Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1286570 | GAU28743.1 | 91.131 | 327 | 22 | 1 | 1 | 320 | 1 | 327 | 0.0 | 629 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1286570 | sp|Q8L6Y1|UBP14_ARATH | 79.048 | 315 | 66 | 0 | 6 | 320 | 1 | 315 | 0.0 | 558 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1286570 | A0A2Z6MFQ4 | 91.131 | 327 | 22 | 1 | 1 | 320 | 1 | 327 | 0.0 | 629 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003220 | Msa1286570 | 0.812440 | 4.236132e-51 | -8.615850e-47 |
Msa0008220 | Msa1286570 | 0.810513 | 1.110647e-50 | -8.615850e-47 |
Msa0031180 | Msa1286570 | 0.807351 | 5.273730e-50 | -8.615850e-47 |
Msa0043500 | Msa1286570 | 0.802415 | 5.671568e-49 | -8.615850e-47 |
Msa0045340 | Msa1286570 | 0.829865 | 4.051692e-55 | -8.615850e-47 |
Msa0054820 | Msa1286570 | 0.827681 | 1.368214e-54 | -8.615850e-47 |
Msa0056450 | Msa1286570 | 0.811065 | 8.434418e-51 | -8.615850e-47 |
Msa0057370 | Msa1286570 | 0.807390 | 5.174127e-50 | -8.615850e-47 |
Msa0064920 | Msa1286570 | 0.805007 | 1.643074e-49 | -8.615850e-47 |
Msa0078480 | Msa1286570 | 0.809247 | 2.079854e-50 | -8.615850e-47 |
Msa0089980 | Msa1286570 | 0.803078 | 4.139189e-49 | -8.615850e-47 |
Msa0090010 | Msa1286570 | 0.801115 | 1.048512e-48 | -8.615850e-47 |
Msa0091780 | Msa1286570 | 0.803778 | 2.964072e-49 | -8.615850e-47 |
Msa0092440 | Msa1286570 | 0.807519 | 4.857844e-50 | -8.615850e-47 |
Msa0096580 | Msa1286570 | 0.803847 | 2.866599e-49 | -8.615850e-47 |
Msa0097610 | Msa1286570 | 0.801529 | 8.627149e-49 | -8.615850e-47 |
Msa0100160 | Msa1286570 | 0.811930 | 5.471991e-51 | -8.615850e-47 |
Msa0112250 | Msa1286570 | 0.811044 | 8.525033e-51 | -8.615850e-47 |
Msa0115090 | Msa1286570 | 0.806933 | 6.467483e-50 | -8.615850e-47 |
Msa0626220 | Msa1286570 | 0.818726 | 1.686235e-52 | -8.615850e-47 |
Msa0652690 | Msa1286570 | 0.803544 | 3.313236e-49 | -8.615850e-47 |
Msa0661320 | Msa1286570 | 0.816672 | 4.901202e-52 | -8.615850e-47 |
Msa0687450 | Msa1286570 | 0.802372 | 5.787981e-49 | -8.615850e-47 |
Msa0689420 | Msa1286570 | 0.814547 | 1.457694e-51 | -8.615850e-47 |
Msa0689760 | Msa1286570 | 0.835550 | 1.571957e-56 | -8.615850e-47 |
Msa0697720 | Msa1286570 | 0.802725 | 4.895476e-49 | -8.615850e-47 |
Msa0703660 | Msa1286570 | 0.807445 | 5.038392e-50 | -8.615850e-47 |
Msa0705390 | Msa1286570 | 0.807230 | 5.596069e-50 | -8.615850e-47 |
Msa0713870 | Msa1286570 | 0.801071 | 1.070507e-48 | -8.615850e-47 |
Msa0716860 | Msa1286570 | 0.828656 | 7.965152e-55 | -8.615850e-47 |
Msa0749400 | Msa1286570 | 0.823631 | 1.248666e-53 | -8.615850e-47 |
Msa0757800 | Msa1286570 | 0.823881 | 1.090958e-53 | -8.615850e-47 |
Msa0763920 | Msa1286570 | 0.806379 | 8.464365e-50 | -8.615850e-47 |
Msa0800700 | Msa1286570 | 0.833764 | 4.422382e-56 | -8.615850e-47 |
Msa0805430 | Msa1286570 | 0.823869 | 1.098116e-53 | -8.615850e-47 |
Msa0828660 | Msa1286570 | 0.817874 | 2.629604e-52 | -8.615850e-47 |
Msa0126230 | Msa1286570 | 0.825511 | 4.503374e-54 | -8.615850e-47 |
Msa0144360 | Msa1286570 | 0.816176 | 6.327944e-52 | -8.615850e-47 |
Msa0160670 | Msa1286570 | 0.837996 | 3.736514e-57 | -8.615850e-47 |
Msa0225220 | Msa1286570 | 0.814141 | 1.791902e-51 | -8.615850e-47 |
Msa0225670 | Msa1286570 | 0.808155 | 3.557762e-50 | -8.615850e-47 |
Msa1253450 | Msa1286570 | 0.807717 | 4.410309e-50 | -8.615850e-47 |
Msa1259640 | Msa1286570 | 0.814663 | 1.374040e-51 | -8.615850e-47 |
Msa1265590 | Msa1286570 | 0.802278 | 6.051377e-49 | -8.615850e-47 |
Msa1282500 | Msa1286570 | 0.827431 | 1.570445e-54 | -8.615850e-47 |
Msa1286550 | Msa1286570 | 0.800458 | 1.427418e-48 | -8.615850e-47 |
Msa1286570 | Msa1286610 | 0.858639 | 7.176349e-63 | -8.615850e-47 |
Msa1286570 | Msa1329790 | 0.811596 | 6.468395e-51 | -8.615850e-47 |
Msa1286570 | Msa1332000 | 0.820140 | 8.025747e-53 | -8.615850e-47 |
Msa1286570 | Msa1333730 | 0.802220 | 6.219889e-49 | -8.615850e-47 |
Msa1286570 | Msa1337480 | 0.800351 | 1.500935e-48 | -8.615850e-47 |
Msa1286570 | Msa1346750 | 0.813286 | 2.764761e-51 | -8.615850e-47 |
Msa1286570 | Msa1359560 | 0.818096 | 2.343067e-52 | -8.615850e-47 |
Msa1286570 | Msa1369690 | 0.809804 | 1.578782e-50 | -8.615850e-47 |
Msa1286570 | Msa1376130 | 0.806241 | 9.050311e-50 | -8.615850e-47 |
Msa1286570 | Msa1377570 | 0.812677 | 3.758761e-51 | -8.615850e-47 |
Msa1286570 | Msa1393820 | 0.801817 | 7.529782e-49 | -8.615850e-47 |
Msa1286570 | Msa1401460 | 0.802527 | 5.379289e-49 | -8.615850e-47 |
Msa1286570 | Msa1411950 | 0.803175 | 3.952278e-49 | -8.615850e-47 |
Msa1286570 | Msa1418240 | 0.801221 | 9.975291e-49 | -8.615850e-47 |
Msa1286570 | Msa1418260 | 0.829913 | 3.944397e-55 | -8.615850e-47 |
Msa1286570 | Msa1420250 | 0.838171 | 3.368988e-57 | -8.615850e-47 |
Msa1286570 | Msa1424780 | 0.807964 | 3.908021e-50 | -8.615850e-47 |
Msa1286570 | Msa1426910 | 0.814218 | 1.722690e-51 | -8.615850e-47 |
Msa1286570 | Msa1438520 | 0.826515 | 2.600290e-54 | -8.615850e-47 |
Msa1286570 | Msa1439710 | 0.803146 | 4.005775e-49 | -8.615850e-47 |
Msa1286570 | Msa1446780 | 0.825537 | 4.441368e-54 | -8.615850e-47 |
Msa1286570 | Msa1450720 | 0.808121 | 3.618728e-50 | -8.615850e-47 |
Msa1286570 | Msa1463010 | 0.825999 | 3.450106e-54 | -8.615850e-47 |
Msa1286570 | Msa1466590 | 0.820710 | 5.940597e-53 | -8.615850e-47 |
Msa1286570 | Msa1467000 | 0.826264 | 2.985095e-54 | -8.615850e-47 |
Msa0379610 | Msa1286570 | 0.827528 | 1.488510e-54 | -8.615850e-47 |
Msa0382370 | Msa1286570 | 0.817299 | 3.543174e-52 | -8.615850e-47 |
Msa0387370 | Msa1286570 | 0.814939 | 1.193243e-51 | -8.615850e-47 |
Msa0387950 | Msa1286570 | 0.810608 | 1.058949e-50 | -8.615850e-47 |
Msa0394690 | Msa1286570 | 0.803921 | 2.767285e-49 | -8.615850e-47 |
