AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1286570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1286570 MtrunA17_Chr2g0318671 81.905 315 57 0 6 320 1 315 0.0 566
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1286570 AT3G20630.1 79.048 315 66 0 6 320 1 315 0.0 558

Find 75 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATCAAAATTTGTATTT+TGG 0.104884 8_3:-34725212 None:intergenic
CTATGAGTTTCTTCATATTC+AGG 0.242690 8_3:-34723101 None:intergenic
GGCGTTGTTATTCCTCCATC+TGG 0.265403 8_3:+34723451 Msa1286570:CDS
AATAGTGTTGGTTTCTTAGA+AGG 0.292223 8_3:-34721521 None:intergenic
TTCTTAGAAGGCCTATCTTC+TGG 0.304039 8_3:-34721509 None:intergenic
ATGTTTCGTGTAGGTCTTGA+TGG 0.327495 8_3:+34723059 Msa1286570:intron
CATAAAGCAGACAAAGAAAT+TGG 0.327783 8_3:+34721484 Msa1286570:CDS
TCCAAATTTAGCAAAACATT+TGG 0.328071 8_3:+34724524 Msa1286570:CDS
GTGATAAGAAAGACAATCTT+TGG 0.354423 8_3:+34723491 Msa1286570:CDS
AAAATGCGATTGGTAGGTTC+AGG 0.362949 8_3:-34720993 None:intergenic
GATTGGTCAACATTGGAAAT+AGG 0.374998 8_3:+34725292 Msa1286570:CDS
GTTCCAATCTCGCTAGGGTT+CGG 0.394653 8_3:+34720967 Msa1286570:CDS
GATCCGAACCCTAGCGAGAT+TGG 0.408686 8_3:-34720970 None:intergenic
TGGCACTATTACTGCTGATC+TGG 0.415852 8_3:+34723630 Msa1286570:CDS
TTCTAAGAAACCAACACTAT+TGG 0.417301 8_3:+34721523 Msa1286570:CDS
TAAGGAGCAACTTGCAGCTT+GGG 0.425340 8_3:+34723372 Msa1286570:CDS
CAAAATAATTTAGGTAAGGC+TGG 0.434814 8_3:+34723312 Msa1286570:intron
AATACAATAATAACTGAGAA+AGG 0.438711 8_3:+34720873 None:intergenic
TGCTTCGTTCCAATCTCGCT+AGG 0.448612 8_3:+34720961 Msa1286570:CDS
AGAAATTGGTTCCAGAAGAT+AGG 0.456451 8_3:+34721498 Msa1286570:CDS
CTCCTTACGTTCAGCACCAT+CGG 0.457531 8_3:-34723356 None:intergenic
TGGACCTGGTTATACAGGAT+TGG 0.474300 8_3:+34725275 Msa1286570:CDS
TGCTTTATGCGCAAATAGAT+CGG 0.477786 8_3:-34721470 None:intergenic
GAGCAGTTAGGTACCTTCTC+TGG 0.489496 8_3:-34723176 None:intergenic
ACTGATGGAATGATTCTTTG+TGG 0.494947 8_3:+34723523 Msa1286570:CDS
CTGATGGAATGATTCTTTGT+GGG 0.499028 8_3:+34723524 Msa1286570:CDS
TCGGAAAGGATTACGTTGGT+TGG 0.499687 8_3:+34721426 Msa1286570:CDS
TCCAAGACACTATCATCCTC+TGG 0.503510 8_3:-34724501 None:intergenic
CACCCTCTTGCTGTAAAGCT+TGG 0.510174 8_3:+34723610 Msa1286570:CDS
TGGAATCGAATTCAAGAAAG+TGG 0.512721 8_3:+34725231 Msa1286570:CDS
TGTTTCGTGTAGGTCTTGAT+GGG 0.514346 8_3:+34723060 Msa1286570:intron
TCCAGAGGATGATAGTGTCT+TGG 0.518327 8_3:+34724500 Msa1286570:CDS
TATACAGGATTGGTCAACAT+TGG 0.520849 8_3:+34725285 Msa1286570:CDS
AGCCGATGGTGCTGAACGTA+AGG 0.522162 8_3:+34723354 Msa1286570:CDS
GGTTGGAATTATGACAAGAC+TGG 0.523865 8_3:+34721443 Msa1286570:CDS
GATGAATTTCAGAGGTCAGA+AGG 0.527016 8_3:+34721368 Msa1286570:intron
GACGATGATAACCGAAGCGT+TGG 0.528314 8_3:+34720935 Msa1286570:exon
CTTTGGCTAAATCTAACTGA+TGG 0.536278 8_3:+34723508 Msa1286570:CDS
TTGGTCAAGCTCTCTTTCAG+AGG 0.537242 8_3:-34725193 None:intergenic
TTCTCTGGCAATTCGACAGA+AGG 0.546298 8_3:-34723161 None:intergenic
GCTTCGTTCCAATCTCGCTA+GGG 0.546683 8_3:+34720962 Msa1286570:CDS
AAATGCGATTGGTAGGTTCA+GGG 0.549022 8_3:-34720992 None:intergenic
GTAAGGAGCAACTTGCAGCT+TGG 0.549619 8_3:+34723371 Msa1286570:CDS
ACGAAGCAAATCCAACGCTT+CGG 0.550712 8_3:-34720946 None:intergenic
ATACAATAATAACTGAGAAA+GGG 0.551485 8_3:+34720874 None:intergenic
TTCGTGCTTGAAAATGCGAT+TGG 0.555490 8_3:-34721003 None:intergenic
GCGTTGTTATTCCTCCATCT+GGG 0.558615 8_3:+34723452 Msa1286570:CDS
ATTGTCTTTCTTATCACACT+TGG 0.558797 8_3:-34723485 None:intergenic
TTGGCACATTTCCACCCAGA+TGG 0.567451 8_3:-34723466 None:intergenic
ACTGCTGATCTGGAAGCAGC+AGG 0.573313 8_3:+34723640 Msa1286570:CDS
TTCTGTCGAATTGCCAGAGA+AGG 0.575999 8_3:+34723163 Msa1286570:CDS
CATTGGAAATAGGTGAGAGT+TGG 0.577861 8_3:+34725302 Msa1286570:exon
GTTTCGTGTAGGTCTTGATG+GGG 0.588680 8_3:+34723061 Msa1286570:intron
GTGCCAAGCTTTACAGCAAG+AGG 0.591223 8_3:-34723613 None:intergenic
TGCTTGAAAATGCGATTGGT+AGG 0.595745 8_3:-34720999 None:intergenic
AATTTCAGAGGTCAGAAGGT+GGG 0.598431 8_3:+34721372 Msa1286570:intron
GACACTATCATCCTCTGGAT+AGG 0.601245 8_3:-34724496 None:intergenic
TTGTTATTCCTCCATCTGGG+TGG 0.606247 8_3:+34723455 Msa1286570:CDS
ATACCTACAGCCAATAGTGT+TGG 0.609740 8_3:-34721533 None:intergenic
