 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058130 | G7I756 | 93.824 | 340 | 11 | 1 | 1 | 330 | 1 | 340 | 0.0 | 576 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0058130 | 0.809564 | 1.778008e-50 | -8.615850e-47 |
| Msa0050530 | Msa0058130 | 0.802505 | 5.435219e-49 | -8.615850e-47 |
| Msa0058130 | Msa0063190 | 0.814714 | 1.338145e-51 | -8.615850e-47 |
| Msa0058130 | Msa0091350 | 0.801217 | 9.994473e-49 | -8.615850e-47 |
| Msa0058130 | Msa0100890 | 0.802517 | 5.404818e-49 | -8.615850e-47 |
| Msa0058130 | Msa0108630 | 0.801746 | 7.783750e-49 | -8.615850e-47 |
| Msa0058130 | Msa0109730 | 0.810974 | 8.827399e-51 | -8.615850e-47 |
| Msa0058130 | Msa0125590 | 0.800022 | 1.751203e-48 | -8.615850e-47 |
| Msa0058130 | Msa0127340 | 0.802122 | 6.515108e-49 | -8.615850e-47 |
| Msa0058130 | Msa0128570 | 0.804548 | 2.048835e-49 | -8.615850e-47 |
| Msa0058130 | Msa0147080 | 0.834894 | 2.301688e-56 | -8.615850e-47 |
| Msa0058130 | Msa0156050 | 0.805470 | 1.314687e-49 | -8.615850e-47 |
| Msa0058130 | Msa0156090 | 0.812389 | 4.345241e-51 | -8.615850e-47 |
| Msa0058130 | Msa0186180 | 0.823143 | 1.623191e-53 | -8.615850e-47 |
| Msa0058130 | Msa0204970 | 0.824995 | 5.967469e-54 | -8.615850e-47 |
| Msa0058130 | Msa0241040 | 0.824315 | 8.629459e-54 | -8.615850e-47 |
| Msa0058130 | Msa0249870 | 0.820551 | 6.462868e-53 | -8.615850e-47 |
| Msa0058130 | Msa0260570 | 0.806152 | 9.449679e-50 | -8.615850e-47 |
| Msa0058130 | Msa0260630 | 0.805468 | 1.315648e-49 | -8.615850e-47 |
| Msa0058130 | Msa0276730 | 0.814233 | 1.710349e-51 | -8.615850e-47 |
| Msa0058130 | Msa0278840 | 0.829729 | 4.373645e-55 | -8.615850e-47 |
| Msa0058130 | Msa0281540 | 0.806428 | 8.264857e-50 | -8.615850e-47 |
| Msa0058130 | Msa0320580 | 0.803168 | 3.964522e-49 | -8.615850e-47 |
| Msa0058130 | Msa0344110 | 0.809413 | 1.915823e-50 | -8.615850e-47 |
| Msa0058130 | Msa0349550 | 0.813933 | 1.991723e-51 | -8.615850e-47 |
| Msa0058130 | Msa0373170 | 0.809657 | 1.697941e-50 | -8.615850e-47 |
| Msa0058130 | Msa0383940 | 0.813223 | 2.854287e-51 | -8.615850e-47 |
| Msa0058130 | Msa0421750 | 0.804951 | 1.687848e-49 | -8.615850e-47 |
| Msa0058130 | Msa0433630 | 0.817061 | 4.009734e-52 | -8.615850e-47 |
| Msa0058130 | Msa0434360 | 0.802248 | 6.140097e-49 | -8.615850e-47 |
| Msa0058130 | Msa0466520 | 0.822155 | 2.754947e-53 | -8.615850e-47 |
| Msa0058130 | Msa0467690 | 0.808050 | 3.746804e-50 | -8.615850e-47 |
| Msa0058130 | Msa0478140 | 0.801547 | 8.552564e-49 | -8.615850e-47 |
| Msa0058130 | Msa0514020 | 0.809322 | 2.003668e-50 | -8.615850e-47 |
| Msa0058130 | Msa0527850 | 0.845177 | 4.777974e-59 | -8.615850e-47 |
| Msa0058130 | Msa0554300 | 0.816179 | 6.318138e-52 | -8.615850e-47 |
| Msa0058130 | Msa0557850 | 0.802259 | 6.107199e-49 | -8.615850e-47 |
| Msa0058130 | Msa0561560 | 0.804720 | 1.886119e-49 | -8.615850e-47 |
| Msa0058130 | Msa0572830 | 0.811892 | 5.576280e-51 | -8.615850e-47 |
| Msa0058130 | Msa0576330 | 0.825340 | 4.944144e-54 | -8.615850e-47 |
| Msa0058130 | Msa0582460 | 0.829482 | 5.021566e-55 | -8.615850e-47 |
| Msa0058130 | Msa0586200 | 0.822558 | 2.221657e-53 | -8.615850e-47 |
| Msa0058130 | Msa0612520 | 0.808851 | 2.527750e-50 | -8.615850e-47 |
| Msa0058130 | Msa0618840 | 0.801930 | 7.135790e-49 | -8.615850e-47 |
| Msa0058130 | Msa0620500 | 0.811993 | 5.302385e-51 | -8.615850e-47 |
| Msa0058130 | Msa0647440 | 0.816571 | 5.162837e-52 | -8.615850e-47 |
| Msa0058130 | Msa0648760 | 0.811420 | 7.063075e-51 | -8.615850e-47 |
| Msa0058130 | Msa0653160 | 0.823990 | 1.028710e-53 | -8.615850e-47 |
| Msa0058130 | Msa0654740 | 0.800747 | 1.246453e-48 | -8.615850e-47 |
| Msa0058130 | Msa0663290 | 0.836752 | 7.781848e-57 | -8.615850e-47 |
| Msa0058130 | Msa0664070 | 0.835682 | 1.455346e-56 | -8.615850e-47 |
| Msa0058130 | Msa0684750 | 0.834191 | 3.456726e-56 | -8.615850e-47 |
| Msa0058130 | Msa0707260 | 0.800006 | 1.764736e-48 | -8.615850e-47 |
| Msa0058130 | Msa0708980 | 0.817117 | 3.894663e-52 | -8.615850e-47 |
| Msa0058130 | Msa0837680 | 0.806202 | 9.224146e-50 | -8.615850e-47 |
| Msa0058130 | Msa0841500 | 0.813205 | 2.879132e-51 | -8.615850e-47 |
| Msa0058130 | Msa0856610 | 0.816609 | 5.063195e-52 | -8.615850e-47 |
| Msa0058130 | Msa0900090 | 0.809283 | 2.042524e-50 | -8.615850e-47 |
| Msa0058130 | Msa0929900 | 0.801395 | 9.186749e-49 | -8.615850e-47 |
| Msa0058130 | Msa1021560 | 0.807966 | 3.904258e-50 | -8.615850e-47 |
| Msa0058130 | Msa1071410 | 0.801321 | 9.514528e-49 | -8.615850e-47 |
| Msa0058130 | Msa1078860 | 0.803202 | 3.900972e-49 | -8.615850e-47 |
| Msa0058130 | Msa1085680 | 0.823484 | 1.351434e-53 | -8.615850e-47 |
| Msa0058130 | Msa1105540 | 0.805655 | 1.202081e-49 | -8.615850e-47 |
| Msa0058130 | Msa1144990 | 0.827708 | 1.347356e-54 | -8.615850e-47 |
| Msa0058130 | Msa1148930 | 0.810783 | 9.709616e-51 | -8.615850e-47 |