Msa0395980 | Msa1286570 | 0.804961 | 1.680367e-49 | -8.615850e-47 |
Msa0398240 | Msa1286570 | 0.806494 | 8.003607e-50 | -8.615850e-47 |
Msa0423840 | Msa1286570 | 0.807810 | 4.213391e-50 | -8.615850e-47 |
Msa0428050 | Msa1286570 | 0.815971 | 7.032997e-52 | -8.615850e-47 |
Msa0430950 | Msa1286570 | 0.824189 | 9.235539e-54 | -8.615850e-47 |
Msa0432160 | Msa1286570 | 0.815391 | 9.470948e-52 | -8.615850e-47 |
Msa0455740 | Msa1286570 | 0.810737 | 9.931735e-51 | -8.615850e-47 |
Msa0468250 | Msa1286570 | 0.823645 | 1.239213e-53 | -8.615850e-47 |
Msa0473330 | Msa1286570 | 0.810728 | 9.980117e-51 | -8.615850e-47 |
Msa0476680 | Msa1286570 | 0.821968 | 3.045162e-53 | -8.615850e-47 |
Msa0480780 | Msa1286570 | 0.803720 | 3.047336e-49 | -8.615850e-47 |
Msa1010070 | Msa1286570 | 0.821839 | 3.262327e-53 | -8.615850e-47 |
Msa1038080 | Msa1286570 | 0.808135 | 3.593108e-50 | -8.615850e-47 |
Msa1079860 | Msa1286570 | 0.819277 | 1.263533e-52 | -8.615850e-47 |
Msa0241470 | Msa1286570 | 0.804830 | 1.789441e-49 | -8.615850e-47 |
Msa0253290 | Msa1286570 | 0.810331 | 1.215839e-50 | -8.615850e-47 |
Msa0259220 | Msa1286570 | 0.812558 | 3.990079e-51 | -8.615850e-47 |
Msa0269520 | Msa1286570 | 0.815156 | 1.068110e-51 | -8.615850e-47 |
Msa0284350 | Msa1286570 | 0.802269 | 6.078721e-49 | -8.615850e-47 |
Msa0296820 | Msa1286570 | 0.806121 | 9.591010e-50 | -8.615850e-47 |
Msa0304100 | Msa1286570 | 0.807391 | 5.170945e-50 | -8.615850e-47 |
Msa0305330 | Msa1286570 | 0.829569 | 4.784627e-55 | -8.615850e-47 |
Msa0308460 | Msa1286570 | 0.812414 | 4.291529e-51 | -8.615850e-47 |
Msa0336310 | Msa1286570 | 0.800581 | 1.347477e-48 | -8.615850e-47 |
Msa0341840 | Msa1286570 | 0.808264 | 3.373579e-50 | -8.615850e-47 |
Msa0342010 | Msa1286570 | 0.832879 | 7.346410e-56 | -8.615850e-47 |
Msa0358400 | Msa1286570 | 0.839855 | 1.234361e-57 | -8.615850e-47 |
Msa1129690 | Msa1286570 | 0.812915 | 3.333126e-51 | -8.615850e-47 |
Msa1201640 | Msa1286570 | 0.800227 | 1.591286e-48 | -8.615850e-47 |
Msa1211340 | Msa1286570 | 0.814431 | 1.546305e-51 | -8.615850e-47 |
Msa0483740 | Msa1286570 | 0.842499 | 2.491216e-58 | -8.615850e-47 |
Msa0510290 | Msa1286570 | 0.844721 | 6.343151e-59 | -8.615850e-47 |
Msa0512870 | Msa1286570 | 0.812150 | 4.899445e-51 | -8.615850e-47 |
Msa0517090 | Msa1286570 | 0.802351 | 5.847157e-49 | -8.615850e-47 |
Msa0521010 | Msa1286570 | 0.821134 | 4.744012e-53 | -8.615850e-47 |
Msa0531250 | Msa1286570 | 0.808479 | 3.034896e-50 | -8.615850e-47 |
Msa0576680 | Msa1286570 | 0.821966 | 3.048233e-53 | -8.615850e-47 |
Msa0592180 | Msa1286570 | 0.803048 | 4.197860e-49 | -8.615850e-47 |
Msa0601950 | Msa1286570 | 0.803110 | 4.075644e-49 | -8.615850e-47 |
Msa0844390 | Msa1286570 | 0.807904 | 4.023915e-50 | -8.615850e-47 |
Msa0868160 | Msa1286570 | 0.812096 | 5.035471e-51 | -8.615850e-47 |
Msa0903780 | Msa1286570 | 0.809460 | 1.871412e-50 | -8.615850e-47 |
Msa0926670 | Msa1286570 | 0.803922 | 2.765591e-49 | -8.615850e-47 |
Msa0945240 | Msa1286570 | 0.805945 | 1.044521e-49 | -8.615850e-47 |
Msa0969330 | Msa1286570 | 0.802608 | 5.174147e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1286570 | MtrunA17_Chr2g0318671 | 81.905 | 315 | 57 | 0 | 6 | 320 | 1 | 315 | 0.0 | 566 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1286570 | AT3G20630.1 | 79.048 | 315 | 66 | 0 | 6 | 320 | 1 | 315 | 0.0 | 558 |
Find 75 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAATCAAAATTTGTATTT+TGG | 0.104884 | 8_3:-34725212 | None:intergenic |
CTATGAGTTTCTTCATATTC+AGG | 0.242690 | 8_3:-34723101 | None:intergenic |
GGCGTTGTTATTCCTCCATC+TGG | 0.265403 | 8_3:+34723451 | Msa1286570:CDS |
AATAGTGTTGGTTTCTTAGA+AGG | 0.292223 | 8_3:-34721521 | None:intergenic |
TTCTTAGAAGGCCTATCTTC+TGG | 0.304039 | 8_3:-34721509 | None:intergenic |
ATGTTTCGTGTAGGTCTTGA+TGG | 0.327495 | 8_3:+34723059 | Msa1286570:intron |
CATAAAGCAGACAAAGAAAT+TGG | 0.327783 | 8_3:+34721484 | Msa1286570:CDS |
TCCAAATTTAGCAAAACATT+TGG | 0.328071 | 8_3:+34724524 | Msa1286570:CDS |
GTGATAAGAAAGACAATCTT+TGG | 0.354423 | 8_3:+34723491 | Msa1286570:CDS |
AAAATGCGATTGGTAGGTTC+AGG | 0.362949 | 8_3:-34720993 | None:intergenic |
GATTGGTCAACATTGGAAAT+AGG | 0.374998 | 8_3:+34725292 | Msa1286570:CDS |
GTTCCAATCTCGCTAGGGTT+CGG | 0.394653 | 8_3:+34720967 | Msa1286570:CDS |
GATCCGAACCCTAGCGAGAT+TGG | 0.408686 | 8_3:-34720970 | None:intergenic |
TGGCACTATTACTGCTGATC+TGG | 0.415852 | 8_3:+34723630 | Msa1286570:CDS |
TTCTAAGAAACCAACACTAT+TGG | 0.417301 | 8_3:+34721523 | Msa1286570:CDS |
TAAGGAGCAACTTGCAGCTT+GGG | 0.425340 | 8_3:+34723372 | Msa1286570:CDS |
CAAAATAATTTAGGTAAGGC+TGG | 0.434814 | 8_3:+34723312 | Msa1286570:intron |
AATACAATAATAACTGAGAA+AGG | 0.438711 | 8_3:+34720873 | None:intergenic |
TGCTTCGTTCCAATCTCGCT+AGG | 0.448612 | 8_3:+34720961 | Msa1286570:CDS |
AGAAATTGGTTCCAGAAGAT+AGG | 0.456451 | 8_3:+34721498 | Msa1286570:CDS |
CTCCTTACGTTCAGCACCAT+CGG | 0.457531 | 8_3:-34723356 | None:intergenic |
TGGACCTGGTTATACAGGAT+TGG | 0.474300 | 8_3:+34725275 | Msa1286570:CDS |
TGCTTTATGCGCAAATAGAT+CGG | 0.477786 | 8_3:-34721470 | None:intergenic |
GAGCAGTTAGGTACCTTCTC+TGG | 0.489496 | 8_3:-34723176 | None:intergenic |
ACTGATGGAATGATTCTTTG+TGG | 0.494947 | 8_3:+34723523 | Msa1286570:CDS |
CTGATGGAATGATTCTTTGT+GGG | 0.499028 | 8_3:+34723524 | Msa1286570:CDS |
TCGGAAAGGATTACGTTGGT+TGG | 0.499687 | 8_3:+34721426 | Msa1286570:CDS |
TCCAAGACACTATCATCCTC+TGG | 0.503510 | 8_3:-34724501 | None:intergenic |
CACCCTCTTGCTGTAAAGCT+TGG | 0.510174 | 8_3:+34723610 | Msa1286570:CDS |
TGGAATCGAATTCAAGAAAG+TGG | 0.512721 | 8_3:+34725231 | Msa1286570:CDS |
TGTTTCGTGTAGGTCTTGAT+GGG | 0.514346 | 8_3:+34723060 | Msa1286570:intron |
TCCAGAGGATGATAGTGTCT+TGG | 0.518327 | 8_3:+34724500 | Msa1286570:CDS |