GCACATTTCCACCCAGATGG+AGG 0.611161 8_3:-34723463 None:intergenic
CTGTTGTAAACTCACTGCAT+AGG 0.613715 8_3:-34723419 None:intergenic
GCTTTCGGAAAGGATTACGT+TGG 0.616166 8_3:+34721422 Msa1286570:CDS
TTGCGTTTCTTACGACACTC+CGG 0.616701 8_3:+34721028 Msa1286570:CDS
GAATTTCAGAGGTCAGAAGG+TGG 0.618238 8_3:+34721371 Msa1286570:intron
GATGCAATCTTACTAGCCGA+TGG 0.625399 8_3:+34723340 Msa1286570:CDS
AAACCAACACTATTGGCTGT+AGG 0.633486 8_3:+34721530 Msa1286570:CDS
TTGACCAATCCTGTATAACC+AGG 0.634222 8_3:-34725279 None:intergenic
TCTCTGGCAATTCGACAGAA+GGG 0.635011 8_3:-34723160 None:intergenic
GGAGCAACTTGCAGCTTGGG+CGG 0.640605 8_3:+34723375 Msa1286570:CDS
ATGGAATGATTCTTTGTGGG+AGG 0.642009 8_3:+34723527 Msa1286570:CDS
TTTCGTGTAGGTCTTGATGG+GGG 0.655544 8_3:+34723062 Msa1286570:intron
AATGAAAGAGACACATACTC+AGG 0.656070 8_3:-34723137 None:intergenic
AGTTTACAACAGATTGACAA+TGG 0.656074 8_3:+34723430 Msa1286570:CDS
TGCCAAGCTTTACAGCAAGA+GGG 0.664548 8_3:-34723612 None:intergenic
AGACGTTTACTCCTATCCAG+AGG 0.709737 8_3:+34724485 Msa1286570:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTCATAATATGAAATAAA+AGG + chr8_3:34722561-34722580 Msa1286570:intron 10.0%
!! ATTCATAATATGAAATAAAA+GGG + chr8_3:34722562-34722581 Msa1286570:intron 10.0%
!! TCATTTATTCAAAATAATTT+AGG + chr8_3:34723303-34723322 Msa1286570:intron 10.0%
!!! ATAAATTTAAATTTTCTTTG+TGG + chr8_3:34724393-34724412 Msa1286570:intron 10.0%
!! TAATTATAAAATTGAGTATT+TGG + chr8_3:34724887-34724906 Msa1286570:intron 10.0%
!! ATTATTAGGTTATATGATAA+AGG + chr8_3:34721686-34721705 Msa1286570:intron 15.0%
!! TTATTAGGTTATATGATAAA+GGG + chr8_3:34721687-34721706 Msa1286570:intron 15.0%
!! AGAATTGAATTCAAATAAAA+GGG - chr8_3:34721967-34721986 None:intergenic 15.0%
!! AAGAATTGAATTCAAATAAA+AGG - chr8_3:34721968-34721987 None:intergenic 15.0%
!! TTTATTTGAATTCAATTCTT+TGG + chr8_3:34721968-34721987 Msa1286570:intron 15.0%
!! TTTAGTATTAAACTTATTAG+TGG - chr8_3:34722481-34722500 None:intergenic 15.0%
!! TATTCAAAATAATTTAGGTA+AGG + chr8_3:34723308-34723327 Msa1286570:intron 15.0%
!! TATGAAAAAATATAAGACAT+CGG - chr8_3:34723759-34723778 None:intergenic 15.0%
!!! TTTTCATATTTGTATATCAT+CGG + chr8_3:34723771-34723790 Msa1286570:intron 15.0%
!! AAAAATTTAATTATCAATGC+CGG + chr8_3:34723878-34723897 Msa1286570:intron 15.0%
!! GGAATAAATTGAAAAATATA+AGG + chr8_3:34723928-34723947 Msa1286570:intron 15.0%
!!! ATTTTTAGTAATTTTAAGCT+TGG + chr8_3:34724009-34724028 Msa1286570:intron 15.0%
!!! TGTTATTAAGCTTTTAAAAT+GGG - chr8_3:34724249-34724268 None:intergenic 15.0%
!!! TTGTTATTAAGCTTTTAAAA+TGG - chr8_3:34724250-34724269 None:intergenic 15.0%
!! TAATTATCCTTATTGTATTA+TGG + chr8_3:34724456-34724475 Msa1286570:intron 15.0%
!! ATTATCAGAAAACAAAATAA+TGG - chr8_3:34724871-34724890 None:intergenic 15.0%
!! CAAATCTAAACAAAATAATA+TGG - chr8_3:34724994-34725013 None:intergenic 15.0%
!!! TTATCTCTCCTTATTTATTA+TGG + chr8_3:34721292-34721311 Msa1286570:intron 20.0%
!!! TTATTTTTGATGAATTTCAG+AGG + chr8_3:34721360-34721379 Msa1286570:intron 20.0%
!! AAAGCACATTATAATCTTAA+TGG - chr8_3:34721580-34721599 None:intergenic 20.0%
!! TCATATAACCTAATAATTGT+GGG - chr8_3:34721683-34721702 None:intergenic 20.0%
!! ATCATATAACCTAATAATTG+TGG - chr8_3:34721684-34721703 None:intergenic 20.0%
!! TATTAGGTTATATGATAAAG+GGG + chr8_3:34721688-34721707 Msa1286570:intron 20.0%
!! TAGGATTATCTTGTATAAAT+AGG + chr8_3:34721840-34721859 Msa1286570:intron 20.0%
!! AGGATTATCTTGTATAAATA+GGG + chr8_3:34721841-34721860 Msa1286570:intron 20.0%
!! GAATTGAATTCAAATAAAAG+GGG - chr8_3:34721966-34721985 None:intergenic 20.0%
!!! AAAGTTAATTAGAAAGTATG+AGG - chr8_3:34722051-34722070 None:intergenic 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG - chr8_3:34722506-34722525 None:intergenic 20.0%
!! TGTCAAAATCTCAAAATATT+TGG - chr8_3:34723034-34723053 None:intergenic 20.0%
!! TCTCTTTAATTAATAAAAGG+GGG - chr8_3:34723224-34723243 None:intergenic 20.0%
!! GTCTCTTTAATTAATAAAAG+GGG - chr8_3:34723225-34723244 None:intergenic 20.0%
!! CGTCTCTTTAATTAATAAAA+GGG - chr8_3:34723226-34723245 None:intergenic 20.0%
!! ACGTCTCTTTAATTAATAAA+AGG - chr8_3:34723227-34723246 None:intergenic 20.0%
!! AATACAGAACAGAAATTTAA+CGG - chr8_3:34723820-34723839 None:intergenic 20.0%
