AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0112250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112250 MtrunA17_Chr1g0170261 99.388 981 5 1 22 1001 139 1119 0.0 2024
Msa0112250 MtrunA17_Chr3g0119031 81.994 983 173 3 22 1001 137 1118 0.0 1669
Msa0112250 MtrunA17_Chr5g0439971 81.282 983 180 3 22 1001 142 1123 0.0 1660
Msa0112250 MtrunA17_Chr5g0443194 57.785 289 103 4 419 689 147 434 4.27e-98 318
Msa0112250 MtrunA17_Chr5g0443181 47.241 290 102 4 413 702 84 322 6.36e-72 242
Msa0112250 MtrunA17_Chr5g0443151 47.636 275 132 6 493 763 17 283 2.69e-68 239
Msa0112250 MtrunA17_Chr5g0442971 48.973 292 107 6 417 706 226 477 1.19e-66 238
Msa0112250 MtrunA17_Chr3g0138791 34.247 292 164 11 84 362 107 383 6.91e-29 125
Msa0112250 MtrunA17_Chr1g0148321 30.618 356 198 14 84 405 107 447 1.72e-26 117
Msa0112250 MtrunA17_Chr5g0443161 61.446 83 32 0 413 495 156 238 8.53e-22 96.3
Msa0112250 MtrunA17_Chr4g0074041 25.876 371 212 13 84 438 92 415 4.41e-21 99.8
Msa0112250 MtrunA17_Chr6g0458421 26.230 305 196 12 84 373 29 319 1.40e-20 97.1
Msa0112250 MtrunA17_Chr3g0123951 26.101 318 183 8 85 361 24 330 1.76e-20 94.7
Msa0112250 MtrunA17_Chr3g0133061 26.837 313 182 13 85 370 585 877 4.20e-20 96.7
Msa0112250 MtrunA17_Chr8g0382161 26.706 337 192 11 85 379 24 347 1.74e-19 91.7
Msa0112250 MtrunA17_Chr5g0411271 25.581 301 200 10 84 373 154 441 4.90e-19 92.8
Msa0112250 MtrunA17_Chr6g0458441 25.939 293 190 13 84 362 127 406 7.40e-18 89.0
Msa0112250 MtrunA17_Chr6g0458431 24.351 308 198 12 84 373 94 384 4.36e-17 86.3
Msa0112250 MtrunA17_Chr2g0312901 25.000 316 206 10 78 373 16 320 7.69e-17 85.5
Msa0112250 MtrunA17_Chr4g0064671 27.111 225 108 7 192 367 14 231 1.62e-15 77.8
Msa0112250 MtrunA17_Chr8g0365831 23.101 316 209 12 71 370 151 448 3.17e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112250 AT5G06600.2 80.386 984 185 6 22 1001 136 1115 0.0 1634
Msa0112250 AT5G06600.1 80.386 984 185 6 22 1001 137 1116 0.0 1634
Msa0112250 AT3G11910.4 79.552 983 195 4 22 1001 135 1114 0.0 1631
Msa0112250 AT3G11910.3 79.552 983 195 4 22 1001 136 1115 0.0 1631
Msa0112250 AT3G11910.1 79.552 983 195 4 22 1001 136 1115 0.0 1631
Msa0112250 AT3G11910.2 79.552 983 195 4 22 1001 135 1114 0.0 1631
Msa0112250 AT5G06600.3 81.765 850 148 5 22 867 137 983 0.0 1426
Msa0112250 AT3G49600.2 29.345 351 214 12 84 411 106 445 6.25e-28 122
Msa0112250 AT3G49600.1 29.345 351 214 12 84 411 106 445 6.25e-28 122
Msa0112250 AT3G49600.3 31.250 288 179 9 84 363 106 382 1.50e-27 121
Msa0112250 AT2G22310.1 25.316 316 187 7 85 361 24 329 2.06e-21 97.8
Msa0112250 AT4G39910.1 26.549 339 194 13 85 379 24 351 4.15e-20 94.0
Msa0112250 AT2G22310.3 28.571 196 120 5 176 361 112 297 2.06e-17 85.1
Msa0112250 AT2G22310.2 28.571 196 120 5 176 361 107 292 2.32e-17 85.1
Msa0112250 AT3G14400.1 26.349 315 195 12 84 373 24 326 7.82e-17 85.9
Msa0112250 AT4G24560.1 28.065 310 184 14 84 370 542 835 9.41e-17 86.3
Msa0112250 AT5G46740.1 25.419 358 214 13 45 370 121 457 1.19e-16 85.5
Msa0112250 AT4G17895.1 25.000 336 196 15 67 372 157 466 4.39e-14 77.0
Msa0112250 AT5G46740.2 29.282 181 119 5 191 370 76 248 2.46e-13 74.3
Msa0112250 AT2G24640.2 28.652 178 111 7 191 363 125 291 6.59e-11 66.6
Msa0112250 AT2G24640.1 28.652 178 111 7 191 363 295 461 7.83e-11 66.6

Find 217 sgRNAs with CRISPR-Local

Find 1174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAAGCTGTGTTAATTTA+AGG 0.096130 1_3:-26720050 Msa0112250:three_prime_UTR
AACATGTTCGCACATGATTT+TGG 0.140151 1_3:+26728899 None:intergenic
TCATTCAGTACATAAGATTT+TGG 0.141825 1_3:-26720271 Msa0112250:three_prime_UTR
AGAATATTAATGATCATTAT+TGG 0.175111 1_3:-26724422 Msa0112250:CDS
TAGAAATGCAACCTTATATT+TGG 0.175639 1_3:-26719913 None:intergenic
TATTATTTCCAGTCGGTTTC+AGG 0.202322 1_3:-26721279 Msa0112250:intron
GAGTACTTTGTAAATTTAAA+AGG 0.221866 1_3:+26733007 None:intergenic
AGAGAACCCTGTTAAGTTCT+TGG 0.245960 1_3:+26736782 None:intergenic
AAAGAGTTAACCAAATCTTT+TGG 0.276067 1_3:-26736841 Msa0112250:CDS
CTTTCTGAGGATAACTTGTT+TGG 0.281035 1_3:-26737374 None:intergenic
CCTTACAATTAGATCTTGAT+AGG 0.285562 1_3:-26735694 Msa0112250:CDS
TGACTAACCTTTCTGAAATA+AGG 0.285682 1_3:+26737044 None:intergenic
CTTTGGAGACCCTTTCTTCT+TGG 0.286596 1_3:-26722773 Msa0112250:CDS
CATACCTTGAAAATGGTAAA+TGG 0.297202 1_3:+26732499 None:intergenic
TAGGCTGTGGTTTAGGTTGC+TGG 0.297497 1_3:+26726243 None:intergenic
CATAGGTCATACCTTGAAAA+TGG 0.297712 1_3:+26732492 None:intergenic
TTAGATCTTGATAGGGATAA+TGG 0.306686 1_3:-26735686 Msa0112250:CDS
ATGTGCAGGTTGTTCGCTTT+AGG 0.310881 1_3:-26726511 Msa0112250:intron
ATGATGTCCAAGAACTTAAC+AGG 0.326745 1_3:-26736789 Msa0112250:CDS
TTGGCCGAAATGTATGGTTT+TGG 0.327148 1_3:+26731673 None:intergenic
ACAGTTAAGGGAAGTTAATA+AGG 0.335759 1_3:-26729632 Msa0112250:CDS
GAAGAAGTTGCGAAAGAGTT+TGG 0.339349 1_3:-26731738 Msa0112250:CDS
TTTGTTTAAATCACTATTCA+AGG 0.340502 1_3:+26720344 None:intergenic
TGCAGAGCAGTATGGTTTAC+AGG 0.343261 1_3:-26736321 Msa0112250:intron
GTTCACAGCGGTGGAGTTCA+TGG 0.349100 1_3:-26733992 Msa0112250:CDS
AATACCTGTGAAGTGTATAA+AGG 0.350377 1_3:+26735624 None:intergenic
CAGTTACCTCTTACAAATCC+TGG 0.355815 1_3:-26733043 Msa0112250:CDS
CTGATAATATATTACCTGAT+TGG 0.359026 1_3:+26721033 None:intergenic
TGCATTCAATATAGTTCATA+TGG 0.361714 1_3:+26736567 None:intergenic
TGCGCAAAGATCTTGATTAC+TGG 0.363993 1_3:-26737163 Msa0112250:CDS
AATGGATGCATCCAAATATA+AGG 0.364591 1_3:+26719902 None:intergenic
TGTATCCCATCCAAAAGATT+TGG 0.366228 1_3:+26736831 None:intergenic
ATTGTTTGTTTGCAGTGTTT+TGG 0.368572 1_3:-26734014 Msa0112250:intron
AACTCCTCTTTCAGCTTCTC+AGG 0.378745 1_3:+26729414 None:intergenic
GATGATCTGCACGAGCAAAT+TGG 0.391133 1_3:-26732589 Msa0112250:CDS
GAAGTTAATAAGGCAAATAA+TGG 0.394667 1_3:-26729622 Msa0112250:CDS
TCAAAGAATGAAGGAACATC+TGG 0.402453 1_3:+26728519 None:intergenic
AGCTTCTTCAATATATCTAC+TGG 0.403647 1_3:+26729079 None:intergenic
AAGACTGAACTCATCTTCCT+TGG 0.405749 1_3:+26726475 None:intergenic
AACAGATCAATTTCTTCATC+CGG 0.405961 1_3:+26729034 None:intergenic
AGTACTGGATATTCCTCTTC+CGG 0.405994 1_3:-26726014 Msa0112250:CDS
GGCGCATGGGAGCAATATCT+TGG 0.407239 1_3:-26721097 Msa0112250:CDS
GGATATATTCTTTGATCTTG+TGG 0.407652 1_3:-26732563 Msa0112250:CDS
TACCTGATTGTCACGAAAAG+TGG 0.409677 1_3:+26728866 None:intergenic
TTAATGCGCGTGAGAGTGAT+TGG 0.411208 1_3:-26737280 Msa0112250:CDS
ATTTCTACTTTACTTGTCAA+TGG 0.413882 1_3:+26719929 None:intergenic
TCCTGATGCGGAACTTAGAT+TGG 0.416213 1_3:-26725382 Msa0112250:CDS
TACCTAAGCTTCTGGCTTGA+AGG 0.416724 1_3:+26729366 None:intergenic
GTTTAGAGAAGGGACATATA+CGG 0.418953 1_3:-26721118 Msa0112250:intron
TACTTGATAGGCTGTGGTTT+AGG 0.419413 1_3:+26726236 None:intergenic
GTTTAAATTCGATGATGAAC+GGG 0.420574 1_3:-26733246 Msa0112250:CDS
ATTGAAGAAGCTAAATGAAA+TGG 0.421894 1_3:-26729068 Msa0112250:CDS
AAAGCACGTACCTAAGCTTC+TGG 0.423420 1_3:+26729358 None:intergenic
AGCGCCAAAACCATACATTT+CGG 0.425954 1_3:-26731677 Msa0112250:CDS
TGTCACGAAAAGTGGACTTC+TGG 0.426149 1_3:+26728874 None:intergenic
TAACAAAAGAAGATACAAAC+AGG 0.426292 1_3:-26733223 Msa0112250:CDS
ATCGTTTAAACCAAGATGTT+GGG 0.426373 1_3:+26726304 None:intergenic
CCTATCAAGATCTAATTGTA+AGG 0.427249 1_3:+26735694 None:intergenic
ATTTAATCACAAGATCTATA+AGG 0.427374 1_3:-26725352 Msa0112250:intron
TTTAGCTGATGTCAAATTGC+GGG 0.427811 1_3:-26722731 Msa0112250:CDS
CACTTTGCTTTAGTTGGAGA+TGG 0.428252 1_3:-26720169 Msa0112250:three_prime_UTR
AGCTTCTCAGGAGGACGAAT+AGG 0.428537 1_3:+26729426 None:intergenic
ATCATCTTGACCAGTCAGTT+TGG 0.430727 1_3:-26720481 Msa0112250:three_prime_UTR
AACCCCTCGATGGGTGAATC+GGG 0.430917 1_3:+26720194 None:intergenic
TGAGCTGTCACTGGTCTACT+TGG 0.432854 1_3:+26731654 None:intergenic
ACCAATCTAAGTTCCGCATC+AGG 0.434745 1_3:+26725381 None:intergenic
TCTATATATATGTTTCCTAC+AGG 0.436437 1_3:-26720124 Msa0112250:three_prime_UTR
TATCAGCATGTTCAGAACTT+TGG 0.437054 1_3:-26722790 Msa0112250:intron
TAGATCTTGATAGGGATAAT+GGG 0.437845 1_3:-26735685 Msa0112250:CDS
AAGATCATATACAGCCAATC+AGG 0.438368 1_3:-26721047 Msa0112250:intron
TTTGTTTCGTCAGGTATGTT+GGG 0.439184 1_3:-26729129 Msa0112250:intron
TGCACATATTCAAAGAATGA+AGG 0.441001 1_3:+26728510 None:intergenic
GTCTACTTGGCCGAAATGTA+TGG 0.442229 1_3:+26731667 None:intergenic
GACAGCTCAGGAGGAAGCAC+AGG 0.444220 1_3:-26731640 Msa0112250:CDS
GATCGTTTAAACCAAGATGT+TGG 0.445357 1_3:+26726303 None:intergenic
TTCTTCAGCTTCAGTTAAAA+CGG 0.445451 1_3:-26736137 Msa0112250:CDS
AGACTGAACTCATCTTCCTT+GGG 0.445842 1_3:+26726476 None:intergenic
TCCACTCCTCGGTACTTGAT+AGG 0.447422 1_3:+26726224 None:intergenic
AAACCCCTCGATGGGTGAAT+CGG 0.449190 1_3:+26720193 None:intergenic
AAGTATCATGCAGAGCAGTA+TGG 0.452897 1_3:-26736329 Msa0112250:CDS
AGAGAAGAAGAAGAAGGAAA+AGG 0.454355 1_3:-26732779 Msa0112250:CDS
TAATGCGCGTGAGAGTGATT+GGG 0.455780 1_3:-26737279 Msa0112250:CDS
ACTGAAAATGATATGCCATC+TGG 0.457124 1_3:-26736931 Msa0112250:CDS
GAAAGAGTCTCCCAACATCT+TGG 0.457657 1_3:-26726314 Msa0112250:CDS
CGAATACTTCTGTCTGCGTC+AGG 0.461639 1_3:+26735650 None:intergenic
GCTGTCCATCGCCAGCTGGA+GGG 0.462001 1_3:+26728556 None:intergenic
GCCATCTGGGAGCATCCCTC+TGG 0.463909 1_3:-26736917 Msa0112250:CDS
TTCTTCTTGGTTATCCGTGA+GGG 0.464212 1_3:-26722760 Msa0112250:CDS
GAGATGGCGCTTTGAGTTGT+TGG 0.466169 1_3:-26720153 Msa0112250:three_prime_UTR
AAATAATATCTGAATCTTGA+AGG 0.466489 1_3:+26721294 None:intergenic
TGCTGCTGTCCATCGCCAGC+TGG 0.470315 1_3:+26728552 None:intergenic
AAGTTTGCATTTGTCTCACT+TGG 0.470391 1_3:-26721329 Msa0112250:CDS
TTTAACTGAAGCTGAAGAAC+AGG 0.471336 1_3:+26736141 None:intergenic
TGCTGTCCATCGCCAGCTGG+AGG 0.475831 1_3:+26728555 None:intergenic
GCTTCCTCCTGAGCTGTCAC+TGG 0.476962 1_3:+26731645 None:intergenic
TGAAGAAATTGATCTGTTTG+AGG 0.478272 1_3:-26729029 Msa0112250:intron
ACCACTGATTTGAAAGAGTC+GGG 0.480454 1_3:+26733945 None:intergenic
AATCTTATGTACTGAATGAC+AGG 0.485959 1_3:+26720275 None:intergenic
AACCTTCAAGCCAGAAGCTT+AGG 0.487936 1_3:-26729368 Msa0112250:intron
GAGAAAGCTTCTACGGCAGC+TGG 0.488635 1_3:+26720447 None:intergenic
GCAGTATGGTGGTGAAGAAG+AGG 0.488818 1_3:-26733189 Msa0112250:intron
TCACATTCCTTATTTCAGAA+AGG 0.489887 1_3:-26737051 Msa0112250:intron
AGATGGCGCTTTGAGTTGTT+GGG 0.491456 1_3:-26720152 Msa0112250:three_prime_UTR
TCATGTAACAAGTAGCTCCT+TGG 0.493061 1_3:+26737096 None:intergenic
TTGAACCCAGGATTTGTAAG+AGG 0.493196 1_3:+26733037 None:intergenic
GACAGTACTAACTTCATCCT+TGG 0.498344 1_3:+26725946 None:intergenic
CCACCACGAGAAAGCTTCTA+CGG 0.499617 1_3:+26720440 None:intergenic
TGTGTTTCTGCAATATCAAA+AGG 0.500077 1_3:+26737311 None:intergenic
ATCGAAGACTGTCAATAGAA+AGG 0.501386 1_3:+26720019 None:intergenic
TCACGGATAACCAAGAAGAA+AGG 0.501850 1_3:+26722763 None:intergenic
TATTCTATACTATGAAGTAC+TGG 0.503709 1_3:-26726029 Msa0112250:CDS
TGCGCGAGACACTATGGTAA+AGG 0.504586 1_3:-26736100 Msa0112250:intron
AGGCTGTGGTTTAGGTTGCT+GGG 0.507211 1_3:+26726244 None:intergenic
AAGTAGACCAGTGACAGCTC+AGG 0.509457 1_3:-26731652 Msa0112250:CDS
TGAAATTACCTGAAACCGAC+TGG 0.511332 1_3:+26721271 None:intergenic
CTGTCCATCGCCAGCTGGAG+GGG 0.511522 1_3:+26728557 None:intergenic
CCTCGGTACTTGATAGGCTG+TGG 0.514217 1_3:+26726230 None:intergenic
TTTCAGAAGTCCCCTCCAGC+TGG 0.515119 1_3:-26728567 Msa0112250:CDS
AAGGTTAAAGAAAGAACAAG+AGG 0.516827 1_3:-26732806 Msa0112250:CDS
GGATCAATTGTCTGACATGC+TGG 0.517533 1_3:-26726204 Msa0112250:CDS
GGCTATACTCAGCACATCCT+AGG 0.522478 1_3:+26720365 None:intergenic
AAGAAGCTAAATGAAATGGC+TGG 0.524068 1_3:-26729064 Msa0112250:CDS
AAGTCCCCTCCAGCTGGCGA+TGG 0.524459 1_3:-26728561 Msa0112250:CDS
CATGCTGGTTCACTACAATC+AGG 0.525999 1_3:-26726189 Msa0112250:intron
CACGGATAACCAAGAAGAAA+GGG 0.528312 1_3:+26722764 None:intergenic
CTGAACACCTAAAATTGCTC+CGG 0.530957 1_3:+26720315 None:intergenic
ACAGCTTACTTGAAGGTGGC+TGG 0.530996 1_3:+26732907 None:intergenic
GGTTTAAATTCGATGATGAA+CGG 0.531000 1_3:-26733247 Msa0112250:CDS
AGGGCTTTAGAAGAGCAGTA+TGG 0.531445 1_3:-26733203 Msa0112250:CDS
TCCTCCTGAGAAGCTGAAAG+AGG 0.531760 1_3:-26729418 Msa0112250:CDS
CTTCATCCTTGGCATCATGA+TGG 0.536314 1_3:+26725957 None:intergenic
CCGGAAGAAGAGAAAAGCCT+TGG 0.537812 1_3:-26723014 Msa0112250:CDS
TGAAATGGCTGGATTTGATC+CGG 0.539715 1_3:-26729053 Msa0112250:CDS
GCAACCTTTATACACTTCAC+AGG 0.539923 1_3:-26735628 Msa0112250:intron
AGTTACCTCTTACAAATCCT+GGG 0.542184 1_3:-26733042 Msa0112250:CDS
TGCTTTCCATCATGATGCCA+AGG 0.543330 1_3:-26725963 Msa0112250:CDS
CTTACAATTAGATCTTGATA+GGG 0.543468 1_3:-26735693 Msa0112250:CDS
ACTATACAGAAGTTGTTTGA+AGG 0.544486 1_3:-26736593 Msa0112250:CDS
CTGAAAATGATATGCCATCT+GGG 0.544979 1_3:-26736930 Msa0112250:CDS
GCTTCTACGGCAGCTGGACA+TGG 0.546012 1_3:+26720453 None:intergenic
GCGCAAAGATCTTGATTACT+GGG 0.546659 1_3:-26737162 Msa0112250:CDS
TTTGGAAATAGAAATGGGGC+AGG 0.547008 1_3:-26729584 Msa0112250:intron
AAAGCCTTGGCCCTCACGAT+CGG 0.547788 1_3:-26723001 Msa0112250:CDS
CATCAATTTGACACAAGGTC+GGG 0.548248 1_3:+26719965 None:intergenic
CAGTCTTCGATTAGCTGATG+TGG 0.548684 1_3:-26720007 Msa0112250:three_prime_UTR
GAAGGGACATATACGGCGCA+TGG 0.548705 1_3:-26721111 Msa0112250:CDS
CTATCAAGATCTAATTGTAA+GGG 0.549176 1_3:+26735695 None:intergenic
AACAAACTCTGTAATGCCAG+AGG 0.550134 1_3:+26736901 None:intergenic
TACTTGTCAATGGCTTATCA+CGG 0.553282 1_3:+26719939 None:intergenic
TGTATAGAAAGTATAGGCAT+AGG 0.553968 1_3:-26720239 Msa0112250:three_prime_UTR
TACCACTGATTTGAAAGAGT+CGG 0.558010 1_3:+26733944 None:intergenic
GGATAAGATAATTTGTAATG+TGG 0.558559 1_3:-26732945 Msa0112250:CDS
AAAGGAGAGTTGTTGAACCC+AGG 0.558997 1_3:+26733025 None:intergenic
CAAAGTGAAAACCCCTCGAT+GGG 0.561645 1_3:+26720185 None:intergenic
GCAAAGTGAAAACCCCTCGA+TGG 0.562527 1_3:+26720184 None:intergenic
TCATTTGTACACCATTGTAA+AGG 0.565109 1_3:-26732749 Msa0112250:intron
AATTTGTAATGTGGATGAGA+AGG 0.565506 1_3:-26732936 Msa0112250:CDS
GTGGAAGTAGAACAGCTTGA+GGG 0.565647 1_3:-26736359 Msa0112250:CDS
GATCTTCAGCTTGATGTCAA+AGG 0.567722 1_3:-26736416 Msa0112250:CDS
TTGCCCGATTCACCCATCGA+GGG 0.568211 1_3:-26720197 Msa0112250:three_prime_UTR
CTATATATATGTTTCCTACA+GGG 0.571209 1_3:-26720123 Msa0112250:three_prime_UTR
TCTGAATCTTGAAGGTACTC+AGG 0.573337 1_3:+26721302 None:intergenic
AACTGAAGCTGAAGAACAGG+TGG 0.576147 1_3:+26736144 None:intergenic
TTTCAGGGAACTGTTGTGGA+AGG 0.577078 1_3:-26736617 Msa0112250:intron
AATTAATGATCTAAAATCAA+AGG 0.578639 1_3:-26725803 Msa0112250:intron
TTTCTTCTTGGTTATCCGTG+AGG 0.579843 1_3:-26722761 Msa0112250:CDS
TGCCCGATTCACCCATCGAG+GGG 0.579980 1_3:-26720196 Msa0112250:three_prime_UTR
CATGGTAATACCAAACTGAC+TGG 0.580362 1_3:+26720471 None:intergenic
TCCTCTTTCAGCTTCTCAGG+AGG 0.580821 1_3:+26729417 None:intergenic
AATGCGCGTGAGAGTGATTG+GGG 0.581175 1_3:-26737278 Msa0112250:CDS
GCCCGACTCTTTCAAATCAG+TGG 0.582908 1_3:-26733946 Msa0112250:intron
CCGTAGAAGCTTTCTCGTGG+TGG 0.583247 1_3:-26720440 Msa0112250:three_prime_UTR
TGATTTAAACAAATTTACTC+CGG 0.585386 1_3:-26720334 Msa0112250:three_prime_UTR