TATACAGGATTGGTCAACAT+TGG | 0.520849 | 8_3:+34725285 | Msa1286570:CDS |
AGCCGATGGTGCTGAACGTA+AGG | 0.522162 | 8_3:+34723354 | Msa1286570:CDS |
GGTTGGAATTATGACAAGAC+TGG | 0.523865 | 8_3:+34721443 | Msa1286570:CDS |
GATGAATTTCAGAGGTCAGA+AGG | 0.527016 | 8_3:+34721368 | Msa1286570:intron |
GACGATGATAACCGAAGCGT+TGG | 0.528314 | 8_3:+34720935 | Msa1286570:exon |
CTTTGGCTAAATCTAACTGA+TGG | 0.536278 | 8_3:+34723508 | Msa1286570:CDS |
TTGGTCAAGCTCTCTTTCAG+AGG | 0.537242 | 8_3:-34725193 | None:intergenic |
TTCTCTGGCAATTCGACAGA+AGG | 0.546298 | 8_3:-34723161 | None:intergenic |
GCTTCGTTCCAATCTCGCTA+GGG | 0.546683 | 8_3:+34720962 | Msa1286570:CDS |
AAATGCGATTGGTAGGTTCA+GGG | 0.549022 | 8_3:-34720992 | None:intergenic |
GTAAGGAGCAACTTGCAGCT+TGG | 0.549619 | 8_3:+34723371 | Msa1286570:CDS |
ACGAAGCAAATCCAACGCTT+CGG | 0.550712 | 8_3:-34720946 | None:intergenic |
ATACAATAATAACTGAGAAA+GGG | 0.551485 | 8_3:+34720874 | None:intergenic |
TTCGTGCTTGAAAATGCGAT+TGG | 0.555490 | 8_3:-34721003 | None:intergenic |
GCGTTGTTATTCCTCCATCT+GGG | 0.558615 | 8_3:+34723452 | Msa1286570:CDS |
ATTGTCTTTCTTATCACACT+TGG | 0.558797 | 8_3:-34723485 | None:intergenic |
TTGGCACATTTCCACCCAGA+TGG | 0.567451 | 8_3:-34723466 | None:intergenic |
ACTGCTGATCTGGAAGCAGC+AGG | 0.573313 | 8_3:+34723640 | Msa1286570:CDS |
TTCTGTCGAATTGCCAGAGA+AGG | 0.575999 | 8_3:+34723163 | Msa1286570:CDS |
CATTGGAAATAGGTGAGAGT+TGG | 0.577861 | 8_3:+34725302 | Msa1286570:exon |
GTTTCGTGTAGGTCTTGATG+GGG | 0.588680 | 8_3:+34723061 | Msa1286570:intron |
GTGCCAAGCTTTACAGCAAG+AGG | 0.591223 | 8_3:-34723613 | None:intergenic |
TGCTTGAAAATGCGATTGGT+AGG | 0.595745 | 8_3:-34720999 | None:intergenic |
AATTTCAGAGGTCAGAAGGT+GGG | 0.598431 | 8_3:+34721372 | Msa1286570:intron |
GACACTATCATCCTCTGGAT+AGG | 0.601245 | 8_3:-34724496 | None:intergenic |
TTGTTATTCCTCCATCTGGG+TGG | 0.606247 | 8_3:+34723455 | Msa1286570:CDS |
ATACCTACAGCCAATAGTGT+TGG | 0.609740 | 8_3:-34721533 | None:intergenic |
GCACATTTCCACCCAGATGG+AGG | 0.611161 | 8_3:-34723463 | None:intergenic |
CTGTTGTAAACTCACTGCAT+AGG | 0.613715 | 8_3:-34723419 | None:intergenic |
GCTTTCGGAAAGGATTACGT+TGG | 0.616166 | 8_3:+34721422 | Msa1286570:CDS |
TTGCGTTTCTTACGACACTC+CGG | 0.616701 | 8_3:+34721028 | Msa1286570:CDS |
GAATTTCAGAGGTCAGAAGG+TGG | 0.618238 | 8_3:+34721371 | Msa1286570:intron |
GATGCAATCTTACTAGCCGA+TGG | 0.625399 | 8_3:+34723340 | Msa1286570:CDS |
AAACCAACACTATTGGCTGT+AGG | 0.633486 | 8_3:+34721530 | Msa1286570:CDS |
TTGACCAATCCTGTATAACC+AGG | 0.634222 | 8_3:-34725279 | None:intergenic |
TCTCTGGCAATTCGACAGAA+GGG | 0.635011 | 8_3:-34723160 | None:intergenic |
GGAGCAACTTGCAGCTTGGG+CGG | 0.640605 | 8_3:+34723375 | Msa1286570:CDS |
ATGGAATGATTCTTTGTGGG+AGG | 0.642009 | 8_3:+34723527 | Msa1286570:CDS |
TTTCGTGTAGGTCTTGATGG+GGG | 0.655544 | 8_3:+34723062 | Msa1286570:intron |
AATGAAAGAGACACATACTC+AGG | 0.656070 | 8_3:-34723137 | None:intergenic |
AGTTTACAACAGATTGACAA+TGG | 0.656074 | 8_3:+34723430 | Msa1286570:CDS |
TGCCAAGCTTTACAGCAAGA+GGG | 0.664548 | 8_3:-34723612 | None:intergenic |
AGACGTTTACTCCTATCCAG+AGG | 0.709737 | 8_3:+34724485 | Msa1286570:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTCATAATATGAAATAAA+AGG | + | chr8_3:34722561-34722580 | Msa1286570:intron | 10.0% |
!! | ATTCATAATATGAAATAAAA+GGG | + | chr8_3:34722562-34722581 | Msa1286570:intron | 10.0% |
!! | TCATTTATTCAAAATAATTT+AGG | + | chr8_3:34723303-34723322 | Msa1286570:intron | 10.0% |
!!! | ATAAATTTAAATTTTCTTTG+TGG | + | chr8_3:34724393-34724412 | Msa1286570:intron | 10.0% |
!! | TAATTATAAAATTGAGTATT+TGG | + | chr8_3:34724887-34724906 | Msa1286570:intron | 10.0% |
!! | ATTATTAGGTTATATGATAA+AGG | + | chr8_3:34721686-34721705 | Msa1286570:intron | 15.0% |
!! | TTATTAGGTTATATGATAAA+GGG | + | chr8_3:34721687-34721706 | Msa1286570:intron | 15.0% |
!! | AGAATTGAATTCAAATAAAA+GGG | - | chr8_3:34721967-34721986 | None:intergenic | 15.0% |
!! | AAGAATTGAATTCAAATAAA+AGG | - | chr8_3:34721968-34721987 | None:intergenic | 15.0% |
!! | TTTATTTGAATTCAATTCTT+TGG | + | chr8_3:34721968-34721987 | Msa1286570:intron | 15.0% |
!! | TTTAGTATTAAACTTATTAG+TGG | - | chr8_3:34722481-34722500 | None:intergenic | 15.0% |
!! | TATTCAAAATAATTTAGGTA+AGG | + | chr8_3:34723308-34723327 | Msa1286570:intron | 15.0% |
!! | TATGAAAAAATATAAGACAT+CGG | - | chr8_3:34723759-34723778 | None:intergenic | 15.0% |
!!! | TTTTCATATTTGTATATCAT+CGG | + | chr8_3:34723771-34723790 | Msa1286570:intron | 15.0% |
!! | AAAAATTTAATTATCAATGC+CGG | + | chr8_3:34723878-34723897 | Msa1286570:intron | 15.0% |
!! | GGAATAAATTGAAAAATATA+AGG | + | chr8_3:34723928-34723947 | Msa1286570:intron | 15.0% |
!!! | ATTTTTAGTAATTTTAAGCT+TGG | + | chr8_3:34724009-34724028 | Msa1286570:intron | 15.0% |
!!! | TGTTATTAAGCTTTTAAAAT+GGG | - | chr8_3:34724249-34724268 | None:intergenic | 15.0% |
!!! | TTGTTATTAAGCTTTTAAAA+TGG | - | chr8_3:34724250-34724269 | None:intergenic | 15.0% |
!! | TAATTATCCTTATTGTATTA+TGG | + | chr8_3:34724456-34724475 | Msa1286570:intron | 15.0% |
!! | ATTATCAGAAAACAAAATAA+TGG | - | chr8_3:34724871-34724890 | None:intergenic | 15.0% |
!! | CAAATCTAAACAAAATAATA+TGG | - | chr8_3:34724994-34725013 | None:intergenic | 15.0% |
!!! | TTATCTCTCCTTATTTATTA+TGG | + | chr8_3:34721292-34721311 | Msa1286570:intron | 20.0% |
!!! | TTATTTTTGATGAATTTCAG+AGG | + | chr8_3:34721360-34721379 | Msa1286570:intron | 20.0% |
!! | AAAGCACATTATAATCTTAA+TGG | - | chr8_3:34721580-34721599 | None:intergenic | 20.0% |
!! | TCATATAACCTAATAATTGT+GGG | - | chr8_3:34721683-34721702 | None:intergenic | 20.0% |
!! | ATCATATAACCTAATAATTG+TGG | - | chr8_3:34721684-34721703 | None:intergenic | 20.0% |