!!! AGCAAAATATGTCTTTAAAA+TGG - chr8_3:34724074-34724093 None:intergenic 20.0%
!!! TTTTTTTATTTGAGCTTCAA+CGG + chr8_3:34724276-34724295 Msa1286570:intron 20.0%
!!! TTAGTTCAAATTATTTGTTG+AGG - chr8_3:34724373-34724392 None:intergenic 20.0%
!!! ATTGAGTTTTAAGTTTTAAC+CGG - chr8_3:34724699-34724718 None:intergenic 20.0%
!! GTCACTTGATATATAATTTA+TGG - chr8_3:34725127-34725146 None:intergenic 20.0%
!!! ACCAAAATACAAATTTTGAT+TGG + chr8_3:34725211-34725230 Msa1286570:CDS 20.0%
!!! TCCAATCAAAATTTGTATTT+TGG - chr8_3:34725215-34725234 None:intergenic 20.0%
! TGAATTAATTGAACGTTGAT+CGG - chr8_3:34721064-34721083 None:intergenic 25.0%
! ATAGCCAACCATAATAAATA+AGG - chr8_3:34721303-34721322 None:intergenic 25.0%
! GTGATACTATAGAAGAAAAA+TGG + chr8_3:34721600-34721619 Msa1286570:intron 25.0%
! ATTATCTTGTATAAATAGGG+AGG + chr8_3:34721844-34721863 Msa1286570:intron 25.0%
! AGTAGTGACTATTGTAAAAT+TGG + chr8_3:34721918-34721937 Msa1286570:intron 25.0%
!! TTTTGTAAAGGGTTTTTGTT+TGG - chr8_3:34721996-34722015 None:intergenic 25.0%
! TGATAACAAGAGATTATAGA+GGG - chr8_3:34722028-34722047 None:intergenic 25.0%
! TGATCAGATTATTGAAGATA+CGG + chr8_3:34722257-34722276 Msa1286570:intron 25.0%
! TGAAATTTGAGTAATGTCTA+AGG - chr8_3:34722536-34722555 None:intergenic 25.0%
! TTAGACATTACTCAAATTTC+AGG + chr8_3:34722535-34722554 Msa1286570:intron 25.0%
!! GCGATTTTCATGTTTATAAT+TGG - chr8_3:34722613-34722632 None:intergenic 25.0%
!! ACAATAACTTGTACTAGTAT+TGG - chr8_3:34722641-34722660 None:intergenic 25.0%
!!! GTTATTGTTTTACTATTGCT+AGG + chr8_3:34722653-34722672 Msa1286570:intron 25.0%
! ATATGCTGTAAATAACAGTA+AGG - chr8_3:34722804-34722823 None:intergenic 25.0%
! AATGAAAGAGACATATATTC+AGG - chr8_3:34722987-34723006 None:intergenic 25.0%
! TTACAAACTGTATGCAAAAT+GGG - chr8_3:34723711-34723730 None:intergenic 25.0%
! ATTACAAACTGTATGCAAAA+TGG - chr8_3:34723712-34723731 None:intergenic 25.0%
! ATTTATTCCTCTGTTTCATA+TGG - chr8_3:34723917-34723936 None:intergenic 25.0%
!!! AGTGTTTAATTTGAATTGTG+AGG + chr8_3:34724140-34724159 Msa1286570:intron 25.0%
!!! TTTAATTTGAATTGTGAGGA+GGG + chr8_3:34724144-34724163 Msa1286570:intron 25.0%
! AATGGGTAAATGTTAATTGT+TGG - chr8_3:34724232-34724251 None:intergenic 25.0%
!! TTTTCTTTGTGGAGTAAATA+TGG + chr8_3:34724404-34724423 Msa1286570:intron 25.0%
! TCCAAATTTAGCAAAACATT+TGG + chr8_3:34724524-34724543 Msa1286570:CDS 25.0%
!!! TTGATAATGTTGAGATTAGA+TGG + chr8_3:34724798-34724817 Msa1286570:intron 25.0%
!! TGATAATGTTGAGATTAGAT+GGG + chr8_3:34724799-34724818 Msa1286570:intron 25.0%
! TCTAAACAAAATAATATGGC+CGG - chr8_3:34724990-34725009 None:intergenic 25.0%
TTCAGTGTAATTACAAGTGT+CGG - chr8_3:34721158-34721177 None:intergenic 30.0%
TTTCAAATTATCAGCTGTGT+CGG + chr8_3:34721189-34721208 Msa1286570:intron 30.0%
! CTCTCCTTATTTATTATGGT+TGG + chr8_3:34721296-34721315 Msa1286570:intron 30.0%
! TTGAACACTTTTCTTGCTTT+CGG + chr8_3:34721407-34721426 Msa1286570:CDS 30.0%
CATAAAGCAGACAAAGAAAT+TGG + chr8_3:34721484-34721503 Msa1286570:CDS 30.0%
!! AATAGTGTTGGTTTCTTAGA+AGG - chr8_3:34721524-34721543 None:intergenic 30.0%
! TTCTAAGAAACCAACACTAT+TGG + chr8_3:34721523-34721542 Msa1286570:CDS 30.0%
TATGTGAATCAAGTCATTCT+TGG + chr8_3:34721553-34721572 Msa1286570:intron 30.0%
GATTGTTAGGATTCAAGATA+AGG + chr8_3:34721712-34721731 Msa1286570:intron 30.0%
ATTCAAGATAAGGAGTTAGT+TGG + chr8_3:34721722-34721741 Msa1286570:intron 30.0%
TTCAAGATAAGGAGTTAGTT+GGG + chr8_3:34721723-34721742 Msa1286570:intron 30.0%
TTGGGGAAGTTATTAGTTAA+TGG + chr8_3:34721741-34721760 Msa1286570:intron 30.0%
TGGGGAAGTTATTAGTTAAT+GGG + chr8_3:34721742-34721761 Msa1286570:intron 30.0%
GTGATAACAAGAGATTATAG+AGG - chr8_3:34722029-34722048 None:intergenic 30.0%
! AAAATACTTTGAGAGCAGAT+GGG - chr8_3:34722085-34722104 None:intergenic 30.0%
! TAAAATACTTTGAGAGCAGA+TGG - chr8_3:34722086-34722105 None:intergenic 30.0%
CTGATCAAGAATCTATCAAT+TGG - chr8_3:34722244-34722263 None:intergenic 30.0%
AGATACGGAATATTAACTGA+TGG + chr8_3:34722272-34722291 Msa1286570:intron 30.0%
AAATAACAGTAAGGAGACTA+TGG - chr8_3:34722795-34722814 None:intergenic 30.0%
! AAAGTTAGTTAGAAAGTGTG+AGG - chr8_3:34722829-34722848 None:intergenic 30.0%
! AAGAGCACAAAATAACTGAT+AGG - chr8_3:34722883-34722902 None:intergenic 30.0%