| Msa0058130 | Msa1163180 | 0.808545 | 2.938460e-50 | -8.615850e-47 |
| Msa0058130 | Msa1188340 | 0.810513 | 1.110667e-50 | -8.615850e-47 |
| Msa0058130 | Msa1191000 | 0.809515 | 1.821593e-50 | -8.615850e-47 |
| Msa0058130 | Msa1206040 | 0.805816 | 1.112183e-49 | -8.615850e-47 |
| Msa0058130 | Msa1215980 | 0.812796 | 3.539271e-51 | -8.615850e-47 |
| Msa0058130 | Msa1240940 | 0.817992 | 2.473560e-52 | -8.615850e-47 |
| Msa0058130 | Msa1282300 | 0.803692 | 3.087173e-49 | -8.615850e-47 |
| Msa0058130 | Msa1294790 | 0.809331 | 1.995217e-50 | -8.615850e-47 |
| Msa0058130 | Msa1297070 | 0.803002 | 4.291101e-49 | -8.615850e-47 |
| Msa0058130 | Msa1331650 | 0.802017 | 6.848306e-49 | -8.615850e-47 |
| Msa0058130 | Msa1406720 | 0.821568 | 3.767465e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058130 | MtrunA17_Chr1g0156501 | 93.824 | 340 | 11 | 1 | 1 | 330 | 1 | 340 | 0.0 | 576 |
| Msa0058130 | MtrunA17_Chr3g0142571 | 59.517 | 331 | 86 | 6 | 1 | 330 | 1 | 284 | 6.54e-120 | 347 |
| Msa0058130 | MtrunA17_Chr1g0177871 | 44.211 | 190 | 87 | 2 | 1 | 190 | 1 | 171 | 4.24e-57 | 186 |
| Msa0058130 | MtrunA17_Chr7g0267131 | 50.345 | 145 | 72 | 0 | 1 | 145 | 1 | 145 | 1.29e-54 | 177 |
| Msa0058130 | MtrunA17_Chr5g0403731 | 32.632 | 95 | 62 | 1 | 15 | 109 | 37 | 129 | 1.82e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058130 | AT5G42560.1 | 52.439 | 328 | 118 | 7 | 1 | 326 | 1 | 292 | 9.57e-98 | 291 |
| Msa0058130 | AT5G42560.3 | 51.582 | 316 | 115 | 7 | 13 | 326 | 2 | 281 | 2.62e-91 | 274 |
| Msa0058130 | AT5G42560.2 | 51.582 | 316 | 115 | 7 | 13 | 326 | 2 | 281 | 2.62e-91 | 274 |
| Msa0058130 | AT1G19950.1 | 47.353 | 340 | 139 | 6 | 1 | 328 | 1 | 312 | 5.49e-91 | 275 |
| Msa0058130 | AT1G75700.1 | 64.103 | 156 | 56 | 0 | 1 | 156 | 1 | 156 | 1.47e-78 | 238 |
| Msa0058130 | AT1G75700.2 | 64.103 | 156 | 56 | 0 | 1 | 156 | 1 | 156 | 1.47e-78 | 238 |
| Msa0058130 | AT1G75700.3 | 54.054 | 185 | 56 | 1 | 1 | 156 | 1 | 185 | 7.70e-72 | 222 |
| Msa0058130 | AT2G36020.1 | 50.955 | 157 | 77 | 0 | 1 | 157 | 1 | 157 | 4.68e-59 | 191 |
| Msa0058130 | AT4G36720.1 | 29.032 | 93 | 64 | 2 | 15 | 107 | 45 | 135 | 1.49e-11 | 63.2 |
Find 120 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAAGCTCCGATCAATTTC+TGG | 0.157517 | 1_2:-14396935 | None:intergenic |
| GGAAGTAAAAGAGGAGTTAT+TGG | 0.203411 | 1_2:+14397957 | Msa0058130:CDS |
| TCCTCTTCAGCAACTGAAAA+TGG | 0.204563 | 1_2:+14398240 | Msa0058130:CDS |
| CAGATGAAGGATTAGACTTC+TGG | 0.208821 | 1_2:-14398149 | None:intergenic |
| AATCGAAGCTGTTCAATTTC+CGG | 0.211353 | 1_2:-14396443 | None:intergenic |
| CCGAATACTTTCTTCCATTC+TGG | 0.228086 | 1_2:-14398286 | None:intergenic |
| ATAATTATATACCTTTGTTT+TGG | 0.244409 | 1_2:-14396782 | None:intergenic |
| AAATTGAACAGCTTCGATTT+TGG | 0.251242 | 1_2:+14396447 | Msa0058130:CDS |
| GTCGATGTTTAGCCGGAAAT+AGG | 0.254113 | 1_2:+14398366 | Msa0058130:three_prime_UTR |
| AAAGTAGCCCCTCCTGTTGC+AGG | 0.293457 | 1_2:+14397997 | Msa0058130:CDS |
| TTTACGAGATGCGGTGAATC+TGG | 0.297773 | 1_2:-14395437 | None:intergenic |
| TTTATAATTAAGCCGTAATT+TGG | 0.300625 | 1_2:+14395188 | Msa0058130:five_prime_UTR |
| TGGTCCAACTACCCTATTTC+CGG | 0.300661 | 1_2:-14398378 | None:intergenic |
| CGTTACACAACGCTTTAAAA+TGG | 0.310867 | 1_2:-14398398 | None:intergenic |
| GCTGTTGATTCAATATTCTT+TGG | 0.315816 | 1_2:-14398210 | None:intergenic |
| GCGGCTGGTTGGCCCTTGGC+AGG | 0.329188 | 1_2:-14397865 | None:intergenic |
| ACAATATTGCATACCAATAC+TGG | 0.331896 | 1_2:-14396472 | None:intergenic |
| CCAGAATGGAAGAAAGTATT+CGG | 0.341573 | 1_2:+14398286 | Msa0058130:CDS |
| GGTTGGCCCTTGGCAGGTGC+AGG | 0.343393 | 1_2:-14397859 | None:intergenic |
| ATTACGGCTTAATTATAAAC+TGG | 0.351708 | 1_2:-14395184 | None:intergenic |
| AAGCAGCTACAGGAGGCTTC+TGG | 0.363846 | 1_2:-14398059 | None:intergenic |
| ATGATAATTGTTTCAGATGA+AGG | 0.367093 | 1_2:-14398162 | None:intergenic |
| CTACTAGTGACCGAGCGATT+AGG | 0.367306 | 1_2:-14395215 | None:intergenic |
| ATTGAAAAGCAACAATTTAA+CGG | 0.368642 | 1_2:+14395289 | Msa0058130:five_prime_UTR |
| TACTAGTGACCGAGCGATTA+GGG | 0.375400 | 1_2:-14395214 | None:intergenic |
| TTTCAGGGATACAGAATGAT+AGG | 0.376443 | 1_2:+14396133 | Msa0058130:intron |
| TCTGGCGGTGGCGGTGGCGG+TGG | 0.382780 | 1_2:-14395419 | None:intergenic |
| AAAGCGTTGTGTAACGGTTT+CGG | 0.383090 | 1_2:+14398405 | Msa0058130:three_prime_UTR |
| GCAACAGGAGGGGCTACTTT+AGG | 0.385854 | 1_2:-14397994 | None:intergenic |
| AACCAGCTATAGGAGGCTTC+TGG | 0.393471 | 1_2:-14398089 | None:intergenic |
| TCGATGTTTAGCCGGAAATA+GGG | 0.403077 | 1_2:+14398367 | Msa0058130:three_prime_UTR |
| GAATCTGGCGGTGGCGGTGG+CGG | 0.404013 | 1_2:-14395422 | None:intergenic |
| CTACTGGGTTCCTACTGATC+TGG | 0.407544 | 1_2:-14398334 | None:intergenic |
| GGTGGCGGTGGCGGTGGTTG+AGG | 0.408395 | 1_2:-14395413 | None:intergenic |