ACATGTATCATCCGATCGTG+AGG 0.587253 1_3:+26722990 None:intergenic
GAAGTTGCAAGTTCCAAATG+AGG 0.588855 1_3:-26722701 Msa0112250:CDS
AAGGGACATATACGGCGCAT+GGG 0.590067 1_3:-26721110 Msa0112250:CDS
TCATCCGATCGTGAGGGCCA+AGG 0.590873 1_3:+26722997 None:intergenic
GAAGAAGAAGGAAAAGGCTG+AGG 0.591544 1_3:-26732773 Msa0112250:CDS
GTTTCGTCAGGTATGTTGGG+AGG 0.596574 1_3:-26729126 Msa0112250:intron
TCCACAACATAGCCTCTACT+AGG 0.596783 1_3:+26737218 None:intergenic
TAGACCAGTGACAGCTCAGG+AGG 0.602851 1_3:-26731649 Msa0112250:CDS
AGACACTGCTCAAAATCAGA+TGG 0.603971 1_3:-26722952 Msa0112250:intron
AAAGCTAGAAGACAAAATGA+AGG 0.607281 1_3:-26736755 Msa0112250:intron
GCCTATCAAGTACCGAGGAG+TGG 0.608291 1_3:-26726225 Msa0112250:CDS
ACATCAATTTGACACAAGGT+CGG 0.608519 1_3:+26719964 None:intergenic
TGTGGAAGTAGAACAGCTTG+AGG 0.609687 1_3:-26736360 Msa0112250:CDS
TTGGACATTACGAGCAGAGG+AGG 0.609951 1_3:-26724403 Msa0112250:intron
TATCAAGATCTAATTGTAAG+GGG 0.610556 1_3:+26735696 None:intergenic
GCCAGAGGGATGCTCCCAGA+TGG 0.612314 1_3:+26736916 None:intergenic
ATTCAGATATTATTTCCAGT+CGG 0.612576 1_3:-26721286 Msa0112250:CDS
TTATTGGACATTACGAGCAG+AGG 0.613030 1_3:-26724406 Msa0112250:CDS
GGATCATACAATTCAGCAAG+AGG 0.617299 1_3:+26737239 None:intergenic
ATTGCCCGATTCACCCATCG+AGG 0.618885 1_3:-26720198 Msa0112250:three_prime_UTR
CTTTAGCTGATGTCAAATTG+CGG 0.620059 1_3:-26722732 Msa0112250:CDS
ACAAACTCTGTAATGCCAGA+GGG 0.625922 1_3:+26736902 None:intergenic
TCCTAGTAGAGGCTATGTTG+TGG 0.625984 1_3:-26737219 Msa0112250:CDS
CAGCTAAAGTCTCACCCTCA+CGG 0.627905 1_3:+26722746 None:intergenic
CATGTATCATCCGATCGTGA+GGG 0.628501 1_3:+26722991 None:intergenic
CTATGTTCGTGAAAGTGACA+AGG 0.634378 1_3:-26732966 Msa0112250:CDS
TCAGACAGCTTACTTGAAGG+TGG 0.638803 1_3:+26732903 None:intergenic
GAATTGTATGATCCTAGTAG+AGG 0.640831 1_3:-26737230 Msa0112250:CDS
CTATATTGAATGCATGAATG+TGG 0.644705 1_3:-26736558 Msa0112250:CDS
ATTCAATATAGTTCATATGG+TGG 0.646922 1_3:+26736570 None:intergenic
CAGACAATTGATCCACTCCT+CGG 0.649064 1_3:+26726213 None:intergenic
AGATTTATCACATCCTGATG+CGG 0.653603 1_3:-26725394 Msa0112250:CDS
TCTGCACGAGCAAATTGGAA+AGG 0.658531 1_3:-26732584 Msa0112250:CDS
GCTTTAGAAGAGCAGTATGG+TGG 0.667170 1_3:-26733200 Msa0112250:CDS
CTGCCGTAGAAGCTTTCTCG+TGG 0.667535 1_3:-26720443 Msa0112250:three_prime_UTR
GGATACATCAATTTGACACA+AGG 0.686842 1_3:+26719960 None:intergenic
TGGAGTTGTGACCTTTACAA+TGG 0.695717 1_3:+26732738 None:intergenic
ATTGTAAGGGGAACTCATAG+CGG 0.696550 1_3:+26735708 None:intergenic
CACAGCGGTGGAGTTCATGG+TGG 0.712784 1_3:-26733989 Msa0112250:CDS
ATTACAGAAGCACAGTACTG+TGG 0.712888 1_3:-26725833 Msa0112250:CDS
TGATGTCCAAGAACTTAACA+GGG 0.715890 1_3:-26736788 Msa0112250:CDS
CCACAGCCTATCAAGTACCG+AGG 0.734770 1_3:-26726230 Msa0112250:CDS
AACAAAAGAAGATACAAACA+GGG 0.741092 1_3:-26733222 Msa0112250:CDS
GGAAGACAGATGCATACTTG+AGG 0.749512 1_3:-26737198 Msa0112250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAAAAAAAATAATA+AGG - chr1_3:26721717-26721736 Msa0112250:intron 0.0%
!!! AATATATTTTAATAATTAAA+TGG + chr1_3:26728120-26728139 None:intergenic 0.0%
!! TAACTTTATAACTTTATAAT+TGG - chr1_3:26723131-26723150 Msa0112250:intron 10.0%
!! TATACATATAATATAATAAG+TGG + chr1_3:26723184-26723203 None:intergenic 10.0%
!! TAATTACATAATAAAATCAT+AGG + chr1_3:26724801-26724820 None:intergenic 10.0%
!!! CAAATAATAATTAGTTTTAT+AGG + chr1_3:26725475-26725494 None:intergenic 10.0%
!!! TTAGTAAATAAAAAGAATTT+TGG + chr1_3:26725845-26725864 None:intergenic 10.0%
!! ATAATTTGATAAATGAATAA+AGG - chr1_3:26727529-26727548 Msa0112250:intron 10.0%
!!! TTTTTTAAGTGTATATTTAA+TGG - chr1_3:26727569-26727588 Msa0112250:intron 10.0%
!!! TATGTACTATTTATTTTAAT+TGG - chr1_3:26728797-26728816 Msa0112250:intron 10.0%
!!! TTATTGATTATAAATTTGTA+GGG - chr1_3:26729048-26729067 Msa0112250:CDS 10.0%
!! AATAATACTTTATAAAGTAA+TGG - chr1_3:26729173-26729192 Msa0112250:intron 10.0%
!! AAATATCAAAATATAATACT+AGG + chr1_3:26731609-26731628 None:intergenic 10.0%
!!! ACTATTATAAAAATTAGTTT+TGG - chr1_3:26734075-26734094 Msa0112250:intron 10.0%
!! TTTAAAAAAAAAATTGATCT+TGG + chr1_3:26735016-26735035 None:intergenic 10.0%
!!! TAAATAATTTTTTTTTGAAG+AGG - chr1_3:26735711-26735730 Msa0112250:CDS 10.0%
!! AACAAACAATATTAAACATA+AGG + chr1_3:26720298-26720317 None:intergenic 15.0%
!! AAATATGAAGAAAAAATAGT+AGG + chr1_3:26721031-26721050 None:intergenic 15.0%
!!! TTTTTCTTCATATTTTAGAT+TGG - chr1_3:26721036-26721055 Msa0112250:intron 15.0%
!!! TTTTTATTTTATTTTCTTGC+TGG - chr1_3:26721260-26721279 Msa0112250:intron 15.0%
!!! CTTTGTTGATTTTAAATATA+AGG - chr1_3:26721682-26721701 Msa0112250:intron 15.0%
!!! TTTTTTTTTTCTGTTTGATT+TGG - chr1_3:26721747-26721766 Msa0112250:intron 15.0%
!! TTGTCTTTGAATATATAATA+TGG + chr1_3:26722828-26722847 None:intergenic 15.0%
!! TTAGGCTAATATATATAATA+TGG + chr1_3:26722898-26722917 None:intergenic 15.0%
!!! ATATTATATATATTAGCCTA+AGG - chr1_3:26722897-26722916 Msa0112250:intron 15.0%
!! TAAAACCAATCATTTAAAAA+TGG + chr1_3:26723719-26723738 None:intergenic 15.0%
!!! ATTTCAAGTAATGATAAAAA+AGG + chr1_3:26723779-26723798 None:intergenic 15.0%
!!! TATATTATATCCATGTTTTT+TGG - chr1_3:26723958-26723977 Msa0112250:intron 15.0%
!!! TGTCATTATTTTTTTTCTTT+TGG - chr1_3:26724574-26724593 Msa0112250:intron 15.0%
!!! GTCATTATTTTTTTTCTTTT+GGG - chr1_3:26724575-26724594 Msa0112250:intron 15.0%
!!! ATTTTATTTTATTCATCTGT+TGG - chr1_3:26724643-26724662 Msa0112250:intron 15.0%
!!! TGTTAAATTATTCTTTGTTT+TGG - chr1_3:26725176-26725195 Msa0112250:intron 15.0%
!!! TCCTTAATAATGTTTTTTTT+TGG - chr1_3:26725809-26725828 Msa0112250:CDS 15.0%
!! ACCAAAAAAAAACATTATTA+AGG + chr1_3:26725813-26725832 None:intergenic 15.0%
!! TTATTCATATTTACTCAAAT+AGG + chr1_3:26726821-26726840 None:intergenic 15.0%
!!! TTATATTACATTTTGTATTC+TGG - chr1_3:26726857-26726876 Msa0112250:intron 15.0%
!! AATACATTTATGTTTAAGAA+AGG + chr1_3:26727364-26727383 None:intergenic 15.0%
!! AATACATTTATGTTTAAGAA+AGG + chr1_3:26727364-26727383 None:intergenic 15.0%
!! ATGTCATTATCAATAAATAT+TGG + chr1_3:26727491-26727510 None:intergenic 15.0%
!!! CATAACATTTTTATCATTTT+AGG - chr1_3:26727614-26727633 Msa0112250:intron 15.0%
!!! TTATTTTTGGAAATAGAAAT+GGG - chr1_3:26727684-26727703 Msa0112250:intron 15.0%
!!! GTTATTGATTATAAATTTGT+AGG - chr1_3:26729047-26729066 Msa0112250:CDS 15.0%
!!! TATTGATTATAAATTTGTAG+GGG - chr1_3:26729049-26729068 Msa0112250:CDS 15.0%
!! GTTAGATAAATGTATTAAAA+AGG + chr1_3:26730209-26730228 None:intergenic 15.0%
!! TAAAACCATTATAAATAGAA+GGG - chr1_3:26730527-26730546 Msa0112250:intron 15.0%
!!! TTTTATTTGATTTTATGTCT+AGG - chr1_3:26731214-26731233 Msa0112250:intron 15.0%
!!! AATTAATGATCTAAAATCAA+AGG - chr1_3:26731470-26731489 Msa0112250:intron 15.0%
!! AGAATATTAATGATCATTAT+TGG - chr1_3:26732851-26732870 Msa0112250:intron 15.0%
!!! TCATATTTGTTTTTTAGATT+GGG + chr1_3:26733478-26733497 None:intergenic 15.0%
!!! ATCATATTTGTTTTTTAGAT+TGG + chr1_3:26733479-26733498 None:intergenic 15.0%
!!! ACTTGTTTTTATTTTTAGAT+GGG + chr1_3:26733736-26733755 None:intergenic 15.0%
!!! AACTTGTTTTTATTTTTAGA+TGG + chr1_3:26733737-26733756 None:intergenic 15.0%
!!! ACATAATAACATTTTTATCA+TGG - chr1_3:26733846-26733865 Msa0112250:intron 15.0%
!! AGAATTAAAAAGAGTTAAAT+AGG + chr1_3:26734642-26734661 None:intergenic 15.0%
!! TTATTGTATGTAACTTAATA+TGG - chr1_3:26735367-26735386 Msa0112250:intron 15.0%
!!! TTTTTTACTTCAAATTCAAA+TGG + chr1_3:26735438-26735457 None:intergenic 15.0%
!! AGTAATAACATAATATTGTT+TGG - chr1_3:26736130-26736149 Msa0112250:CDS 15.0%
!!! TGTATTTTTAGATAAAAGTA+AGG - chr1_3:26736348-26736367 Msa0112250:CDS 15.0%
!!! GTTAGTTTACAATATAATAA+TGG - chr1_3:26736626-26736645 Msa0112250:intron 15.0%
!!! TTTAATTTTTTTCCGAAAGA+AGG - chr1_3:26720267-26720286 Msa0112250:three_prime_UTR 20.0%
!! ATGTTTAATATTGTTTGTTC+AGG - chr1_3:26720299-26720318 Msa0112250:three_prime_UTR 20.0%
!!! ACAAGAAAAGAATCATTTTA+TGG - chr1_3:26720749-26720768 Msa0112250:intron 20.0%
!!! ATTTTATGGTAGGTATTTTT+TGG - chr1_3:26720763-26720782 Msa0112250:intron 20.0%
!! TGAAATAATTGAAATTCAGA+AGG + chr1_3:26720832-26720851 None:intergenic 20.0%
!!! CAATAGTAAATATCCATTTT+GGG - chr1_3:26721317-26721336 Msa0112250:CDS 20.0%
!!! AATAGTAAATATCCATTTTG+GGG - chr1_3:26721318-26721337 Msa0112250:CDS 20.0%
!! AAATATTTAAACATCAGAGT+AGG + chr1_3:26721392-26721411 None:intergenic 20.0%
!!! TTTTTAATGCTTGTTTGAAT+TGG - chr1_3:26721807-26721826 Msa0112250:intron 20.0%
!!! TTTTAATGCTTGTTTGAATT+GGG - chr1_3:26721808-26721827 Msa0112250:intron 20.0%
!! GAATTTCACTCATTATTATT+TGG + chr1_3:26721967-26721986 None:intergenic 20.0%
!! TTCAATAGGTTCAAAATAAT+AGG + chr1_3:26722019-26722038 None:intergenic 20.0%
!!! ACATACTAATCATTTGATTT+TGG + chr1_3:26722052-26722071 None:intergenic 20.0%
!! TTGTCAAATAGTCAATATTT+AGG - chr1_3:26722108-26722127 Msa0112250:intron 20.0%
!! ATGAGCTTGAATATATAATA+TGG + chr1_3:26722868-26722887 None:intergenic 20.0%
!!! GAAAACAATATTTTATCAGT+CGG + chr1_3:26723084-26723103 None:intergenic 20.0%
!!! TATTTTTTTGTTGATATTGC+AGG - chr1_3:26723563-26723582 Msa0112250:intron 20.0%
!! AGTAATGATAAAAAAGGATA+TGG + chr1_3:26723773-26723792 None:intergenic 20.0%
!!! AGTTTCATCATTTTTGTTTA+TGG - chr1_3:26723842-26723861 Msa0112250:intron 20.0%
!!! CTCTATTTTTGTTTTGTTTT+TGG - chr1_3:26724137-26724156 Msa0112250:intron 20.0%
!! GAGTACTTTGTAAATTTAAA+AGG + chr1_3:26724269-26724288 None:intergenic 20.0%
!!! TCTAAAATGTATTGTTGAAA+AGG + chr1_3:26724446-26724465 None:intergenic 20.0%
!!! TCAACAATACATTTTAGATA+AGG - chr1_3:26724448-26724467 Msa0112250:CDS 20.0%
!! TGTCTAATAAATCCTTAATT+TGG - chr1_3:26724822-26724841 Msa0112250:intron 20.0%
!! AATAATGAAACACATAACAT+TGG + chr1_3:26725681-26725700 None:intergenic 20.0%
!! TTCATTATTTCATAAATAGC+AGG - chr1_3:26725692-26725711 Msa0112250:intron 20.0%
!! TCATTATTTCATAAATAGCA+GGG - chr1_3:26725693-26725712 Msa0112250:intron 20.0%
!!! TAGTTTATTTTTTTGGTAGA+AGG - chr1_3:26725916-26725935 Msa0112250:intron 20.0%
!!! AGTTTATTTTTTTGGTAGAA+GGG - chr1_3:26725917-26725936 Msa0112250:intron 20.0%
!! TCTGTATTTATGATAGAATT+GGG + chr1_3:26726163-26726182 None:intergenic 20.0%
!! TTGAAGGTTATAAATAGTAA+GGG + chr1_3:26726205-26726224 None:intergenic 20.0%
!! TTTGAAGGTTATAAATAGTA+AGG + chr1_3:26726206-26726225 None:intergenic 20.0%
!! CTAATGAAATTATTGAAAGT+AGG + chr1_3:26726253-26726272 None:intergenic 20.0%
!!! AGTTTTTTCTTTTATAGAGA+AGG - chr1_3:26726711-26726730 Msa0112250:intron 20.0%
!!! GTTTTTTCTTTTATAGAGAA+GGG - chr1_3:26726712-26726731 Msa0112250:intron 20.0%
!!! GACTAAAAGGTTTTATTTAA+CGG + chr1_3:26726786-26726805 None:intergenic 20.0%
!! AATATGAGAAAAACTAATGT+AGG + chr1_3:26726930-26726949 None:intergenic 20.0%
!! AAAAAGCTAGACTTAAAAAT+AGG - chr1_3:26727159-26727178 Msa0112250:intron 20.0%
!!! AGTTATTTTTTAAGGTGTTT+GGG + chr1_3:26727257-26727276 None:intergenic 20.0%
!!! TTACTCACAGTTATTTTTTA+AGG + chr1_3:26727265-26727284 None:intergenic 20.0%
!!! GCTTATGAACAATTTATTTT+GGG + chr1_3:26727293-26727312 None:intergenic 20.0%
!!! ATTGATAATGACATGATAAA+AGG - chr1_3:26727497-26727516 Msa0112250:intron 20.0%
!!! TTGATAATGACATGATAAAA+GGG - chr1_3:26727498-26727517 Msa0112250:intron 20.0%
!!! ACATTTTTATCATTTTAGGT+TGG - chr1_3:26727618-26727637 Msa0112250:intron 20.0%
!!! GTTATTTTTGGAAATAGAAA+TGG - chr1_3:26727683-26727702 Msa0112250:intron 20.0%
!!! TATTTTTGGAAATAGAAATG+GGG - chr1_3:26727685-26727704 Msa0112250:intron 20.0%
!! ATATTTATATGAAGGATGTT+TGG + chr1_3:26727991-26728010 None:intergenic 20.0%
!! TCAAGTTCATATTTATATGA+AGG + chr1_3:26727999-26728018 None:intergenic 20.0%
!! TTCATATAAATATGAACTTG+AGG - chr1_3:26727998-26728017 Msa0112250:intron 20.0%
!! CTATATTGATATTTCAATCA+TGG + chr1_3:26728303-26728322 None:intergenic 20.0%
!! ATCAGGTATAAATTATATAC+TGG - chr1_3:26728422-26728441 Msa0112250:intron 20.0%
!!! TGTTTTAAGTGTTCATTATT+TGG - chr1_3:26728511-26728530 Msa0112250:CDS 20.0%
!! AATAAATAGTACATACTTGA+CGG + chr1_3:26728792-26728811 None:intergenic 20.0%
!! ATCAGAGAAAAAGAAATTAT+AGG + chr1_3:26728823-26728842 None:intergenic 20.0%
!!! TATCTTTTAGAAGTTAGAAT+AGG - chr1_3:26728956-26728975 Msa0112250:intron 20.0%
!!! ATCTTTTAGAAGTTAGAATA+GGG - chr1_3:26728957-26728976 Msa0112250:intron 20.0%
!! AGAATAAATATACAAGTGAT+TGG - chr1_3:26729007-26729026 Msa0112250:intron 20.0%
!! CAAAAGACAATCTTTATAAT+AGG + chr1_3:26729302-26729321 None:intergenic 20.0%
!! TTGAGAAACAAATAAATACT+GGG + chr1_3:26729494-26729513 None:intergenic 20.0%
!! TTAAAAGAATTTACGAATCT+AGG + chr1_3:26729821-26729840 None:intergenic 20.0%
!! TAAGATTGGATTATAAATTG+TGG - chr1_3:26729923-26729942 Msa0112250:intron 20.0%
!! GTAAAACCATTATAAATAGA+AGG - chr1_3:26730526-26730545 Msa0112250:intron 20.0%
!!! TGAAAATAATCTTACGTTTT+GGG - chr1_3:26730682-26730701 Msa0112250:intron 20.0%
!! AGCACATTAATTAATTGAAA+AGG + chr1_3:26730739-26730758 None:intergenic 20.0%
!!! AAAAGTAAATAACTCTGAAA+AGG + chr1_3:26731366-26731385 None:intergenic 20.0%
!! AAAAATACTCATCTAAGTAT+TGG + chr1_3:26731580-26731599 None:intergenic 20.0%
!! ATTTAATCACAAGATCTATA+AGG - chr1_3:26731921-26731940 Msa0112250:intron 20.0%
!!! ATCTTACTTGATTTTGAATT+CGG + chr1_3:26732446-26732465 None:intergenic 20.0%
!! AATTCAAAATCAAGTAAGAT+GGG - chr1_3:26732446-26732465 Msa0112250:intron 20.0%
!!! TTATTTTCTATCTCTTATGA+TGG - chr1_3:26732564-26732583 Msa0112250:CDS 20.0%
!!! TATTTTCTATCTCTTATGAT+GGG - chr1_3:26732565-26732584 Msa0112250:CDS 20.0%
!!! ATGATATATTGTTTTGTTGT+TGG - chr1_3:26732913-26732932 Msa0112250:intron 20.0%
!!! TGATATATTGTTTTGTTGTT+GGG - chr1_3:26732914-26732933 Msa0112250:intron 20.0%
!! TTCACTATAATAATTGCATT+TGG - chr1_3:26733251-26733270 Msa0112250:intron 20.0%
!!! GACTATTAGGATTTTATATT+GGG + chr1_3:26733687-26733706 None:intergenic 20.0%
!!! AGACTATTAGGATTTTATAT+TGG + chr1_3:26733688-26733707 None:intergenic 20.0%
!! AATATAAAATCCTAATAGTC+TGG - chr1_3:26733687-26733706 Msa0112250:intron 20.0%
!! TAAAATTAATCCAGACTATT+AGG + chr1_3:26733700-26733719 None:intergenic 20.0%
!!! TTTTTGCTACAAGTTTTATA+TGG - chr1_3:26734216-26734235 Msa0112250:intron 20.0%
!!! ATAACATTTGAAAGTTTTAG+AGG + chr1_3:26734442-26734461 None:intergenic 20.0%
!! ATCAAAATAATTAACGATCA+AGG - chr1_3:26734696-26734715 Msa0112250:intron 20.0%
!!! TTTTCGGTTCATTTTATATA+AGG + chr1_3:26734722-26734741 None:intergenic 20.0%
!! TAACTTAATATGGTGATATT+TGG - chr1_3:26735377-26735396 Msa0112250:intron 20.0%
!! AACTTAATATGGTGATATTT+GGG - chr1_3:26735378-26735397 Msa0112250:intron 20.0%
!! AAATAATATCTGAATCTTGA+AGG + chr1_3:26735982-26736001 None:intergenic 20.0%
!! TCATATTATACTTCAAACAA+AGG + chr1_3:26736279-26736298 None:intergenic 20.0%
!! TGATATAATAACAAAAATGC+TGG + chr1_3:26736441-26736460 None:intergenic 20.0%
!! CAATATAATAATGGCAATAA+TGG - chr1_3:26736635-26736654 Msa0112250:intron 20.0%
!! CTGGAATTAATTTCATTTAT+TGG - chr1_3:26736677-26736696 Msa0112250:intron 20.0%
!! AATTGAGAAATAATCATAAC+AGG + chr1_3:26736712-26736731 None:intergenic 20.0%