AAGTAGAATATTCGACAGAA+GGG - chr8_3:34723010-34723029 None:intergenic 30.0%
TAAGTAGAATATTCGACAGA+AGG - chr8_3:34723011-34723030 None:intergenic 30.0%
CTATGAGTTTCTTCATATTC+AGG - chr8_3:34722951-34722970 None:intergenic 30.0%
CAAAATAATTTAGGTAAGGC+TGG + chr8_3:34723312-34723331 Msa1286570:intron 30.0%
AGTTTACAACAGATTGACAA+TGG + chr8_3:34723430-34723449 Msa1286570:CDS 30.0%
ATTGTCTTTCTTATCACACT+TGG - chr8_3:34723488-34723507 None:intergenic 30.0%
GTGATAAGAAAGACAATCTT+TGG + chr8_3:34723491-34723510 Msa1286570:CDS 30.0%
ATATGGAATTACTCTTTCAC+CGG - chr8_3:34723900-34723919 None:intergenic 30.0%
AGTAATTCCATATGAAACAG+AGG + chr8_3:34723907-34723926 Msa1286570:intron 30.0%
!! GTTTAATTTGAATTGTGAGG+AGG + chr8_3:34724143-34724162 Msa1286570:intron 30.0%
!!! TTGGTGGTTATTTTTACAGT+GGG - chr8_3:34724213-34724232 None:intergenic 30.0%
AGGATAATTAGTACATAGTG+AGG - chr8_3:34724446-34724465 None:intergenic 30.0%
! GCCAAATGTTTTGCTAAATT+TGG - chr8_3:34724528-34724547 None:intergenic 30.0%
TGAAAAGTCAATGCCAAAAA+AGG - chr8_3:34724550-34724569 None:intergenic 30.0%
GTATTTAATCCAGCAAACAA+GGG - chr8_3:34724758-34724777 None:intergenic 30.0%
AGTATTTAATCCAGCAAACA+AGG - chr8_3:34724759-34724778 None:intergenic 30.0%
!! CAAGAAGTTGATCCAATTTT+TGG + chr8_3:34725255-34725274 Msa1286570:CDS 30.0%
GTTGATCGGAAAATGATTAC+CGG - chr8_3:34721050-34721069 None:intergenic 35.0%
TGCTTTATGCGCAAATAGAT+CGG - chr8_3:34721473-34721492 None:intergenic 35.0%
! AGAAATTGGTTCCAGAAGAT+AGG + chr8_3:34721498-34721517 Msa1286570:CDS 35.0%
ATGATAAAGGGGAGATTGTT+AGG + chr8_3:34721699-34721718 Msa1286570:intron 35.0%
TCAAGATAAGGAGTTAGTTG+GGG + chr8_3:34721724-34721743 Msa1286570:intron 35.0%
GGGGAAGTTATTAGTTAATG+GGG + chr8_3:34721743-34721762 Msa1286570:intron 35.0%
!!! AGGTTTTCGAGTTAGAGAAA+TGG + chr8_3:34721864-34721883 Msa1286570:intron 35.0%
GAATTCAAATAAAAGGGGCT+CGG - chr8_3:34721961-34721980 None:intergenic 35.0%
!!! GGCATCTTTGGTTTTGTAAA+GGG - chr8_3:34722007-34722026 None:intergenic 35.0%
GAGTGCATGTTGAAAAATTC+AGG - chr8_3:34722191-34722210 None:intergenic 35.0%
ATGTTGTCAATGTGGAAATG+CGG + chr8_3:34722381-34722400 Msa1286570:intron 35.0%
AATGAAAGAGACACATACTC+AGG - chr8_3:34723140-34723159 None:intergenic 35.0%
AAAACTACAAGAGAGCAGTT+AGG - chr8_3:34723191-34723210 None:intergenic 35.0%
CTTTGGCTAAATCTAACTGA+TGG + chr8_3:34723508-34723527 Msa1286570:CDS 35.0%
ACTGATGGAATGATTCTTTG+TGG + chr8_3:34723523-34723542 Msa1286570:CDS 35.0%
CTGATGGAATGATTCTTTGT+GGG + chr8_3:34723524-34723543 Msa1286570:CDS 35.0%
CAAAACAATATGAAGCAAGG+GGG - chr8_3:34723671-34723690 None:intergenic 35.0%
CCAAAACAATATGAAGCAAG+GGG - chr8_3:34723672-34723691 None:intergenic 35.0%
GCCAAAACAATATGAAGCAA+GGG - chr8_3:34723673-34723692 None:intergenic 35.0%
AGCCAAAACAATATGAAGCA+AGG - chr8_3:34723674-34723693 None:intergenic 35.0%
AAACTGTATGCAAAATGGGT+AGG - chr8_3:34723707-34723726 None:intergenic 35.0%
TGTAATCATGACTTTCTCTC+AGG + chr8_3:34723726-34723745 Msa1286570:intron 35.0%
!! GTTCTGTATTTTTGCTACTG+TGG + chr8_3:34723830-34723849 Msa1286570:intron 35.0%
!! TATTTTTGCTACTGTGGCAA+TGG + chr8_3:34723836-34723855 Msa1286570:intron 35.0%
! ATTTTTGCTACTGTGGCAAT+GGG + chr8_3:34723837-34723856 Msa1286570:intron 35.0%
GATTCACTATACATTCTGCA+TGG + chr8_3:34724031-34724050 Msa1286570:intron 35.0%
GTGTTTGACTCATCTTTATC+TGG + chr8_3:34724099-34724118 Msa1286570:intron 35.0%
!!! GTTGGTGGTTATTTTTACAG+TGG - chr8_3:34724214-34724233 None:intergenic 35.0%
GGGTAAATGTTAATTGTTGG+TGG - chr8_3:34724229-34724248 None:intergenic 35.0%
TGAGCTGCCATAATACAATA+AGG - chr8_3:34724466-34724485 None:intergenic 35.0%
!!! GCAAAACATTTGGCCTTTTT+TGG + chr8_3:34724534-34724553 Msa1286570:CDS 35.0%
! TGACTTTTCATCGCTTCAAA+AGG + chr8_3:34724560-34724579 Msa1286570:CDS 35.0%
AATGATATCGCTTTCCTTCA+TGG + chr8_3:34724599-34724618 Msa1286570:intron 35.0%
ATGATATCGCTTTCCTTCAT+GGG + chr8_3:34724600-34724619 Msa1286570:intron 35.0%
TTATGATATCGCTTTCCTGT+TGG + chr8_3:34724731-34724750 Msa1286570:intron 35.0%
TAGCATTTCTCAACGATCTA+TGG + chr8_3:34724822-34724841 Msa1286570:intron 35.0%
AAGAGCTTAAGATGTTATGC+CGG + chr8_3:34724968-34724987 Msa1286570:intron 35.0%
! CTTCAGAAGCTAGTTTAGTT+TGG - chr8_3:34725036-34725055 None:intergenic 35.0%