| TGAGTAGTTAAACCAGCTAT+AGG | 0.410981 | 1_2:-14398099 | None:intergenic |
| CGATTAGGGTGACCAAATTA+CGG | 0.421750 | 1_2:-14395200 | None:intergenic |
| ATTGCAGCAACGACCGGGAC+CGG | 0.424962 | 1_2:+14397819 | Msa0058130:intron |
| ATGACAGTGTGTGAGAGATT+TGG | 0.431821 | 1_2:+14396600 | Msa0058130:CDS |
| TGCGGTGAATCTGGCGGTGG+CGG | 0.438294 | 1_2:-14395428 | None:intergenic |
| GGTGAATCTGGCGGTGGCGG+TGG | 0.438950 | 1_2:-14395425 | None:intergenic |
| TGCAACATATGGTTTAAAGA+AGG | 0.441591 | 1_2:-14396903 | None:intergenic |
| AATGTATTGTGAAGCTAAGT+TGG | 0.443796 | 1_2:+14396735 | Msa0058130:CDS |
| TGTTTGTTTAAACCTGCAAC+AGG | 0.458598 | 1_2:-14398009 | None:intergenic |
| TGGTTATTTAAAGCAGCTAC+AGG | 0.459504 | 1_2:-14398069 | None:intergenic |
| AGCAGCGGCTGGTTGGCCCT+TGG | 0.466244 | 1_2:-14397869 | None:intergenic |
| AGATGAAGGATTAGACTTCT+GGG | 0.473622 | 1_2:-14398148 | None:intergenic |
| TGTGGTTCTGTAGCAGCGGC+TGG | 0.474161 | 1_2:-14397880 | None:intergenic |
| AGAGGAAAAGTAACAGAAGA+AGG | 0.475526 | 1_2:-14395325 | None:intergenic |
| TGATAGGATCCTTTCTTACC+TGG | 0.479771 | 1_2:+14396149 | Msa0058130:CDS |
| TCTCAAAGAGCTGTTAGTTA+CGG | 0.482414 | 1_2:+14396998 | Msa0058130:CDS |
| CACAAGCGCCCAGGTAAGAA+AGG | 0.483813 | 1_2:-14396158 | None:intergenic |
| GTTCCAAAAGGAAGTAAAAG+AGG | 0.484315 | 1_2:+14397948 | Msa0058130:CDS |
| CAGAATGGAAGAAAGTATTC+GGG | 0.484520 | 1_2:+14398287 | Msa0058130:CDS |
| AACCAGAAGCCTCCTATAGC+TGG | 0.489915 | 1_2:+14398087 | Msa0058130:CDS |
| ACTTAGCTTCACAATACATT+GGG | 0.490800 | 1_2:-14396732 | None:intergenic |
| TTAGCCGGAAATAGGGTAGT+TGG | 0.493270 | 1_2:+14398374 | Msa0058130:three_prime_UTR |
| CTTGAAATTGCAGCAACGAC+CGG | 0.494610 | 1_2:+14397813 | Msa0058130:intron |
| CTTGAAGTTGTGCTAGAGGC+AGG | 0.497182 | 1_2:-14397922 | None:intergenic |
| GTTCTGTAGCAGCGGCTGGT+TGG | 0.499552 | 1_2:-14397876 | None:intergenic |
| ATCGGAGCTTGTCGGAACTA+AGG | 0.500483 | 1_2:+14396945 | Msa0058130:CDS |
| CAAAATTGTCGATGTTTAGC+CGG | 0.503945 | 1_2:+14398359 | Msa0058130:three_prime_UTR |
| GTTGTGCTAGAGGCAGGAGA+TGG | 0.506091 | 1_2:-14397916 | None:intergenic |
| CATCGGCTCCTCTGTATAGC+AGG | 0.511672 | 1_2:+14398543 | Msa0058130:three_prime_UTR |
| GTGAAGGATTGCGTTGTTGT+CGG | 0.511963 | 1_2:-14395359 | None:intergenic |
| ACCTGAGCGGACTGAGGTGC+TGG | 0.512203 | 1_2:-14397070 | None:intergenic |
| TCGTAAACCTGCACCTGCCA+AGG | 0.519991 | 1_2:+14397852 | Msa0058130:CDS |
| TTGTGCTAGAGGCAGGAGAT+GGG | 0.523724 | 1_2:-14397915 | None:intergenic |
| AACTTAGCTTCACAATACAT+TGG | 0.528637 | 1_2:-14396733 | None:intergenic |
| AACTTCAAGTCAGTTCCAAA+AGG | 0.529032 | 1_2:+14397936 | Msa0058130:CDS |
| GGGGCTACTTTAGGAGCTTG+TGG | 0.533157 | 1_2:-14397985 | None:intergenic |
| ACCAGCACCTCAGTCCGCTC+AGG | 0.534486 | 1_2:+14397069 | Msa0058130:CDS |
| TGTAAAGGAGGAGACCAGAA+TGG | 0.537004 | 1_2:+14398272 | Msa0058130:CDS |
| AAGAAAGTATTCGGGTTACA+CGG | 0.537361 | 1_2:+14398295 | Msa0058130:CDS |
| TTGAAATTGCAGCAACGACC+GGG | 0.537573 | 1_2:+14397814 | Msa0058130:intron |
| TAAATCGTATTAAATTTGAT+CGG | 0.541174 | 1_2:-14395158 | None:intergenic |
| ATAGCATTCATACGCTGGAT+AGG | 0.541233 | 1_2:-14396399 | None:intergenic |
| TTGCAGCAACGACCGGGACC+GGG | 0.545537 | 1_2:+14397820 | Msa0058130:intron |
| GATGGGATGGATATTTGCAT+CGG | 0.545657 | 1_2:+14398526 | Msa0058130:three_prime_UTR |
| AGGAAGATCGGCGACGGCGA+AGG | 0.548045 | 1_2:-14395393 | None:intergenic |
| AGAAAGTATTCGGGTTACAC+GGG | 0.556108 | 1_2:+14398296 | Msa0058130:CDS |
| CGGTCACTAGTAGAGTTGCT+TGG | 0.556674 | 1_2:+14395225 | Msa0058130:five_prime_UTR |
| TGGAAAATCTCTTGTAAAGG+AGG | 0.556796 | 1_2:+14398260 | Msa0058130:CDS |
| AAATGGAAAATCTCTTGTAA+AGG | 0.557309 | 1_2:+14398257 | Msa0058130:CDS |
| TGGCGGTGGTTGAGGAAGAT+CGG | 0.567526 | 1_2:-14395405 | None:intergenic |
| ACTTTATAGCATTCATACGC+TGG | 0.570495 | 1_2:-14396404 | None:intergenic |
| AGTAGTTGAAAAGAATAAGC+CGG | 0.571678 | 1_2:+14396424 | Msa0058130:CDS |
| TGTTTAAACCTGCAACAGGA+GGG | 0.572742 | 1_2:-14398005 | None:intergenic |
| CGAACTCTCACACCCGGTCC+CGG | 0.573418 | 1_2:-14397832 | None:intergenic |
| GTTTAAACCTGCAACAGGAG+GGG | 0.575918 | 1_2:-14398004 | None:intergenic |
| CGTAAACCTGCACCTGCCAA+GGG | 0.577276 | 1_2:+14397853 | Msa0058130:CDS |
| AACATGAGCCAGAAATTGAT+CGG | 0.579657 | 1_2:+14396927 | Msa0058130:CDS |
| TCGGAACTAAGGACAAGGGC+GGG | 0.580754 | 1_2:+14396956 | Msa0058130:CDS |
| GAAGGAAAATGCGACGGTGA+AGG | 0.581687 | 1_2:-14395375 | None:intergenic |
| TTGTTTAAACCTGCAACAGG+AGG | 0.583194 | 1_2:-14398006 | None:intergenic |
| AGATGCGGTGAATCTGGCGG+TGG | 0.583467 | 1_2:-14395431 | None:intergenic |
| TTGTCGGTGAGAGATGAAAG+AGG | 0.584021 | 1_2:-14395343 | None:intergenic |
| GTTATTTAAAGCAGCTACAG+AGG | 0.587763 | 1_2:-14398037 | None:intergenic |
| AATATGAATTTGTCTAGGCA+CGG | 0.588086 | 1_2:+14398460 | Msa0058130:three_prime_UTR |