!! TTTGTTTAAATCACTATTCA+AGG + chr1_3:26736932-26736951 None:intergenic 20.0%
!! TGATTTAAACAAATTTACTC+CGG - chr1_3:26736939-26736958 Msa0112250:CDS 20.0%
!! AAAGAGTTAACCAAATCTTT+TGG - chr1_3:26720432-26720451 Msa0112250:three_prime_UTR 25.0%
!!! TGAAGGTAAAGGTTTTTTAA+TGG - chr1_3:26720535-26720554 Msa0112250:CDS 25.0%
!!! GTTTCTCATAGTTATTTTGT+AGG - chr1_3:26720560-26720579 Msa0112250:intron 25.0%
! ATTCAATATAGTTCATATGG+TGG + chr1_3:26720706-26720725 None:intergenic 25.0%
! TGCATTCAATATAGTTCATA+TGG + chr1_3:26720709-26720728 None:intergenic 25.0%
!! GAAAAGAATCATTTTATGGT+AGG - chr1_3:26720753-26720772 Msa0112250:intron 25.0%
!!! TAACCATGTATTTTAGCTTT+TGG - chr1_3:26720984-26721003 Msa0112250:intron 25.0%
!! ATGATTGTGATTTCATTTTC+AGG - chr1_3:26721074-26721093 Msa0112250:CDS 25.0%
! AATGGATACAAGAATATAGA+AGG + chr1_3:26721235-26721254 None:intergenic 25.0%
! CCAAAATGGATATTTACTAT+TGG + chr1_3:26721319-26721338 None:intergenic 25.0%
!! CCAATAGTAAATATCCATTT+TGG - chr1_3:26721316-26721335 Msa0112250:CDS 25.0%
!!! TTTGATGATTATTTTGCCAT+TGG - chr1_3:26721426-26721445 Msa0112250:intron 25.0%
!! TTCATTTTATTCACATCCAA+TGG + chr1_3:26721445-26721464 None:intergenic 25.0%
!!! ATGAACGATTTTTGTTTTGT+TGG - chr1_3:26721460-26721479 Msa0112250:intron 25.0%
! TATCAAGATCTAATTGTAAG+GGG + chr1_3:26721580-26721599 None:intergenic 25.0%
! CTATCAAGATCTAATTGTAA+GGG + chr1_3:26721581-26721600 None:intergenic 25.0%
! CTTACAATTAGATCTTGATA+GGG - chr1_3:26721580-26721599 Msa0112250:intron 25.0%
! TTTAATGCTTGTTTGAATTG+GGG - chr1_3:26721809-26721828 Msa0112250:intron 25.0%
!! GTTCCTTTTTATGTTTCAAA+AGG - chr1_3:26722078-26722097 Msa0112250:intron 25.0%
! AATAGATAATGATACGGATA+TGG + chr1_3:26722134-26722153 None:intergenic 25.0%
! GAAAGTTATTATTGGACTAT+GGG + chr1_3:26722216-26722235 None:intergenic 25.0%
! AGAAAGTTATTATTGGACTA+TGG + chr1_3:26722217-26722236 None:intergenic 25.0%
! GACTGAAAGAAAGTTATTAT+TGG + chr1_3:26722224-26722243 None:intergenic 25.0%
! TTGACAGCAAATTCAATTAA+TGG - chr1_3:26722298-26722317 Msa0112250:intron 25.0%
! TGACAGCAAATTCAATTAAT+GGG - chr1_3:26722299-26722318 Msa0112250:intron 25.0%
!!! AATTCAAGGTTAGTTTAGAA+GGG + chr1_3:26722423-26722442 None:intergenic 25.0%
!!! AAATTCAAGGTTAGTTTAGA+AGG + chr1_3:26722424-26722443 None:intergenic 25.0%
!!! AACCAACAACTTTAAGTTTT+AGG - chr1_3:26722549-26722568 Msa0112250:intron 25.0%
! ATCCTAAAACTTAAAGTTGT+TGG + chr1_3:26722554-26722573 None:intergenic 25.0%
!!! ACTTTAAGTTTTAGGATAGT+TGG - chr1_3:26722557-26722576 Msa0112250:intron 25.0%
!! TGCAATCCTAATATATTTTC+CGG + chr1_3:26722977-26722996 None:intergenic 25.0%
! TGATGCAATAAAGAATACTT+GGG - chr1_3:26723038-26723057 Msa0112250:intron 25.0%
!! AAAATATTGTTTTCGCTTCT+AGG - chr1_3:26723090-26723109 Msa0112250:intron 25.0%
! TAAAGTTATCCGATACAAAT+TGG + chr1_3:26723119-26723138 None:intergenic 25.0%
!!! ATAATAAGTGGATTCAGTTT+TGG + chr1_3:26723172-26723191 None:intergenic 25.0%
! AACAAACAATGAGCATTTAT+TGG + chr1_3:26723249-26723268 None:intergenic 25.0%
! TTTAAAAACATTCCTTAGAC+TGG + chr1_3:26723359-26723378 None:intergenic 25.0%
! AATCAGTTATCTCACTATAT+AGG + chr1_3:26723449-26723468 None:intergenic 25.0%
! ATTCAGTCACATATTGAATA+TGG - chr1_3:26723690-26723709 Msa0112250:intron 25.0%
! TAACAAAAGAAGATACAAAC+AGG - chr1_3:26724050-26724069 Msa0112250:intron 25.0%
! AACAAAAGAAGATACAAACA+GGG - chr1_3:26724051-26724070 Msa0112250:intron 25.0%
! ATATTCTGTTTGCATTTGTT+TGG - chr1_3:26724109-26724128 Msa0112250:intron 25.0%
!! GGATAAGATAATTTGTAATG+TGG - chr1_3:26724328-26724347 Msa0112250:intron 25.0%
! AGAAAAAAAATAATGACAGC+TGG + chr1_3:26724572-26724591 None:intergenic 25.0%
!! ATTGATAATAAGAGTTCGTA+AGG - chr1_3:26724611-26724630 Msa0112250:intron 25.0%
! TGGAAAAAAAAAAATCGTTC+TGG - chr1_3:26724985-26725004 Msa0112250:intron 25.0%
! GGAAAAAAAAAAATCGTTCT+GGG - chr1_3:26724986-26725005 Msa0112250:intron 25.0%
! GAAAAAAAAAAATCGTTCTG+GGG - chr1_3:26724987-26725006 Msa0112250:intron 25.0%
! TCAACTTTGCAAATCATAAT+AGG - chr1_3:26725234-26725253 Msa0112250:intron 25.0%
! TGCAAATCATAATAGGATTT+AGG - chr1_3:26725241-26725260 Msa0112250:intron 25.0%
! AGTGTTTATTCATGAAAGAA+GGG + chr1_3:26725379-26725398 None:intergenic 25.0%
! TAGTGTTTATTCATGAAAGA+AGG + chr1_3:26725380-26725399 None:intergenic 25.0%
! AAATAGATCAACAATACCAA+AGG + chr1_3:26725440-26725459 None:intergenic 25.0%
! TTTGGTATTGTTGATCTATT+TGG - chr1_3:26725439-26725458 Msa0112250:intron 25.0%
! TACCAAAAAAATAAACTACC+AGG + chr1_3:26725914-26725933 None:intergenic 25.0%
! CTAAATCTCAATAAACTATC+AGG + chr1_3:26725944-26725963 None:intergenic 25.0%
!!! GTTACTATTTTAAAGTGTCT+GGG + chr1_3:26725986-26726005 None:intergenic 25.0%
!!! AGTTACTATTTTAAAGTGTC+TGG + chr1_3:26725987-26726006 None:intergenic 25.0%
!!! AGACACTTTAAAATAGTAAC+TGG - chr1_3:26725986-26726005 Msa0112250:CDS 25.0%
!!! GACACTTTAAAATAGTAACT+GGG - chr1_3:26725987-26726006 Msa0112250:CDS 25.0%
! CTCTGTATTTATGATAGAAT+TGG + chr1_3:26726164-26726183 None:intergenic 25.0%
! TATTGAAAGTAGGACTTATT+AGG + chr1_3:26726243-26726262 None:intergenic 25.0%
! AAACTGTATAGGTATATGTT+AGG + chr1_3:26726403-26726422 None:intergenic 25.0%
! ATTAACCATGGAATCTTTAT+AGG - chr1_3:26726445-26726464 Msa0112250:intron 25.0%
!! TTTTTCCTATAAAGATTCCA+TGG + chr1_3:26726453-26726472 None:intergenic 25.0%
! TAAGTTACTTCTATAGTCAA+AGG - chr1_3:26726500-26726519 Msa0112250:CDS 25.0%
! AAGTTACTTCTATAGTCAAA+GGG - chr1_3:26726501-26726520 Msa0112250:CDS 25.0%
! CTCTATAAAAGAAAAAACTC+TGG + chr1_3:26726710-26726729 None:intergenic 25.0%
! TAATCACGTTCATATGAAAT+AGG - chr1_3:26727100-26727119 Msa0112250:intron 25.0%
!!! TATGAAATAGGTTTTTGACT+AGG - chr1_3:26727112-26727131 Msa0112250:intron 25.0%
!!! CAGTTATTTTTTAAGGTGTT+TGG + chr1_3:26727258-26727277 None:intergenic 25.0%
!! GGCTTATGAACAATTTATTT+TGG + chr1_3:26727294-26727313 None:intergenic 25.0%
! GAAGAATATGAATTCATTTC+AGG + chr1_3:26727469-26727488 None:intergenic 25.0%
! TATGTCACAAATAGTTATCA+AGG + chr1_3:26727598-26727617 None:intergenic 25.0%
! GAAGTTAATAAGGCAAATAA+TGG - chr1_3:26727651-26727670 Msa0112250:intron 25.0%
!!! TGGAGAGTTAAAGTTATTTT+TGG - chr1_3:26727671-26727690 Msa0112250:intron 25.0%
!!! ATATTTTCTTTTGTTTCGTC+AGG - chr1_3:26728135-26728154 Msa0112250:intron 25.0%
! ATTGAAGAAGCTAAATGAAA+TGG - chr1_3:26728205-26728224 Msa0112250:intron 25.0%
! TAATTAACGTAATTGTTGTG+TGG - chr1_3:26728917-26728936 Msa0112250:CDS 25.0%
! AATATACAAGTGATTGGAAA+AGG - chr1_3:26729013-26729032 Msa0112250:intron 25.0%
! ATATACAAGTGATTGGAAAA+GGG - chr1_3:26729014-26729033 Msa0112250:intron 25.0%
! TCTAAACTTTCTCATGTATT+GGG - chr1_3:26729131-26729150 Msa0112250:intron 25.0%
! GTAATTACAATAGTAGTTGT+CGG - chr1_3:26729248-26729267 Msa0112250:intron 25.0%
! TTCATGGTTAAGTTTATAGT+AGG + chr1_3:26729342-26729361 None:intergenic 25.0%
! CTTGAGAAACAAATAAATAC+TGG + chr1_3:26729495-26729514 None:intergenic 25.0%
!! CAGTATTTATTTGTTTCTCA+AGG - chr1_3:26729493-26729512 Msa0112250:intron 25.0%
! GTATGTTATAGTCAAGTTAT+GGG + chr1_3:26729531-26729550 None:intergenic 25.0%
! CCGAATCATAATATTCAAAA+GGG + chr1_3:26729559-26729578 None:intergenic 25.0%
!! CCCTTTTGAATATTATGATT+CGG - chr1_3:26729556-26729575 Msa0112250:intron 25.0%
! ACCGAATCATAATATTCAAA+AGG + chr1_3:26729560-26729579 None:intergenic 25.0%
!!! TTTTGAATATTATGATTCGG+TGG - chr1_3:26729559-26729578 Msa0112250:intron 25.0%
! CAATACAATCTATTTCCAAT+GGG - chr1_3:26729593-26729612 Msa0112250:CDS 25.0%
! AATACAATCTATTTCCAATG+GGG - chr1_3:26729594-26729613 Msa0112250:CDS 25.0%
! TTATGATATACGTCACAATA+AGG + chr1_3:26729647-26729666 None:intergenic 25.0%
! AATTACAATGTCACTAAGAT+TGG - chr1_3:26729909-26729928 Msa0112250:intron 25.0%
!! TGTTACAAAAAGCTTTGATT+AGG - chr1_3:26730031-26730050 Msa0112250:intron 25.0%
! CGAAGACAGAAATTATTATT+TGG + chr1_3:26730321-26730340 None:intergenic 25.0%
! TCTTTACAGATTGTATTAAC+TGG - chr1_3:26730602-26730621 Msa0112250:intron 25.0%
! ATGATGTTTAATCATTGCAA+AGG + chr1_3:26730656-26730675 None:intergenic 25.0%
!! CTGAAAATAATCTTACGTTT+TGG - chr1_3:26730681-26730700 Msa0112250:intron 25.0%
! TGAAAAGGACTTCAAATATT+AGG + chr1_3:26730724-26730743 None:intergenic 25.0%
! TATTCTATACTATGAAGTAC+TGG - chr1_3:26731244-26731263 Msa0112250:intron 25.0%
!!! CATGATTAGACATGTTTTTT+TGG - chr1_3:26731539-26731558 Msa0112250:intron 25.0%
! TTTAGCACAATAACACAAAA+AGG + chr1_3:26731799-26731818 None:intergenic 25.0%
!!! ATATATTTTCCCTTTGAAAC+AGG - chr1_3:26731855-26731874 Msa0112250:intron 25.0%
! ATAAATCTACCTGTTTCAAA+GGG + chr1_3:26731867-26731886 None:intergenic 25.0%
! GAAATCATGTTTACTGATAA+TGG + chr1_3:26731999-26732018 None:intergenic 25.0%
! GAATTCAAAATCAAGTAAGA+TGG - chr1_3:26732445-26732464 Msa0112250:intron 25.0%
!!! TTATGTGCTTTTGTTTTCAT+TGG - chr1_3:26732734-26732753 Msa0112250:intron 25.0%
!!! TTTTCATTGGTTCTAAACAA+TGG - chr1_3:26732747-26732766 Msa0112250:intron 25.0%
! AGAATTTAGACTTGAGATAT+TGG - chr1_3:26732954-26732973 Msa0112250:CDS 25.0%
! TTTAATGTGACTGATGATTT+GGG + chr1_3:26733000-26733019 None:intergenic 25.0%
! AACCCTATATTAAACTTCTA+GGG + chr1_3:26733055-26733074 None:intergenic 25.0%
! AAACCCTATATTAAACTTCT+AGG + chr1_3:26733056-26733075 None:intergenic 25.0%
! AGAATTTAGACTTGAGATAT+TGG - chr1_3:26732954-26732973 Msa0112250:CDS 25.0%
! TTTAATGTGACTGATGATTT+GGG + chr1_3:26733000-26733019 None:intergenic 25.0%
! GTGTTAGATAATTGCTAATA+AGG - chr1_3:26733194-26733213 Msa0112250:CDS 25.0%
! ACTCTTTATAAACTCATATC+AGG + chr1_3:26733620-26733639 None:intergenic 25.0%
! TGATATGAGTTTATAAAGAG+TGG - chr1_3:26733619-26733638 Msa0112250:intron 25.0%
! TATCATGGATGACAATATTT+AGG - chr1_3:26733861-26733880 Msa0112250:intron 25.0%
! ATCATGGATGACAATATTTA+GGG - chr1_3:26733862-26733881 Msa0112250:intron 25.0%
! CTGTCTCATTTAGAAAAAAT+TGG - chr1_3:26734037-26734056 Msa0112250:intron 25.0%
! TAAACTCAAGAATAATGTGT+GGG + chr1_3:26734131-26734150 None:intergenic 25.0%
! ATAAACTCAAGAATAATGTG+TGG + chr1_3:26734132-26734151 None:intergenic 25.0%
! CAAATGTAATTTGGTTGAAA+AGG + chr1_3:26734413-26734432 None:intergenic 25.0%
! AGGTAGTAACAAATGTAATT+TGG + chr1_3:26734422-26734441 None:intergenic 25.0%
! AACTTTCAAATGTTATGTAC+TGG - chr1_3:26734446-26734465 Msa0112250:intron 25.0%
! ATATAAAATGAACCGAAAAG+TGG - chr1_3:26734723-26734742 Msa0112250:intron 25.0%
! TTGTAAGTTCAAATCTTAGT+GGG + chr1_3:26734850-26734869 None:intergenic 25.0%
! TTTGTAAGTTCAAATCTTAG+TGG + chr1_3:26734851-26734870 None:intergenic 25.0%
!! AGTGTATTTTCTAATTGTCT+CGG + chr1_3:26734975-26734994 None:intergenic 25.0%
! AGACAATTAGAAAATACACT+TGG - chr1_3:26734975-26734994 Msa0112250:intron 25.0%
! CACAACAGTTTATATAGATT+GGG - chr1_3:26735253-26735272 Msa0112250:intron 25.0%
! ACTTAATATGGTGATATTTG+GGG - chr1_3:26735379-26735398 Msa0112250:intron 25.0%
! TCACACTAATATATCAAACA+AGG + chr1_3:26735559-26735578 None:intergenic 25.0%
!!! TTTTATTTTCAGTGTGATAC+TGG - chr1_3:26735638-26735657 Msa0112250:CDS 25.0%
!!! TTTATTTTCAGTGTGATACT+GGG - chr1_3:26735639-26735658 Msa0112250:CDS 25.0%
! TTGTTTCAATCTTGTATTTC+TGG - chr1_3:26735844-26735863 Msa0112250:intron 25.0%
! ATTCAGATATTATTTCCAGT+CGG - chr1_3:26735987-26736006 Msa0112250:intron 25.0%
! CTGATAATATATTACCTGAT+TGG + chr1_3:26736243-26736262 None:intergenic 25.0%
! CAATCAGGTAATATATTATC+AGG - chr1_3:26736241-26736260 Msa0112250:intron 25.0%
! TATTATACTTCAAACAAAGG+AGG + chr1_3:26736276-26736295 None:intergenic 25.0%
! ACATATGATTGTAATTTCAC+TGG - chr1_3:26736658-26736677 Msa0112250:intron 25.0%
!! CTCTAGTTGTAGATTTTTAT+TGG + chr1_3:26736762-26736781 None:intergenic 25.0%
!! TCATTCAGTACATAAGATTT+TGG - chr1_3:26737002-26737021 Msa0112250:intron 25.0%
!! CATTCAGTACATAAGATTTT+GGG - chr1_3:26737003-26737022 Msa0112250:intron 25.0%
! TCTATATATATGTTTCCTAC+AGG - chr1_3:26737149-26737168 Msa0112250:CDS 25.0%
! CTATATATATGTTTCCTACA+GGG - chr1_3:26737150-26737169 Msa0112250:CDS 25.0%
!!! CTTTTCACCATATTTTTTTG+AGG - chr1_3:26737200-26737219 Msa0112250:CDS 25.0%
! CTTTAAGCCTCAAAAAAATA+TGG + chr1_3:26737210-26737229 None:intergenic 25.0%
! CTTAAAGCTGTGTTAATTTA+AGG - chr1_3:26737223-26737242 Msa0112250:CDS 25.0%
! ATTTCTACTTTACTTGTCAA+TGG + chr1_3:26737347-26737366 None:intergenic 25.0%
! TGTGTTTCTGCAATATCAAA+AGG + chr1_3:26719965-26719984 None:intergenic 30.0%
CATGACTCAAAAAAAGAAAC+TGG - chr1_3:26720136-26720155 Msa0112250:three_prime_UTR 30.0%
AAAAAAGAAACTGGTTGTGT+CGG - chr1_3:26720145-26720164 Msa0112250:three_prime_UTR 30.0%
! TCACATTCCTTATTTCAGAA+AGG - chr1_3:26720222-26720241 Msa0112250:three_prime_UTR 30.0%
!! TGACTAACCTTTCTGAAATA+AGG + chr1_3:26720232-26720251 None:intergenic 30.0%
! AGTTAACCAAATCTTTTGGA+TGG - chr1_3:26720436-26720455 Msa0112250:three_prime_UTR 30.0%
! GTTAACCAAATCTTTTGGAT+GGG - chr1_3:26720437-26720456 Msa0112250:three_prime_UTR 30.0%
AAAGCTAGAAGACAAAATGA+AGG - chr1_3:26720518-26720537 Msa0112250:CDS 30.0%
AGAAGACAAAATGAAGGTAA+AGG - chr1_3:26720524-26720543 Msa0112250:CDS 30.0%
GTCTCGAAGATTATTTATTG+AGG - chr1_3:26720625-26720644 Msa0112250:intron 30.0%
ACTATACAGAAGTTGTTTGA+AGG - chr1_3:26720680-26720699 Msa0112250:intron 30.0%
CTATATTGAATGCATGAATG+TGG - chr1_3:26720715-26720734 Msa0112250:intron 30.0%
GAAGAATGATGTGTAAACAA+TGG + chr1_3:26720799-26720818 None:intergenic 30.0%
! TGCTTCTTTTGATAAGTATG+TGG - chr1_3:26720895-26720914 Msa0112250:intron 30.0%
CAACCAAAAGCTAAAATACA+TGG + chr1_3:26720990-26721009 None:intergenic 30.0%
TTCTTCAGCTTCAGTTAAAA+CGG - chr1_3:26721136-26721155 Msa0112250:intron 30.0%
ACAAGAATATAGAAGGTGAA+GGG + chr1_3:26721228-26721247 None:intergenic 30.0%
TACAAGAATATAGAAGGTGA+AGG + chr1_3:26721229-26721248 None:intergenic 30.0%
GGTGAGAAACAAATATTACA+GGG + chr1_3:26721358-26721377 None:intergenic 30.0%
TGGTGAGAAACAAATATTAC+AGG + chr1_3:26721359-26721378 None:intergenic 30.0%
TCTGTTTGCAATCAAGTTAA+TGG + chr1_3:26721538-26721557 None:intergenic 30.0%
CCTATCAAGATCTAATTGTA+AGG + chr1_3:26721582-26721601 None:intergenic 30.0%
CCTTACAATTAGATCTTGAT+AGG - chr1_3:26721579-26721598 Msa0112250:intron 30.0%
TTAGATCTTGATAGGGATAA+TGG - chr1_3:26721587-26721606 Msa0112250:intron 30.0%
TAGATCTTGATAGGGATAAT+GGG - chr1_3:26721588-26721607 Msa0112250:intron 30.0%
AATACCTGTGAAGTGTATAA+AGG + chr1_3:26721652-26721671 None:intergenic 30.0%
TTAATGCTTGTTTGAATTGG+GGG - chr1_3:26721810-26721829 Msa0112250:intron 30.0%
AAATGGGTAGGTAGAAAATT+TGG - chr1_3:26721834-26721853 Msa0112250:intron 30.0%
CAATTAGCACAATAGAAACA+TGG - chr1_3:26721878-26721897 Msa0112250:intron 30.0%
TTAGAATGCTTTCCTCTTTA+AGG + chr1_3:26721924-26721943 None:intergenic 30.0%
TGAACCTATTGAAATAAGCA+TGG - chr1_3:26722026-26722045 Msa0112250:intron 30.0%
!!! CAGCCTTTTGAAACATAAAA+AGG + chr1_3:26722084-26722103 None:intergenic 30.0%
ATCCGTATCATTATCTATTG+TGG - chr1_3:26722135-26722154 Msa0112250:intron 30.0%
TCCGTATCATTATCTATTGT+GGG - chr1_3:26722136-26722155 Msa0112250:intron 30.0%
TCCCACAATAGATAATGATA+CGG + chr1_3:26722140-26722159 None:intergenic 30.0%