! TTTTGTCTTTCTACTCTGCT+AGG + chr8_3:34725082-34725101 Msa1286570:intron 35.0%
TGGAATCGAATTCAAGAAAG+TGG + chr8_3:34725231-34725250 Msa1286570:CDS 35.0%
GTATAACCAGGTCCAAAAAT+TGG - chr8_3:34725270-34725289 None:intergenic 35.0%
!! ATTTTTGGACCTGGTTATAC+AGG + chr8_3:34725270-34725289 Msa1286570:CDS 35.0%
!! TATACAGGATTGGTCAACAT+TGG + chr8_3:34725285-34725304 Msa1286570:CDS 35.0%
! GATTGGTCAACATTGGAAAT+AGG + chr8_3:34725292-34725311 Msa1286570:CDS 35.0%
AAATGCGATTGGTAGGTTCA+GGG - chr8_3:34720995-34721014 None:intergenic 40.0%
AAAATGCGATTGGTAGGTTC+AGG - chr8_3:34720996-34721015 None:intergenic 40.0%
TGCTTGAAAATGCGATTGGT+AGG - chr8_3:34721002-34721021 None:intergenic 40.0%
TTCGTGCTTGAAAATGCGAT+TGG - chr8_3:34721006-34721025 None:intergenic 40.0%
TATCCGTGCTTCATAAGTGT+CGG + chr8_3:34721220-34721239 Msa1286570:intron 40.0%
GATGAATTTCAGAGGTCAGA+AGG + chr8_3:34721368-34721387 Msa1286570:intron 40.0%
AATTTCAGAGGTCAGAAGGT+GGG + chr8_3:34721372-34721391 Msa1286570:intron 40.0%
! CACTTTTCTTGCTTTCGGAA+AGG + chr8_3:34721412-34721431 Msa1286570:CDS 40.0%
GGTTGGAATTATGACAAGAC+TGG + chr8_3:34721443-34721462 Msa1286570:CDS 40.0%
TTCTTAGAAGGCCTATCTTC+TGG - chr8_3:34721512-34721531 None:intergenic 40.0%
! AAACCAACACTATTGGCTGT+AGG + chr8_3:34721530-34721549 Msa1286570:CDS 40.0%
ATACCTACAGCCAATAGTGT+TGG - chr8_3:34721536-34721555 None:intergenic 40.0%
GATTCTCGCCCACAATTATT+AGG + chr8_3:34721672-34721691 Msa1286570:intron 40.0%
! GCTTGGTTGTTGTTGTTGTT+GGG + chr8_3:34721812-34721831 Msa1286570:intron 40.0%
! CTTGGTTGTTGTTGTTGTTG+GGG + chr8_3:34721813-34721832 Msa1286570:intron 40.0%
! TTGTTGTTGTTGGGGTAGTT+AGG + chr8_3:34721821-34721840 Msa1286570:intron 40.0%
!!! GGGCATCTTTGGTTTTGTAA+AGG - chr8_3:34722008-34722027 None:intergenic 40.0%
!! GAGATTATAGAGGGCATCTT+TGG - chr8_3:34722019-34722038 None:intergenic 40.0%
ACATTCAGCAAGGTGTATCA+AGG - chr8_3:34722159-34722178 None:intergenic 40.0%
GTAAAACTAAAGTACACCGC+AGG + chr8_3:34722294-34722313 Msa1286570:intron 40.0%
!! GTATCCTGCGGTTTTGTAAA+GGG - chr8_3:34722350-34722369 None:intergenic 40.0%
!! AGTATCCTGCGGTTTTGTAA+AGG - chr8_3:34722351-34722370 None:intergenic 40.0%
CCACATTGACAACATAGCTA+TGG - chr8_3:34722376-34722395 None:intergenic 40.0%
CCATAGCTATGTTGTCAATG+TGG + chr8_3:34722373-34722392 Msa1286570:intron 40.0%
TAACCCACCAACTAAACTAG+TGG + chr8_3:34722852-34722871 Msa1286570:intron 40.0%
AACCCACCAACTAAACTAGT+GGG + chr8_3:34722853-34722872 Msa1286570:intron 40.0%
GACAATCAGATGTTTCGTGT+AGG + chr8_3:34723050-34723069 Msa1286570:intron 40.0%
ATGTTTCGTGTAGGTCTTGA+TGG + chr8_3:34723059-34723078 Msa1286570:intron 40.0%
TGTTTCGTGTAGGTCTTGAT+GGG + chr8_3:34723060-34723079 Msa1286570:intron 40.0%
CTGTTGTAAACTCACTGCAT+AGG - chr8_3:34723422-34723441 None:intergenic 40.0%
ATGGAATGATTCTTTGTGGG+AGG + chr8_3:34723527-34723546 Msa1286570:CDS 40.0%
TTCTTTGTGGGAGGAAAAAC+TGG + chr8_3:34723536-34723555 Msa1286570:CDS 40.0%
TCTTTGTGGGAGGAAAAACT+GGG + chr8_3:34723537-34723556 Msa1286570:CDS 40.0%
! CCCCTTGCTTCATATTGTTT+TGG + chr8_3:34723669-34723688 Msa1286570:intron 40.0%
! TTGTATATCATCGGCACTGA+TGG + chr8_3:34723780-34723799 Msa1286570:intron 40.0%
!! TGTATATCATCGGCACTGAT+GGG + chr8_3:34723781-34723800 Msa1286570:intron 40.0%
AATACAAACCTGCACAGAGT+GGG + chr8_3:34723952-34723971 Msa1286570:intron 40.0%
!!! GTGGTTATTTTTACAGTGGG+AGG - chr8_3:34724210-34724229 None:intergenic 40.0%
ATGCCCTTGAGCAAAACATT+TGG + chr8_3:34724641-34724660 Msa1286570:intron 40.0%
! AGGCCAAATGTTTTGCTCAA+GGG - chr8_3:34724647-34724666 None:intergenic 40.0%
!! TGCACTTGTTGACTTTATGC+CGG + chr8_3:34724677-34724696 Msa1286570:intron 40.0%
!! GTTGATCCAATTTTTGGACC+TGG + chr8_3:34725261-34725280 Msa1286570:CDS 40.0%
TTGACCAATCCTGTATAACC+AGG - chr8_3:34725282-34725301 None:intergenic 40.0%
CATTGGAAATAGGTGAGAGT+TGG + chr8_3:34725302-34725321 Msa1286570:exon 40.0%
ACGAAGCAAATCCAACGCTT+CGG - chr8_3:34720949-34720968 None:intergenic 45.0%
TTGCGTTTCTTACGACACTC+CGG + chr8_3:34721028-34721047 Msa1286570:CDS 45.0%
!! CTTCATAAGTGTCGGTGCTT+CGG + chr8_3:34721228-34721247 Msa1286570:intron 45.0%
GAATTTCAGAGGTCAGAAGG+TGG + chr8_3:34721371-34721390 Msa1286570:intron 45.0%
GCTTTCGGAAAGGATTACGT+TGG + chr8_3:34721422-34721441 Msa1286570:CDS 45.0%