| GATAGGATCCTTTCTTACCT+GGG | 0.588549 | 1_2:+14396150 | Msa0058130:CDS |
| GTGCTAGAGGCAGGAGATGG+GGG | 0.593522 | 1_2:-14397913 | None:intergenic |
| AACTTGTGGTTCTGTAGCAG+CGG | 0.597787 | 1_2:-14397884 | None:intergenic |
| GTAGTTAAACCAGCTATAGG+AGG | 0.599048 | 1_2:-14398096 | None:intergenic |
| TGTGCTAGAGGCAGGAGATG+GGG | 0.599849 | 1_2:-14397914 | None:intergenic |
| TTATTTAAAGCAGCTACAGG+AGG | 0.610125 | 1_2:-14398066 | None:intergenic |
| ATTTGGTCACCCTAATCGCT+CGG | 0.615390 | 1_2:+14395205 | Msa0058130:five_prime_UTR |
| CTGACTTGAAGTTGTGCTAG+AGG | 0.618717 | 1_2:-14397926 | None:intergenic |
| ACGAGATGCGGTGAATCTGG+CGG | 0.621134 | 1_2:-14395434 | None:intergenic |
| TTTGTGGTACCCCAAAACAA+AGG | 0.623782 | 1_2:+14396771 | Msa0058130:CDS |
| TGAAACTTACACAAGCGCCC+AGG | 0.634837 | 1_2:-14396167 | None:intergenic |
| GCTTGTCGGAACTAAGGACA+AGG | 0.640010 | 1_2:+14396951 | Msa0058130:CDS |
| AGAAATTGATCGGAGCTTGT+CGG | 0.643569 | 1_2:+14396937 | Msa0058130:CDS |
| TGAACTACCTGAGCGGACTG+AGG | 0.646512 | 1_2:-14397076 | None:intergenic |
| GTCGGAACTAAGGACAAGGG+CGG | 0.652471 | 1_2:+14396955 | Msa0058130:CDS |
| GGTTTACGAACTCTCACACC+CGG | 0.663395 | 1_2:-14397838 | None:intergenic |
| TGGTTGAGGAAGATCGGCGA+CGG | 0.664626 | 1_2:-14395399 | None:intergenic |
| GACGGCGAAGGAAAATGCGA+CGG | 0.670353 | 1_2:-14395381 | None:intergenic |
| GAAAGTATTCGGGTTACACG+GGG | 0.677731 | 1_2:+14398297 | Msa0058130:CDS |
| CGTGAAGACCTGCTATACAG+AGG | 0.705367 | 1_2:-14398551 | None:intergenic |
| ATCATAATGAACTACCTGAG+CGG | 0.709859 | 1_2:-14397083 | None:intergenic |
| CTTGTCGGAACTAAGGACAA+GGG | 0.728246 | 1_2:+14396952 | Msa0058130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTTATTTTTTGAG+AGG | + | chr1_2:14395822-14395841 | Msa0058130:intron | 10.0% |
| !! | TAAATCGTATTAAATTTGAT+CGG | - | chr1_2:14395161-14395180 | None:intergenic | 15.0% |
| !!! | TATTCATTTAGAATATAGTT+CGG | + | chr1_2:14395626-14395645 | Msa0058130:intron | 15.0% |
| !!! | TATCTTTGATTTTTAATTTC+AGG | + | chr1_2:14396117-14396136 | Msa0058130:intron | 15.0% |
| !!! | ATCTTTGATTTTTAATTTCA+GGG | + | chr1_2:14396118-14396137 | Msa0058130:intron | 15.0% |
| !!! | TAATTATATACCTTTGTTTT+GGG | - | chr1_2:14396784-14396803 | None:intergenic | 15.0% |
| !!! | ATAATTATATACCTTTGTTT+TGG | - | chr1_2:14396785-14396804 | None:intergenic | 15.0% |
| !! | TTTATAATTAAGCCGTAATT+TGG | + | chr1_2:14395188-14395207 | Msa0058130:five_prime_UTR | 20.0% |
| !! | ATTGAAAAGCAACAATTTAA+CGG | + | chr1_2:14395289-14395308 | Msa0058130:five_prime_UTR | 20.0% |
| !! | TAGAAAAAAAAACAATCATC+AGG | - | chr1_2:14395683-14395702 | None:intergenic | 20.0% |
| !!! | TAATGATTTTATTTGTCCTT+TGG | + | chr1_2:14396348-14396367 | Msa0058130:intron | 20.0% |
| !!! | AATTATATACCTTTGTTTTG+GGG | - | chr1_2:14396783-14396802 | None:intergenic | 20.0% |
| !!! | AGGTATATAATTATTTTCTG+TGG | + | chr1_2:14396791-14396810 | Msa0058130:intron | 20.0% |
| !! | GATATGTTAAGAGAATAAAA+TGG | - | chr1_2:14397751-14397770 | None:intergenic | 20.0% |
| !!! | CTTTTAATATGAATTTGTCT+AGG | + | chr1_2:14398455-14398474 | Msa0058130:three_prime_UTR | 20.0% |
| !! | AATATGATTCCATAAAAAAG+TGG | - | chr1_2:14398504-14398523 | None:intergenic | 20.0% |
| !!! | TTTATGGAATCATATTTTGA+TGG | + | chr1_2:14398508-14398527 | Msa0058130:three_prime_UTR | 20.0% |
| !!! | TTATGGAATCATATTTTGAT+GGG | + | chr1_2:14398509-14398528 | Msa0058130:three_prime_UTR | 20.0% |
| ! | ATTACGGCTTAATTATAAAC+TGG | - | chr1_2:14395187-14395206 | None:intergenic | 25.0% |
| ! | TCTAAATGAATAAATCCAGA+AGG | - | chr1_2:14395618-14395637 | None:intergenic | 25.0% |
| ! | TCAATTTCAAATTCTACTTG+TGG | - | chr1_2:14395746-14395765 | None:intergenic | 25.0% |
| ! | TTAGATATGATACTATCCAA+TGG | - | chr1_2:14395972-14395991 | None:intergenic | 25.0% |
| !!! | CCATATCGATTCAAAAAAAT+TGG | - | chr1_2:14396199-14396218 | None:intergenic | 25.0% |
| !!! | CCAATTTTTTTGAATCGATA+TGG | + | chr1_2:14396196-14396215 | Msa0058130:intron | 25.0% |
| ! | CAACATGGAAAAATAAAAAC+AGG | - | chr1_2:14396561-14396580 | None:intergenic | 25.0% |
| !!! | TTTTTATTTTTCCATGTTGC+AGG | + | chr1_2:14396562-14396581 | Msa0058130:intron | 25.0% |
| ! | TTGAATTGAATTCTTCTTGA+AGG | + | chr1_2:14396707-14396726 | Msa0058130:intron | 25.0% |
| ! | TGAATTGAATTCTTCTTGAA+GGG | + | chr1_2:14396708-14396727 | Msa0058130:intron | 25.0% |
| !!! | TGGCATTTTTCATATTTTTG+TGG | + | chr1_2:14396755-14396774 | Msa0058130:CDS | 25.0% |
| ! | TTTGCATTTCTTCAATATGA+TGG | + | chr1_2:14396837-14396856 | Msa0058130:intron | 25.0% |
| ! | TAAAGTTTACCTTTGTGTTA+GGG | + | chr1_2:14396860-14396879 | Msa0058130:intron | 25.0% |
| ! | AGTTCATTATGATTATGCAT+TGG | + | chr1_2:14397093-14397112 | Msa0058130:intron | 25.0% |
| !! | ATTTGAGTTTGACTTAACTT+TGG | + | chr1_2:14397132-14397151 | Msa0058130:intron | 25.0% |