! AACTTTTAGCATGGTCTTTA+TGG - chr1_3:26722269-26722288 Msa0112250:intron 30.0%
!! TAATGGGTTTGTTTAGACTT+TGG - chr1_3:26722315-26722334 Msa0112250:intron 30.0%
AAGATTATGCCATTAAGCAA+GGG + chr1_3:26722366-26722385 None:intergenic 30.0%
!! ATTCAAGGTTAGTTTAGAAG+GGG + chr1_3:26722422-26722441 None:intergenic 30.0%
!! ATTGTGCTTTAAAGCCTAAA+TGG - chr1_3:26722473-26722492 Msa0112250:intron 30.0%
! TAGGATAGTTGGTTCTTAAT+TGG - chr1_3:26722568-26722587 Msa0112250:intron 30.0%
ACTAGACTATACTTCCTAAT+GGG + chr1_3:26722625-26722644 None:intergenic 30.0%
TTGATATTAGTTGAAGTCTC+TGG - chr1_3:26722650-26722669 Msa0112250:intron 30.0%
! AACCTAGTTACAGATTGTTT+TGG - chr1_3:26722686-26722705 Msa0112250:intron 30.0%
! TATATTAGCCTAAGGCTATA+AGG - chr1_3:26722905-26722924 Msa0112250:intron 30.0%
GTGATGCAATAAAGAATACT+TGG - chr1_3:26723037-26723056 Msa0112250:intron 30.0%
AAGAAACTTACAATAGCTTG+CGG - chr1_3:26723220-26723239 Msa0112250:intron 30.0%
! ATTGTTTGTTTGCAGTGTTT+TGG - chr1_3:26723259-26723278 Msa0112250:intron 30.0%
! ATTAACAGCAATTTTGCTCT+TGG + chr1_3:26723473-26723492 None:intergenic 30.0%
! CTGTTAATGTGTTCAGTTTT+GGG - chr1_3:26723485-26723504 Msa0112250:intron 30.0%
TTAAATCTCTTGCCAAAACT+GGG - chr1_3:26723647-26723666 Msa0112250:intron 30.0%
!!! ATGATTGGTTTTACTTTGAC+CGG - chr1_3:26723726-26723745 Msa0112250:intron 30.0%
AAAAAGGATATGGAACTTTG+TGG + chr1_3:26723763-26723782 None:intergenic 30.0%
TACCAAATAATCCAGATACA+AGG + chr1_3:26723820-26723839 None:intergenic 30.0%
AATTGTCAATTCATGCTACA+AGG + chr1_3:26723897-26723916 None:intergenic 30.0%
AAAGTCATGACCAAAAAACA+TGG + chr1_3:26723971-26723990 None:intergenic 30.0%
!! AATGTAACTTGTGTGTTTTC+AGG - chr1_3:26724005-26724024 Msa0112250:intron 30.0%
GGTTTAAATTCGATGATGAA+CGG - chr1_3:26724026-26724045 Msa0112250:intron 30.0%
GTTTAAATTCGATGATGAAC+GGG - chr1_3:26724027-26724046 Msa0112250:intron 30.0%
AATTTGTAATGTGGATGAGA+AGG - chr1_3:26724337-26724356 Msa0112250:intron 30.0%
AAGGTTAAAGAAAGAACAAG+AGG - chr1_3:26724467-26724486 Msa0112250:intron 30.0%
TCATTTGTACACCATTGTAA+AGG - chr1_3:26724524-26724543 Msa0112250:intron 30.0%
AAAATAATGACAGCTGGAAA+AGG + chr1_3:26724566-26724585 None:intergenic 30.0%
GGATATATTCTTTGATCTTG+TGG - chr1_3:26724710-26724729 Msa0112250:intron 30.0%
CATACCTTGAAAATGGTAAA+TGG + chr1_3:26724777-26724796 None:intergenic 30.0%
TTGAGATCAAAGCCAAATTA+AGG + chr1_3:26724837-26724856 None:intergenic 30.0%
CTAGTTAAACAGATGACAAA+AGG + chr1_3:26724954-26724973 None:intergenic 30.0%
TTTAACTAGAACTGAAAGAG+TGG - chr1_3:26724965-26724984 Msa0112250:intron 30.0%
TAACATAATTCACCAAATGC+AGG + chr1_3:26725161-26725180 None:intergenic 30.0%
AACACAGAAAATCAAAGAGA+TGG + chr1_3:26725210-26725229 None:intergenic 30.0%
ATTGAAGTTTGTCCAAACAT+GGG - chr1_3:26725293-26725312 Msa0112250:intron 30.0%
AAAGGATGAAGAAGTAATCA+AGG + chr1_3:26725422-26725441 None:intergenic 30.0%
TTGATTACTTCTTCATCCTT+TGG - chr1_3:26725421-26725440 Msa0112250:intron 30.0%
TTATTTCATAAATAGCAGGG+TGG - chr1_3:26725696-26725715 Msa0112250:intron 30.0%
TGACCGTATTGTAAAATTGT+AGG - chr1_3:26725886-26725905 Msa0112250:intron 30.0%
GACCGTATTGTAAAATTGTA+GGG - chr1_3:26725887-26725906 Msa0112250:intron 30.0%
! GTCCCTACAATTTTACAATA+CGG + chr1_3:26725892-26725911 None:intergenic 30.0%
!!! GACCTGGTAGTTTATTTTTT+TGG - chr1_3:26725909-26725928 Msa0112250:intron 30.0%
TATTTAGCCATTGTACCATT+AGG - chr1_3:26726305-26726324 Msa0112250:CDS 30.0%
ATTAGTGAAGTATATAGAGG+AGG + chr1_3:26726342-26726361 None:intergenic 30.0%
GCAATTAGTGAAGTATATAG+AGG + chr1_3:26726345-26726364 None:intergenic 30.0%
CTATATACTTCACTAATTGC+AGG - chr1_3:26726345-26726364 Msa0112250:CDS 30.0%
AATGCATGATCAATTAACCA+TGG - chr1_3:26726433-26726452 Msa0112250:intron 30.0%
CTATAGTCAAAGGGAAAATA+TGG - chr1_3:26726510-26726529 Msa0112250:intron 30.0%
AAAAGAAAAAACTCTGGCAT+GGG + chr1_3:26726704-26726723 None:intergenic 30.0%
TAAAAGAAAAAACTCTGGCA+TGG + chr1_3:26726705-26726724 None:intergenic 30.0%
! AGAAGCCTATTTAGCTTAAA+AGG - chr1_3:26726748-26726767 Msa0112250:intron 30.0%
! TAAAACCTTTTAGTCCTAAC+AGG - chr1_3:26726791-26726810 Msa0112250:intron 30.0%
TGCCGTGTTAAATATCAAAA+TGG - chr1_3:26727010-26727029 Msa0112250:intron 30.0%
GCCGTGTTAAATATCAAAAT+GGG - chr1_3:26727011-26727030 Msa0112250:intron 30.0%
!! CCCCATTTTGATATTTAACA+CGG + chr1_3:26727015-26727034 None:intergenic 30.0%
CCGTGTTAAATATCAAAATG+GGG - chr1_3:26727012-26727031 Msa0112250:intron 30.0%
!!! TTTTTAAGGTGTTTGGGATA+GGG + chr1_3:26727251-26727270 None:intergenic 30.0%
!!! TTTTTTAAGGTGTTTGGGAT+AGG + chr1_3:26727252-26727271 None:intergenic 30.0%
!!! GTTAAGACATGTTTTTGGAT+TGG + chr1_3:26727315-26727334 None:intergenic 30.0%
!!! ATTTTAGGTTGGACAGTTAA+GGG - chr1_3:26727629-26727648 Msa0112250:intron 30.0%
ACAGTTAAGGGAAGTTAATA+AGG - chr1_3:26727641-26727660 Msa0112250:intron 30.0%
AATAGCAACAACTACACTAT+TGG + chr1_3:26727744-26727763 None:intergenic 30.0%
TATGCATTGCACAATGAATT+AGG - chr1_3:26727816-26727835 Msa0112250:intron 30.0%
! TTTTCATTTGCAGATTACTG+CGG - chr1_3:26727961-26727980 Msa0112250:intron 30.0%
TTATATGAAGGATGTTTGGT+TGG + chr1_3:26727987-26728006 None:intergenic 30.0%
AGCTTCTTCAATATATCTAC+TGG + chr1_3:26728197-26728216 None:intergenic 30.0%
AACAGATCAATTTCTTCATC+CGG + chr1_3:26728242-26728261 None:intergenic 30.0%
TGAAGAAATTGATCTGTTTG+AGG - chr1_3:26728244-26728263 Msa0112250:intron 30.0%
TATTTCCTGAATATGCACAA+CGG + chr1_3:26728344-26728363 None:intergenic 30.0%
!! GATTGTAACTTTTGTTTGCA+TGG - chr1_3:26728644-26728663 Msa0112250:intron 30.0%
TGCACATATTCAAAGAATGA+AGG + chr1_3:26728766-26728785 None:intergenic 30.0%
TGAGAAAGTTTAGAGAAAAG+AGG + chr1_3:26729125-26729144 None:intergenic 30.0%
CTCTAAACTTTCTCATGTAT+TGG - chr1_3:26729130-26729149 Msa0112250:intron 30.0%
CTAAACTTTCTCATGTATTG+GGG - chr1_3:26729132-26729151 Msa0112250:intron 30.0%
ACTTTCACACTTGATTACTT+TGG - chr1_3:26729202-26729221 Msa0112250:intron 30.0%
AATAAATGAATGAGTACTCC+TGG + chr1_3:26729375-26729394 None:intergenic 30.0%
GGTATGTTATAGTCAAGTTA+TGG + chr1_3:26729532-26729551 None:intergenic 30.0%
CATAATATTCAAAAGGGTCT+GGG + chr1_3:26729553-26729572 None:intergenic 30.0%
TCATAATATTCAAAAGGGTC+TGG + chr1_3:26729554-26729573 None:intergenic 30.0%
GCAATACAATCTATTTCCAA+TGG - chr1_3:26729592-26729611 Msa0112250:CDS 30.0%
TTTCCTATGATCATTTCTTC+AGG - chr1_3:26729618-26729637 Msa0112250:CDS 30.0%
AAACCTGAAGAAATGATCAT+AGG + chr1_3:26729624-26729643 None:intergenic 30.0%
ATTGTGACGTATATCATAAG+TGG - chr1_3:26729648-26729667 Msa0112250:intron 30.0%
AATTCTTGTTCATCTGATAC+TGG + chr1_3:26729678-26729697 None:intergenic 30.0%
TATTTATGAACGACAATTCC+TGG - chr1_3:26729699-26729718 Msa0112250:intron 30.0%
AACAGAACATTACACATATC+CGG - chr1_3:26729780-26729799 Msa0112250:intron 30.0%
! TAGGATGTGTTTCTATTTAC+CGG + chr1_3:26729802-26729821 None:intergenic 30.0%
TCCATATAAAACCAAGTCTT+TGG - chr1_3:26729854-26729873 Msa0112250:intron 30.0%
!!! TCCAAAGACTTGGTTTTATA+TGG + chr1_3:26729858-26729877 None:intergenic 30.0%
ATAAATTGTGGAGAGTTGAA+TGG - chr1_3:26729935-26729954 Msa0112250:intron 30.0%
TTTGATTAGGATTGAAAGAG+AGG - chr1_3:26730044-26730063 Msa0112250:intron 30.0%
!!! GTGTTTTTTGACAGAATTAC+AGG - chr1_3:26730118-26730137 Msa0112250:intron 30.0%
CATTATGAATCACAAGTGAA+AGG + chr1_3:26730385-26730404 None:intergenic 30.0%
CTTTCACTTGTGATTCATAA+TGG - chr1_3:26730383-26730402 Msa0112250:intron 30.0%
ACAATCAATCTAGGAAGTAA+AGG + chr1_3:26730440-26730459 None:intergenic 30.0%
GGAGTAATAACAATCAATCT+AGG + chr1_3:26730449-26730468 None:intergenic 30.0%
ATGCTTATTTAGTGATCACT+AGG + chr1_3:26730492-26730511 None:intergenic 30.0%
TCAAGCCCTTCTATTTATAA+TGG + chr1_3:26730535-26730554 None:intergenic 30.0%
ATCGTTTAAACCAAGATGTT+GGG + chr1_3:26730972-26730991 None:intergenic 30.0%
! GATGTAAGTCTGATTTTAGA+AGG + chr1_3:26730995-26731014 None:intergenic 30.0%
!!! GTTTTTAGGTTTTGCAATTC+CGG + chr1_3:26731281-26731300 None:intergenic 30.0%
TAATTATCATCACCTGAACA+GGG + chr1_3:26731419-26731438 None:intergenic 30.0%
TCATATATTACAGTCAGCTA+TGG + chr1_3:26731659-26731678 None:intergenic 30.0%
! CATTTTCTTATTAAGCGTAG+TGG + chr1_3:26731765-26731784 None:intergenic 30.0%
GATAAATCTACCTGTTTCAA+AGG + chr1_3:26731868-26731887 None:intergenic 30.0%
AGGAAAAATGTCTATTCATG+CGG - chr1_3:26732055-26732074 Msa0112250:intron 30.0%
TGCTTTAATTAATAACCGTC+AGG - chr1_3:26732286-26732305 Msa0112250:intron 30.0%
GCTTTAATTAATAACCGTCA+GGG - chr1_3:26732287-26732306 Msa0112250:intron 30.0%
TGATAGGTATATGGGTATTA+TGG - chr1_3:26732415-26732434 Msa0112250:intron 30.0%
GATAGGTATATGGGTATTAT+GGG - chr1_3:26732416-26732435 Msa0112250:intron 30.0%
ATAGGTATATGGGTATTATG+GGG - chr1_3:26732417-26732436 Msa0112250:intron 30.0%
ATGACAAGTATTTAAGCACT+TGG + chr1_3:26732542-26732561 None:intergenic 30.0%
GAGTTATAGATGTAACAACT+AGG + chr1_3:26732688-26732707 None:intergenic 30.0%
ATATTGGAAATGACAGATGA+TGG - chr1_3:26732970-26732989 Msa0112250:CDS 30.0%
GTTTAATGTGACTGATGATT+TGG + chr1_3:26733001-26733020 None:intergenic 30.0%
AAAAGGGAAGTGAATGAATA+AGG + chr1_3:26733023-26733042 None:intergenic 30.0%
ACACCCTAGAAGTTTAATAT+AGG - chr1_3:26733049-26733068 Msa0112250:intron 30.0%
CACCCTAGAAGTTTAATATA+GGG - chr1_3:26733050-26733069 Msa0112250:intron 30.0%
ATATTGGAAATGACAGATGA+TGG - chr1_3:26732970-26732989 Msa0112250:CDS 30.0%
GTTTAATGTGACTGATGATT+TGG + chr1_3:26733001-26733020 None:intergenic 30.0%
AAAAGGGAAGTGAATGAATA+AGG + chr1_3:26733023-26733042 None:intergenic 30.0%
ACACCCTAGAAGTTTAATAT+AGG - chr1_3:26733049-26733068 Msa0112250:intron 30.0%
CACCCTAGAAGTTTAATATA+GGG - chr1_3:26733050-26733069 Msa0112250:intron 30.0%
CACCCTATATTAAACTTCTA+GGG + chr1_3:26733177-26733196 None:intergenic 30.0%
ACACCCTATATTAAACTTCT+AGG + chr1_3:26733178-26733197 None:intergenic 30.0%
ATAACTCATCCTTACAAAAC+TGG + chr1_3:26733454-26733473 None:intergenic 30.0%
GATATTAGAGCCTATGAATT+CGG - chr1_3:26733496-26733515 Msa0112250:intron 30.0%
ATATTAGAGCCTATGAATTC+GGG - chr1_3:26733497-26733516 Msa0112250:intron 30.0%
TGTTAAATACTGTACTGCTT+TGG - chr1_3:26733801-26733820 Msa0112250:intron 30.0%
! ATGACAATATTTAGGGTGAA+GGG - chr1_3:26733869-26733888 Msa0112250:intron 30.0%
AAACTCAAGAATAATGTGTG+GGG + chr1_3:26734130-26734149 None:intergenic 30.0%
TTTCGAGAAGAATAATGTGT+GGG + chr1_3:26734191-26734210 None:intergenic 30.0%
ATTTCGAGAAGAATAATGTG+TGG + chr1_3:26734192-26734211 None:intergenic 30.0%
AATCAGATGGTAAGACTAAA+TGG - chr1_3:26734334-26734353 Msa0112250:intron 30.0%
TTTCAAATGTTATGTACTGG+TGG - chr1_3:26734449-26734468 Msa0112250:intron 30.0%
TGTAAGTTCAAATCTTAGTG+GGG + chr1_3:26734849-26734868 None:intergenic 30.0%
TATGCTAGTATAGTTTAGCT+TGG - chr1_3:26734873-26734892 Msa0112250:intron 30.0%
AACAGTCATTTGAACAACAA+TGG - chr1_3:26734934-26734953 Msa0112250:intron 30.0%
TATAATTCAACCAATCGTCA+AGG + chr1_3:26735065-26735084 None:intergenic 30.0%
! AATCCGGAAATTTTATGTTG+TGG + chr1_3:26735170-26735189 None:intergenic 30.0%
GCACAACAGTTTATATAGAT+TGG - chr1_3:26735252-26735271 Msa0112250:intron 30.0%
TTGGGGCAAAAATTAAGAAA+AGG - chr1_3:26735396-26735415 Msa0112250:intron 30.0%
ATAAAAATTTGAGCGTGTTG+AGG - chr1_3:26735464-26735483 Msa0112250:intron 30.0%
! ATTTGAGCTCAAGTGAATTT+TGG - chr1_3:26735605-26735624 Msa0112250:intron 30.0%
!!! TCAAGTGAATTTTGGAACTT+GGG - chr1_3:26735613-26735632 Msa0112250:intron 30.0%
! TTATTTTCAGTGTGATACTG+GGG - chr1_3:26735640-26735659 Msa0112250:CDS 30.0%
ATTGTTTGGTTGTTTAGAGA+AGG - chr1_3:26736144-26736163 Msa0112250:CDS 30.0%
TTGTTTGGTTGTTTAGAGAA+GGG - chr1_3:26736145-26736164 Msa0112250:CDS 30.0%
! TTGGCTGTATATGATCTTTT+TGG + chr1_3:26736224-26736243 None:intergenic 30.0%
AACTTCTGTTCTCAACTAAT+TGG - chr1_3:26736536-26736555 Msa0112250:CDS 30.0%
AAAATAGAGCAGCCATTATT+AGG - chr1_3:26736559-26736578 Msa0112250:CDS 30.0%
CCAATTATTGTGCCTAATAA+TGG + chr1_3:26736574-26736593 None:intergenic 30.0%
CCATTATTAGGCACAATAAT+TGG - chr1_3:26736571-26736590 Msa0112250:CDS 30.0%
!!! TGTGTTTTAGTCTATACACT+TGG - chr1_3:26736598-26736617 Msa0112250:CDS 30.0%
!!! GTGTTTTAGTCTATACACTT+GGG - chr1_3:26736599-26736618 Msa0112250:CDS 30.0%
!!! TGTTTTAGTCTATACACTTG+GGG - chr1_3:26736600-26736619 Msa0112250:CDS 30.0%
AATCTTATGTACTGAATGAC+AGG + chr1_3:26737001-26737020 None:intergenic 30.0%
!!! AGTACATAAGATTTTGGGTT+GGG - chr1_3:26737008-26737027 Msa0112250:intron 30.0%
!! GGGTTTTGTATAGAAAGTAT+AGG - chr1_3:26737028-26737047 Msa0112250:intron 30.0%
! TGTATAGAAAGTATAGGCAT+AGG - chr1_3:26737034-26737053 Msa0112250:intron 30.0%
GAATTGTATGATCCTAGTAG+AGG - chr1_3:26720043-26720062 Msa0112250:three_prime_UTR 35.0%
! TTTCAGAAAGGTTAGTCAGT+AGG - chr1_3:26720234-26720253 Msa0112250:three_prime_UTR 35.0%
! TTCAGAAAGGTTAGTCAGTA+GGG - chr1_3:26720235-26720254 Msa0112250:three_prime_UTR 35.0%
ACTGAAAATGATATGCCATC+TGG - chr1_3:26720342-26720361 Msa0112250:three_prime_UTR 35.0%
CTGAAAATGATATGCCATCT+GGG - chr1_3:26720343-26720362 Msa0112250:three_prime_UTR 35.0%
TGTATCCCATCCAAAAGATT+TGG + chr1_3:26720445-26720464 None:intergenic 35.0%
ATGATGTCCAAGAACTTAAC+AGG - chr1_3:26720484-26720503 Msa0112250:three_prime_UTR 35.0%
TGATGTCCAAGAACTTAACA+GGG - chr1_3:26720485-26720504 Msa0112250:three_prime_UTR 35.0%
!!! GGTAGGTATTTTTTGGCTTT+AGG - chr1_3:26720770-26720789 Msa0112250:intron 35.0%
!! TCATTTTCAGGAAGCAAGAA+AGG - chr1_3:26721086-26721105 Msa0112250:CDS 35.0%
!! CATTTTCAGGAAGCAAGAAA+GGG - chr1_3:26721087-26721106 Msa0112250:CDS 35.0%
TTTAACTGAAGCTGAAGAAC+AGG + chr1_3:26721135-26721154 None:intergenic 35.0%
GAACGTTAAAGCATGGATAA+AGG + chr1_3:26721297-26721316 None:intergenic 35.0%
ACTATTGGAACGTTAAAGCA+TGG + chr1_3:26721304-26721323 None:intergenic 35.0%
AAATTCACAGAACCCCAAAA+TGG + chr1_3:26721333-26721352 None:intergenic 35.0%
TCAGAGTAGGAAAAGAAGTT+TGG + chr1_3:26721379-26721398 None:intergenic 35.0%
TTAATGGCCATTACAGTTAC+AGG + chr1_3:26721522-26721541 None:intergenic 35.0%
TTGTTTGAATTGGGGGAAAA+TGG - chr1_3:26721817-26721836 Msa0112250:intron 35.0%
TGTTTGAATTGGGGGAAAAT+GGG - chr1_3:26721818-26721837 Msa0112250:intron 35.0%
GGTAGGTAGAAAATTTGGAA+TGG - chr1_3:26721839-26721858 Msa0112250:intron 35.0%
TAGCACAATAGAAACATGGA+TGG - chr1_3:26721882-26721901 Msa0112250:intron 35.0%
AGCACAATAGAAACATGGAT+GGG - chr1_3:26721883-26721902 Msa0112250:intron 35.0%
!! TGGAAGTTTTGTCCTTAAAG+AGG - chr1_3:26721909-26721928 Msa0112250:intron 35.0%
TAATAGGAGACAAAGAGAGT+AGG + chr1_3:26722003-26722022 None:intergenic 35.0%
TTGGCCATGCTTATTTCAAT+AGG + chr1_3:26722033-26722052 None:intergenic 35.0%
! TTATTGGACTATGGGTTGTA+GGG + chr1_3:26722208-26722227 None:intergenic 35.0%
! ATTATTGGACTATGGGTTGT+AGG + chr1_3:26722209-26722228 None:intergenic 35.0%
ACCATGCTAAAAGTTAAGTC+AGG + chr1_3:26722264-26722283 None:intergenic 35.0%
CAAGATTATGCCATTAAGCA+AGG + chr1_3:26722367-26722386 None:intergenic 35.0%
TGCTTAATGGCATAATCTTG+TGG - chr1_3:26722367-26722386 Msa0112250:intron 35.0%
GCTTAATGGCATAATCTTGT+GGG - chr1_3:26722368-26722387 Msa0112250:intron 35.0%