TCGGAAAGGATTACGTTGGT+TGG + chr8_3:34721426-34721445 Msa1286570:CDS 45.0%
GAAAGACAGAAGAACACTGC+AGG + chr8_3:34721635-34721654 Msa1286570:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr8_3:34721796-34721815 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr8_3:34721797-34721816 None:intergenic 45.0%
! GGCTTGGTTGTTGTTGTTGT+TGG + chr8_3:34721811-34721830 Msa1286570:intron 45.0%
! GTGCTGTTCAACATTCAGCA+AGG - chr8_3:34722169-34722188 None:intergenic 45.0%
AGCTCCAATCTTGGAGCTAT+GGG - chr8_3:34722215-34722234 None:intergenic 45.0%
! TGGTGTTAGAGCTCCAATCT+TGG - chr8_3:34722224-34722243 None:intergenic 45.0%
CCAGGTCTTTCAAATACCTG+CGG - chr8_3:34722313-34722332 None:intergenic 45.0%
CTAACCCTTTACAAAACCGC+AGG + chr8_3:34722343-34722362 Msa1286570:intron 45.0%
!! TAGCTATGGAGAGTATCCTG+CGG - chr8_3:34722362-34722381 None:intergenic 45.0%
CTATGGAGCTCTGTTCTCAA+AGG - chr8_3:34722778-34722797 None:intergenic 45.0%
ACCCACCAACTAAACTAGTG+GGG + chr8_3:34722854-34722873 Msa1286570:intron 45.0%
! ACCCCACTAGTTTAGTTGGT+GGG - chr8_3:34722858-34722877 None:intergenic 45.0%
! AACCCCACTAGTTTAGTTGG+TGG - chr8_3:34722859-34722878 None:intergenic 45.0%
! GGTAACCCCACTAGTTTAGT+TGG - chr8_3:34722862-34722881 None:intergenic 45.0%
GTTTCGTGTAGGTCTTGATG+GGG + chr8_3:34723061-34723080 Msa1286570:intron 45.0%
TTTCGTGTAGGTCTTGATGG+GGG + chr8_3:34723062-34723081 Msa1286570:intron 45.0%
TCTCTGGCAATTCGACAGAA+GGG - chr8_3:34723163-34723182 None:intergenic 45.0%
TTCTCTGGCAATTCGACAGA+AGG - chr8_3:34723164-34723183 None:intergenic 45.0%
TTCTGTCGAATTGCCAGAGA+AGG + chr8_3:34723163-34723182 Msa1286570:CDS 45.0%
AGAGACGTTGTAAGCTGCAA+AGG + chr8_3:34723239-34723258 Msa1286570:intron 45.0%
GATGCAATCTTACTAGCCGA+TGG + chr8_3:34723340-34723359 Msa1286570:CDS 45.0%
TAAGGAGCAACTTGCAGCTT+GGG + chr8_3:34723372-34723391 Msa1286570:CDS 45.0%
! GCGTTGTTATTCCTCCATCT+GGG + chr8_3:34723452-34723471 Msa1286570:CDS 45.0%
! TTGTTATTCCTCCATCTGGG+TGG + chr8_3:34723455-34723474 Msa1286570:CDS 45.0%
AGGAAAAACTGGGATGGAAG+TGG + chr8_3:34723547-34723566 Msa1286570:CDS 45.0%
AAAAACTGGGATGGAAGTGG+TGG + chr8_3:34723550-34723569 Msa1286570:CDS 45.0%
TGCCAAGCTTTACAGCAAGA+GGG - chr8_3:34723615-34723634 None:intergenic 45.0%
TGGCACTATTACTGCTGATC+TGG + chr8_3:34723630-34723649 Msa1286570:CDS 45.0%
!! GTATATCATCGGCACTGATG+GGG + chr8_3:34723782-34723801 Msa1286570:intron 45.0%
CAATACAAACCTGCACAGAG+TGG + chr8_3:34723951-34723970 Msa1286570:intron 45.0%
GGTGTGGGGTTCAAATAAAC+TGG + chr8_3:34723982-34724001 Msa1286570:intron 45.0%
AATTGTGAGGAGGGATACAG+TGG + chr8_3:34724153-34724172 Msa1286570:intron 45.0%
ATACAGTGGTTGGAGTGACA+AGG + chr8_3:34724167-34724186 Msa1286570:intron 45.0%
AGACGTTTACTCCTATCCAG+AGG + chr8_3:34724485-34724504 Msa1286570:intron 45.0%
GACACTATCATCCTCTGGAT+AGG - chr8_3:34724499-34724518 None:intergenic 45.0%
! TCCAGAGGATGATAGTGTCT+TGG + chr8_3:34724500-34724519 Msa1286570:CDS 45.0%
TCCAAGACACTATCATCCTC+TGG - chr8_3:34724504-34724523 None:intergenic 45.0%
! CTCAAGGGCATAAAGCTCAA+GGG - chr8_3:34724632-34724651 None:intergenic 45.0%
! GAGGCCAAATGTTTTGCTCA+AGG - chr8_3:34724648-34724667 None:intergenic 45.0%
AACAAGTGCAGGTCTCATAG+AGG - chr8_3:34724667-34724686 None:intergenic 45.0%
GGCATAAAGTCAACAAGTGC+AGG - chr8_3:34724678-34724697 None:intergenic 45.0%
!! CTATGGCTTGCTACTTGTGT+TGG + chr8_3:34724839-34724858 Msa1286570:intron 45.0%
TTGGTCAAGCTCTCTTTCAG+AGG - chr8_3:34725196-34725215 None:intergenic 45.0%
TGGACCTGGTTATACAGGAT+TGG + chr8_3:34725275-34725294 Msa1286570:CDS 45.0%
GACGATGATAACCGAAGCGT+TGG + chr8_3:34720935-34720954 Msa1286570:exon 50.0%
TGCTTCGTTCCAATCTCGCT+AGG + chr8_3:34720961-34720980 Msa1286570:CDS 50.0%
GCTTCGTTCCAATCTCGCTA+GGG + chr8_3:34720962-34720981 Msa1286570:CDS 50.0%
GTTCCAATCTCGCTAGGGTT+CGG + chr8_3:34720967-34720986 Msa1286570:CDS 50.0%
!! TACAAGTGTCGGTGTCGTGT+CGG - chr8_3:34721147-34721166 None:intergenic 50.0%
! GCACCGACACTTATGAAGCA+CGG - chr8_3:34721226-34721245 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr8_3:34721792-34721811 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr8_3:34721798-34721817 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr8_3:34721795-34721814 Msa1286570:intron 50.0%