| ! | ACTTTGGATATAAGTACTTA+TGG | + | chr1_2:14397148-14397167 | Msa0058130:intron | 25.0% |
| ! | ACCTGTTAAATCATTAATCT+AGG | + | chr1_2:14397217-14397236 | Msa0058130:intron | 25.0% |
| ! | CCTGTTAAATCATTAATCTA+GGG | + | chr1_2:14397218-14397237 | Msa0058130:intron | 25.0% |
| ! | TGATTAACGATACAAAAACA+TGG | - | chr1_2:14397433-14397452 | None:intergenic | 25.0% |
| ! | AACAATGAATACTTTCAAGA+TGG | - | chr1_2:14397564-14397583 | None:intergenic | 25.0% |
| !!! | ATCTTGAAAGTATTCATTGT+TGG | + | chr1_2:14397563-14397582 | Msa0058130:intron | 25.0% |
| ! | ATTACATAGCACTGTAATTA+TGG | + | chr1_2:14397671-14397690 | Msa0058130:intron | 25.0% |
| ! | TTGTTAGTTACAAGTTAAGT+AGG | - | chr1_2:14397717-14397736 | None:intergenic | 25.0% |
| ! | ATGATAATTGTTTCAGATGA+AGG | - | chr1_2:14398165-14398184 | None:intergenic | 25.0% |
| ! | AAATGGAAAATCTCTTGTAA+AGG | + | chr1_2:14398257-14398276 | Msa0058130:CDS | 25.0% |
| !! | TTGTTTTCAGAAACTTTAGT+TGG | + | chr1_2:14398599-14398618 | Msa0058130:three_prime_UTR | 25.0% |
| AATAAATCCAGAAGGAACTA+GGG | - | chr1_2:14395610-14395629 | None:intergenic | 30.0% | |
| TTATTCAGCATAATGCTCAT+CGG | - | chr1_2:14395656-14395675 | None:intergenic | 30.0% | |
| TAGTTTATGATGTAGTCCAT+TGG | + | chr1_2:14395953-14395972 | Msa0058130:intron | 30.0% | |
| ! | TATCTAAAACTTTAGTGAGC+AGG | + | chr1_2:14395985-14396004 | Msa0058130:intron | 30.0% |
| ! | ATCTAAAACTTTAGTGAGCA+GGG | + | chr1_2:14395986-14396005 | Msa0058130:intron | 30.0% |
| ! | ATGGTGATAATGATTAGCAT+TGG | + | chr1_2:14396215-14396234 | Msa0058130:intron | 30.0% |
| ! | TGGTGATAATGATTAGCATT+GGG | + | chr1_2:14396216-14396235 | Msa0058130:intron | 30.0% |
| TGGTTTAATGATTAGCATTG+TGG | + | chr1_2:14396314-14396333 | Msa0058130:intron | 30.0% | |
| ! | TTATTTGTCCTTTGGTGTAA+TGG | + | chr1_2:14396356-14396375 | Msa0058130:intron | 30.0% |
| AGTAGTTGAAAAGAATAAGC+CGG | + | chr1_2:14396424-14396443 | Msa0058130:CDS | 30.0% | |
| ! | AAATTGAACAGCTTCGATTT+TGG | + | chr1_2:14396447-14396466 | Msa0058130:CDS | 30.0% |
| ACAATATTGCATACCAATAC+TGG | - | chr1_2:14396475-14396494 | None:intergenic | 30.0% | |
| ! | TTGGAGATACTTTTGTATCA+TGG | + | chr1_2:14396619-14396638 | Msa0058130:CDS | 30.0% |
| ACTTAGCTTCACAATACATT+GGG | - | chr1_2:14396735-14396754 | None:intergenic | 30.0% | |
| AACTTAGCTTCACAATACAT+TGG | - | chr1_2:14396736-14396755 | None:intergenic | 30.0% | |
| AATGTATTGTGAAGCTAAGT+TGG | + | chr1_2:14396735-14396754 | Msa0058130:CDS | 30.0% | |
| GTAAAGTTTACCTTTGTGTT+AGG | + | chr1_2:14396859-14396878 | Msa0058130:intron | 30.0% | |
| TGCAACATATGGTTTAAAGA+AGG | - | chr1_2:14396906-14396925 | None:intergenic | 30.0% | |
| ! | GGTATGTATTAAGTTGTATG+TGG | - | chr1_2:14397200-14397219 | None:intergenic | 30.0% |
| CCCTAGATTAATGATTTAAC+AGG | - | chr1_2:14397221-14397240 | None:intergenic | 30.0% | |
| CTAGGAAACTAACTAATAAC+TGG | + | chr1_2:14397250-14397269 | Msa0058130:intron | 30.0% | |
| !! | GTCATTTTGCTTATCAGAAA+AGG | - | chr1_2:14397296-14397315 | None:intergenic | 30.0% |
| TGTCTAACAATACAAACACA+TGG | - | chr1_2:14397365-14397384 | None:intergenic | 30.0% | |
| ACTTTCAAGATGGAAAAGAA+AGG | - | chr1_2:14397554-14397573 | None:intergenic | 30.0% | |
| !! | TTGAAAGTATTCATTGTTGG+AGG | + | chr1_2:14397566-14397585 | Msa0058130:intron | 30.0% |
| TATTCATTGTTGGAGGAAAA+TGG | + | chr1_2:14397573-14397592 | Msa0058130:intron | 30.0% | |
| ATTCATTGTTGGAGGAAAAT+GGG | + | chr1_2:14397574-14397593 | Msa0058130:intron | 30.0% | |
| !! | GCTGTTGATTCAATATTCTT+TGG | - | chr1_2:14398213-14398232 | None:intergenic | 30.0% |
| !!! | CATTTTAAAGCGTTGTGTAA+CGG | + | chr1_2:14398399-14398418 | Msa0058130:three_prime_UTR | 30.0% |
| AATATGAATTTGTCTAGGCA+CGG | + | chr1_2:14398460-14398479 | Msa0058130:three_prime_UTR | 30.0% | |
| AGAGGAAAAGTAACAGAAGA+AGG | - | chr1_2:14395328-14395347 | None:intergenic | 35.0% | |
| GAATAAATCCAGAAGGAACT+AGG | - | chr1_2:14395611-14395630 | None:intergenic | 35.0% | |
| ! | GTTCTTTAGTTTCAGTTGCT+TGG | + | chr1_2:14396049-14396068 | Msa0058130:intron | 35.0% |
| TTAGTTTCAGTTGCTTGGAT+TGG | + | chr1_2:14396054-14396073 | Msa0058130:intron | 35.0% | |
| TGTTAATCCAAAGTCCAAAC+AGG | - | chr1_2:14396094-14396113 | None:intergenic | 35.0% | |
| TGTTTGGACTTTGGATTAAC+AGG | + | chr1_2:14396093-14396112 | Msa0058130:intron | 35.0% | |
| TTTCAGGGATACAGAATGAT+AGG | + | chr1_2:14396133-14396152 | Msa0058130:intron | 35.0% | |
| ! | GATAATGATTAGCATTGGGA+TGG | + | chr1_2:14396220-14396239 | Msa0058130:intron | 35.0% |
| ! | AAGTCTTATCCCACTAAGTA+GGG | - | chr1_2:14396279-14396298 | None:intergenic | 35.0% |
| ACTTTATAGCATTCATACGC+TGG | - | chr1_2:14396407-14396426 | None:intergenic | 35.0% | |
| AATCGAAGCTGTTCAATTTC+CGG | - | chr1_2:14396446-14396465 | None:intergenic | 35.0% | |