!! | TATTAGGTTATATGATAAAG+GGG | + | chr8_3:34721688-34721707 | Msa1286570:intron | 20.0% |
!! | TAGGATTATCTTGTATAAAT+AGG | + | chr8_3:34721840-34721859 | Msa1286570:intron | 20.0% |
!! | AGGATTATCTTGTATAAATA+GGG | + | chr8_3:34721841-34721860 | Msa1286570:intron | 20.0% |
!! | GAATTGAATTCAAATAAAAG+GGG | - | chr8_3:34721966-34721985 | None:intergenic | 20.0% |
!!! | AAAGTTAATTAGAAAGTATG+AGG | - | chr8_3:34722051-34722070 | None:intergenic | 20.0% |
!!! | GTATTTCTTTTTGAATAGTA+TGG | - | chr8_3:34722506-34722525 | None:intergenic | 20.0% |
!! | TGTCAAAATCTCAAAATATT+TGG | - | chr8_3:34723034-34723053 | None:intergenic | 20.0% |
!! | TCTCTTTAATTAATAAAAGG+GGG | - | chr8_3:34723224-34723243 | None:intergenic | 20.0% |
!! | GTCTCTTTAATTAATAAAAG+GGG | - | chr8_3:34723225-34723244 | None:intergenic | 20.0% |
!! | CGTCTCTTTAATTAATAAAA+GGG | - | chr8_3:34723226-34723245 | None:intergenic | 20.0% |
!! | ACGTCTCTTTAATTAATAAA+AGG | - | chr8_3:34723227-34723246 | None:intergenic | 20.0% |
!! | AATACAGAACAGAAATTTAA+CGG | - | chr8_3:34723820-34723839 | None:intergenic | 20.0% |
!!! | AGCAAAATATGTCTTTAAAA+TGG | - | chr8_3:34724074-34724093 | None:intergenic | 20.0% |
!!! | TTTTTTTATTTGAGCTTCAA+CGG | + | chr8_3:34724276-34724295 | Msa1286570:intron | 20.0% |
!!! | TTAGTTCAAATTATTTGTTG+AGG | - | chr8_3:34724373-34724392 | None:intergenic | 20.0% |
!!! | ATTGAGTTTTAAGTTTTAAC+CGG | - | chr8_3:34724699-34724718 | None:intergenic | 20.0% |
!! | GTCACTTGATATATAATTTA+TGG | - | chr8_3:34725127-34725146 | None:intergenic | 20.0% |
!!! | ACCAAAATACAAATTTTGAT+TGG | + | chr8_3:34725211-34725230 | Msa1286570:CDS | 20.0% |
!!! | TCCAATCAAAATTTGTATTT+TGG | - | chr8_3:34725215-34725234 | None:intergenic | 20.0% |
! | TGAATTAATTGAACGTTGAT+CGG | - | chr8_3:34721064-34721083 | None:intergenic | 25.0% |
! | ATAGCCAACCATAATAAATA+AGG | - | chr8_3:34721303-34721322 | None:intergenic | 25.0% |
! | GTGATACTATAGAAGAAAAA+TGG | + | chr8_3:34721600-34721619 | Msa1286570:intron | 25.0% |
! | ATTATCTTGTATAAATAGGG+AGG | + | chr8_3:34721844-34721863 | Msa1286570:intron | 25.0% |
! | AGTAGTGACTATTGTAAAAT+TGG | + | chr8_3:34721918-34721937 | Msa1286570:intron | 25.0% |
!! | TTTTGTAAAGGGTTTTTGTT+TGG | - | chr8_3:34721996-34722015 | None:intergenic | 25.0% |
! | TGATAACAAGAGATTATAGA+GGG | - | chr8_3:34722028-34722047 | None:intergenic | 25.0% |
! | TGATCAGATTATTGAAGATA+CGG | + | chr8_3:34722257-34722276 | Msa1286570:intron | 25.0% |
! | TGAAATTTGAGTAATGTCTA+AGG | - | chr8_3:34722536-34722555 | None:intergenic | 25.0% |
! | TTAGACATTACTCAAATTTC+AGG | + | chr8_3:34722535-34722554 | Msa1286570:intron | 25.0% |
!! | GCGATTTTCATGTTTATAAT+TGG | - | chr8_3:34722613-34722632 | None:intergenic | 25.0% |
!! | ACAATAACTTGTACTAGTAT+TGG | - | chr8_3:34722641-34722660 | None:intergenic | 25.0% |
!!! | GTTATTGTTTTACTATTGCT+AGG | + | chr8_3:34722653-34722672 | Msa1286570:intron | 25.0% |
! | ATATGCTGTAAATAACAGTA+AGG | - | chr8_3:34722804-34722823 | None:intergenic | 25.0% |
! | AATGAAAGAGACATATATTC+AGG | - | chr8_3:34722987-34723006 | None:intergenic | 25.0% |
! | TTACAAACTGTATGCAAAAT+GGG | - | chr8_3:34723711-34723730 | None:intergenic | 25.0% |
! | ATTACAAACTGTATGCAAAA+TGG | - | chr8_3:34723712-34723731 | None:intergenic | 25.0% |
! | ATTTATTCCTCTGTTTCATA+TGG | - | chr8_3:34723917-34723936 | None:intergenic | 25.0% |
!!! | AGTGTTTAATTTGAATTGTG+AGG | + | chr8_3:34724140-34724159 | Msa1286570:intron | 25.0% |
!!! | TTTAATTTGAATTGTGAGGA+GGG | + | chr8_3:34724144-34724163 | Msa1286570:intron | 25.0% |
! | AATGGGTAAATGTTAATTGT+TGG | - | chr8_3:34724232-34724251 | None:intergenic | 25.0% |
!! | TTTTCTTTGTGGAGTAAATA+TGG | + | chr8_3:34724404-34724423 | Msa1286570:intron | 25.0% |
! | TCCAAATTTAGCAAAACATT+TGG | + | chr8_3:34724524-34724543 | Msa1286570:CDS | 25.0% |
!!! | TTGATAATGTTGAGATTAGA+TGG | + | chr8_3:34724798-34724817 | Msa1286570:intron | 25.0% |
!! | TGATAATGTTGAGATTAGAT+GGG | + | chr8_3:34724799-34724818 | Msa1286570:intron | 25.0% |
! | TCTAAACAAAATAATATGGC+CGG | - | chr8_3:34724990-34725009 | None:intergenic | 25.0% |
TTCAGTGTAATTACAAGTGT+CGG | - | chr8_3:34721158-34721177 | None:intergenic | 30.0% | |
TTTCAAATTATCAGCTGTGT+CGG | + | chr8_3:34721189-34721208 | Msa1286570:intron | 30.0% | |
! | CTCTCCTTATTTATTATGGT+TGG | + | chr8_3:34721296-34721315 | Msa1286570:intron | 30.0% |
! | TTGAACACTTTTCTTGCTTT+CGG | + | chr8_3:34721407-34721426 | Msa1286570:CDS | 30.0% |
CATAAAGCAGACAAAGAAAT+TGG | + | chr8_3:34721484-34721503 | Msa1286570:CDS | 30.0% | |
!! | AATAGTGTTGGTTTCTTAGA+AGG | - | chr8_3:34721524-34721543 | None:intergenic | 30.0% |
! | TTCTAAGAAACCAACACTAT+TGG | + | chr8_3:34721523-34721542 | Msa1286570:CDS | 30.0% |
TATGTGAATCAAGTCATTCT+TGG | + | chr8_3:34721553-34721572 | Msa1286570:intron | 30.0% | |
GATTGTTAGGATTCAAGATA+AGG | + | chr8_3:34721712-34721731 | Msa1286570:intron | 30.0% | |
ATTCAAGATAAGGAGTTAGT+TGG | + | chr8_3:34721722-34721741 | Msa1286570:intron | 30.0% | |
TTCAAGATAAGGAGTTAGTT+GGG | + | chr8_3:34721723-34721742 | Msa1286570:intron | 30.0% | |
TTGGGGAAGTTATTAGTTAA+TGG | + | chr8_3:34721741-34721760 | Msa1286570:intron | 30.0% | |
TGGGGAAGTTATTAGTTAAT+GGG | + | chr8_3:34721742-34721761 | Msa1286570:intron | 30.0% | |
GTGATAACAAGAGATTATAG+AGG | - | chr8_3:34722029-34722048 | None:intergenic | 30.0% | |
! | AAAATACTTTGAGAGCAGAT+GGG | - | chr8_3:34722085-34722104 | None:intergenic | 30.0% |
! | TAAAATACTTTGAGAGCAGA+TGG | - | chr8_3:34722086-34722105 | None:intergenic | 30.0% |
CTGATCAAGAATCTATCAAT+TGG | - | chr8_3:34722244-34722263 | None:intergenic | 30.0% | |
AGATACGGAATATTAACTGA+TGG | + | chr8_3:34722272-34722291 | Msa1286570:intron | 30.0% | |
AAATAACAGTAAGGAGACTA+TGG | - | chr8_3:34722795-34722814 | None:intergenic | 30.0% | |