GGGGCTCGGAAATCTAACAA+GGG - chr8_3:34721947-34721966 None:intergenic 50.0%
AGGGGCTCGGAAATCTAACA+AGG - chr8_3:34721948-34721967 None:intergenic 50.0%
CTCCAATCTTGGAGCTATGG+GGG - chr8_3:34722213-34722232 None:intergenic 50.0%
GCTCCAATCTTGGAGCTATG+GGG - chr8_3:34722214-34722233 None:intergenic 50.0%
GAGCTCCAATCTTGGAGCTA+TGG - chr8_3:34722216-34722235 None:intergenic 50.0%
CCGCAGGTATTTGAAAGACC+TGG + chr8_3:34722310-34722329 Msa1286570:intron 50.0%
AGGGTTAGAGTGAGAGAACC+AGG - chr8_3:34722331-34722350 None:intergenic 50.0%
GTCAATGTGGAAATGCGGCT+CGG + chr8_3:34722386-34722405 Msa1286570:intron 50.0%
!!! TGCCACGCCAATTTTTGGGT+TGG - chr8_3:34722417-34722436 None:intergenic 50.0%
ACCCAAAAATTGGCGTGGCA+CGG + chr8_3:34722417-34722436 Msa1286570:intron 50.0%
! CGGAGCGTAGCGGAAAAATA+CGG - chr8_3:34722734-34722753 None:intergenic 50.0%
GAGCAGTTAGGTACCTTCTC+TGG - chr8_3:34723179-34723198 None:intergenic 50.0%
CTCCTTACGTTCAGCACCAT+CGG - chr8_3:34723359-34723378 None:intergenic 50.0%
GTAAGGAGCAACTTGCAGCT+TGG + chr8_3:34723371-34723390 Msa1286570:CDS 50.0%
! GGCGTTGTTATTCCTCCATC+TGG + chr8_3:34723451-34723470 Msa1286570:CDS 50.0%
TTGGCACATTTCCACCCAGA+TGG - chr8_3:34723469-34723488 None:intergenic 50.0%
TGTGGGAGGAAAAACTGGGA+TGG + chr8_3:34723541-34723560 Msa1286570:CDS 50.0%
! CACCCTCTTGCTGTAAAGCT+TGG + chr8_3:34723610-34723629 Msa1286570:CDS 50.0%
GTGCCAAGCTTTACAGCAAG+AGG - chr8_3:34723616-34723635 None:intergenic 50.0%
TCGCTTTCCTTCATGGGACA+CGG + chr8_3:34724606-34724625 Msa1286570:intron 50.0%
! GCTCAAGGGCATAAAGCTCA+AGG - chr8_3:34724633-34724652 None:intergenic 50.0%
GATCCGAACCCTAGCGAGAT+TGG - chr8_3:34720973-34720992 None:intergenic 55.0%
GTGTCGGACAACACAGACAC+AGG - chr8_3:34721131-34721150 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr8_3:34721784-34721803 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr8_3:34721783-34721802 Msa1286570:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr8_3:34721784-34721803 Msa1286570:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr8_3:34721790-34721809 Msa1286570:intron 55.0%
CTCCCCCATAGCTCCAAGAT+TGG + chr8_3:34722208-34722227 Msa1286570:intron 55.0%
GGCCAACCCAAAAATTGGCG+TGG + chr8_3:34722412-34722431 Msa1286570:intron 55.0%
! CCCGTGCCACGCCAATTTTT+GGG - chr8_3:34722421-34722440 None:intergenic 55.0%
CCCAAAAATTGGCGTGGCAC+GGG + chr8_3:34722418-34722437 Msa1286570:intron 55.0%
! TCCCGTGCCACGCCAATTTT+TGG - chr8_3:34722422-34722441 None:intergenic 55.0%
! AGCCGATGGTGCTGAACGTA+AGG + chr8_3:34723354-34723373 Msa1286570:CDS 55.0%
GCACATTTCCACCCAGATGG+AGG - chr8_3:34723466-34723485 None:intergenic 55.0%
ACTGCTGATCTGGAAGCAGC+AGG + chr8_3:34723640-34723659 Msa1286570:CDS 55.0%
GTGAGGAGGGATACAGTGGT+TGG + chr8_3:34724157-34724176 Msa1286570:intron 55.0%
CCAGCAAACAAGGGTCCAAC+AGG - chr8_3:34724749-34724768 None:intergenic 55.0%
! CCTGTTGGACCCTTGTTTGC+TGG + chr8_3:34724746-34724765 Msa1286570:intron 55.0%
GGCGCGGCCAACCCAAAAAT+TGG + chr8_3:34722407-34722426 Msa1286570:intron 60.0%
!!! CGTAGCGGGCGCTATTTTGG+TGG + chr8_3:34722450-34722469 Msa1286570:intron 60.0%
!!! CGGGCGCTATTTTGGTGGTG+TGG + chr8_3:34722455-34722474 Msa1286570:intron 60.0%
! GCGCGTGTCAGAAGTGCAAG+TGG - chr8_3:34722689-34722708 None:intergenic 60.0%
ACTTCTGACACGCGCCAACG+CGG + chr8_3:34722694-34722713 Msa1286570:intron 60.0%
AAAATACGGACCACCGCCCC+AGG - chr8_3:34722720-34722739 None:intergenic 60.0%
TCCGCTACGCTCCGCTATAG+CGG + chr8_3:34722740-34722759 Msa1286570:intron 60.0%
GTTCTCAAAGGCAACCGCGC+CGG - chr8_3:34722766-34722785 None:intergenic 60.0%
GGAGCAACTTGCAGCTTGGG+CGG + chr8_3:34723375-34723394 Msa1286570:CDS 60.0%
CCTGCACAGAGTGGGACGTA+CGG + chr8_3:34723960-34723979 Msa1286570:intron 60.0%
CTGCACAGAGTGGGACGTAC+GGG + chr8_3:34723961-34723980 Msa1286570:intron 60.0%
AGAGTGGGACGTACGGGTGT+GGG + chr8_3:34723967-34723986 Msa1286570:intron 60.0%
TCAAGGGCCGTGTCCCATGA+AGG - chr8_3:34724616-34724635 None:intergenic 60.0%
! TGTGGAAATGCGGCTCGGCG+CGG + chr8_3:34722391-34722410 Msa1286570:intron 65.0%
AATTGGCGTGGCACGGGAGC+AGG + chr8_3:34722424-34722443 Msa1286570:intron 65.0%
ATTGGCGTGGCACGGGAGCA+GGG + chr8_3:34722425-34722444 Msa1286570:intron 65.0%
!!! GCGCGTAGCGGGCGCTATTT+TGG + chr8_3:34722447-34722466 Msa1286570:intron 65.0%