| ATACTTCACGTTTAGCATCA+AGG | - | chr1_2:14396503-14396522 | None:intergenic | 35.0% | |
| ! | TTTTCCATGTTGCAGGATTT+TGG | + | chr1_2:14396569-14396588 | Msa0058130:intron | 35.0% |
| TATGTTGTTCCCTAACACAA+AGG | - | chr1_2:14396872-14396891 | None:intergenic | 35.0% | |
| AACATGAGCCAGAAATTGAT+CGG | + | chr1_2:14396927-14396946 | Msa0058130:CDS | 35.0% | |
| TCTCAAAGAGCTGTTAGTTA+CGG | + | chr1_2:14396998-14397017 | Msa0058130:CDS | 35.0% | |
| ATCATAATGAACTACCTGAG+CGG | - | chr1_2:14397086-14397105 | None:intergenic | 35.0% | |
| CATATTGTAGTGTTCTTTGC+TGG | + | chr1_2:14397513-14397532 | Msa0058130:intron | 35.0% | |
| CAAGATGGAAAAGAAAGGAA+AGG | - | chr1_2:14397549-14397568 | None:intergenic | 35.0% | |
| AACTTCAAGTCAGTTCCAAA+AGG | + | chr1_2:14397936-14397955 | Msa0058130:CDS | 35.0% | |
| GTTCCAAAAGGAAGTAAAAG+AGG | + | chr1_2:14397948-14397967 | Msa0058130:CDS | 35.0% | |
| ! | ACTCCTCTTTTACTTCCTTT+TGG | - | chr1_2:14397954-14397973 | None:intergenic | 35.0% |
| GGAAGTAAAAGAGGAGTTAT+TGG | + | chr1_2:14397957-14397976 | Msa0058130:CDS | 35.0% | |
| TGTTTGTTTAAACCTGCAAC+AGG | - | chr1_2:14398012-14398031 | None:intergenic | 35.0% | |
| ! | GTTATTTAAAGCAGCTACAG+AGG | - | chr1_2:14398040-14398059 | None:intergenic | 35.0% |
| ! | TTATTTAAAGCAGCTACAGG+AGG | - | chr1_2:14398069-14398088 | None:intergenic | 35.0% |
| ! | TGGTTATTTAAAGCAGCTAC+AGG | - | chr1_2:14398042-14398061 | None:intergenic | 35.0% |
| TGAGTAGTTAAACCAGCTAT+AGG | - | chr1_2:14398102-14398121 | None:intergenic | 35.0% | |
| AGATGAAGGATTAGACTTCT+GGG | - | chr1_2:14398151-14398170 | None:intergenic | 35.0% | |
| TGGAAAATCTCTTGTAAAGG+AGG | + | chr1_2:14398260-14398279 | Msa0058130:CDS | 35.0% | |
| !! | CCAGAATGGAAGAAAGTATT+CGG | + | chr1_2:14398286-14398305 | Msa0058130:CDS | 35.0% |
| !! | CAGAATGGAAGAAAGTATTC+GGG | + | chr1_2:14398287-14398306 | Msa0058130:CDS | 35.0% |
| !! | AAGAAAGTATTCGGGTTACA+CGG | + | chr1_2:14398295-14398314 | Msa0058130:CDS | 35.0% |
| CTAAGAAAAACCAGATCAGT+AGG | + | chr1_2:14398324-14398343 | Msa0058130:CDS | 35.0% | |
| !! | ATCGACAATTTTGTGCTACT+GGG | - | chr1_2:14398352-14398371 | None:intergenic | 35.0% |
| CAAAATTGTCGATGTTTAGC+CGG | + | chr1_2:14398359-14398378 | Msa0058130:three_prime_UTR | 35.0% | |
| !! | CGTTACACAACGCTTTAAAA+TGG | - | chr1_2:14398401-14398420 | None:intergenic | 35.0% |
| !!! | AGCTTGATGCCACTTTTTTA+TGG | + | chr1_2:14398492-14398511 | Msa0058130:three_prime_UTR | 35.0% |
| !!! | GGAATCATATTTTGATGGGA+TGG | + | chr1_2:14398513-14398532 | Msa0058130:three_prime_UTR | 35.0% |
| CGATTAGGGTGACCAAATTA+CGG | - | chr1_2:14395203-14395222 | None:intergenic | 40.0% | |
| ! | GAGAAGAGTTTTACGAGATG+CGG | - | chr1_2:14395449-14395468 | None:intergenic | 40.0% |
| !! | GTAGCTTTTGAGTCTAAACG+TGG | + | chr1_2:14395782-14395801 | Msa0058130:intron | 40.0% |
| ATGCTGTGGTATATCCTGTT+TGG | + | chr1_2:14396077-14396096 | Msa0058130:intron | 40.0% | |
| GGTATATCCTGTTTGGACTT+TGG | + | chr1_2:14396084-14396103 | Msa0058130:intron | 40.0% | |
| TGATAGGATCCTTTCTTACC+TGG | + | chr1_2:14396149-14396168 | Msa0058130:CDS | 40.0% | |
| GATAGGATCCTTTCTTACCT+GGG | + | chr1_2:14396150-14396169 | Msa0058130:CDS | 40.0% | |
| ACTAAGTAGGGTCAGCTAAA+TGG | - | chr1_2:14396267-14396286 | None:intergenic | 40.0% | |
| ATTTAGCTGACCCTACTTAG+TGG | + | chr1_2:14396266-14396285 | Msa0058130:intron | 40.0% | |
| TTTAGCTGACCCTACTTAGT+GGG | + | chr1_2:14396267-14396286 | Msa0058130:intron | 40.0% | |
| ! | CAAGTCTTATCCCACTAAGT+AGG | - | chr1_2:14396280-14396299 | None:intergenic | 40.0% |
| CTACTTAGTGGGATAAGACT+TGG | + | chr1_2:14396278-14396297 | Msa0058130:intron | 40.0% | |
| !!! | TGTAATGGCAGGAGTGTTTT+TGG | + | chr1_2:14396371-14396390 | Msa0058130:intron | 40.0% |
| ATAGCATTCATACGCTGGAT+AGG | - | chr1_2:14396402-14396421 | None:intergenic | 40.0% | |
| !!! | TTCGATTTTGGTGCCAGTAT+TGG | + | chr1_2:14396459-14396478 | Msa0058130:CDS | 40.0% |
| ATGACAGTGTGTGAGAGATT+TGG | + | chr1_2:14396600-14396619 | Msa0058130:CDS | 40.0% | |
| TTTGTGGTACCCCAAAACAA+AGG | + | chr1_2:14396771-14396790 | Msa0058130:CDS | 40.0% | |
| ! | GGCTCATGTTTTGCAACATA+TGG | - | chr1_2:14396917-14396936 | None:intergenic | 40.0% |
| AGAAATTGATCGGAGCTTGT+CGG | + | chr1_2:14396937-14396956 | Msa0058130:CDS | 40.0% | |
| ! | AATCTAGGGCGATTTGAACT+AGG | + | chr1_2:14397232-14397251 | Msa0058130:intron | 40.0% |
| TTGGAGGAAAATGGGAGAAA+GGG | + | chr1_2:14397582-14397601 | Msa0058130:intron | 40.0% | |
| TTATGGCAACAACAACAACC+TGG | + | chr1_2:14397688-14397707 | Msa0058130:intron | 40.0% | |
| TACAAGTTAAGTAGGTTGCC+AGG | - | chr1_2:14397709-14397728 | None:intergenic | 40.0% | |
| TGTTTAAACCTGCAACAGGA+GGG | - | chr1_2:14398008-14398027 | None:intergenic | 40.0% | |
| TTGTTTAAACCTGCAACAGG+AGG | - | chr1_2:14398009-14398028 | None:intergenic | 40.0% | |
| GTAGTTAAACCAGCTATAGG+AGG | - | chr1_2:14398099-14398118 | None:intergenic | 40.0% | |