!! TTCAAGGTTAGTTTAGAAGG+GGG + chr1_3:26722421-26722440 None:intergenic 35.0%
TCATTGTGTGCTGAAATTCA+AGG + chr1_3:26722437-26722456 None:intergenic 35.0%
!! GCTTTAAAGCCTAAATGGTT+CGG - chr1_3:26722478-26722497 Msa0112250:intron 35.0%
!! CTTTAAAGCCTAAATGGTTC+GGG - chr1_3:26722479-26722498 Msa0112250:intron 35.0%
! TTTAAAGCCTAAATGGTTCG+GGG - chr1_3:26722480-26722499 Msa0112250:intron 35.0%
CTTAATTGGACTGACTATCA+TGG - chr1_3:26722582-26722601 Msa0112250:intron 35.0%
ACTGACTATCATGGATTCTA+CGG - chr1_3:26722591-26722610 Msa0112250:intron 35.0%
CACTAGACTATACTTCCTAA+TGG + chr1_3:26722626-26722645 None:intergenic 35.0%
TGCCAAAACAATCTGTAACT+AGG + chr1_3:26722691-26722710 None:intergenic 35.0%
! TGATTGTCTTCAAAGTATCC+TGG + chr1_3:26722791-26722810 None:intergenic 35.0%
TAGCTATTCCTTATAGCCTT+AGG + chr1_3:26722916-26722935 None:intergenic 35.0%
TAAACACAATGTGCTCATGA+AGG - chr1_3:26722934-26722953 Msa0112250:intron 35.0%
GGTAGTCCGGAAAATATATT+AGG - chr1_3:26722968-26722987 Msa0112250:CDS 35.0%
CAATAAAGAATACTTGGGTG+TGG - chr1_3:26723043-26723062 Msa0112250:intron 35.0%
TCTAGGTAGCCAATTTGTAT+CGG - chr1_3:26723107-26723126 Msa0112250:intron 35.0%
!! TACCACTGATTTGAAAGAGT+CGG + chr1_3:26723332-26723351 None:intergenic 35.0%
! GCTGTTAATGTGTTCAGTTT+TGG - chr1_3:26723484-26723503 Msa0112250:intron 35.0%
! CTGTTAATGTGCTCAGTTTT+GGG - chr1_3:26723529-26723548 Msa0112250:intron 35.0%
GTTAAATCTCTTGCCAAAAC+TGG - chr1_3:26723646-26723665 Msa0112250:intron 35.0%
!!! GGTCGCCATTTTTAAATGAT+TGG - chr1_3:26723711-26723730 Msa0112250:intron 35.0%
CTTTGTGGTTTAAGTCAATC+CGG + chr1_3:26723748-26723767 None:intergenic 35.0%
TGAAAAACTGTCCTTGTATC+TGG - chr1_3:26723806-26723825 Msa0112250:intron 35.0%
GTCCTTGTATCTGGATTATT+TGG - chr1_3:26723815-26723834 Msa0112250:intron 35.0%
AGTTACCTCTTACAAATCCT+GGG - chr1_3:26724231-26724250 Msa0112250:intron 35.0%
GGAAAAAGAGAAGAAGAAGA+AGG - chr1_3:26724488-26724507 Msa0112250:intron 35.0%
AGAGAAGAAGAAGAAGGAAA+AGG - chr1_3:26724494-26724513 Msa0112250:intron 35.0%
!! GATGCCATTTACCATTTTCA+AGG - chr1_3:26724770-26724789 Msa0112250:intron 35.0%
CATAGGTCATACCTTGAAAA+TGG + chr1_3:26724784-26724803 None:intergenic 35.0%
AACAACTACTCGTGGAAAAA+TGG + chr1_3:26724870-26724889 None:intergenic 35.0%
TAGTTGTTCATCTTTGCCAA+TGG - chr1_3:26724882-26724901 Msa0112250:intron 35.0%
GGATACAATCATCAGACATA+TGG + chr1_3:26724933-26724952 None:intergenic 35.0%
ATGAAATTGAGAGATCCTTC+TGG - chr1_3:26725033-26725052 Msa0112250:intron 35.0%
! TTCACTCATTCTTTTCCAGA+AGG + chr1_3:26725051-26725070 None:intergenic 35.0%
GATTGAAGTTTGTCCAAACA+TGG - chr1_3:26725292-26725311 Msa0112250:intron 35.0%
TTGAAGTTTGTCCAAACATG+GGG - chr1_3:26725294-26725313 Msa0112250:intron 35.0%
! CTGATAATGAAGCTTTGATC+AGG - chr1_3:26725513-26725532 Msa0112250:intron 35.0%
TTCAAAATCACACACTACCA+TGG + chr1_3:26725772-26725791 None:intergenic 35.0%
ATTGTAAAATTGTAGGGACC+TGG - chr1_3:26725893-26725912 Msa0112250:intron 35.0%
CTTCTATACTAATGAGAACC+TGG - chr1_3:26726084-26726103 Msa0112250:intron 35.0%
TGGATCAGCAATAAATTACC+AGG + chr1_3:26726105-26726124 None:intergenic 35.0%
GAAAGTAGGACTTATTAGGA+GGG + chr1_3:26726239-26726258 None:intergenic 35.0%
TGAAAGTAGGACTTATTAGG+AGG + chr1_3:26726240-26726259 None:intergenic 35.0%
AGAATGACCTAATGGTACAA+TGG + chr1_3:26726315-26726334 None:intergenic 35.0%
GAGGAATAAGAATGACCTAA+TGG + chr1_3:26726323-26726342 None:intergenic 35.0%
ATGTTAGGTGTCTATTAGCT+GGG + chr1_3:26726388-26726407 None:intergenic 35.0%
TATGTTAGGTGTCTATTAGC+TGG + chr1_3:26726389-26726408 None:intergenic 35.0%
TGTGGTATCAGAAACTGTAT+AGG + chr1_3:26726414-26726433 None:intergenic 35.0%
GGTTAATTGATCATGCATTG+TGG + chr1_3:26726432-26726451 None:intergenic 35.0%
GAAAAACGCTTATCACACAA+GGG - chr1_3:26726467-26726486 Msa0112250:intron 35.0%
AGTCAAAGGGAAAATATGGT+CGG - chr1_3:26726514-26726533 Msa0112250:intron 35.0%
!!! CTGTTTTAATAAGCTGATCC+TGG - chr1_3:26726545-26726564 Msa0112250:intron 35.0%
! CCTGACCTTTTAAGCTAAAT+AGG + chr1_3:26726756-26726775 None:intergenic 35.0%
! CCTATTTAGCTTAAAAGGTC+AGG - chr1_3:26726753-26726772 Msa0112250:intron 35.0%
!!! AGGTTTTATTTAACGGCATG+TGG + chr1_3:26726779-26726798 None:intergenic 35.0%
AATGGGGAGCTTAAAATCAT+TGG - chr1_3:26727028-26727047 Msa0112250:intron 35.0%
!!! GCTTTTTTGAAAGTCTGGTA+TGG + chr1_3:26727146-26727165 None:intergenic 35.0%
!!! GTCTAGCTTTTTTGAAAGTC+TGG + chr1_3:26727151-26727170 None:intergenic 35.0%
!!! TTTTAAGGTGTTTGGGATAG+GGG + chr1_3:26727250-26727269 None:intergenic 35.0%
! GACACGTTAAGACATGTTTT+TGG + chr1_3:26727320-26727339 None:intergenic 35.0%
AATTCATTTCAGGAGTTGAG+AGG + chr1_3:26727459-26727478 None:intergenic 35.0%
!!! CATTTTAGGTTGGACAGTTA+AGG - chr1_3:26727628-26727647 Msa0112250:intron 35.0%
! ATTTTTCCCTCCTTTTCAAC+TGG - chr1_3:26727767-26727786 Msa0112250:intron 35.0%
! TTTTTCCCTCCTTTTCAACT+GGG - chr1_3:26727768-26727787 Msa0112250:intron 35.0%
ATACTGATCCTACTTGCAAT+TGG + chr1_3:26727942-26727961 None:intergenic 35.0%
TATCATCGTGTTACAACATG+GGG + chr1_3:26728054-26728073 None:intergenic 35.0%
CTATCATCGTGTTACAACAT+GGG + chr1_3:26728055-26728074 None:intergenic 35.0%
ACTATCATCGTGTTACAACA+TGG + chr1_3:26728056-26728075 None:intergenic 35.0%
!! ACAATTTGACAGCACTGATT+AGG - chr1_3:26728085-26728104 Msa0112250:intron 35.0%
!! TTTTGTTTCGTCAGGTATGT+TGG - chr1_3:26728143-26728162 Msa0112250:intron 35.0%
TTTGTTTCGTCAGGTATGTT+GGG - chr1_3:26728144-26728163 Msa0112250:intron 35.0%
AAGAAGCTAAATGAAATGGC+TGG - chr1_3:26728209-26728228 Msa0112250:intron 35.0%
! ACATGTTCGCACATGATTTT+GGG + chr1_3:26728376-26728395 None:intergenic 35.0%
! AACATGTTCGCACATGATTT+TGG + chr1_3:26728377-26728396 None:intergenic 35.0%
TCAAAGAATGAAGGAACATC+TGG + chr1_3:26728757-26728776 None:intergenic 35.0%
GCATGAAGACATAGAAATAG+AGG + chr1_3:26728869-26728888 None:intergenic 35.0%
AAGAGGATAGAATAGTTGCA+AGG + chr1_3:26729108-26729127 None:intergenic 35.0%
TAGTAGTTGTCGGAATAGTT+AGG - chr1_3:26729258-26729277 Msa0112250:intron 35.0%
TTAGGAGTTGGGACTAATAA+TGG - chr1_3:26729276-26729295 Msa0112250:intron 35.0%
GAATAAATTAACGAGACTCC+TGG + chr1_3:26729419-26729438 None:intergenic 35.0%
CTAAAGATCTATGACAGTGA+TGG + chr1_3:26729441-26729460 None:intergenic 35.0%
GCAATCATATCAACCAAACT+TGG - chr1_3:26729460-26729479 Msa0112250:intron 35.0%
GTTCTGCATATTCAAATTCC+AGG + chr1_3:26729720-26729739 None:intergenic 35.0%
ACACAAAACTTCCAAAGACT+TGG + chr1_3:26729868-26729887 None:intergenic 35.0%
TGTGTAATGCAATCTTTAGC+AGG - chr1_3:26729883-26729902 Msa0112250:intron 35.0%
GTGTAATGCAATCTTTAGCA+GGG - chr1_3:26729884-26729903 Msa0112250:intron 35.0%
AAATAACACAAGAGTTGTGC+TGG - chr1_3:26729965-26729984 Msa0112250:intron 35.0%
GGAATAGTGATATGTGAGTT+AGG - chr1_3:26730073-26730092 Msa0112250:intron 35.0%
TAATGTTCTGCTCATTCAGA+TGG - chr1_3:26730234-26730253 Msa0112250:intron 35.0%
!! GACGTGTCTTTTGATTCTTT+TGG - chr1_3:26730260-26730279 Msa0112250:intron 35.0%
!!! CATTTTTTTACCAGTCCTTG+AGG - chr1_3:26730284-26730303 Msa0112250:intron 35.0%
!! AAGGACTTCTAGAATCCATA+CGG + chr1_3:26730348-26730367 None:intergenic 35.0%
ATTAATGTGCTTTCATGTGC+AGG - chr1_3:26730748-26730767 Msa0112250:intron 35.0%
TGTTAACTGTACCATATCTC+TGG - chr1_3:26730876-26730895 Msa0112250:intron 35.0%
GATATGAACTACCAGAGATA+TGG + chr1_3:26730890-26730909 None:intergenic 35.0%
GATCGTTTAAACCAAGATGT+TGG + chr1_3:26730973-26730992 None:intergenic 35.0%
! AAGCAATCTTGAGCGTTTTT+AGG + chr1_3:26731295-26731314 None:intergenic 35.0%
AAGGATGAAGTTAGTACTGT+CGG - chr1_3:26731329-26731348 Msa0112250:intron 35.0%
CTAATTATCATCACCTGAAC+AGG + chr1_3:26731420-26731439 None:intergenic 35.0%
!!! TTTTTTTGGTTTTGTCTGCC+TGG - chr1_3:26731553-26731572 Msa0112250:intron 35.0%
GATTTGTGGTAAGACTAGAT+GGG + chr1_3:26731723-26731742 None:intergenic 35.0%
AGATTTATCACATCCTGATG+CGG - chr1_3:26731879-26731898 Msa0112250:intron 35.0%
!! TACTGATAATGGCTCAATGT+TGG + chr1_3:26731988-26732007 None:intergenic 35.0%
!! AAATTCGTCGGTTCCTAATT+TGG + chr1_3:26732212-26732231 None:intergenic 35.0%
AATTTAACCTAGTAGCCTCA+AGG - chr1_3:26732227-26732246 Msa0112250:intron 35.0%
ATTTAACCTAGTAGCCTCAA+GGG - chr1_3:26732228-26732247 Msa0112250:intron 35.0%
!!! GATTTTAACTATGTCCCTTG+AGG + chr1_3:26732245-26732264 None:intergenic 35.0%
ACATAGTTAAAATCCCGTCA+GGG - chr1_3:26732251-26732270 Msa0112250:intron 35.0%
TTAATTAAAGCAGCACCTAC+TGG + chr1_3:26732278-26732297 None:intergenic 35.0%
TAATTAATAACCGTCAGGGA+CGG - chr1_3:26732291-26732310 Msa0112250:intron 35.0%
ATAGTTAAAGCAGCACCTAA+TGG + chr1_3:26732328-26732347 None:intergenic 35.0%
CTGTGCTATGATAGGTATAT+GGG - chr1_3:26732407-26732426 Msa0112250:intron 35.0%
! TCTAGGGTGTGAGATAAAAA+GGG + chr1_3:26733039-26733058 None:intergenic 35.0%
!! TTCTAGGGTGTGAGATAAAA+AGG + chr1_3:26733040-26733059 None:intergenic 35.0%
! TCTAGGGTGTGAGATAAAAA+GGG + chr1_3:26733039-26733058 None:intergenic 35.0%
!! TTCTAGGGTGTGAGATAAAA+AGG + chr1_3:26733040-26733059 None:intergenic 35.0%
!! CAAAAGCATTAGAGAACATG+GGG + chr1_3:26733229-26733248 None:intergenic 35.0%
!! CCAAAAGCATTAGAGAACAT+GGG + chr1_3:26733230-26733249 None:intergenic 35.0%
! ATAAACCCACAAGTTGAAAG+TGG + chr1_3:26733348-26733367 None:intergenic 35.0%
GAAAAACCAAAGTTCCACAT+AGG - chr1_3:26733582-26733601 Msa0112250:intron 35.0%
CTTTATCCTATGTGGAACTT+TGG + chr1_3:26733591-26733610 None:intergenic 35.0%
! GGTCTTATCTTTATCCTATG+TGG + chr1_3:26733599-26733618 None:intergenic 35.0%
AAACTGACATGTAAGATGAG+AGG + chr1_3:26733647-26733666 None:intergenic 35.0%
!! CAGTTTTGTGATGATGAGTT+AGG - chr1_3:26733661-26733680 Msa0112250:intron 35.0%
!!! TTTTTAGATGGGCTGACTTT+TGG + chr1_3:26733725-26733744 None:intergenic 35.0%
! GATGACAATATTTAGGGTGA+AGG - chr1_3:26733868-26733887 Msa0112250:intron 35.0%
TTCGAGAAGAATAATGTGTG+GGG + chr1_3:26734190-26734209 None:intergenic 35.0%
TATCAGCATGTTCAGAACTT+TGG - chr1_3:26734483-26734502 Msa0112250:intron 35.0%
CTTTAGCTGATGTCAAATTG+CGG - chr1_3:26734541-26734560 Msa0112250:intron 35.0%
TTTAGCTGATGTCAAATTGC+GGG - chr1_3:26734542-26734561 Msa0112250:intron 35.0%
! TCCAAATGAGGAGTTTTTGA+AGG - chr1_3:26734584-26734603 Msa0112250:intron 35.0%
ACCTTCAAAAACTCCTCATT+TGG + chr1_3:26734588-26734607 None:intergenic 35.0%
TAAGTTCAAATCTTAGTGGG+GGG + chr1_3:26734847-26734866 None:intergenic 35.0%
GTAAGTTCAAATCTTAGTGG+GGG + chr1_3:26734848-26734867 None:intergenic 35.0%
! ATTTGAAGCAGTGATGAATC+CGG + chr1_3:26735186-26735205 None:intergenic 35.0%
TATGTGTCATACGATACAAG+TGG + chr1_3:26735308-26735327 None:intergenic 35.0%
!! GAGGATTTTAGGAACAAACA+TGG - chr1_3:26735483-26735502 Msa0112250:intron 35.0%
ATATCAAACAAGGACCTTGT+GGG + chr1_3:26735549-26735568 None:intergenic 35.0%
TATATCAAACAAGGACCTTG+TGG + chr1_3:26735550-26735569 None:intergenic 35.0%
!!! CTCAAGTGAATTTTGGAACT+TGG - chr1_3:26735612-26735631 Msa0112250:intron 35.0%
!! GAAGCATTTTCTATATGCTG+TGG - chr1_3:26735676-26735695 Msa0112250:CDS 35.0%
! GCAGTTGCAAATAAGCTTTT+AGG - chr1_3:26735866-26735885 Msa0112250:intron 35.0%
AAGTTTGCATTTGTCTCACT+TGG - chr1_3:26735944-26735963 Msa0112250:intron 35.0%
! TATTATTTCCAGTCGGTTTC+AGG - chr1_3:26735994-26736013 Msa0112250:intron 35.0%
AGAAACAGGTCACAACTAAA+AGG + chr1_3:26736051-26736070 None:intergenic 35.0%
GTTTAGAGAAGGGACATATA+CGG - chr1_3:26736155-26736174 Msa0112250:CDS 35.0%
AAGATCATATACAGCCAATC+AGG - chr1_3:26736226-26736245 Msa0112250:intron 35.0%
TGTTAAATGTGTGTCTTGCA+TGG + chr1_3:26736489-26736508 None:intergenic 35.0%
ACACACATTTAACATGAACG+TGG - chr1_3:26736495-26736514 Msa0112250:intron 35.0%
!! TGAGAACAGAAGTTTTGTGA+GGG + chr1_3:26736530-26736549 None:intergenic 35.0%
!! TTGAGAACAGAAGTTTTGTG+AGG + chr1_3:26736531-26736550 None:intergenic 35.0%
! AACAGAAAAATGGACTTGGA+CGG + chr1_3:26736885-26736904 None:intergenic 35.0%
! ATTTACTCCGGAGCAATTTT+AGG - chr1_3:26736951-26736970 Msa0112250:CDS 35.0%
!! CAGTACATAAGATTTTGGGT+TGG - chr1_3:26737007-26737026 Msa0112250:intron 35.0%
! GGTTTTCACTTTGCTTTAGT+TGG - chr1_3:26737098-26737117 Msa0112250:CDS 35.0%
! TTTTACAAGTTAGACCCTGT+AGG + chr1_3:26737167-26737186 None:intergenic 35.0%
ATCGAAGACTGTCAATAGAA+AGG + chr1_3:26737257-26737276 None:intergenic 35.0%
ACATCAATTTGACACAAGGT+CGG + chr1_3:26737312-26737331 None:intergenic 35.0%
GGATACATCAATTTGACACA+AGG + chr1_3:26737316-26737335 None:intergenic 35.0%
TACTTGTCAATGGCTTATCA+CGG + chr1_3:26737337-26737356 None:intergenic 35.0%
GGATCATACAATTCAGCAAG+AGG + chr1_3:26720037-26720056 None:intergenic 40.0%
TGCGCAAAGATCTTGATTAC+TGG - chr1_3:26720110-26720129 Msa0112250:three_prime_UTR 40.0%
GCGCAAAGATCTTGATTACT+GGG - chr1_3:26720111-26720130 Msa0112250:three_prime_UTR 40.0%
!! TGTGTCGGTTTGAAAAACCA+AGG - chr1_3:26720160-26720179 Msa0112250:three_prime_UTR 40.0%
TCATGTAACAAGTAGCTCCT+TGG + chr1_3:26720180-26720199 None:intergenic 40.0%
CATAAGGCACATCCTTCTTT+CGG + chr1_3:26720282-26720301 None:intergenic 40.0%
! GGCATATCATTTTCAGTCGT+GGG + chr1_3:26720339-26720358 None:intergenic 40.0%
! TGGCATATCATTTTCAGTCG+TGG + chr1_3:26720340-26720359 None:intergenic 40.0%
ACAAACTCTGTAATGCCAGA+GGG + chr1_3:26720374-26720393 None:intergenic 40.0%
AACAAACTCTGTAATGCCAG+AGG + chr1_3:26720375-26720394 None:intergenic 40.0%
AGAGAACCCTGTTAAGTTCT+TGG + chr1_3:26720494-26720513 None:intergenic 40.0%
!! TATTGAGGCTTCCACTTTTC+AGG - chr1_3:26720640-26720659 Msa0112250:intron 40.0%
!! ATTGAGGCTTCCACTTTTCA+GGG - chr1_3:26720641-26720660 Msa0112250:intron 40.0%
GATCTTCAGCTTGATGTCAA+AGG - chr1_3:26720857-26720876 Msa0112250:intron 40.0%
AAGTATCATGCAGAGCAGTA+TGG - chr1_3:26720944-26720963 Msa0112250:intron 40.0%
ATTGTAAGGGGAACTCATAG+CGG + chr1_3:26721568-26721587 None:intergenic 40.0%
GCAACCTTTATACACTTCAC+AGG - chr1_3:26721645-26721664 Msa0112250:intron 40.0%
ACAAAGAGAGTAGGATAGGA+AGG + chr1_3:26721994-26722013 None:intergenic 40.0%
!!! CACTCCAAATTTTTTGCCCT+GGG + chr1_3:26722184-26722203 None:intergenic 40.0%
!!! ACACTCCAAATTTTTTGCCC+TGG + chr1_3:26722185-26722204 None:intergenic 40.0%
! GCCTGACTTAACTTTTAGCA+TGG - chr1_3:26722260-26722279 Msa0112250:intron 40.0%
GCATAATCTTGTGGGATAGT+TGG - chr1_3:26722376-26722395 Msa0112250:intron 40.0%
! TGCTGAATTTTTGCTAAGCC+AGG - chr1_3:26722770-26722789 Msa0112250:CDS 40.0%
CTCATGAAGGAGTTACAGAA+AGG - chr1_3:26722947-26722966 Msa0112250:intron 40.0%
AAAGAATACTTGGGTGTGGT+AGG - chr1_3:26723047-26723066 Msa0112250:intron 40.0%
!! ACCACTGATTTGAAAGAGTC+GGG + chr1_3:26723331-26723350 None:intergenic 40.0%
! GCTGTTAATGTGCTCAGTTT+TGG - chr1_3:26723528-26723547 Msa0112250:intron 40.0%
TGTTGATATTGCAGGATCGA+AGG - chr1_3:26723571-26723590 Msa0112250:intron 40.0%
GTTGATATTGCAGGATCGAA+GGG - chr1_3:26723572-26723591 Msa0112250:intron 40.0%
GCTACAAGGATAGTCATATG+CGG + chr1_3:26723883-26723902 None:intergenic 40.0%
TGAGATACTGATATAAGCCG+CGG - chr1_3:26723917-26723936 Msa0112250:intron 40.0%
CAGTTACCTCTTACAAATCC+TGG - chr1_3:26724230-26724249 Msa0112250:intron 40.0%