! | AAAGTTAGTTAGAAAGTGTG+AGG | - | chr8_3:34722829-34722848 | None:intergenic | 30.0% |
! | AAGAGCACAAAATAACTGAT+AGG | - | chr8_3:34722883-34722902 | None:intergenic | 30.0% |
AAGTAGAATATTCGACAGAA+GGG | - | chr8_3:34723010-34723029 | None:intergenic | 30.0% | |
TAAGTAGAATATTCGACAGA+AGG | - | chr8_3:34723011-34723030 | None:intergenic | 30.0% | |
CTATGAGTTTCTTCATATTC+AGG | - | chr8_3:34722951-34722970 | None:intergenic | 30.0% | |
CAAAATAATTTAGGTAAGGC+TGG | + | chr8_3:34723312-34723331 | Msa1286570:intron | 30.0% | |
AGTTTACAACAGATTGACAA+TGG | + | chr8_3:34723430-34723449 | Msa1286570:CDS | 30.0% | |
ATTGTCTTTCTTATCACACT+TGG | - | chr8_3:34723488-34723507 | None:intergenic | 30.0% | |
GTGATAAGAAAGACAATCTT+TGG | + | chr8_3:34723491-34723510 | Msa1286570:CDS | 30.0% | |
ATATGGAATTACTCTTTCAC+CGG | - | chr8_3:34723900-34723919 | None:intergenic | 30.0% | |
AGTAATTCCATATGAAACAG+AGG | + | chr8_3:34723907-34723926 | Msa1286570:intron | 30.0% | |
!! | GTTTAATTTGAATTGTGAGG+AGG | + | chr8_3:34724143-34724162 | Msa1286570:intron | 30.0% |
!!! | TTGGTGGTTATTTTTACAGT+GGG | - | chr8_3:34724213-34724232 | None:intergenic | 30.0% |
AGGATAATTAGTACATAGTG+AGG | - | chr8_3:34724446-34724465 | None:intergenic | 30.0% | |
! | GCCAAATGTTTTGCTAAATT+TGG | - | chr8_3:34724528-34724547 | None:intergenic | 30.0% |
TGAAAAGTCAATGCCAAAAA+AGG | - | chr8_3:34724550-34724569 | None:intergenic | 30.0% | |
GTATTTAATCCAGCAAACAA+GGG | - | chr8_3:34724758-34724777 | None:intergenic | 30.0% | |
AGTATTTAATCCAGCAAACA+AGG | - | chr8_3:34724759-34724778 | None:intergenic | 30.0% | |
!! | CAAGAAGTTGATCCAATTTT+TGG | + | chr8_3:34725255-34725274 | Msa1286570:CDS | 30.0% |
GTTGATCGGAAAATGATTAC+CGG | - | chr8_3:34721050-34721069 | None:intergenic | 35.0% | |
TGCTTTATGCGCAAATAGAT+CGG | - | chr8_3:34721473-34721492 | None:intergenic | 35.0% | |
! | AGAAATTGGTTCCAGAAGAT+AGG | + | chr8_3:34721498-34721517 | Msa1286570:CDS | 35.0% |
ATGATAAAGGGGAGATTGTT+AGG | + | chr8_3:34721699-34721718 | Msa1286570:intron | 35.0% | |
TCAAGATAAGGAGTTAGTTG+GGG | + | chr8_3:34721724-34721743 | Msa1286570:intron | 35.0% | |
GGGGAAGTTATTAGTTAATG+GGG | + | chr8_3:34721743-34721762 | Msa1286570:intron | 35.0% | |
!!! | AGGTTTTCGAGTTAGAGAAA+TGG | + | chr8_3:34721864-34721883 | Msa1286570:intron | 35.0% |
GAATTCAAATAAAAGGGGCT+CGG | - | chr8_3:34721961-34721980 | None:intergenic | 35.0% | |
!!! | GGCATCTTTGGTTTTGTAAA+GGG | - | chr8_3:34722007-34722026 | None:intergenic | 35.0% |
GAGTGCATGTTGAAAAATTC+AGG | - | chr8_3:34722191-34722210 | None:intergenic | 35.0% | |
ATGTTGTCAATGTGGAAATG+CGG | + | chr8_3:34722381-34722400 | Msa1286570:intron | 35.0% | |
AATGAAAGAGACACATACTC+AGG | - | chr8_3:34723140-34723159 | None:intergenic | 35.0% | |
AAAACTACAAGAGAGCAGTT+AGG | - | chr8_3:34723191-34723210 | None:intergenic | 35.0% | |
CTTTGGCTAAATCTAACTGA+TGG | + | chr8_3:34723508-34723527 | Msa1286570:CDS | 35.0% | |
ACTGATGGAATGATTCTTTG+TGG | + | chr8_3:34723523-34723542 | Msa1286570:CDS | 35.0% | |
CTGATGGAATGATTCTTTGT+GGG | + | chr8_3:34723524-34723543 | Msa1286570:CDS | 35.0% | |
CAAAACAATATGAAGCAAGG+GGG | - | chr8_3:34723671-34723690 | None:intergenic | 35.0% | |
CCAAAACAATATGAAGCAAG+GGG | - | chr8_3:34723672-34723691 | None:intergenic | 35.0% | |
GCCAAAACAATATGAAGCAA+GGG | - | chr8_3:34723673-34723692 | None:intergenic | 35.0% | |
AGCCAAAACAATATGAAGCA+AGG | - | chr8_3:34723674-34723693 | None:intergenic | 35.0% | |
AAACTGTATGCAAAATGGGT+AGG | - | chr8_3:34723707-34723726 | None:intergenic | 35.0% | |
TGTAATCATGACTTTCTCTC+AGG | + | chr8_3:34723726-34723745 | Msa1286570:intron | 35.0% | |
!! | GTTCTGTATTTTTGCTACTG+TGG | + | chr8_3:34723830-34723849 | Msa1286570:intron | 35.0% |
!! | TATTTTTGCTACTGTGGCAA+TGG | + | chr8_3:34723836-34723855 | Msa1286570:intron | 35.0% |
! | ATTTTTGCTACTGTGGCAAT+GGG | + | chr8_3:34723837-34723856 | Msa1286570:intron | 35.0% |
GATTCACTATACATTCTGCA+TGG | + | chr8_3:34724031-34724050 | Msa1286570:intron | 35.0% | |
GTGTTTGACTCATCTTTATC+TGG | + | chr8_3:34724099-34724118 | Msa1286570:intron | 35.0% | |
!!! | GTTGGTGGTTATTTTTACAG+TGG | - | chr8_3:34724214-34724233 | None:intergenic | 35.0% |
GGGTAAATGTTAATTGTTGG+TGG | - | chr8_3:34724229-34724248 | None:intergenic | 35.0% | |
TGAGCTGCCATAATACAATA+AGG | - | chr8_3:34724466-34724485 | None:intergenic | 35.0% | |
!!! | GCAAAACATTTGGCCTTTTT+TGG | + | chr8_3:34724534-34724553 | Msa1286570:CDS | 35.0% |
! | TGACTTTTCATCGCTTCAAA+AGG | + | chr8_3:34724560-34724579 | Msa1286570:CDS | 35.0% |
AATGATATCGCTTTCCTTCA+TGG | + | chr8_3:34724599-34724618 | Msa1286570:intron | 35.0% | |
ATGATATCGCTTTCCTTCAT+GGG | + | chr8_3:34724600-34724619 | Msa1286570:intron | 35.0% | |
TTATGATATCGCTTTCCTGT+TGG | + | chr8_3:34724731-34724750 | Msa1286570:intron | 35.0% | |
TAGCATTTCTCAACGATCTA+TGG | + | chr8_3:34724822-34724841 | Msa1286570:intron | 35.0% | |
AAGAGCTTAAGATGTTATGC+CGG | + | chr8_3:34724968-34724987 | Msa1286570:intron | 35.0% | |
! | CTTCAGAAGCTAGTTTAGTT+TGG | - | chr8_3:34725036-34725055 | None:intergenic | 35.0% |
! | TTTTGTCTTTCTACTCTGCT+AGG | + | chr8_3:34725082-34725101 | Msa1286570:intron | 35.0% |
TGGAATCGAATTCAAGAAAG+TGG | + | chr8_3:34725231-34725250 | Msa1286570:CDS | 35.0% | |
GTATAACCAGGTCCAAAAAT+TGG | - | chr8_3:34725270-34725289 | None:intergenic | 35.0% | |
!! | ATTTTTGGACCTGGTTATAC+AGG | + | chr8_3:34725270-34725289 | Msa1286570:CDS | 35.0% |
!! | TATACAGGATTGGTCAACAT+TGG | + | chr8_3:34725285-34725304 | Msa1286570:CDS | 35.0% |
! | GATTGGTCAACATTGGAAAT+AGG | + | chr8_3:34725292-34725311 | Msa1286570:CDS | 35.0% |
AAATGCGATTGGTAGGTTCA+GGG | - | chr8_3:34720995-34721014 | None:intergenic | 40.0% | |