! GCCGCTATAGCGGAGCGTAG+CGG - chr8_3:34722744-34722763 None:intergenic 65.0%
CTACGCTCCGCTATAGCGGC+CGG + chr8_3:34722744-34722763 Msa1286570:intron 65.0%
CCGTACGTCCCACTCTGTGC+AGG - chr8_3:34723963-34723982 None:intergenic 65.0%
CAGAGTGGGACGTACGGGTG+TGG + chr8_3:34723966-34723985 Msa1286570:intron 65.0%
GAGTGGGACGTACGGGTGTG+GGG + chr8_3:34723968-34723987 Msa1286570:intron 65.0%
! AACCGCGCCGGCCGCTATAG+CGG - chr8_3:34722754-34722773 None:intergenic 70.0%
CACGGGAGCAGGGCGCGTAG+CGG + chr8_3:34722435-34722454 Msa1286570:intron 75.0%
ACGGGAGCAGGGCGCGTAGC+GGG + chr8_3:34722436-34722455 Msa1286570:intron 75.0%
TGACACGCGCCAACGCGGCC+TGG + chr8_3:34722699-34722718 Msa1286570:intron 75.0%
GACACGCGCCAACGCGGCCT+GGG + chr8_3:34722700-34722719 Msa1286570:intron 75.0%
ACACGCGCCAACGCGGCCTG+GGG + chr8_3:34722701-34722720 Msa1286570:intron 75.0%
CTCCGCTATAGCGGCCGGCG+CGG + chr8_3:34722749-34722768 Msa1286570:intron 75.0%
! ACCACCGCCCCAGGCCGCGT+TGG - chr8_3:34722711-34722730 None:intergenic 80.0%
! CGCGCCAACGCGGCCTGGGG+CGG + chr8_3:34722704-34722723 Msa1286570:intron 85.0%
! GCCAACGCGGCCTGGGGCGG+TGG + chr8_3:34722707-34722726 Msa1286570:intron 85.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 34720886 34725334 34720886 ID=Msa1286570;Name=Msa1286570
chr8_3 mRNA 34720886 34725334 34720886 ID=Msa1286570-mRNA-1;Parent=Msa1286570;Name=Msa1286570-mRNA-1;_AED=0.03;_eAED=0.03;_QI=53|1|1|1|1|1|6|17|321
chr8_3 exon 34720886 34721049 34720886 ID=Msa1286570-mRNA-1:exon:10329;Parent=Msa1286570-mRNA-1
chr8_3 exon 34721380 34721551 34721380 ID=Msa1286570-mRNA-1:exon:10330;Parent=Msa1286570-mRNA-1
chr8_3 exon 34723072 34723184 34723072 ID=Msa1286570-mRNA-1:exon:10331;Parent=Msa1286570-mRNA-1
chr8_3 exon 34723325 34723661 34723325 ID=Msa1286570-mRNA-1:exon:10332;Parent=Msa1286570-mRNA-1
chr8_3 exon 34724487 34724581 34724487 ID=Msa1286570-mRNA-1:exon:10333;Parent=Msa1286570-mRNA-1
chr8_3 exon 34725180 34725334 34725180 ID=Msa1286570-mRNA-1:exon:10334;Parent=Msa1286570-mRNA-1
chr8_3 five_prime_UTR 34720886 34720938 34720886 ID=Msa1286570-mRNA-1:five_prime_utr;Parent=Msa1286570-mRNA-1
chr8_3 CDS 34720939 34721049 34720939 ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1
chr8_3 CDS 34721380 34721551 34721380 ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1
chr8_3 CDS 34723072 34723184 34723072 ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1
chr8_3 CDS 34723325 34723661 34723325 ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1
chr8_3 CDS 34724487 34724581 34724487 ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1
chr8_3 CDS 34725180 34725317 34725180 ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1
chr8_3 three_prime_UTR 34725318 34725334 34725318 ID=Msa1286570-mRNA-1:three_prime_utr;Parent=Msa1286570-mRNA-1
Gene Sequence

>Msa1286570

ATGATAACCGAAGCGTTGGATTTGCTTCGTTCCAATCTCGCTAGGGTTCGGATCCCTGAACCTACCAATCGCATTTTCAAGCACGAATGTTGCGTTTCTTACGACACTCCGAGGTCAGAAGGTGGGTTGTTCATTGACTTGAACACTTTTCTTGCTTTCGGAAAGGATTACGTTGGTTGGAATTATGACAAGACTGGAAATCCGATCTATTTGCGCATAAAGCAGACAAAGAAATTGGTTCCAGAAGATAGGCCTTCTAAGAAACCAACACTATTGGCTGTAGGTCTTGATGGGGGATTTGAGAACGATGAGCCTGAATATGAAGAAACTCATAGTATAGTTATACTACCTGAGTATGTGTCTCTTTCATTCCCTTCTGTCGAATTGCCAGAGAAGGTAAGGCTGGCAGTTGATGCAATCTTACTAGCCGATGGTGCTGAACGTAAGGAGCAACTTGCAGCTTGGGCGGCTGATGAGAAGCAAGTTAGTGCCTATGCAGTGAGTTTACAACAGATTGACAATGGCGTTGTTATTCCTCCATCTGGGTGGAAATGTGCCAAGTGTGATAAGAAAGACAATCTTTGGCTAAATCTAACTGATGGAATGATTCTTTGTGGGAGGAAAAACTGGGATGGAAGTGGTGGAAATAATCATGCTATTGAGCATTATGAACAAACAAAACACCCTCTTGCTGTAAAGCTTGGCACTATTACTGCTGATCTGGAAGCAGCAGACGTTTACTCCTATCCAGAGGATGATAGTGTCTTGGATCCAAATTTAGCAAAACATTTGGCCTTTTTTGGCATTGACTTTTCATCGCTTCAAAAGACTGAAATGACAACCTCTGAAAGAGAGCTTGACCAAAATACAAATTTTGATTGGAATCGAATTCAAGAAAGTGGACAAGAAGTTGATCCAATTTTTGGACCTGGTTATACAGGATTGGTCAACATTGGAAATAGGTGA

Protein sequence

>Msa1286570

MITEALDLLRSNLARVRIPEPTNRIFKHECCVSYDTPRSEGGLFIDLNTFLAFGKDYVGWNYDKTGNPIYLRIKQTKKLVPEDRPSKKPTLLAVGLDGGFENDEPEYEETHSIVILPEYVSLSFPSVELPEKVRLAVDAILLADGAERKEQLAAWAADEKQVSAYAVSLQQIDNGVVIPPSGWKCAKCDKKDNLWLNLTDGMILCGRKNWDGSGGNNHAIEHYEQTKHPLAVKLGTITADLEAADVYSYPEDDSVLDPNLAKHLAFFGIDFSSLQKTEMTTSERELDQNTNFDWNRIQESGQEVDPIFGPGYTGLVNIGNR*