| CAGATGAAGGATTAGACTTC+TGG | - | chr1_2:14398152-14398171 | None:intergenic | 40.0% | |
| ! | ATTTTCAGTTGCTGAAGAGG+AGG | - | chr1_2:14398241-14398260 | None:intergenic | 40.0% |
| TCCTCTTCAGCAACTGAAAA+TGG | + | chr1_2:14398240-14398259 | Msa0058130:CDS | 40.0% | |
| ! | TCCATTTTCAGTTGCTGAAG+AGG | - | chr1_2:14398244-14398263 | None:intergenic | 40.0% |
| CCGAATACTTTCTTCCATTC+TGG | - | chr1_2:14398289-14398308 | None:intergenic | 40.0% | |
| !! | AGAAAGTATTCGGGTTACAC+GGG | + | chr1_2:14398296-14398315 | Msa0058130:CDS | 40.0% |
| ! | CATCGACAATTTTGTGCTAC+TGG | - | chr1_2:14398353-14398372 | None:intergenic | 40.0% |
| TCGATGTTTAGCCGGAAATA+GGG | + | chr1_2:14398367-14398386 | Msa0058130:three_prime_UTR | 40.0% | |
| !! | AAAGCGTTGTGTAACGGTTT+CGG | + | chr1_2:14398405-14398424 | Msa0058130:three_prime_UTR | 40.0% |
| GATGGGATGGATATTTGCAT+CGG | + | chr1_2:14398526-14398545 | Msa0058130:three_prime_UTR | 40.0% | |
| ATTTGGTCACCCTAATCGCT+CGG | + | chr1_2:14395205-14395224 | Msa0058130:five_prime_UTR | 45.0% | |
| TACTAGTGACCGAGCGATTA+GGG | - | chr1_2:14395217-14395236 | None:intergenic | 45.0% | |
| TTGTCGGTGAGAGATGAAAG+AGG | - | chr1_2:14395346-14395365 | None:intergenic | 45.0% | |
| GTGAAGGATTGCGTTGTTGT+CGG | - | chr1_2:14395362-14395381 | None:intergenic | 45.0% | |
| TTTACGAGATGCGGTGAATC+TGG | - | chr1_2:14395440-14395459 | None:intergenic | 45.0% | |
| ! | TTTTTCGCCCTAGTTCCTTC+TGG | + | chr1_2:14395600-14395619 | Msa0058130:intron | 45.0% |
| ! | GACTTGGTTGTTGTTGTGTC+TGG | + | chr1_2:14396294-14396313 | Msa0058130:intron | 45.0% |
| ! | TTGTCCTTTGGTGTAATGGC+AGG | + | chr1_2:14396360-14396379 | Msa0058130:intron | 45.0% |
| GCAACCAAAATCCTGCAACA+TGG | - | chr1_2:14396576-14396595 | None:intergenic | 45.0% | |
| GACAAGCTCCGATCAATTTC+TGG | - | chr1_2:14396938-14396957 | None:intergenic | 45.0% | |
| CTTGTCGGAACTAAGGACAA+GGG | + | chr1_2:14396952-14396971 | Msa0058130:CDS | 45.0% | |
| GTTGGAGGAAAATGGGAGAA+AGG | + | chr1_2:14397581-14397600 | Msa0058130:intron | 45.0% | |
| CTTGAAATTGCAGCAACGAC+CGG | + | chr1_2:14397813-14397832 | Msa0058130:intron | 45.0% | |
| TTGAAATTGCAGCAACGACC+GGG | + | chr1_2:14397814-14397833 | Msa0058130:intron | 45.0% | |
| ! | AACTTGTGGTTCTGTAGCAG+CGG | - | chr1_2:14397887-14397906 | None:intergenic | 45.0% |
| ! | CTGACTTGAAGTTGTGCTAG+AGG | - | chr1_2:14397929-14397948 | None:intergenic | 45.0% |
| GTTTAAACCTGCAACAGGAG+GGG | - | chr1_2:14398007-14398026 | None:intergenic | 45.0% | |
| TGTAAAGGAGGAGACCAGAA+TGG | + | chr1_2:14398272-14398291 | Msa0058130:CDS | 45.0% | |
| !! | GAAAGTATTCGGGTTACACG+GGG | + | chr1_2:14398297-14398316 | Msa0058130:CDS | 45.0% |
| GTCGATGTTTAGCCGGAAAT+AGG | + | chr1_2:14398366-14398385 | Msa0058130:three_prime_UTR | 45.0% | |
| TTAGCCGGAAATAGGGTAGT+TGG | + | chr1_2:14398374-14398393 | Msa0058130:three_prime_UTR | 45.0% | |
| TGGTCCAACTACCCTATTTC+CGG | - | chr1_2:14398381-14398400 | None:intergenic | 45.0% | |
| CTACTAGTGACCGAGCGATT+AGG | - | chr1_2:14395218-14395237 | None:intergenic | 50.0% | |
| CGGTCACTAGTAGAGTTGCT+TGG | + | chr1_2:14395225-14395244 | Msa0058130:five_prime_UTR | 50.0% | |
| GAAGGAAAATGCGACGGTGA+AGG | - | chr1_2:14395378-14395397 | None:intergenic | 50.0% | |
| ! | GTTGCTTGGATTGGATGCTG+TGG | + | chr1_2:14396063-14396082 | Msa0058130:intron | 50.0% |
| TGAAACTTACACAAGCGCCC+AGG | - | chr1_2:14396170-14396189 | None:intergenic | 50.0% | |
| CACTCCTGCCATTACACCAA+AGG | - | chr1_2:14396367-14396386 | None:intergenic | 50.0% | |
| ATCGGAGCTTGTCGGAACTA+AGG | + | chr1_2:14396945-14396964 | Msa0058130:CDS | 50.0% | |
| GCTTGTCGGAACTAAGGACA+AGG | + | chr1_2:14396951-14396970 | Msa0058130:CDS | 50.0% | |
| GGTTTACGAACTCTCACACC+CGG | - | chr1_2:14397841-14397860 | None:intergenic | 50.0% | |
| GATGGGGGTTCTTCAACTTG+TGG | - | chr1_2:14397901-14397920 | None:intergenic | 50.0% | |
| TTGTGCTAGAGGCAGGAGAT+GGG | - | chr1_2:14397918-14397937 | None:intergenic | 50.0% | |
| CTTGAAGTTGTGCTAGAGGC+AGG | - | chr1_2:14397925-14397944 | None:intergenic | 50.0% | |
| AACCAGAAGCCTCCTATAGC+TGG | + | chr1_2:14398087-14398106 | Msa0058130:CDS | 50.0% | |
| AACCAGCTATAGGAGGCTTC+TGG | - | chr1_2:14398092-14398111 | None:intergenic | 50.0% | |
| CTACTGGGTTCCTACTGATC+TGG | - | chr1_2:14398337-14398356 | None:intergenic | 50.0% | |
| CGTGAAGACCTGCTATACAG+AGG | - | chr1_2:14398554-14398573 | None:intergenic | 50.0% | |
| GACGGCGAAGGAAAATGCGA+CGG | - | chr1_2:14395384-14395403 | None:intergenic | 55.0% | |
| TGGTTGAGGAAGATCGGCGA+CGG | - | chr1_2:14395402-14395421 | None:intergenic | 55.0% | |
| TGGCGGTGGTTGAGGAAGAT+CGG | - | chr1_2:14395408-14395427 | None:intergenic | 55.0% | |
| ACGAGATGCGGTGAATCTGG+CGG | - | chr1_2:14395437-14395456 | None:intergenic | 55.0% | |
| CACAAGCGCCCAGGTAAGAA+AGG | - | chr1_2:14396161-14396180 | None:intergenic | 55.0% | |