TTGAACCCAGGATTTGTAAG+AGG + chr1_3:26724239-26724258 None:intergenic 40.0%
CTATGTTCGTGAAAGTGACA+AGG - chr1_3:26724307-26724326 Msa0112250:intron 40.0%
GAATCAGACAGCTTACTTGA+AGG + chr1_3:26724376-26724395 None:intergenic 40.0%
TGGAGTTGTGACCTTTACAA+TGG + chr1_3:26724538-26724557 None:intergenic 40.0%
ATCATCATCACGAGCAATCT+GGG + chr1_3:26724670-26724689 None:intergenic 40.0%
! GGCTTTGATCTCAAACTCTA+TGG - chr1_3:26724843-26724862 Msa0112250:intron 40.0%
CAAAGATGAACAACTACTCG+TGG + chr1_3:26724878-26724897 None:intergenic 40.0%
GACATATGGCAACAATTGCA+AGG + chr1_3:26724919-26724938 None:intergenic 40.0%
!! TTTTGCTGTCAGTTGCCTAT+TGG - chr1_3:26725129-26725148 Msa0112250:intron 40.0%
AAATGCAGGCTACATCCAAT+AGG + chr1_3:26725147-26725166 None:intergenic 40.0%
TATTGGATGTAGCCTGCATT+TGG - chr1_3:26725146-26725165 Msa0112250:intron 40.0%
GAAGAAGTTGCGAAAGAGTT+TGG - chr1_3:26725535-26725554 Msa0112250:intron 40.0%
CAAAAACGTTGGTACTCAAC+TGG + chr1_3:26725565-26725584 None:intergenic 40.0%
! CAGTTGAGTACCAACGTTTT+TGG - chr1_3:26725563-26725582 Msa0112250:intron 40.0%
!! AGTACCAACGTTTTTGGATG+TGG - chr1_3:26725569-26725588 Msa0112250:intron 40.0%
!! GTACCAACGTTTTTGGATGT+GGG - chr1_3:26725570-26725589 Msa0112250:intron 40.0%
AGCGCCAAAACCATACATTT+CGG - chr1_3:26725596-26725615 Msa0112250:intron 40.0%
! TTGGCCGAAATGTATGGTTT+TGG + chr1_3:26725603-26725622 None:intergenic 40.0%
GATAACCTCACTCTTAACCA+TGG - chr1_3:26725752-26725771 Msa0112250:intron 40.0%
! TTAAAGTGTCTGGGCTTCAT+TGG + chr1_3:26725977-26725996 None:intergenic 40.0%
GAGGGTAAGGAAAAGTTTGA+AGG + chr1_3:26726221-26726240 None:intergenic 40.0%
TAGGACTTATTAGGAGGGTA+AGG + chr1_3:26726234-26726253 None:intergenic 40.0%
TGTTAGGTGTCTATTAGCTG+GGG + chr1_3:26726387-26726406 None:intergenic 40.0%
GGAAAAACGCTTATCACACA+AGG - chr1_3:26726466-26726485 Msa0112250:intron 40.0%
CTAATCTATAGAAGCTCTCC+AGG + chr1_3:26726566-26726585 None:intergenic 40.0%
TTGGTCTGGTCATAAAAGGT+GGG + chr1_3:26727185-26727204 None:intergenic 40.0%
AAGCTTGGTCTGGTCATAAA+AGG + chr1_3:26727189-26727208 None:intergenic 40.0%
TTTATGACCAGACCAAGCTT+AGG - chr1_3:26727189-26727208 Msa0112250:intron 40.0%
TTTGGAAATAGAAATGGGGC+AGG - chr1_3:26727689-26727708 Msa0112250:intron 40.0%
GTGCTTTACCAATTGCAAGT+AGG - chr1_3:26727931-26727950 Msa0112250:intron 40.0%
GTGCTGTCAAATTGTCATCA+TGG + chr1_3:26728080-26728099 None:intergenic 40.0%
!! TTGACAGCACTGATTAGGAT+TGG - chr1_3:26728090-26728109 Msa0112250:intron 40.0%
TGAAATGGCTGGATTTGATC+CGG - chr1_3:26728220-26728239 Msa0112250:intron 40.0%
ACATTCCGTTGTGCATATTC+AGG - chr1_3:26728336-26728355 Msa0112250:intron 40.0%
TACCTGATTGTCACGAAAAG+TGG + chr1_3:26728410-26728429 None:intergenic 40.0%
TACAAGTGATTGGAAAAGGG+AGG - chr1_3:26729017-26729036 Msa0112250:intron 40.0%
ACAAGTGATTGGAAAAGGGA+GGG - chr1_3:26729018-26729037 Msa0112250:intron 40.0%
!! AAGACCAAGCTTTGGAATCT+TGG - chr1_3:26729072-26729091 Msa0112250:CDS 40.0%
!! CAAGCTTTGGAATCTTGGAA+GGG - chr1_3:26729077-26729096 Msa0112250:CDS 40.0%
TTGTCGGAATAGTTAGGAGT+TGG - chr1_3:26729264-26729283 Msa0112250:intron 40.0%
TGTCGGAATAGTTAGGAGTT+GGG - chr1_3:26729265-26729284 Msa0112250:intron 40.0%
!! GGAAAGATCTAGAGCAGTTT+TGG + chr1_3:26729398-26729417 None:intergenic 40.0%
! AAACTGCTCTAGATCTTTCC+AGG - chr1_3:26729398-26729417 Msa0112250:CDS 40.0%
TGATCATAGGAAATCCCCAT+TGG + chr1_3:26729611-26729630 None:intergenic 40.0%
TGAATATGCAGAACCAGATG+TGG - chr1_3:26729726-26729745 Msa0112250:intron 40.0%
TGCGTGTGGTGAATTCAATT+TGG - chr1_3:26730004-26730023 Msa0112250:intron 40.0%
TTGGACCAAGTAAAACCTCA+AGG + chr1_3:26730302-26730321 None:intergenic 40.0%
!! AGGACTTCTAGAATCCATAC+GGG + chr1_3:26730347-26730366 None:intergenic 40.0%
ATCACAAGTGAAAGGCAAGA+TGG + chr1_3:26730377-26730396 None:intergenic 40.0%
GCAAGAAAGTGGTATACTCT+CGG + chr1_3:26730470-26730489 None:intergenic 40.0%
!! GGTTGTTCGCTTTAGGTTTT+TGG - chr1_3:26730769-26730788 Msa0112250:intron 40.0%
!! TAGGTTTTTGGAGAAACCCA+AGG - chr1_3:26730781-26730800 Msa0112250:intron 40.0%
AGACTGAACTCATCTTCCTT+GGG + chr1_3:26730800-26730819 None:intergenic 40.0%
AAGACTGAACTCATCTTCCT+TGG + chr1_3:26730801-26730820 None:intergenic 40.0%
TATCTGCTCTGTCATGAACT+AGG - chr1_3:26730906-26730925 Msa0112250:intron 40.0%
TACTTGATAGGCTGTGGTTT+AGG + chr1_3:26731040-26731059 None:intergenic 40.0%
! AGTGTTGAATAACCAGGTCT+GGG - chr1_3:26731161-26731180 Msa0112250:intron 40.0%
! AGTACTGGATATTCCTCTTC+CGG - chr1_3:26731259-26731278 Msa0112250:intron 40.0%
GACAGTACTAACTTCATCCT+TGG + chr1_3:26731330-26731349 None:intergenic 40.0%
TAACCAAGTTATCCCTGTTC+AGG - chr1_3:26731404-26731423 Msa0112250:intron 40.0%
! ATTACAGAAGCACAGTACTG+TGG - chr1_3:26731440-26731459 Msa0112250:intron 40.0%
!! ACTCATCTAAGTATTGGACC+AGG + chr1_3:26731574-26731593 None:intergenic 40.0%
GGATTTGTGGTAAGACTAGA+TGG + chr1_3:26731724-26731743 None:intergenic 40.0%
AGGATGTTGTGTTGGATTTG+TGG + chr1_3:26731737-26731756 None:intergenic 40.0%
! TATTAAGCGTAGTGGAGATG+AGG + chr1_3:26731757-26731776 None:intergenic 40.0%
ACTTGTGACTGCTGCATTAA+TGG - chr1_3:26731820-26731839 Msa0112250:intron 40.0%
TCCTAGAGTATGCTAGTTGA+TGG - chr1_3:26732017-26732036 Msa0112250:intron 40.0%
ACCATCAACTAGCATACTCT+AGG + chr1_3:26732021-26732040 None:intergenic 40.0%
GATGGTTCAGTATCTTTACG+AGG - chr1_3:26732035-26732054 Msa0112250:intron 40.0%
ATGAGTGCTTGTCCCTATTA+GGG + chr1_3:26732099-26732118 None:intergenic 40.0%
GCAATCCTAGAGTTGTAAAG+TGG - chr1_3:26732119-26732138 Msa0112250:intron 40.0%
!! ACTTGCCACTTTACAACTCT+AGG + chr1_3:26732127-26732146 None:intergenic 40.0%
TAAAGTGGCAAGTGTCAGAT+TGG - chr1_3:26732134-26732153 Msa0112250:intron 40.0%
AAAGTGGCAAGTGTCAGATT+GGG - chr1_3:26732135-26732154 Msa0112250:intron 40.0%
TATAGCGCTCCTTCCAAATT+AGG - chr1_3:26732196-26732215 Msa0112250:intron 40.0%
GGCTACTAGGTTAAATTCGT+CGG + chr1_3:26732224-26732243 None:intergenic 40.0%
GACATAGTTAAAATCCCGTC+AGG - chr1_3:26732250-26732269 Msa0112250:intron 40.0%
ACGGTTGTGAAATGACCATT+AGG - chr1_3:26732310-26732329 Msa0112250:intron 40.0%
ATGGGTATGTCAGTTCTCAA+GGG - chr1_3:26732384-26732403 Msa0112250:intron 40.0%
GCTGTGCTATGATAGGTATA+TGG - chr1_3:26732406-26732425 Msa0112250:intron 40.0%
ATCAAGTAAGATGGGATGCT+TGG - chr1_3:26732454-26732473 Msa0112250:intron 40.0%
! GGTGGAGTATTTAAGTGACT+TGG - chr1_3:26732475-26732494 Msa0112250:intron 40.0%
ACAAAAGCTAGCTATCAAGG+GGG + chr1_3:26732508-26732527 None:intergenic 40.0%
CACAAAAGCTAGCTATCAAG+GGG + chr1_3:26732509-26732528 None:intergenic 40.0%
CCACAAAAGCTAGCTATCAA+GGG + chr1_3:26732510-26732529 None:intergenic 40.0%
!!! CCTTGATAGCTAGCTTTTGT+GGG - chr1_3:26732508-26732527 Msa0112250:CDS 40.0%
TCAATAAACCTGCAAGCTTC+TGG + chr1_3:26732611-26732630 None:intergenic 40.0%
TTATTGGACATTACGAGCAG+AGG - chr1_3:26732867-26732886 Msa0112250:intron 40.0%
! CCCATGTTCTCTAATGCTTT+TGG - chr1_3:26733227-26733246 Msa0112250:CDS 40.0%
!! GCCAAAAGCATTAGAGAACA+TGG + chr1_3:26733231-26733250 None:intergenic 40.0%
TTAACTACGGCGTCATGAAA+AGG + chr1_3:26733280-26733299 None:intergenic 40.0%
CAGGTGCAACAAGTTAACTA+CGG + chr1_3:26733293-26733312 None:intergenic 40.0%
TTGAGACCACTTTCAACTTG+TGG - chr1_3:26733339-26733358 Msa0112250:intron 40.0%
TGAGACCACTTTCAACTTGT+GGG - chr1_3:26733340-26733359 Msa0112250:intron 40.0%
CTTTGCCTTTGCAGTTTCAA+AGG - chr1_3:26733388-26733407 Msa0112250:intron 40.0%
!! CCTTACAAAACTGGCTTGTA+AGG + chr1_3:26733445-26733464 None:intergenic 40.0%
!! CCTTACAAGCCAGTTTTGTA+AGG - chr1_3:26733442-26733461 Msa0112250:intron 40.0%
CCTTGGATATAAATGGTGGT+TGG + chr1_3:26733523-26733542 None:intergenic 40.0%
CCAACCACCATTTATATCCA+AGG - chr1_3:26733520-26733539 Msa0112250:intron 40.0%
TCCTGCTTATTGTGCTGTAA+CGG + chr1_3:26733945-26733964 None:intergenic 40.0%
AGACACTGCTCAAAATCAGA+TGG - chr1_3:26734321-26734340 Msa0112250:intron 40.0%
! TTATGTACTGGTGGTGCTTT+GGG - chr1_3:26734458-26734477 Msa0112250:intron 40.0%
CACGGATAACCAAGAAGAAA+GGG + chr1_3:26734512-26734531 None:intergenic 40.0%
TCACGGATAACCAAGAAGAA+AGG + chr1_3:26734513-26734532 None:intergenic 40.0%
TTTCTTCTTGGTTATCCGTG+AGG - chr1_3:26734512-26734531 Msa0112250:intron 40.0%
TTCTTCTTGGTTATCCGTGA+GGG - chr1_3:26734513-26734532 Msa0112250:intron 40.0%
GAAGTTGCAAGTTCCAAATG+AGG - chr1_3:26734572-26734591 Msa0112250:intron 40.0%
!! CTGTGTAGCTAACCACTTTT+CGG + chr1_3:26734738-26734757 None:intergenic 40.0%
TACGATTCATGCTGGAAATC+AGG - chr1_3:26734787-26734806 Msa0112250:intron 40.0%
TTATCAAGTGCCTTGACGAT+TGG - chr1_3:26735052-26735071 Msa0112250:intron 40.0%
! ATTTTATGTTGTGGCCCTGT+GGG + chr1_3:26735161-26735180 None:intergenic 40.0%
! AATTTTATGTTGTGGCCCTG+TGG + chr1_3:26735162-26735181 None:intergenic 40.0%
GGGCCACAACATAAAATTTC+CGG - chr1_3:26735164-26735183 Msa0112250:intron 40.0%
! TTGAGCGTGTTGAGGATTTT+AGG - chr1_3:26735472-26735491 Msa0112250:intron 40.0%
TAGGAACAAACATGGTTGCT+TGG - chr1_3:26735491-26735510 Msa0112250:intron 40.0%
AGGAACAAACATGGTTGCTT+GGG - chr1_3:26735492-26735511 Msa0112250:intron 40.0%
AAATGCAAACTTCCACTGCA+GGG + chr1_3:26735936-26735955 None:intergenic 40.0%
!! TCTGAATCTTGAAGGTACTC+AGG + chr1_3:26735974-26735993 None:intergenic 40.0%
TGAAATTACCTGAAACCGAC+TGG + chr1_3:26736005-26736024 None:intergenic 40.0%
AGGTGGAATTAGAGAGCAAA+GGG + chr1_3:26736031-26736050 None:intergenic 40.0%
AAGGTGGAATTAGAGAGCAA+AGG + chr1_3:26736032-26736051 None:intergenic 40.0%
AACAGGTCACAACTAAAAGG+TGG + chr1_3:26736048-26736067 None:intergenic 40.0%
AGTGGATGTTCATGGAGTTA+GGG - chr1_3:26736078-26736097 Msa0112250:intron 40.0%
! ATATGAGCCTTGTCATGAAG+TGG - chr1_3:26736293-26736312 Msa0112250:intron 40.0%
CACATATCCACTTCATGACA+AGG + chr1_3:26736303-26736322 None:intergenic 40.0%
GAAGTGGATATGTGTTGTAG+TGG - chr1_3:26736309-26736328 Msa0112250:intron 40.0%
GCTGGAAAGAATATCATGTC+TGG + chr1_3:26736423-26736442 None:intergenic 40.0%
TGGTAAGGGGATAAACACTT+GGG + chr1_3:26736469-26736488 None:intergenic 40.0%
ATGGTAAGGGGATAAACACT+TGG + chr1_3:26736470-26736489 None:intergenic 40.0%
ATGTGTGTCTTGCATGGTAA+GGG + chr1_3:26736483-26736502 None:intergenic 40.0%
AATGTGTGTCTTGCATGGTA+AGG + chr1_3:26736484-26736503 None:intergenic 40.0%
!! GAGAACAGAAGTTTTGTGAG+GGG + chr1_3:26736529-26736548 None:intergenic 40.0%
ATCATCTTGACCAGTCAGTT+TGG - chr1_3:26736792-26736811 Msa0112250:CDS 40.0%
CATGGTAATACCAAACTGAC+TGG + chr1_3:26736805-26736824 None:intergenic 40.0%
! GCTGAACAGAAAAATGGACT+TGG + chr1_3:26736889-26736908 None:intergenic 40.0%
!! TCCATTTTTCTGTTCAGCCT+AGG - chr1_3:26736891-26736910 Msa0112250:CDS 40.0%
TCCTAGGCTGAACAGAAAAA+TGG + chr1_3:26736895-26736914 None:intergenic 40.0%
CTGAACACCTAAAATTGCTC+CGG + chr1_3:26736961-26736980 None:intergenic 40.0%
!! AGCAATTTTAGGTGTTCAGG+AGG - chr1_3:26736962-26736981 Msa0112250:intron 40.0%
CACTTTGCTTTAGTTGGAGA+TGG - chr1_3:26737104-26737123 Msa0112250:CDS 40.0%
CATCAATTTGACACAAGGTC+GGG + chr1_3:26737311-26737330 None:intergenic 40.0%
TTAATGCGCGTGAGAGTGAT+TGG - chr1_3:26719993-26720012 Msa0112250:three_prime_UTR 45.0%
TAATGCGCGTGAGAGTGATT+GGG - chr1_3:26719994-26720013 Msa0112250:three_prime_UTR 45.0%
TCCTAGTAGAGGCTATGTTG+TGG - chr1_3:26720054-26720073 Msa0112250:three_prime_UTR 45.0%
TCCACAACATAGCCTCTACT+AGG + chr1_3:26720058-26720077 None:intergenic 45.0%
GGAAGACAGATGCATACTTG+AGG - chr1_3:26720075-26720094 Msa0112250:three_prime_UTR 45.0%
CACAACAGTTCCCTGAAAAG+TGG + chr1_3:26720654-26720673 None:intergenic 45.0%
!! CACTTTTCAGGGAACTGTTG+TGG - chr1_3:26720652-26720671 Msa0112250:intron 45.0%
TTTCAGGGAACTGTTGTGGA+AGG - chr1_3:26720656-26720675 Msa0112250:intron 45.0%
TGTGGAAGTAGAACAGCTTG+AGG - chr1_3:26720913-26720932 Msa0112250:intron 45.0%
GTGGAAGTAGAACAGCTTGA+GGG - chr1_3:26720914-26720933 Msa0112250:intron 45.0%
TGCAGAGCAGTATGGTTTAC+AGG - chr1_3:26720952-26720971 Msa0112250:intron 45.0%
AACTGAAGCTGAAGAACAGG+TGG + chr1_3:26721132-26721151 None:intergenic 45.0%
! TGATTTTGCGCGAGACACTA+TGG - chr1_3:26721167-26721186 Msa0112250:intron 45.0%
TTCGACGCCTGTAACTGTAA+TGG - chr1_3:26721512-26721531 Msa0112250:intron 45.0%
TGAATTGGGGGAAAATGGGT+AGG - chr1_3:26721822-26721841 Msa0112250:intron 45.0%
ATAGAAACATGGATGGGCGA+TGG - chr1_3:26721889-26721908 Msa0112250:intron 45.0%
GGAGACAAAGAGAGTAGGAT+AGG + chr1_3:26721998-26722017 None:intergenic 45.0%
ATTACACCTTATCACGCCCA+GGG - chr1_3:26722165-26722184 Msa0112250:intron 45.0%
ACTCATGCACCCTTGCTTAA+TGG - chr1_3:26722354-26722373 Msa0112250:intron 45.0%
GTTGGTTGAAGATGCACGAA+GGG + chr1_3:26722536-26722555 None:intergenic 45.0%
! TGTTGGTTGAAGATGCACGA+AGG + chr1_3:26722537-26722556 None:intergenic 45.0%
CTACGGTACTACAACCCATT+AGG - chr1_3:26722608-26722627 Msa0112250:intron 45.0%
GGAGTTACAGAAAGGTAGTC+CGG - chr1_3:26722955-26722974 Msa0112250:CDS 45.0%
!!! TGCAGTGTTTTGGTTCACAG+CGG - chr1_3:26723269-26723288 Msa0112250:intron 45.0%
CAGTGGTATGATCCAGTCTA+AGG - chr1_3:26723344-26723363 Msa0112250:intron 45.0%
! GTGTCTTACACACCCAGTTT+TGG + chr1_3:26723662-26723681 None:intergenic 45.0%
!! AGGGCTTTAGAAGAGCAGTA+TGG - chr1_3:26724070-26724089 Msa0112250:intron 45.0%
!! GCTTTAGAAGAGCAGTATGG+TGG - chr1_3:26724073-26724092 Msa0112250:intron 45.0%
AAAGGAGAGTTGTTGAACCC+AGG + chr1_3:26724251-26724270 None:intergenic 45.0%
TCAGACAGCTTACTTGAAGG+TGG + chr1_3:26724373-26724392 None:intergenic 45.0%
GAAGAAGAAGGAAAAGGCTG+AGG - chr1_3:26724500-26724519 Msa0112250:intron 45.0%
TCATCATCACGAGCAATCTG+GGG + chr1_3:26724669-26724688 None:intergenic 45.0%
GATCATCATCACGAGCAATC+TGG + chr1_3:26724671-26724690 None:intergenic 45.0%
GATGATCTGCACGAGCAAAT+TGG - chr1_3:26724684-26724703 Msa0112250:intron 45.0%
TCTGCACGAGCAAATTGGAA+AGG - chr1_3:26724689-26724708 Msa0112250:intron 45.0%
CAAGGAGACATTCACTCCAT+TGG + chr1_3:26724901-26724920 None:intergenic 45.0%
GCAGCAACAGAGATCTACAT+AGG + chr1_3:26725088-26725107 None:intergenic 45.0%
TTGCCCACATCCAAAAACGT+TGG + chr1_3:26725576-26725595 None:intergenic 45.0%
GTCTACTTGGCCGAAATGTA+TGG + chr1_3:26725609-26725628 None:intergenic 45.0%
CACTACCATGGTTAAGAGTG+AGG + chr1_3:26725760-26725779 None:intergenic 45.0%
TTGCTGATCCAGATCTTCGA+TGG - chr1_3:26726114-26726133 Msa0112250:intron 45.0%
GTCTGGAGGTCTGTATTCTA+AGG - chr1_3:26726136-26726155 Msa0112250:intron 45.0%
GTTAGGTGTCTATTAGCTGG+GGG + chr1_3:26726386-26726405 None:intergenic 45.0%
! ACCTTTTAGTCCTAACAGGC+TGG - chr1_3:26726795-26726814 Msa0112250:intron 45.0%
CTTGGTCTGGTCATAAAAGG+TGG + chr1_3:26727186-26727205 None:intergenic 45.0%
TCATTTCAGGAGTTGAGAGG+TGG + chr1_3:26727456-26727475 None:intergenic 45.0%
AGTGACCCAGTTGAAAAGGA+GGG + chr1_3:26727776-26727795 None:intergenic 45.0%
TAGTGACCCAGTTGAAAAGG+AGG + chr1_3:26727777-26727796 None:intergenic 45.0%
CAGTAGTGACCCAGTTGAAA+AGG + chr1_3:26727780-26727799 None:intergenic 45.0%
AACTCCTCTTTCAGCTTCTC+AGG + chr1_3:26727862-26727881 None:intergenic 45.0%
AACCTTCAAGCCAGAAGCTT+AGG - chr1_3:26727905-26727924 Msa0112250:intron 45.0%