AAAATGCGATTGGTAGGTTC+AGG | - | chr8_3:34720996-34721015 | None:intergenic | 40.0% | |
TGCTTGAAAATGCGATTGGT+AGG | - | chr8_3:34721002-34721021 | None:intergenic | 40.0% | |
TTCGTGCTTGAAAATGCGAT+TGG | - | chr8_3:34721006-34721025 | None:intergenic | 40.0% | |
TATCCGTGCTTCATAAGTGT+CGG | + | chr8_3:34721220-34721239 | Msa1286570:intron | 40.0% | |
GATGAATTTCAGAGGTCAGA+AGG | + | chr8_3:34721368-34721387 | Msa1286570:intron | 40.0% | |
AATTTCAGAGGTCAGAAGGT+GGG | + | chr8_3:34721372-34721391 | Msa1286570:intron | 40.0% | |
! | CACTTTTCTTGCTTTCGGAA+AGG | + | chr8_3:34721412-34721431 | Msa1286570:CDS | 40.0% |
GGTTGGAATTATGACAAGAC+TGG | + | chr8_3:34721443-34721462 | Msa1286570:CDS | 40.0% | |
TTCTTAGAAGGCCTATCTTC+TGG | - | chr8_3:34721512-34721531 | None:intergenic | 40.0% | |
! | AAACCAACACTATTGGCTGT+AGG | + | chr8_3:34721530-34721549 | Msa1286570:CDS | 40.0% |
ATACCTACAGCCAATAGTGT+TGG | - | chr8_3:34721536-34721555 | None:intergenic | 40.0% | |
GATTCTCGCCCACAATTATT+AGG | + | chr8_3:34721672-34721691 | Msa1286570:intron | 40.0% | |
! | GCTTGGTTGTTGTTGTTGTT+GGG | + | chr8_3:34721812-34721831 | Msa1286570:intron | 40.0% |
! | CTTGGTTGTTGTTGTTGTTG+GGG | + | chr8_3:34721813-34721832 | Msa1286570:intron | 40.0% |
! | TTGTTGTTGTTGGGGTAGTT+AGG | + | chr8_3:34721821-34721840 | Msa1286570:intron | 40.0% |
!!! | GGGCATCTTTGGTTTTGTAA+AGG | - | chr8_3:34722008-34722027 | None:intergenic | 40.0% |
!! | GAGATTATAGAGGGCATCTT+TGG | - | chr8_3:34722019-34722038 | None:intergenic | 40.0% |
ACATTCAGCAAGGTGTATCA+AGG | - | chr8_3:34722159-34722178 | None:intergenic | 40.0% | |
GTAAAACTAAAGTACACCGC+AGG | + | chr8_3:34722294-34722313 | Msa1286570:intron | 40.0% | |
!! | GTATCCTGCGGTTTTGTAAA+GGG | - | chr8_3:34722350-34722369 | None:intergenic | 40.0% |
!! | AGTATCCTGCGGTTTTGTAA+AGG | - | chr8_3:34722351-34722370 | None:intergenic | 40.0% |
CCACATTGACAACATAGCTA+TGG | - | chr8_3:34722376-34722395 | None:intergenic | 40.0% | |
CCATAGCTATGTTGTCAATG+TGG | + | chr8_3:34722373-34722392 | Msa1286570:intron | 40.0% | |
TAACCCACCAACTAAACTAG+TGG | + | chr8_3:34722852-34722871 | Msa1286570:intron | 40.0% | |
AACCCACCAACTAAACTAGT+GGG | + | chr8_3:34722853-34722872 | Msa1286570:intron | 40.0% | |
GACAATCAGATGTTTCGTGT+AGG | + | chr8_3:34723050-34723069 | Msa1286570:intron | 40.0% | |
ATGTTTCGTGTAGGTCTTGA+TGG | + | chr8_3:34723059-34723078 | Msa1286570:intron | 40.0% | |
TGTTTCGTGTAGGTCTTGAT+GGG | + | chr8_3:34723060-34723079 | Msa1286570:intron | 40.0% | |
CTGTTGTAAACTCACTGCAT+AGG | - | chr8_3:34723422-34723441 | None:intergenic | 40.0% | |
ATGGAATGATTCTTTGTGGG+AGG | + | chr8_3:34723527-34723546 | Msa1286570:CDS | 40.0% | |
TTCTTTGTGGGAGGAAAAAC+TGG | + | chr8_3:34723536-34723555 | Msa1286570:CDS | 40.0% | |
TCTTTGTGGGAGGAAAAACT+GGG | + | chr8_3:34723537-34723556 | Msa1286570:CDS | 40.0% | |
! | CCCCTTGCTTCATATTGTTT+TGG | + | chr8_3:34723669-34723688 | Msa1286570:intron | 40.0% |
! | TTGTATATCATCGGCACTGA+TGG | + | chr8_3:34723780-34723799 | Msa1286570:intron | 40.0% |
!! | TGTATATCATCGGCACTGAT+GGG | + | chr8_3:34723781-34723800 | Msa1286570:intron | 40.0% |
AATACAAACCTGCACAGAGT+GGG | + | chr8_3:34723952-34723971 | Msa1286570:intron | 40.0% | |
!!! | GTGGTTATTTTTACAGTGGG+AGG | - | chr8_3:34724210-34724229 | None:intergenic | 40.0% |
ATGCCCTTGAGCAAAACATT+TGG | + | chr8_3:34724641-34724660 | Msa1286570:intron | 40.0% | |
! | AGGCCAAATGTTTTGCTCAA+GGG | - | chr8_3:34724647-34724666 | None:intergenic | 40.0% |
!! | TGCACTTGTTGACTTTATGC+CGG | + | chr8_3:34724677-34724696 | Msa1286570:intron | 40.0% |
!! | GTTGATCCAATTTTTGGACC+TGG | + | chr8_3:34725261-34725280 | Msa1286570:CDS | 40.0% |
TTGACCAATCCTGTATAACC+AGG | - | chr8_3:34725282-34725301 | None:intergenic | 40.0% | |
CATTGGAAATAGGTGAGAGT+TGG | + | chr8_3:34725302-34725321 | Msa1286570:exon | 40.0% | |
ACGAAGCAAATCCAACGCTT+CGG | - | chr8_3:34720949-34720968 | None:intergenic | 45.0% | |
TTGCGTTTCTTACGACACTC+CGG | + | chr8_3:34721028-34721047 | Msa1286570:CDS | 45.0% | |
!! | CTTCATAAGTGTCGGTGCTT+CGG | + | chr8_3:34721228-34721247 | Msa1286570:intron | 45.0% |
GAATTTCAGAGGTCAGAAGG+TGG | + | chr8_3:34721371-34721390 | Msa1286570:intron | 45.0% | |
GCTTTCGGAAAGGATTACGT+TGG | + | chr8_3:34721422-34721441 | Msa1286570:CDS | 45.0% | |
TCGGAAAGGATTACGTTGGT+TGG | + | chr8_3:34721426-34721445 | Msa1286570:CDS | 45.0% | |
GAAAGACAGAAGAACACTGC+AGG | + | chr8_3:34721635-34721654 | Msa1286570:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr8_3:34721796-34721815 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr8_3:34721797-34721816 | None:intergenic | 45.0% |
! | GGCTTGGTTGTTGTTGTTGT+TGG | + | chr8_3:34721811-34721830 | Msa1286570:intron | 45.0% |
! | GTGCTGTTCAACATTCAGCA+AGG | - | chr8_3:34722169-34722188 | None:intergenic | 45.0% |
AGCTCCAATCTTGGAGCTAT+GGG | - | chr8_3:34722215-34722234 | None:intergenic | 45.0% | |
! | TGGTGTTAGAGCTCCAATCT+TGG | - | chr8_3:34722224-34722243 | None:intergenic | 45.0% |
CCAGGTCTTTCAAATACCTG+CGG | - | chr8_3:34722313-34722332 | None:intergenic | 45.0% | |
CTAACCCTTTACAAAACCGC+AGG | + | chr8_3:34722343-34722362 | Msa1286570:intron | 45.0% | |
!! | TAGCTATGGAGAGTATCCTG+CGG | - | chr8_3:34722362-34722381 | None:intergenic | 45.0% |
CTATGGAGCTCTGTTCTCAA+AGG | - | chr8_3:34722778-34722797 | None:intergenic | 45.0% | |
ACCCACCAACTAAACTAGTG+GGG | + | chr8_3:34722854-34722873 | Msa1286570:intron | 45.0% | |
! | ACCCCACTAGTTTAGTTGGT+GGG | - | chr8_3:34722858-34722877 | None:intergenic | 45.0% |
! | AACCCCACTAGTTTAGTTGG+TGG | - | chr8_3:34722859-34722878 | None:intergenic | 45.0% |
! | GGTAACCCCACTAGTTTAGT+TGG | - | chr8_3:34722862-34722881 | None:intergenic | 45.0% |
GTTTCGTGTAGGTCTTGATG+GGG | + | chr8_3:34723061-34723080 | Msa1286570:intron | 45.0% | |