| GTCGGAACTAAGGACAAGGG+CGG | + | chr1_2:14396955-14396974 | Msa0058130:CDS | 55.0% | |
| TCGGAACTAAGGACAAGGGC+GGG | + | chr1_2:14396956-14396975 | Msa0058130:CDS | 55.0% | |
| !! | TGAACTACCTGAGCGGACTG+AGG | - | chr1_2:14397079-14397098 | None:intergenic | 55.0% |
| TCGTAAACCTGCACCTGCCA+AGG | + | chr1_2:14397852-14397871 | Msa0058130:CDS | 55.0% | |
| CGTAAACCTGCACCTGCCAA+GGG | + | chr1_2:14397853-14397872 | Msa0058130:CDS | 55.0% | |
| TGTGCTAGAGGCAGGAGATG+GGG | - | chr1_2:14397917-14397936 | None:intergenic | 55.0% | |
| GTTGTGCTAGAGGCAGGAGA+TGG | - | chr1_2:14397919-14397938 | None:intergenic | 55.0% | |
| ! | GGGGCTACTTTAGGAGCTTG+TGG | - | chr1_2:14397988-14398007 | None:intergenic | 55.0% |
| ! | GCAACAGGAGGGGCTACTTT+AGG | - | chr1_2:14397997-14398016 | None:intergenic | 55.0% |
| AAAGTAGCCCCTCCTGTTGC+AGG | + | chr1_2:14397997-14398016 | Msa0058130:CDS | 55.0% | |
| AAGCAGCTACAGGAGGCTTC+TGG | - | chr1_2:14398062-14398081 | None:intergenic | 55.0% | |
| !! | CATCGGCTCCTCTGTATAGC+AGG | + | chr1_2:14398543-14398562 | Msa0058130:three_prime_UTR | 55.0% |
| AGATGCGGTGAATCTGGCGG+TGG | - | chr1_2:14395434-14395453 | None:intergenic | 60.0% | |
| ATTGCAGCAACGACCGGGAC+CGG | + | chr1_2:14397819-14397838 | Msa0058130:intron | 60.0% | |
| GTTCTGTAGCAGCGGCTGGT+TGG | - | chr1_2:14397879-14397898 | None:intergenic | 60.0% | |
| ! | TGTGGTTCTGTAGCAGCGGC+TGG | - | chr1_2:14397883-14397902 | None:intergenic | 60.0% |
| GTGCTAGAGGCAGGAGATGG+GGG | - | chr1_2:14397916-14397935 | None:intergenic | 60.0% | |
| AGGAAGATCGGCGACGGCGA+AGG | - | chr1_2:14395396-14395415 | None:intergenic | 65.0% | |
| TGCGGTGAATCTGGCGGTGG+CGG | - | chr1_2:14395431-14395450 | None:intergenic | 65.0% | |
| ACCAGCACCTCAGTCCGCTC+AGG | + | chr1_2:14397069-14397088 | Msa0058130:CDS | 65.0% | |
| !! | ACCTGAGCGGACTGAGGTGC+TGG | - | chr1_2:14397073-14397092 | None:intergenic | 65.0% |
| TTGCAGCAACGACCGGGACC+GGG | + | chr1_2:14397820-14397839 | Msa0058130:intron | 65.0% | |
| CGAACTCTCACACCCGGTCC+CGG | - | chr1_2:14397835-14397854 | None:intergenic | 65.0% | |
| ! | GAATCTGGCGGTGGCGGTGG+CGG | - | chr1_2:14395425-14395444 | None:intergenic | 70.0% |
| ! | GGTGAATCTGGCGGTGGCGG+TGG | - | chr1_2:14395428-14395447 | None:intergenic | 70.0% |
| ! | GGTTGGCCCTTGGCAGGTGC+AGG | - | chr1_2:14397862-14397881 | None:intergenic | 70.0% |
| ! | AGCAGCGGCTGGTTGGCCCT+TGG | - | chr1_2:14397872-14397891 | None:intergenic | 70.0% |
| ! | GGTGGCGGTGGCGGTGGTTG+AGG | - | chr1_2:14395416-14395435 | None:intergenic | 75.0% |
| ! | GCGGCTGGTTGGCCCTTGGC+AGG | - | chr1_2:14397868-14397887 | None:intergenic | 75.0% |
| !! | TCTGGCGGTGGCGGTGGCGG+TGG | - | chr1_2:14395422-14395441 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 14395147 | 14398659 | 14395147 | ID=Msa0058130;Name=Msa0058130 |
| chr1_2 | mRNA | 14395147 | 14398659 | 14395147 | ID=Msa0058130-mRNA-1;Parent=Msa0058130;Name=Msa0058130-mRNA-1;_AED=0.02;_eAED=0.02;_QI=317|1|1|1|1|1|7|303|330 |
| chr1_2 | exon | 14395147 | 14395454 | 14395147 | ID=Msa0058130-mRNA-1:exon:5768;Parent=Msa0058130-mRNA-1 |
| chr1_2 | exon | 14396139 | 14396179 | 14396139 | ID=Msa0058130-mRNA-1:exon:5769;Parent=Msa0058130-mRNA-1 |
| chr1_2 | exon | 14396382 | 14396480 | 14396382 | ID=Msa0058130-mRNA-1:exon:5770;Parent=Msa0058130-mRNA-1 |
| chr1_2 | exon | 14396584 | 14396640 | 14396584 | ID=Msa0058130-mRNA-1:exon:5771;Parent=Msa0058130-mRNA-1 |
| chr1_2 | exon | 14396729 | 14396792 | 14396729 | ID=Msa0058130-mRNA-1:exon:5772;Parent=Msa0058130-mRNA-1 |
| chr1_2 | exon | 14396881 | 14397090 | 14396881 | ID=Msa0058130-mRNA-1:exon:5773;Parent=Msa0058130-mRNA-1 |
| chr1_2 | exon | 14397826 | 14398659 | 14397826 | ID=Msa0058130-mRNA-1:exon:5774;Parent=Msa0058130-mRNA-1 |
| chr1_2 | five_prime_UTR | 14395147 | 14395454 | 14395147 | ID=Msa0058130-mRNA-1:five_prime_utr;Parent=Msa0058130-mRNA-1 |
| chr1_2 | five_prime_UTR | 14396139 | 14396147 | 14396139 | ID=Msa0058130-mRNA-1:five_prime_utr;Parent=Msa0058130-mRNA-1 |
| chr1_2 | CDS | 14396148 | 14396179 | 14396148 | ID=Msa0058130-mRNA-1:cds;Parent=Msa0058130-mRNA-1 |
| chr1_2 | CDS | 14396382 | 14396480 | 14396382 | ID=Msa0058130-mRNA-1:cds;Parent=Msa0058130-mRNA-1 |
| chr1_2 | CDS | 14396584 | 14396640 | 14396584 | ID=Msa0058130-mRNA-1:cds;Parent=Msa0058130-mRNA-1 |
| chr1_2 | CDS | 14396729 | 14396792 | 14396729 | ID=Msa0058130-mRNA-1:cds;Parent=Msa0058130-mRNA-1 |
| chr1_2 | CDS | 14396881 | 14397090 | 14396881 | ID=Msa0058130-mRNA-1:cds;Parent=Msa0058130-mRNA-1 |
| chr1_2 | CDS | 14397826 | 14398356 | 14397826 | ID=Msa0058130-mRNA-1:cds;Parent=Msa0058130-mRNA-1 |
| chr1_2 | three_prime_UTR | 14398357 | 14398659 | 14398357 | ID=Msa0058130-mRNA-1:three_prime_utr;Parent=Msa0058130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