!! TACCTAAGCTTCTGGCTTGA+AGG + chr1_3:26727910-26727929 None:intergenic 45.0%
AAAGCACGTACCTAAGCTTC+TGG + chr1_3:26727918-26727937 None:intergenic 45.0%
! TGTCACGAAAAGTGGACTTC+TGG + chr1_3:26728402-26728421 None:intergenic 45.0%
!! GTCCACTTTTCGTGACAATC+AGG - chr1_3:26728405-26728424 Msa0112250:intron 45.0%
!! GTTGTGTTTTGAGCAGCTAG+AGG - chr1_3:26728666-26728685 Msa0112250:intron 45.0%
!! TGTTTTGAGCAGCTAGAGGA+TGG - chr1_3:26728670-26728689 Msa0112250:intron 45.0%
CCTTCCAAGATTCCAAAGCT+TGG + chr1_3:26729079-26729098 None:intergenic 45.0%
!! CCAAGCTTTGGAATCTTGGA+AGG - chr1_3:26729076-26729095 Msa0112250:CDS 45.0%
CTTTCTCATGTATTGGGGTG+TGG - chr1_3:26729137-26729156 Msa0112250:intron 45.0%
ACCATGAAGATTTCCACTCC+AGG - chr1_3:26729354-26729373 Msa0112250:intron 45.0%
TCCTGGAGTGGAAATCTTCA+TGG + chr1_3:26729358-26729377 None:intergenic 45.0%
ATGAATGAGTACTCCTGGAG+TGG + chr1_3:26729370-26729389 None:intergenic 45.0%
CTGGGAAAAGATGCCAAGTT+TGG + chr1_3:26729476-26729495 None:intergenic 45.0%
GAACATGTCATGTCCACATC+TGG + chr1_3:26729742-26729761 None:intergenic 45.0%
GTTCTGCTCATTCAGATGGT+TGG - chr1_3:26730238-26730257 Msa0112250:intron 45.0%
CCAAGTAAAACCTCAAGGAC+TGG + chr1_3:26730297-26730316 None:intergenic 45.0%
! CCAGTCCTTGAGGTTTTACT+TGG - chr1_3:26730294-26730313 Msa0112250:intron 45.0%
TTCTGTCTTCGTAACCCGTA+TGG - chr1_3:26730330-26730349 Msa0112250:intron 45.0%
! GGATTCTAGAAGTCCTTCTG+TGG - chr1_3:26730351-26730370 Msa0112250:intron 45.0%
GTGATCACTAGGCAAGAAAG+TGG + chr1_3:26730481-26730500 None:intergenic 45.0%
ATGTGCAGGTTGTTCGCTTT+AGG - chr1_3:26730762-26730781 Msa0112250:intron 45.0%
GAAAGAGTCTCCCAACATCT+TGG - chr1_3:26730959-26730978 Msa0112250:intron 45.0%
CAGACAATTGATCCACTCCT+CGG + chr1_3:26731063-26731082 None:intergenic 45.0%
GGATCAATTGTCTGACATGC+TGG - chr1_3:26731069-26731088 Msa0112250:intron 45.0%
!! CATGCTGGTTCACTACAATC+AGG - chr1_3:26731084-26731103 Msa0112250:intron 45.0%
CCTGGTTATTCAACACTGCA+TGG + chr1_3:26731158-26731177 None:intergenic 45.0%
! CCATGCAGTGTTGAATAACC+AGG - chr1_3:26731155-26731174 Msa0112250:intron 45.0%
! CAGTGTTGAATAACCAGGTC+TGG - chr1_3:26731160-26731179 Msa0112250:intron 45.0%
! AGGTTTTGCAATTCCGGAAG+AGG + chr1_3:26731275-26731294 None:intergenic 45.0%
TGCTTTCCATCATGATGCCA+AGG - chr1_3:26731310-26731329 Msa0112250:intron 45.0%
CTTCATCCTTGGCATCATGA+TGG + chr1_3:26731319-26731338 None:intergenic 45.0%
GATGAAGTTAGTACTGTCGG+TGG - chr1_3:26731332-26731351 Msa0112250:intron 45.0%
TCACCTGAACAGGGATAACT+TGG + chr1_3:26731410-26731429 None:intergenic 45.0%
CACCAAACCACGTGAGTTAT+AGG - chr1_3:26731498-26731517 Msa0112250:intron 45.0%
TGCCTATAACTCACGTGGTT+TGG + chr1_3:26731503-26731522 None:intergenic 45.0%
GTGGTAAGACTAGATGGGAT+GGG + chr1_3:26731718-26731737 None:intergenic 45.0%
TGTGGTAAGACTAGATGGGA+TGG + chr1_3:26731719-26731738 None:intergenic 45.0%
TGGAGATGAGGATGTTGTGT+TGG + chr1_3:26731745-26731764 None:intergenic 45.0%
TCCTGATGCGGAACTTAGAT+TGG - chr1_3:26731891-26731910 Msa0112250:intron 45.0%
ACCAATCTAAGTTCCGCATC+AGG + chr1_3:26731895-26731914 None:intergenic 45.0%
TGAGTGCTTGTCCCTATTAG+GGG + chr1_3:26732098-26732117 None:intergenic 45.0%
CATGAGTGCTTGTCCCTATT+AGG + chr1_3:26732100-26732119 None:intergenic 45.0%
!! TCGTCGGTTCCTAATTTGGA+AGG + chr1_3:26732208-26732227 None:intergenic 45.0%
! TGTTGTAGAGTGCCAACCAT+GGG - chr1_3:26732366-26732385 Msa0112250:intron 45.0%
AGAACTGACATACCCATGGT+TGG + chr1_3:26732381-26732400 None:intergenic 45.0%
CTTGAGAACTGACATACCCA+TGG + chr1_3:26732385-26732404 None:intergenic 45.0%
CATGGGTATGTCAGTTCTCA+AGG - chr1_3:26732383-26732402 Msa0112250:intron 45.0%
AAGTAAGATGGGATGCTTGG+TGG - chr1_3:26732457-26732476 Msa0112250:intron 45.0%
!!! CCCTTGATAGCTAGCTTTTG+TGG - chr1_3:26732507-26732526 Msa0112250:CDS 45.0%
CCCACAAAAGCTAGCTATCA+AGG + chr1_3:26732511-26732530 None:intergenic 45.0%
!!! TGATAGCTAGCTTTTGTGGG+TGG - chr1_3:26732511-26732530 Msa0112250:CDS 45.0%
!!! GATAGCTAGCTTTTGTGGGT+GGG - chr1_3:26732512-26732531 Msa0112250:CDS 45.0%
CAAGCTTCTGGTCATGGAAA+AGG + chr1_3:26732599-26732618 None:intergenic 45.0%
AAGCATTAGAGAACATGGGG+CGG + chr1_3:26733226-26733245 None:intergenic 45.0%
!! CGTAGTTAACTTGTTGCACC+TGG - chr1_3:26733291-26733310 Msa0112250:intron 45.0%
CTTGTTGCACCTGGCAAATT+TGG - chr1_3:26733300-26733319 Msa0112250:intron 45.0%
! GCACCTGGCAAATTTGGTTT+CGG - chr1_3:26733306-26733325 Msa0112250:intron 45.0%
! CACCTGGCAAATTTGGTTTC+GGG - chr1_3:26733307-26733326 Msa0112250:intron 45.0%
! ACCTGGCAAATTTGGTTTCG+GGG - chr1_3:26733308-26733327 Msa0112250:intron 45.0%
!! AACTGGCTTGTAAGGAGAGA+GGG + chr1_3:26733437-26733456 None:intergenic 45.0%
!! AAACTGGCTTGTAAGGAGAG+AGG + chr1_3:26733438-26733457 None:intergenic 45.0%
CGGTCCTTGGATATAAATGG+TGG + chr1_3:26733527-26733546 None:intergenic 45.0%
GCTCGGTCCTTGGATATAAA+TGG + chr1_3:26733530-26733549 None:intergenic 45.0%
ATGACGTTCCAATCCAAGGT+AGG - chr1_3:26733892-26733911 Msa0112250:intron 45.0%
TGACGTTCCAATCCAAGGTA+GGG - chr1_3:26733893-26733912 Msa0112250:intron 45.0%
AGACTTTCCCTACCTTGGAT+TGG + chr1_3:26733903-26733922 None:intergenic 45.0%
CACAAAGACTTTCCCTACCT+TGG + chr1_3:26733908-26733927 None:intergenic 45.0%
TCCGTTACAGCACAATAAGC+AGG - chr1_3:26733941-26733960 Msa0112250:intron 45.0%
! CAAGGCTTTTCTCTTCTTCC+GGG + chr1_3:26734261-26734280 None:intergenic 45.0%
! CCAAGGCTTTTCTCTTCTTC+CGG + chr1_3:26734262-26734281 None:intergenic 45.0%
CATGTATCATCCGATCGTGA+GGG + chr1_3:26734285-26734304 None:intergenic 45.0%
ACATGTATCATCCGATCGTG+AGG + chr1_3:26734286-26734305 None:intergenic 45.0%
! GTTATGTACTGGTGGTGCTT+TGG - chr1_3:26734457-26734476 Msa0112250:intron 45.0%
! CTTTGGAGACCCTTTCTTCT+TGG - chr1_3:26734500-26734519 Msa0112250:intron 45.0%
! CGAAAAGTGGTTAGCTACAC+AGG - chr1_3:26734736-26734755 Msa0112250:intron 45.0%
AGGTACGATTCATGCTACAC+AGG - chr1_3:26734760-26734779 Msa0112250:intron 45.0%
CAGACCTACCTATACCAATG+TGG - chr1_3:26734812-26734831 Msa0112250:intron 45.0%
ACCTACCTATACCAATGTGG+CGG - chr1_3:26734815-26734834 Msa0112250:intron 45.0%
ATATATATGTCTGCCCCCAC+AGG - chr1_3:26735143-26735162 Msa0112250:intron 45.0%
TATATATGTCTGCCCCCACA+GGG - chr1_3:26735144-26735163 Msa0112250:intron 45.0%
! TTTTATGTTGTGGCCCTGTG+GGG + chr1_3:26735160-26735179 None:intergenic 45.0%
GGAACAAACATGGTTGCTTG+GGG - chr1_3:26735493-26735512 Msa0112250:intron 45.0%
GAACAAACATGGTTGCTTGG+GGG - chr1_3:26735494-26735513 Msa0112250:intron 45.0%
ATTGACATCCACAACCCACA+AGG - chr1_3:26735532-26735551 Msa0112250:intron 45.0%
! TGATGATGCCTCAACACATC+AGG - chr1_3:26735783-26735802 Msa0112250:intron 45.0%
CAAATGCAAACTTCCACTGC+AGG + chr1_3:26735937-26735956 None:intergenic 45.0%
ATCCACTCAAGCTCAGAAAC+AGG + chr1_3:26736065-26736084 None:intergenic 45.0%
TGAGCTTGAGTGGATGTTCA+TGG - chr1_3:26736070-26736089 Msa0112250:intron 45.0%
GAGTGGATGTTCATGGAGTT+AGG - chr1_3:26736077-26736096 Msa0112250:intron 45.0%
GTGGATGTTCATGGAGTTAG+GGG - chr1_3:26736079-26736098 Msa0112250:intron 45.0%
TAAGGGGATAAACACTTGGG+AGG + chr1_3:26736466-26736485 None:intergenic 45.0%
TGTGTGTCTTGCATGGTAAG+GGG + chr1_3:26736482-26736501 None:intergenic 45.0%
!! CAGAAGTTTTGTGAGGGGAA+GGG + chr1_3:26736524-26736543 None:intergenic 45.0%
!! ACAGAAGTTTTGTGAGGGGA+AGG + chr1_3:26736525-26736544 None:intergenic 45.0%
!! CGGAGCAATTTTAGGTGTTC+AGG - chr1_3:26736959-26736978 Msa0112250:intron 45.0%
CAAAGTGAAAACCCCTCGAT+GGG + chr1_3:26737091-26737110 None:intergenic 45.0%
!! AGATGGCGCTTTGAGTTGTT+GGG - chr1_3:26737121-26737140 Msa0112250:CDS 45.0%
! CAGTCTTCGATTAGCTGATG+TGG - chr1_3:26737266-26737285 Msa0112250:CDS 45.0%
!!! AATAAAATAAAAAGTATAAA+TGG + chr1_3:26721253-26721272 None:intergenic 5.0%
!!! AACATTATTTTTAATTAATT+AGG - chr1_3:26725264-26725283 Msa0112250:intron 5.0%
!!! ATATTTTTAGATAAAAATTA+TGG - chr1_3:26736372-26736391 Msa0112250:CDS 5.0%
AATGCGCGTGAGAGTGATTG+GGG - chr1_3:26719995-26720014 Msa0112250:three_prime_UTR 50.0%
TGCGCGAGACACTATGGTAA+AGG - chr1_3:26721173-26721192 Msa0112250:intron 50.0%
CGAATACTTCTGTCTGCGTC+AGG + chr1_3:26721626-26721645 None:intergenic 50.0%
CATTACACCTTATCACGCCC+AGG - chr1_3:26722164-26722183 Msa0112250:intron 50.0%
! TTTTTGCCCTGGGCGTGATA+AGG + chr1_3:26722174-26722193 None:intergenic 50.0%
CACGCCCAGGGCAAAAAATT+TGG - chr1_3:26722177-26722196 Msa0112250:intron 50.0%
! GGGATAGTTGGTTCTTGACC+TGG - chr1_3:26722388-26722407 Msa0112250:intron 50.0%
TTAGAAGGGGGCAGTATACC+AGG + chr1_3:26722409-26722428 None:intergenic 50.0%
!!! AGTGTTTTGGTTCACAGCGG+TGG - chr1_3:26723272-26723291 Msa0112250:intron 50.0%
GCCCGACTCTTTCAAATCAG+TGG - chr1_3:26723327-26723346 Msa0112250:intron 50.0%
GATACTGATATAAGCCGCGG+TGG - chr1_3:26723920-26723939 Msa0112250:intron 50.0%
TAGATTCAACAACGCCACCG+CGG + chr1_3:26723937-26723956 None:intergenic 50.0%
! GCAGTATGGTGGTGAAGAAG+AGG - chr1_3:26724084-26724103 Msa0112250:intron 50.0%
ACAGCTTACTTGAAGGTGGC+TGG + chr1_3:26724369-26724388 None:intergenic 50.0%
GACAGCTGGAAAAGGAAAGC+TGG + chr1_3:26724558-26724577 None:intergenic 50.0%
! GAACTGACTAGCCCCATGTT+TGG + chr1_3:26725308-26725327 None:intergenic 50.0%
! TGAGCTGTCACTGGTCTACT+TGG + chr1_3:26725622-26725641 None:intergenic 50.0%
AAGTAGACCAGTGACAGCTC+AGG - chr1_3:26725621-26725640 Msa0112250:intron 50.0%
GATCCAGATCTTCGATGGTC+TGG - chr1_3:26726119-26726138 Msa0112250:intron 50.0%
TCCGTAAGTGCTCCCAAGTA+GGG - chr1_3:26726626-26726645 Msa0112250:intron 50.0%
! TCCCAAGTAGGGGTATGGAT+AGG - chr1_3:26726637-26726656 Msa0112250:intron 50.0%
GCCTATCCATACCCCTACTT+GGG + chr1_3:26726641-26726660 None:intergenic 50.0%
GCCAGCCTGTTAGGACTAAA+AGG + chr1_3:26726799-26726818 None:intergenic 50.0%
CTCAAATAGGCCAGCCTGTT+AGG + chr1_3:26726808-26726827 None:intergenic 50.0%
! TTTGGGATAGGGGTGGAAAC+AGG + chr1_3:26727240-26727259 None:intergenic 50.0%
! TAAGGTGTTTGGGATAGGGG+TGG + chr1_3:26727247-26727266 None:intergenic 50.0%
AGAAAGGACAGCCAGAACAC+AGG + chr1_3:26727348-26727367 None:intergenic 50.0%
CAACTGGGTCACTACTGACA+TGG - chr1_3:26727783-26727802 Msa0112250:intron 50.0%
AGCTTCTCAGGAGGACGAAT+AGG + chr1_3:26727850-26727869 None:intergenic 50.0%
TCCTCCTGAGAAGCTGAAAG+AGG - chr1_3:26727855-26727874 Msa0112250:intron 50.0%
TCCTCTTTCAGCTTCTCAGG+AGG + chr1_3:26727859-26727878 None:intergenic 50.0%
!! ACTTGAGGTGTTGCAGCGTA+TGG - chr1_3:26728013-26728032 Msa0112250:intron 50.0%
GTTTCGTCAGGTATGTTGGG+AGG - chr1_3:26728147-26728166 Msa0112250:intron 50.0%
! GTATGTTGGGAGGCTTTTCG+TGG - chr1_3:26728157-26728176 Msa0112250:intron 50.0%
GTGATTGGAAAAGGGAGGGT+AGG - chr1_3:26729022-26729041 Msa0112250:intron 50.0%
ATTGGAAAAGGGAGGGTAGG+CGG - chr1_3:26729025-26729044 Msa0112250:intron 50.0%
TGTAGGGGAAGACCAAGCTT+TGG - chr1_3:26729064-26729083 Msa0112250:CDS 50.0%
GTTGTGCTGGAATAGCACCT+TGG - chr1_3:26729978-26729997 Msa0112250:intron 50.0%
GGATTGAAAGAGAGGTCTGC+AGG - chr1_3:26730052-26730071 Msa0112250:intron 50.0%
AAAGGCAAGATGGCCACAGA+AGG + chr1_3:26730367-26730386 None:intergenic 50.0%
!! AGGCTGTGGTTTAGGTTGCT+GGG + chr1_3:26731032-26731051 None:intergenic 50.0%
!! TAGGCTGTGGTTTAGGTTGC+TGG + chr1_3:26731033-26731052 None:intergenic 50.0%
TCCACTCCTCGGTACTTGAT+AGG + chr1_3:26731052-26731071 None:intergenic 50.0%
! ACCAGGTCTGGGTTTTTCGT+TGG - chr1_3:26731172-26731191 Msa0112250:intron 50.0%
GTCTGTGCCTATAACTCACG+TGG + chr1_3:26731508-26731527 None:intergenic 50.0%
GTCTATTCATGCGGTGTTCC+TGG - chr1_3:26732064-26732083 Msa0112250:intron 50.0%
TGGAAGCCACACCCCTAATA+GGG - chr1_3:26732084-26732103 Msa0112250:intron 50.0%
CTATGTCCCTTGAGGCTACT+AGG + chr1_3:26732237-26732256 None:intergenic 50.0%
CATTTCACAACCGTCCCTGA+CGG + chr1_3:26732304-26732323 None:intergenic 50.0%
! GTGTTGTAGAGTGCCAACCA+TGG - chr1_3:26732365-26732384 Msa0112250:intron 50.0%
CTCAAGGGCTGTGCTATGAT+AGG - chr1_3:26732399-26732418 Msa0112250:intron 50.0%
TTCCATGACCAGAAGCTTGC+AGG - chr1_3:26732600-26732619 Msa0112250:CDS 50.0%
AACCTGCAAGCTTCTGGTCA+TGG + chr1_3:26732605-26732624 None:intergenic 50.0%
TTGGACATTACGAGCAGAGG+AGG - chr1_3:26732870-26732889 Msa0112250:intron 50.0%
AGCATTAGAGAACATGGGGC+GGG + chr1_3:26733225-26733244 None:intergenic 50.0%
ACCCCGAAACCAAATTTGCC+AGG + chr1_3:26733312-26733331 None:intergenic 50.0%
! TGGCAAATTTGGTTTCGGGG+TGG - chr1_3:26733311-26733330 Msa0112250:intron 50.0%
ACCTCATGCCCAGCAGTATT+GGG + chr1_3:26733552-26733571 None:intergenic 50.0%
TGGGCATGAGGTGGTGTATT+GGG - chr1_3:26733560-26733579 Msa0112250:intron 50.0%
AGGGATGACGTTCCAATCCA+AGG - chr1_3:26733888-26733907 Msa0112250:intron 50.0%
! TTTTTCGTTGCCGCAGATCC+CGG - chr1_3:26734240-26734259 Msa0112250:intron 50.0%
TTCTCTTCTTCCGGGATCTG+CGG + chr1_3:26734253-26734272 None:intergenic 50.0%
CCGGAAGAAGAGAAAAGCCT+TGG - chr1_3:26734259-26734278 Msa0112250:intron 50.0%
CAGCTAAAGTCTCACCCTCA+CGG + chr1_3:26734530-26734549 None:intergenic 50.0%
! AAGTGGTTAGCTACACAGGC+AGG - chr1_3:26734740-26734759 Msa0112250:intron 50.0%
ACGATTCATGCTACACAGGC+AGG - chr1_3:26734764-26734783 Msa0112250:intron 50.0%
AGTTGCCGCCACATTGGTAT+AGG + chr1_3:26734823-26734842 None:intergenic 50.0%
TTTATGTTGTGGCCCTGTGG+GGG + chr1_3:26735159-26735178 None:intergenic 50.0%
! AACAAGGACCTTGTGGGTTG+TGG + chr1_3:26735543-26735562 None:intergenic 50.0%
CATGCAGACCTGATGTGTTG+AGG + chr1_3:26735794-26735813 None:intergenic 50.0%
!! GACCTGTTTCTGAGCTTGAG+TGG - chr1_3:26736060-26736079 Msa0112250:intron 50.0%
AAGGGACATATACGGCGCAT+GGG - chr1_3:26736163-26736182 Msa0112250:CDS 50.0%
CCACCACGAGAAAGCTTCTA+CGG + chr1_3:26736836-26736855 None:intergenic 50.0%
GGCTATACTCAGCACATCCT+AGG + chr1_3:26736911-26736930 None:intergenic 50.0%
AAACCCCTCGATGGGTGAAT+CGG + chr1_3:26737083-26737102 None:intergenic 50.0%
GCAAAGTGAAAACCCCTCGA+TGG + chr1_3:26737092-26737111 None:intergenic 50.0%
!! GAGATGGCGCTTTGAGTTGT+TGG - chr1_3:26737120-26737139 Msa0112250:CDS 50.0%
! AGCCTAAATGGTTCGGGGTG+AGG - chr1_3:26722485-26722504 Msa0112250:intron 55.0%
! GCCTAAATGGTTCGGGGTGA+GGG - chr1_3:26722486-26722505 Msa0112250:intron 55.0%
ACCCTCACCCCGAACCATTT+AGG + chr1_3:26722490-26722509 None:intergenic 55.0%
GTTCACAGCGGTGGAGTTCA+TGG - chr1_3:26723281-26723300 Msa0112250:intron 55.0%
TAGACCAGTGACAGCTCAGG+AGG - chr1_3:26725624-26725643 Msa0112250:intron 55.0%
CCTCCAGACCATCGAAGATC+TGG + chr1_3:26726125-26726144 None:intergenic 55.0%
CCAGATCTTCGATGGTCTGG+AGG - chr1_3:26726122-26726141 Msa0112250:intron 55.0%
CTCCGTAAGTGCTCCCAAGT+AGG - chr1_3:26726625-26726644 Msa0112250:intron 55.0%
!! CCCCTACTTGGGAGCACTTA+CGG + chr1_3:26726630-26726649 None:intergenic 55.0%
CCGTAAGTGCTCCCAAGTAG+GGG - chr1_3:26726627-26726646 Msa0112250:intron 55.0%
AGTGCTCCCAAGTAGGGGTA+TGG - chr1_3:26726632-26726651 Msa0112250:intron 55.0%
GGCCTATCCATACCCCTACT+TGG + chr1_3:26726642-26726661 None:intergenic 55.0%
ATAGGCCAGACCGACTGACA+GGG - chr1_3:26726655-26726674 Msa0112250:intron 55.0%
GGCTACAACCTAGCCTACTC+AGG - chr1_3:26726678-26726697 Msa0112250:intron 55.0%