TTTCGTGTAGGTCTTGATGG+GGG | + | chr8_3:34723062-34723081 | Msa1286570:intron | 45.0% | |
TCTCTGGCAATTCGACAGAA+GGG | - | chr8_3:34723163-34723182 | None:intergenic | 45.0% | |
TTCTCTGGCAATTCGACAGA+AGG | - | chr8_3:34723164-34723183 | None:intergenic | 45.0% | |
TTCTGTCGAATTGCCAGAGA+AGG | + | chr8_3:34723163-34723182 | Msa1286570:CDS | 45.0% | |
AGAGACGTTGTAAGCTGCAA+AGG | + | chr8_3:34723239-34723258 | Msa1286570:intron | 45.0% | |
GATGCAATCTTACTAGCCGA+TGG | + | chr8_3:34723340-34723359 | Msa1286570:CDS | 45.0% | |
TAAGGAGCAACTTGCAGCTT+GGG | + | chr8_3:34723372-34723391 | Msa1286570:CDS | 45.0% | |
! | GCGTTGTTATTCCTCCATCT+GGG | + | chr8_3:34723452-34723471 | Msa1286570:CDS | 45.0% |
! | TTGTTATTCCTCCATCTGGG+TGG | + | chr8_3:34723455-34723474 | Msa1286570:CDS | 45.0% |
AGGAAAAACTGGGATGGAAG+TGG | + | chr8_3:34723547-34723566 | Msa1286570:CDS | 45.0% | |
AAAAACTGGGATGGAAGTGG+TGG | + | chr8_3:34723550-34723569 | Msa1286570:CDS | 45.0% | |
TGCCAAGCTTTACAGCAAGA+GGG | - | chr8_3:34723615-34723634 | None:intergenic | 45.0% | |
TGGCACTATTACTGCTGATC+TGG | + | chr8_3:34723630-34723649 | Msa1286570:CDS | 45.0% | |
!! | GTATATCATCGGCACTGATG+GGG | + | chr8_3:34723782-34723801 | Msa1286570:intron | 45.0% |
CAATACAAACCTGCACAGAG+TGG | + | chr8_3:34723951-34723970 | Msa1286570:intron | 45.0% | |
GGTGTGGGGTTCAAATAAAC+TGG | + | chr8_3:34723982-34724001 | Msa1286570:intron | 45.0% | |
AATTGTGAGGAGGGATACAG+TGG | + | chr8_3:34724153-34724172 | Msa1286570:intron | 45.0% | |
ATACAGTGGTTGGAGTGACA+AGG | + | chr8_3:34724167-34724186 | Msa1286570:intron | 45.0% | |
AGACGTTTACTCCTATCCAG+AGG | + | chr8_3:34724485-34724504 | Msa1286570:intron | 45.0% | |
GACACTATCATCCTCTGGAT+AGG | - | chr8_3:34724499-34724518 | None:intergenic | 45.0% | |
! | TCCAGAGGATGATAGTGTCT+TGG | + | chr8_3:34724500-34724519 | Msa1286570:CDS | 45.0% |
TCCAAGACACTATCATCCTC+TGG | - | chr8_3:34724504-34724523 | None:intergenic | 45.0% | |
! | CTCAAGGGCATAAAGCTCAA+GGG | - | chr8_3:34724632-34724651 | None:intergenic | 45.0% |
! | GAGGCCAAATGTTTTGCTCA+AGG | - | chr8_3:34724648-34724667 | None:intergenic | 45.0% |
AACAAGTGCAGGTCTCATAG+AGG | - | chr8_3:34724667-34724686 | None:intergenic | 45.0% | |
GGCATAAAGTCAACAAGTGC+AGG | - | chr8_3:34724678-34724697 | None:intergenic | 45.0% | |
!! | CTATGGCTTGCTACTTGTGT+TGG | + | chr8_3:34724839-34724858 | Msa1286570:intron | 45.0% |
TTGGTCAAGCTCTCTTTCAG+AGG | - | chr8_3:34725196-34725215 | None:intergenic | 45.0% | |
TGGACCTGGTTATACAGGAT+TGG | + | chr8_3:34725275-34725294 | Msa1286570:CDS | 45.0% | |
GACGATGATAACCGAAGCGT+TGG | + | chr8_3:34720935-34720954 | Msa1286570:exon | 50.0% | |
TGCTTCGTTCCAATCTCGCT+AGG | + | chr8_3:34720961-34720980 | Msa1286570:CDS | 50.0% | |
GCTTCGTTCCAATCTCGCTA+GGG | + | chr8_3:34720962-34720981 | Msa1286570:CDS | 50.0% | |
GTTCCAATCTCGCTAGGGTT+CGG | + | chr8_3:34720967-34720986 | Msa1286570:CDS | 50.0% | |
!! | TACAAGTGTCGGTGTCGTGT+CGG | - | chr8_3:34721147-34721166 | None:intergenic | 50.0% |
! | GCACCGACACTTATGAAGCA+CGG | - | chr8_3:34721226-34721245 | None:intergenic | 50.0% |
CTTATCCCACTAAGTGGGGT+CGG | - | chr8_3:34721792-34721811 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr8_3:34721798-34721817 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | chr8_3:34721795-34721814 | Msa1286570:intron | 50.0% | |
GGGGCTCGGAAATCTAACAA+GGG | - | chr8_3:34721947-34721966 | None:intergenic | 50.0% | |
AGGGGCTCGGAAATCTAACA+AGG | - | chr8_3:34721948-34721967 | None:intergenic | 50.0% | |
CTCCAATCTTGGAGCTATGG+GGG | - | chr8_3:34722213-34722232 | None:intergenic | 50.0% | |
GCTCCAATCTTGGAGCTATG+GGG | - | chr8_3:34722214-34722233 | None:intergenic | 50.0% | |
GAGCTCCAATCTTGGAGCTA+TGG | - | chr8_3:34722216-34722235 | None:intergenic | 50.0% | |
CCGCAGGTATTTGAAAGACC+TGG | + | chr8_3:34722310-34722329 | Msa1286570:intron | 50.0% | |
AGGGTTAGAGTGAGAGAACC+AGG | - | chr8_3:34722331-34722350 | None:intergenic | 50.0% | |
GTCAATGTGGAAATGCGGCT+CGG | + | chr8_3:34722386-34722405 | Msa1286570:intron | 50.0% | |
!!! | TGCCACGCCAATTTTTGGGT+TGG | - | chr8_3:34722417-34722436 | None:intergenic | 50.0% |
ACCCAAAAATTGGCGTGGCA+CGG | + | chr8_3:34722417-34722436 | Msa1286570:intron | 50.0% | |
! | CGGAGCGTAGCGGAAAAATA+CGG | - | chr8_3:34722734-34722753 | None:intergenic | 50.0% |
GAGCAGTTAGGTACCTTCTC+TGG | - | chr8_3:34723179-34723198 | None:intergenic | 50.0% | |
CTCCTTACGTTCAGCACCAT+CGG | - | chr8_3:34723359-34723378 | None:intergenic | 50.0% | |
GTAAGGAGCAACTTGCAGCT+TGG | + | chr8_3:34723371-34723390 | Msa1286570:CDS | 50.0% | |
! | GGCGTTGTTATTCCTCCATC+TGG | + | chr8_3:34723451-34723470 | Msa1286570:CDS | 50.0% |
TTGGCACATTTCCACCCAGA+TGG | - | chr8_3:34723469-34723488 | None:intergenic | 50.0% | |
TGTGGGAGGAAAAACTGGGA+TGG | + | chr8_3:34723541-34723560 | Msa1286570:CDS | 50.0% | |
! | CACCCTCTTGCTGTAAAGCT+TGG | + | chr8_3:34723610-34723629 | Msa1286570:CDS | 50.0% |
GTGCCAAGCTTTACAGCAAG+AGG | - | chr8_3:34723616-34723635 | None:intergenic | 50.0% | |
TCGCTTTCCTTCATGGGACA+CGG | + | chr8_3:34724606-34724625 | Msa1286570:intron | 50.0% | |
! | GCTCAAGGGCATAAAGCTCA+AGG | - | chr8_3:34724633-34724652 | None:intergenic | 50.0% |
GATCCGAACCCTAGCGAGAT+TGG | - | chr8_3:34720973-34720992 | None:intergenic | 55.0% | |
GTGTCGGACAACACAGACAC+AGG | - | chr8_3:34721131-34721150 | None:intergenic | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr8_3:34721784-34721803 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr8_3:34721783-34721802 | Msa1286570:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr8_3:34721784-34721803 | Msa1286570:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr8_3:34721790-34721809 | Msa1286570:intron | 55.0% | |
CTCCCCCATAGCTCCAAGAT+TGG | + | chr8_3:34722208-34722227 | Msa1286570:intron | 55.0% | |
GGCCAACCCAAAAATTGGCG+TGG | + | chr8_3:34722412-34722431 | Msa1286570:intron | 55.0% | |
! | CCCGTGCCACGCCAATTTTT+GGG | - | chr8_3:34722421-34722440 | None:intergenic | 55.0% |
CCCAAAAATTGGCGTGGCAC+GGG | + | chr8_3:34722418-34722437 | Msa1286570:intron | 55.0% | |
! | TCCCGTGCCACGCCAATTTT+TGG | - | chr8_3:34722422-34722441 | None:intergenic | 55.0% |
! | AGCCGATGGTGCTGAACGTA+AGG | + | chr8_3:34723354-34723373 | Msa1286570:CDS | 55.0% |
GCACATTTCCACCCAGATGG+AGG | - | chr8_3:34723466-34723485 | None:intergenic | 55.0% | |
ACTGCTGATCTGGAAGCAGC+AGG | + | chr8_3:34723640-34723659 | Msa1286570:CDS | 55.0% | |
GTGAGGAGGGATACAGTGGT+TGG | + | chr8_3:34724157-34724176 | Msa1286570:intron | 55.0% | |
CCAGCAAACAAGGGTCCAAC+AGG | - | chr8_3:34724749-34724768 | None:intergenic | 55.0% | |
! | CCTGTTGGACCCTTGTTTGC+TGG | + | chr8_3:34724746-34724765 | Msa1286570:intron | 55.0% |
GGCGCGGCCAACCCAAAAAT+TGG | + | chr8_3:34722407-34722426 | Msa1286570:intron | 60.0% | |
!!! | CGTAGCGGGCGCTATTTTGG+TGG | + | chr8_3:34722450-34722469 | Msa1286570:intron | 60.0% |
!!! | CGGGCGCTATTTTGGTGGTG+TGG | + | chr8_3:34722455-34722474 | Msa1286570:intron | 60.0% |
! | GCGCGTGTCAGAAGTGCAAG+TGG | - | chr8_3:34722689-34722708 | None:intergenic | 60.0% |
ACTTCTGACACGCGCCAACG+CGG | + | chr8_3:34722694-34722713 | Msa1286570:intron | 60.0% | |
AAAATACGGACCACCGCCCC+AGG | - | chr8_3:34722720-34722739 | None:intergenic | 60.0% | |
TCCGCTACGCTCCGCTATAG+CGG | + | chr8_3:34722740-34722759 | Msa1286570:intron | 60.0% | |
GTTCTCAAAGGCAACCGCGC+CGG | - | chr8_3:34722766-34722785 | None:intergenic | 60.0% | |
GGAGCAACTTGCAGCTTGGG+CGG | + | chr8_3:34723375-34723394 | Msa1286570:CDS | 60.0% | |
CCTGCACAGAGTGGGACGTA+CGG | + | chr8_3:34723960-34723979 | Msa1286570:intron | 60.0% | |
CTGCACAGAGTGGGACGTAC+GGG | + | chr8_3:34723961-34723980 | Msa1286570:intron | 60.0% | |
AGAGTGGGACGTACGGGTGT+GGG | + | chr8_3:34723967-34723986 | Msa1286570:intron | 60.0% | |
TCAAGGGCCGTGTCCCATGA+AGG | - | chr8_3:34724616-34724635 | None:intergenic | 60.0% | |
! | TGTGGAAATGCGGCTCGGCG+CGG | + | chr8_3:34722391-34722410 | Msa1286570:intron | 65.0% |
AATTGGCGTGGCACGGGAGC+AGG | + | chr8_3:34722424-34722443 | Msa1286570:intron | 65.0% | |
ATTGGCGTGGCACGGGAGCA+GGG | + | chr8_3:34722425-34722444 | Msa1286570:intron | 65.0% | |
!!! | GCGCGTAGCGGGCGCTATTT+TGG | + | chr8_3:34722447-34722466 | Msa1286570:intron | 65.0% |
! | GCCGCTATAGCGGAGCGTAG+CGG | - | chr8_3:34722744-34722763 | None:intergenic | 65.0% |
CTACGCTCCGCTATAGCGGC+CGG | + | chr8_3:34722744-34722763 | Msa1286570:intron | 65.0% | |
CCGTACGTCCCACTCTGTGC+AGG | - | chr8_3:34723963-34723982 | None:intergenic | 65.0% | |
CAGAGTGGGACGTACGGGTG+TGG | + | chr8_3:34723966-34723985 | Msa1286570:intron | 65.0% | |
GAGTGGGACGTACGGGTGTG+GGG | + | chr8_3:34723968-34723987 | Msa1286570:intron | 65.0% | |
! | AACCGCGCCGGCCGCTATAG+CGG | - | chr8_3:34722754-34722773 | None:intergenic | 70.0% |
CACGGGAGCAGGGCGCGTAG+CGG | + | chr8_3:34722435-34722454 | Msa1286570:intron | 75.0% | |
ACGGGAGCAGGGCGCGTAGC+GGG | + | chr8_3:34722436-34722455 | Msa1286570:intron | 75.0% | |
TGACACGCGCCAACGCGGCC+TGG | + | chr8_3:34722699-34722718 | Msa1286570:intron | 75.0% | |
GACACGCGCCAACGCGGCCT+GGG | + | chr8_3:34722700-34722719 | Msa1286570:intron | 75.0% | |
ACACGCGCCAACGCGGCCTG+GGG | + | chr8_3:34722701-34722720 | Msa1286570:intron | 75.0% | |
CTCCGCTATAGCGGCCGGCG+CGG | + | chr8_3:34722749-34722768 | Msa1286570:intron | 75.0% | |
! | ACCACCGCCCCAGGCCGCGT+TGG | - | chr8_3:34722711-34722730 | None:intergenic | 80.0% |
! | CGCGCCAACGCGGCCTGGGG+CGG | + | chr8_3:34722704-34722723 | Msa1286570:intron | 85.0% |
! | GCCAACGCGGCCTGGGGCGG+TGG | + | chr8_3:34722707-34722726 | Msa1286570:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 34720886 | 34725334 | 34720886 | ID=Msa1286570;Name=Msa1286570 |
chr8_3 | mRNA | 34720886 | 34725334 | 34720886 | ID=Msa1286570-mRNA-1;Parent=Msa1286570;Name=Msa1286570-mRNA-1;_AED=0.03;_eAED=0.03;_QI=53|1|1|1|1|1|6|17|321 |
chr8_3 | exon | 34720886 | 34721049 | 34720886 | ID=Msa1286570-mRNA-1:exon:10329;Parent=Msa1286570-mRNA-1 |
chr8_3 | exon | 34721380 | 34721551 | 34721380 | ID=Msa1286570-mRNA-1:exon:10330;Parent=Msa1286570-mRNA-1 |
chr8_3 | exon | 34723072 | 34723184 | 34723072 | ID=Msa1286570-mRNA-1:exon:10331;Parent=Msa1286570-mRNA-1 |
chr8_3 | exon | 34723325 | 34723661 | 34723325 | ID=Msa1286570-mRNA-1:exon:10332;Parent=Msa1286570-mRNA-1 |
chr8_3 | exon | 34724487 | 34724581 | 34724487 | ID=Msa1286570-mRNA-1:exon:10333;Parent=Msa1286570-mRNA-1 |
chr8_3 | exon | 34725180 | 34725334 | 34725180 | ID=Msa1286570-mRNA-1:exon:10334;Parent=Msa1286570-mRNA-1 |
chr8_3 | five_prime_UTR | 34720886 | 34720938 | 34720886 | ID=Msa1286570-mRNA-1:five_prime_utr;Parent=Msa1286570-mRNA-1 |
chr8_3 | CDS | 34720939 | 34721049 | 34720939 | ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1 |
chr8_3 | CDS | 34721380 | 34721551 | 34721380 | ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1 |
chr8_3 | CDS | 34723072 | 34723184 | 34723072 | ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1 |
chr8_3 | CDS | 34723325 | 34723661 | 34723325 | ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1 |
chr8_3 | CDS | 34724487 | 34724581 | 34724487 | ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1 |
chr8_3 | CDS | 34725180 | 34725317 | 34725180 | ID=Msa1286570-mRNA-1:cds;Parent=Msa1286570-mRNA-1 |
chr8_3 | three_prime_UTR | 34725318 | 34725334 | 34725318 | ID=Msa1286570-mRNA-1:three_prime_utr;Parent=Msa1286570-mRNA-1 |
Gene Sequence |
Protein sequence |