TGCAAGGCCTAAGCTTGGTC+TGG + chr1_3:26727199-26727218 None:intergenic 55.0%
GGCTTTGCAAGGCCTAAGCT+TGG + chr1_3:26727204-26727223 None:intergenic 55.0%
GATAGGGGTGGAAACAGGCT+GGG + chr1_3:26727235-26727254 None:intergenic 55.0%
CGTGTCTGTGACCTGTGTTC+TGG - chr1_3:26727334-26727353 Msa0112250:intron 55.0%
!! TGAGGTGTTGCAGCGTATGG+TGG - chr1_3:26728016-26728035 Msa0112250:intron 55.0%
! TGTTGGGAGGCTTTTCGTGG+TGG - chr1_3:26728160-26728179 Msa0112250:intron 55.0%
! GTTGGGAGGCTTTTCGTGGT+GGG - chr1_3:26728161-26728180 Msa0112250:intron 55.0%
TTTCAGAAGTCCCCTCCAGC+TGG - chr1_3:26728706-26728725 Msa0112250:intron 55.0%
GTGCTGGAATAGCACCTTGG+TGG - chr1_3:26729981-26730000 Msa0112250:intron 55.0%
ATTCACCACACGCACCACCA+AGG + chr1_3:26729998-26730017 None:intergenic 55.0%
CTGCAACTCGATGTGCATGG+TGG + chr1_3:26730184-26730203 None:intergenic 55.0%
GAGCTGCAACTCGATGTGCA+TGG + chr1_3:26730187-26730206 None:intergenic 55.0%
CCTCGGTACTTGATAGGCTG+TGG + chr1_3:26731046-26731065 None:intergenic 55.0%
! CCACAGCCTATCAAGTACCG+AGG - chr1_3:26731043-26731062 Msa0112250:intron 55.0%
!! GCCTATCAAGTACCGAGGAG+TGG - chr1_3:26731048-26731067 Msa0112250:intron 55.0%
GCCAACGAAAAACCCAGACC+TGG + chr1_3:26731176-26731195 None:intergenic 55.0%
! CTATTAGGGGTGTGGCTTCC+AGG + chr1_3:26732085-26732104 None:intergenic 55.0%
CTGGAAGCCACACCCCTAAT+AGG - chr1_3:26732083-26732102 Msa0112250:intron 55.0%
GCTTGTCCCTATTAGGGGTG+TGG + chr1_3:26732093-26732112 None:intergenic 55.0%
AAATCCCGTCAGGGACCAGT+AGG - chr1_3:26732260-26732279 Msa0112250:intron 55.0%
! GGTGGTTGGCCCGAATTCAT+AGG + chr1_3:26733509-26733528 None:intergenic 55.0%
! ATGCCCAGCAGTATTGGGCT+CGG + chr1_3:26733547-26733566 None:intergenic 55.0%
CACCTCATGCCCAGCAGTAT+TGG + chr1_3:26733553-26733572 None:intergenic 55.0%
CAATACTGCTGGGCATGAGG+TGG - chr1_3:26733551-26733570 Msa0112250:intron 55.0%
CTGGGCATGAGGTGGTGTAT+TGG - chr1_3:26733559-26733578 Msa0112250:intron 55.0%
AAAGCCTTGGCCCTCACGAT+CGG - chr1_3:26734272-26734291 Msa0112250:intron 55.0%
CAGGCAGGTACGATTCATGC+TGG - chr1_3:26734755-26734774 Msa0112250:intron 55.0%
GCCGCCACATTGGTATAGGT+AGG + chr1_3:26734819-26734838 None:intergenic 55.0%
TCTCTGTCTGTTCCCTGCAG+TGG - chr1_3:26735921-26735940 Msa0112250:intron 55.0%
GAAGGGACATATACGGCGCA+TGG - chr1_3:26736162-26736181 Msa0112250:CDS 55.0%
GGCGCATGGGAGCAATATCT+TGG - chr1_3:26736176-26736195 Msa0112250:CDS 55.0%
GAGAAAGCTTCTACGGCAGC+TGG + chr1_3:26736829-26736848 None:intergenic 55.0%
CTGCCGTAGAAGCTTTCTCG+TGG - chr1_3:26736830-26736849 Msa0112250:CDS 55.0%
CCGTAGAAGCTTTCTCGTGG+TGG - chr1_3:26736833-26736852 Msa0112250:CDS 55.0%
ATTGCCCGATTCACCCATCG+AGG - chr1_3:26737075-26737094 Msa0112250:CDS 55.0%
TTGCCCGATTCACCCATCGA+GGG - chr1_3:26737076-26737095 Msa0112250:CDS 55.0%
AACCCCTCGATGGGTGAATC+GGG + chr1_3:26737082-26737101 None:intergenic 55.0%
CACAGCGGTGGAGTTCATGG+TGG - chr1_3:26723284-26723303 Msa0112250:intron 60.0%
GCTTCCTCCTGAGCTGTCAC+TGG + chr1_3:26725631-26725650 None:intergenic 60.0%
! GACAGCTCAGGAGGAAGCAC+AGG - chr1_3:26725633-26725652 Msa0112250:intron 60.0%
GATAGGCCAGACCGACTGAC+AGG - chr1_3:26726654-26726673 Msa0112250:intron 60.0%
TAGGCCAGACCGACTGACAG+GGG - chr1_3:26726656-26726675 Msa0112250:intron 60.0%
GGTTGTAGCCCCCTGTCAGT+CGG + chr1_3:26726668-26726687 None:intergenic 60.0%
ACTCTGGCATGGGCCTGAGT+AGG + chr1_3:26726694-26726713 None:intergenic 60.0%
GGGCAGAGCTAGGCTTTGCA+AGG + chr1_3:26727215-26727234 None:intergenic 60.0%
GAAACAGGCTGGGCAGAGCT+AGG + chr1_3:26727225-26727244 None:intergenic 60.0%
GGATAGGGGTGGAAACAGGC+TGG + chr1_3:26727236-26727255 None:intergenic 60.0%
GTGTTGCAGCGTATGGTGGC+TGG - chr1_3:26728020-26728039 Msa0112250:intron 60.0%
!! TAGCACCTTGGTGGTGCGTG+TGG - chr1_3:26729990-26730009 Msa0112250:intron 60.0%
AGCACCTACTGGTCCCTGAC+GGG + chr1_3:26732267-26732286 None:intergenic 60.0%
CAGCACCTACTGGTCCCTGA+CGG + chr1_3:26732268-26732287 None:intergenic 60.0%
! GCAGTATTGGGCTCGGTCCT+TGG + chr1_3:26733540-26733559 None:intergenic 60.0%
AGGACCGAGCCCAATACTGC+TGG - chr1_3:26733540-26733559 Msa0112250:intron 60.0%
GGACCGAGCCCAATACTGCT+GGG - chr1_3:26733541-26733560 Msa0112250:intron 60.0%
GCCCAATACTGCTGGGCATG+AGG - chr1_3:26733548-26733567 Msa0112250:intron 60.0%
TCATCCGATCGTGAGGGCCA+AGG + chr1_3:26734279-26734298 None:intergenic 60.0%
GCTTCTACGGCAGCTGGACA+TGG + chr1_3:26736823-26736842 None:intergenic 60.0%
TGCCCGATTCACCCATCGAG+GGG - chr1_3:26737077-26737096 Msa0112250:CDS 60.0%
!! GCCATCTGGGAGCATCCCTC+TGG - chr1_3:26720356-26720375 Msa0112250:three_prime_UTR 65.0%
GCCAGAGGGATGCTCCCAGA+TGG + chr1_3:26720360-26720379 None:intergenic 65.0%
AGGCCAGACCGACTGACAGG+GGG - chr1_3:26726657-26726676 Msa0112250:intron 65.0%
TAGCCCCCTGTCAGTCGGTC+TGG + chr1_3:26726663-26726682 None:intergenic 65.0%
GGCATGGGCCTGAGTAGGCT+AGG + chr1_3:26726689-26726708 None:intergenic 65.0%
AAGTCCCCTCCAGCTGGCGA+TGG - chr1_3:26728712-26728731 Msa0112250:intron 65.0%
CTGTCCATCGCCAGCTGGAG+GGG + chr1_3:26728719-26728738 None:intergenic 65.0%
GCTGTCCATCGCCAGCTGGA+GGG + chr1_3:26728720-26728739 None:intergenic 65.0%
TGCTGTCCATCGCCAGCTGG+AGG + chr1_3:26728721-26728740 None:intergenic 65.0%
TGCTGCTGTCCATCGCCAGC+TGG + chr1_3:26728724-26728743 None:intergenic 65.0%
GGGGGCAGTTGCCGCCACAT+TGG + chr1_3:26734829-26734848 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 26719914 26737381 26719914 ID=Msa0112250;Name=Msa0112250
chr1_3 mRNA 26719914 26737381 26719914 ID=Msa0112250-mRNA-1;Parent=Msa0112250;Name=Msa0112250-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|1|0.96|1|0.96|0.96|28|602|1001
chr1_3 exon 26719914 26720557 26719914 ID=Msa0112250-mRNA-1:exon:9026;Parent=Msa0112250-mRNA-1
chr1_3 exon 26721048 26721134 26721048 ID=Msa0112250-mRNA-1:exon:9025;Parent=Msa0112250-mRNA-1
chr1_3 exon 26721280 26721354 26721280 ID=Msa0112250-mRNA-1:exon:9024;Parent=Msa0112250-mRNA-1
chr1_3 exon 26722690 26722806 26722690 ID=Msa0112250-mRNA-1:exon:9023;Parent=Msa0112250-mRNA-1
chr1_3 exon 26722953 26723039 26722953 ID=Msa0112250-mRNA-1:exon:9022;Parent=Msa0112250-mRNA-1
chr1_3 exon 26724404 26724469 26724404 ID=Msa0112250-mRNA-1:exon:9021;Parent=Msa0112250-mRNA-1
chr1_3 exon 26725353 26725418 26725353 ID=Msa0112250-mRNA-1:exon:9020;Parent=Msa0112250-mRNA-1
chr1_3 exon 26725804 26725869 26725804 ID=Msa0112250-mRNA-1:exon:9019;Parent=Msa0112250-mRNA-1
chr1_3 exon 26725958 26726059 26725958 ID=Msa0112250-mRNA-1:exon:9018;Parent=Msa0112250-mRNA-1
chr1_3 exon 26726190 26726367 26726190 ID=Msa0112250-mRNA-1:exon:9017;Parent=Msa0112250-mRNA-1
chr1_3 exon 26726470 26726525 26726470 ID=Msa0112250-mRNA-1:exon:9016;Parent=Msa0112250-mRNA-1
chr1_3 exon 26728500 26728613 26728500 ID=Msa0112250-mRNA-1:exon:9015;Parent=Msa0112250-mRNA-1
chr1_3 exon 26728869 26728937 26728869 ID=Msa0112250-mRNA-1:exon:9014;Parent=Msa0112250-mRNA-1
chr1_3 exon 26729030 26729138 26729030 ID=Msa0112250-mRNA-1:exon:9013;Parent=Msa0112250-mRNA-1
chr1_3 exon 26729369 26729457 26729369 ID=Msa0112250-mRNA-1:exon:9012;Parent=Msa0112250-mRNA-1
chr1_3 exon 26729585 26729659 26729585 ID=Msa0112250-mRNA-1:exon:9011;Parent=Msa0112250-mRNA-1
chr1_3 exon 26731638 26731760 26731638 ID=Msa0112250-mRNA-1:exon:9010;Parent=Msa0112250-mRNA-1
chr1_3 exon 26732504 26732623 26732504 ID=Msa0112250-mRNA-1:exon:9009;Parent=Msa0112250-mRNA-1
chr1_3 exon 26732750 26732830 26732750 ID=Msa0112250-mRNA-1:exon:9008;Parent=Msa0112250-mRNA-1
chr1_3 exon 26732916 26733062 26732916 ID=Msa0112250-mRNA-1:exon:9007;Parent=Msa0112250-mRNA-1
chr1_3 exon 26733190 26733268 26733190 ID=Msa0112250-mRNA-1:exon:9006;Parent=Msa0112250-mRNA-1
chr1_3 exon 26733947 26734021 26733947 ID=Msa0112250-mRNA-1:exon:9005;Parent=Msa0112250-mRNA-1
chr1_3 exon 26735629 26735738 26735629 ID=Msa0112250-mRNA-1:exon:9004;Parent=Msa0112250-mRNA-1
chr1_3 exon 26736101 26736199 26736101 ID=Msa0112250-mRNA-1:exon:9003;Parent=Msa0112250-mRNA-1
chr1_3 exon 26736322 26736437 26736322 ID=Msa0112250-mRNA-1:exon:9002;Parent=Msa0112250-mRNA-1
chr1_3 exon 26736525 26736633 26736525 ID=Msa0112250-mRNA-1:exon:9001;Parent=Msa0112250-mRNA-1
chr1_3 exon 26736756 26736974 26736756 ID=Msa0112250-mRNA-1:exon:9000;Parent=Msa0112250-mRNA-1
chr1_3 exon 26737052 26737381 26737052 ID=Msa0112250-mRNA-1:exon:8999;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26737052 26737381 26737052 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26736756 26736974 26736756 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26736525 26736633 26736525 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26736322 26736437 26736322 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26736101 26736199 26736101 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26735629 26735738 26735629 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26733947 26734021 26733947 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26733190 26733268 26733190 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26732916 26733062 26732916 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26732750 26732830 26732750 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26732504 26732623 26732504 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26731638 26731760 26731638 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26729585 26729659 26729585 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26729369 26729457 26729369 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26729030 26729138 26729030 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26728869 26728937 26728869 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26728500 26728613 26728500 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26726470 26726525 26726470 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26726190 26726367 26726190 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26725958 26726059 26725958 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26725804 26725869 26725804 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26725353 26725418 26725353 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26724404 26724469 26724404 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26722953 26723039 26722953 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26722690 26722806 26722690 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26721280 26721354 26721280 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26721048 26721134 26721048 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 CDS 26720516 26720557 26720516 ID=Msa0112250-mRNA-1:cds;Parent=Msa0112250-mRNA-1
chr1_3 three_prime_UTR 26719914 26720515 26719914 ID=Msa0112250-mRNA-1:three_prime_utr;Parent=Msa0112250-mRNA-1
Gene Sequence

>Msa0112250

TTGTTTGGAGCACTTCTCTTTTCATTTATAGAGAATAATAATCTTGAGCCTTTTGATATTGCAGAAACACAGCATCAGTTTAATGCGCGTGAGAGTGATTGGGGTTTCACTAATTTCATGCCTCTTGCTGAATTGTATGATCCTAGTAGAGGCTATGTTGTGGAAGACAGATGCATACTTGAGGCTGATGTGAATGTGCGCAAAGATCTTGATTACTGGGCACATGACTCAAAAAAAGAAACTGGTTGTGTCGGTTTGAAAAACCAAGGAGCTACTTGTTACATGAATTCTCTTCTTCAGACACTGTATCACATTCCTTATTTCAGAAAGGCTGTGTATCATATGCCCACGACTGAAAATGATATGCCATCTGGGAGCATCCCTCTGGCATTACAGAGTTTGTTTTACAAGTTGCAGTATAATGACAGCAGTGTATCAACAAAAGAGTTAACCAAATCTTTTGGATGGGATACATATGATTCATTCATGCAGCATGATGTCCAAGAACTTAACAGGGTTCTCTGTGAAAAGCTAGAAGACAAAATGAAGGGAACTGTTGTGGAAGGCACTATACAGAAGTTGTTTGAAGGCCACCATATGAACTATATTGAATGCATGAATGTGGATTATAAATCAACAAGAAAAGAATCATTTTATGATCTTCAGCTTGATGTCAAAGGCTGTACAGATGTGTATGCTTCTTTTGATAAGTATGTGGAAGTAGAACAGCTTGAGGGTGATAACAAGTATCATGCAGAGCAGTATGGTTTACAGGAAGCAAGAAAGGGTGTATTGTTCATTGATTTTCCACCTGTTCTTCAGCTTCAGTTAAAACGGTTTGAGTATGATTTTGCGCGAGACACTATGGTAAAGATCAATGACCGCTATGAGTTCCCCTTACAATTAGATCTTGATAGGGATAATGGGAAGTATCTATCTCCTGACGCAGACAGAAGTATTCGCAACCTTTATACACTTCACAGTGTTTTGGTTCACAGCGGTGGAGTTCATGGTGGACACTACTATGCTTATATACGCCCGACTCTTTCAAATCAGTGGTTTAAATTCGATGATGAACGGGTAACAAAAGAAGATACAAACAGGGCTTTAGAAGAGCAGTATGGTGGTGAAGAAGAGTTACCTCTTACAAATCCTGGGTTCAACAACTCTCCTTTTAAATTTACAAAGTACTCAAATGCTTACATGCTTGTCTATGTTCGTGAAAGTGACAAGGATAAGATAATTTGTAATGTGGATGAGAAGGACATTGCCAGCCACCTTCAAATAAGGTTAAAGAAAGAACAAGAGGAAAAAGAGAAGAAGAAGAAGGAAAAGGCTGAGGCTCATTTGTACACCATTGTAAAGATTGCTCGTGATGATGATCTGCACGAGCAAATTGGAAAGGATATATTCTTTGATCTTGTGGATCATGATAAAGTGCGAAGTTTTCGCATTCAAAAACAGATGCCATTTACCATTTTCAAGGAAGAAGTTGCGAAAGAGTTTGGCATACCAGTTGAGTACCAACGTTTTTGGATGTGGGCAAAGCGCCAAAACCATACATTTCGGCCAAGTAGACCAGTGACAGCTCAGGAGGAAGCACAGGCAGTTGGACAGTTAAGGGAAGTTAATAAGGCAAATAATGGAGAGTTAAAGTTATTTTTGGAAATAGAAATGGGGCAGGATTTGCGTCCTATTCGTCCTCCTGAGAAGCTGAAAGAGGAGTTGCTGCTATTCTTTAAACTTTATGAACCTTCAAGCCAGAAGCTTAGGTATGTTGGGAGGCTTTTCGTGGTGGGTAGCAGAAAGCCAGTAGATATATTGAAGAAGCTAAATGAAATGGCTGGATTTGATCCGGATGAAGAAATTGATCTGTTTGAGGAAATAAAATTTGATCCCAAAATCATGTGCGAACATGTTGACCAGAAGTCCACTTTTCGTGACAATCAGCTAGAGGATGGTGATATTATTTGCTTTCAGAAGTCCCCTCCAGCTGGCGATGGACAGCAGCAATATTGCTATCCAGATGTTCCTTCATTCTTTGAATATGTGCAAAACCGTCAAGTTGTTCGCTTTAGGTTTTTGGAGAAACCCAAGGAAGATGAGTTCAGTCTTGAGCTGTCAAAGCTTCACACTTATGATGATGTTGTAGAAAGAGTCTCCCAACATCTTGGTTTAAACGATCCTTCTAAAATCAGACTTACATCTCATAACTGCTACTCCCAGCAACCTAAACCACAGCCTATCAAGTACCGAGGAGTGGATCAATTGTCTGACATGCTGGTTCACTACAATCAGGCTTCTGATATTCTATACTATGAAGTACTGGATATTCCTCTTCCGGAATTGCAAAACCTAAAAACGCTCAAGATTGCTTTCCATCATGATGCCAAGGATGAAGTGATGATAATTAGATTACAGAAGCACAGTACTGTGGCAGATGTAATTAATGATCTAAAATCAAAGGTAGATTTATCACATCCTGATGCGGAACTTAGATTGGTTGAAGTATTTAATCACAAGATCTATAAGATTTTTCATGTCAATGAGAAGATTGAGAATATTAATGATCATTATTGGACATTACGAGCAGAGGAGATCCCGGAAGAAGAGAAAAGCCTTGGCCCTCACGATCGGATGATACATGTTTATCATTTTTTGAAAGACACTGCTCAAAATCAGATGCATGTTCAGAACTTTGGAGACCCTTTCTTCTTGGTTATCCGTGAGGGTGAGACTTTAGCTGATGTCAAATTGCGGGTACAAAAGAAGTTGCAAGTTCCAAATGAGGAGTTTTTGAAGTGGAAGTTTGCATTTGTCTCACTTGGACGTCCTGAGTACCTTCAAGATTCAGATATTATTTCCAGTCGGTTTCAGAGAAGGGACATATACGGCGCATGGGAGCAATATCTTGGACTAGAGCACACTGACAATTCACCAAAAAGATCATATACAGCCAATCAGAATCGTCATGCGTTTGATAAACCAATAAAAATCTACAACTAG
Protein sequence

>Msa0112250

LFGALLFSFIENNNLEPFDIAETQHQFNARESDWGFTNFMPLAELYDPSRGYVVEDRCILEADVNVRKDLDYWAHDSKKETGCVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYNDSSVSTKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECMNVDYKSTRKESFYDLQLDVKGCTDVYASFDKYVEVEQLEGDNKYHAEQYGLQEARKGVLFIDFPPVLQLQLKRFEYDFARDTMVKINDRYEFPLQLDLDRDNGKYLSPDADRSIRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSNQWFKFDDERVTKEDTNRALEEQYGGEEELPLTNPGFNNSPFKFTKYSNAYMLVYVRESDKDKIICNVDEKDIASHLQIRLKKEQEEKEKKKKEKAEAHLYTIVKIARDDDLHEQIGKDIFFDLVDHDKVRSFRIQKQMPFTIFKEEVAKEFGIPVEYQRFWMWAKRQNHTFRPSRPVTAQEEAQAVGQLREVNKANNGELKLFLEIEMGQDLRPIRPPEKLKEELLLFFKLYEPSSQKLRYVGRLFVVGSRKPVDILKKLNEMAGFDPDEEIDLFEEIKFDPKIMCEHVDQKSTFRDNQLEDGDIICFQKSPPAGDGQQQYCYPDVPSFFEYVQNRQVVRFRFLEKPKEDEFSLELSKLHTYDDVVERVSQHLGLNDPSKIRLTSHNCYSQQPKPQPIKYRGVDQLSDMLVHYNQASDILYYEVLDIPLPELQNLKTLKIAFHHDAKDEVMIIRLQKHSTVADVINDLKSKVDLSHPDAELRLVEVFNHKIYKIFHVNEKIENINDHYWTLRAEEIPEEEKSLGPHDRMIHVYHFLKDTAQNQMHVQNFGDPFFLVIREGETLADVKLRVQKKLQVPNEEFLKWKFAFVSLGRPEYLQDSDIISSRFQRRDIYGAWEQYLGLEHTDNSPKRSYTANQNRHAFDKPIKIYN*